Activity
From 11/22/2020 to 12/21/2020
12/21/2020
- 11:39 PM bug #9362 (New): Convert Team to Person and vice versa saves immediately
- When converting a team to a person or converting a person to a team the operation is immediately executed and not wai...
- 11:32 PM feature request #4908 (Closed): adding convert Team to Person and Person to Team to the bulk editor
- Open issues fixed or moved to new ticket.
- 11:32 PM Revision b07820f4 (taxeditor): ref #4908 adapt error message for MergeException
- 11:31 PM Revision 01f597fe (cdmlib): ref #4770, ref #4908 add test for person is null in person2Team converter
- 11:27 PM feature request #9361 (New): Give more specific information why person can not be converted to team
- copied from #4908 and #4896 (says that current implementation is only a workaround as a suitable return type for isMe...
- 11:09 PM Revision 58a9c0ab (cdmlib): ref #4770, ref #4908 handle person is null in person2Team converter
- 10:46 PM feature request #4770 (Closed): Allow convert person to team
- the open issue is fixed now. We can close the ticket
- 10:45 PM Revision d7943997 (cdmlib): ref #4770 handle unprotected titlecache for person2Team converter and some finetuning for empty persons
- 10:39 PM Revision a7cbfd9c (cdmlib): ref #4770 fix clone for AgentBase.contact
- 10:38 PM Revision f3a14906 (cdmlib): cleanup
- 03:15 PM Revision 2e9c058b (cdmlib): cleanup
- 03:14 PM Revision 2b772077 (cdmlib): ref #4770 fix handling nomenclatural title for convertPerson2Team
- 03:00 PM Revision 94722700 (cdmlib): improve generics for save() method
- 02:59 PM Revision c9b75310 (cdmlib): cleanup
- 01:44 PM Revision 180577bd (taxeditor): ref #4908 adapt German menu label
- 01:36 PM feature request #4769 (Closed): Allow convert team to person
- I used this intensively for deduplicating authors in cyprus DB and problems never occured. So I guess we can close th...
- 01:26 PM bug #9360 (Feedback): Parsed hybrids can not be persisted
- In Flora of Cyprus I tried to persist a hybrid formula (Aegilops biuncialis × geniculata) but got an NPE in TaxonName...
12/18/2020
- 11:38 PM feature request #7894 (Closed): [CHECK] Import sourceNumber as Identifier for references
- As ERS did not complain about missing numbers during the last 1.5 years I guess everything went well.
- 11:37 PM feature request #7800 (Closed): Parse preliminary RefDetails
- As the import did run and most of the above RefDetails were parsed I think we can close this ticket. However, there a...
- 11:18 PM feature request #9204 (Closed): Update cdmlib and taxeditor dependencies
- I close this ticket as related to v5.18 and open a new one for the remaining (and new) issues
- 11:17 PM task #9359 (Closed): Update cdmlib, taxeditor, cdmserver etc. dependencies
- A lot of version updates and updates to how dependencies are handled in TaxEditor has been done already in #9204.
... - 11:13 PM task #9208 (Closed): Move cdmlib-print and cdmib-remote to taxeditor.printpublisher
- I think we can close this ticket.
There is a very important follow up ticket #9351 (assigned to AK) that needs to ... - 11:04 PM bug #9354 (Feedback): Sorting in distribution editor is broken
- There are still open issues as the comparator does not follow the comparator contract and handling of names with rank...
- 10:55 PM feature request #6076: Specimen biocase search should work on observations
- What needs to be done to close this ticket?
Is it for review? If yes, how to review? Which search did not work? In T... - 10:44 PM feature request #7262 (Closed): add progress monitor to csv print export and cdm light export
- Looks like this is fixed (I did not check for CSV export as it is not so relevant anymore)
- 10:34 PM bug #7013 (Closed): NonUniqueObjectException for setSecundumReferenceForSubtree
- As far as I know and have tried this works now. Also the progress monitor seems to work again. Therefore I close the ...
- 10:33 PM Revision 2f7a80f7 (taxeditor): ref #9349 adapt TaxEditor to method move for cloneSubtree - try to fix compile errors
- 10:26 PM Revision 863c4112 (taxeditor): ref #9349 adapt TaxEditor to method move for cloneSubtree
- 10:25 PM Revision 14ac3831 (taxeditor): cleanup
- 10:06 PM bug #7098 (Closed): reuse name does not work
- The method has been fully refactored in the meanwhile so I guess the above question is not relevant anymore. Closing ...
- 09:57 PM Revision cd0bfb6e (cdmlib): try to fix failing test in suite (cont.)
- 09:32 PM Revision 5c696121 (cdmlib): ref #9349 add doRecursive to subtreeCloning
- 09:29 PM Revision 71f6ac57 (cdmlib): cleanup
- 09:29 PM Revision d1198615 (cdmlib): try to fix failing test in suite (cont.)
- 08:51 PM Revision 34140e24 (cdmlib): ref #9349 rename newClassificationName method (cont.)
- 08:48 PM Revision 1b873fea (cdmlib): try to fix failing test in suite
- 08:47 PM Revision 0120e292 (cdmlib): ref #9349 rename newClassificationName method
- 08:47 PM Revision 60617880 (cdmlib): cleanup
- 08:37 PM Revision 2da76eb1 (cdmlib): ref #9349 fix test for nomenclaturalStatus in name cloning
- 08:20 PM Revision e9612b75 (cdmlib): ref #9349 deprecate setReuseNames(false)
- 08:19 PM Revision c5bb8419 (cdmlib): ref #9349 move cloneSubtree to taxonNodeService
- 08:18 PM Revision 77c5bf22 (cdmlib): remove deprecated methods from classificationService
- 08:17 PM Revision 6077af92 (cdmlib): cleanup
- 07:41 PM feature request #4867 (Feedback): Add menu item for subtree cloning
- It seems that the menu entry was removed or does not work anymore, even with experimental features being switched on....
- 07:25 PM task #9228: Adaptations to allow editing Centaurea in Flora of Greece
- After running the import it became clear that not reusing names is not a good idea as
* handling name relationship... - 07:03 PM Revision dcd42a41 (cdmlib): ref #9349 improve name cloning (including documentation as name cloning is not straight forward)
- 05:52 PM bug #9358: OptionalDataException during HTTP invoker call
- If it is true that this problem occurs client side we should catch the exception in a way that it becomes clear that ...
- 04:28 PM bug #9358: OptionalDataException during HTTP invoker call
- Same issue but slightly different stacktrace
~~~
last remote method : http://api.cybertaxonomy.org:80/euromed/rem... - 04:27 PM bug #9358: OptionalDataException during HTTP invoker call
- ERS: Das könnte sein. Ich habe auf meinem Rechner zuhause manchmal tatsächlich Kapazitätsprobleme - Ich werde das mal...
- 04:20 PM bug #9358: OptionalDataException during HTTP invoker call
- Lazy initializing distributions.
~~~
at org.hibernate.proxy.pojo.javassist.JavassistLazyInitializ... - 04:11 PM bug #9358: OptionalDataException during HTTP invoker call
- ~~~
last remote method : http://api.cybertaxonomy.org:80/euromed/remoting/common.service
last remote request client... - 04:11 PM bug #9358 (New): OptionalDataException during HTTP invoker call
- Note: first issue to solve is catching the exception client side as explained in comment 6 => #9629
The bug in com... - 12:02 PM Revision 239cf764 (cdmlib): cleanup
- 12:01 PM Revision 1b50bc76 (cdmlib): move model comparators to own package
- 11:25 AM bug #9142: The Agent search dialog shows duplicated entries
- Andreas Müller wrote:
> Thats what I thought. It is actually not really a wrong implementation of the method but due... - 11:14 AM bug #9142 (Feedback): The Agent search dialog shows duplicated entries
- Thats what I thought. It is actually not really a wrong implementation of the method but due to the above described s...
- 10:54 AM bug #9142 (Resolved): The Agent search dialog shows duplicated entries
- First I thought it was because the search method was called twice but the real cause was the wrong implementation of ...
- 11:24 AM Revision 84e04ed3 (cdmlib): ref #9142: use clazz for FROM statement in getUuidAndAbbrevTitleCache for agents
- 11:11 AM bug #9264: Flag for toggle button for linking taxon with navigator looses/switch value without clicking the button
- please review
- 10:59 AM bug #9264 (Resolved): Flag for toggle button for linking taxon with navigator looses/switch value without clicking the button
- Applied in changeset commit:taxeditor|d3334540d33466758ed37e2c7648f74f99420f43.
- 10:50 AM Revision f0cf9026 (cdmlib): ref #9142: fix getUuidAndAbbrevTitleCache for agents
- 10:18 AM Revision d3334540 (taxeditor): fix #9264: use eventbus for updating link with taxon
12/17/2020
- 08:11 PM Revision b7f8c9d4 (taxeditor): Merge branch 'hotfix/5.18.2'
- 07:53 PM Revision 34753cbb (taxeditor): remove cdmlib-remote-webapp.war from git in hotfix branch
- (cherry picked from commit e8d037bd184f407b89f09df7d93155119480d7b1)
- 07:52 PM Revision 840605a4 (taxeditor): fix NPE for cloned lectotype typedesignations
- (cherry picked from commit 11c7cb1711a7ed2dc828b81318fcaf34e34a3ef9)
- 07:14 PM Revision 45c8cb20 (taxeditor): Updated version in pom / project files to taxeditor version : 5.18.2 and cdmlib version : 5.18.0
- 04:08 PM Revision e8d037bd (taxeditor): remove cdmlib-remote-webapp.war from git in hotfix branch
- 03:50 PM Revision 5b06a013 (taxeditor): Merge branch 'hotfix/5.18.1'
- 03:40 PM Revision 7bc7988e (taxeditor): remove cdmlib-remote-webapp.war from git
- 11:49 AM bug #9142 (Feedback): The Agent search dialog shows duplicated entries
- 11:39 AM bug #9142: The Agent search dialog shows duplicated entries
- can you shortly explain what the problem was and why the commit fixes it?
- 11:36 AM bug #9142: The Agent search dialog shows duplicated entries
- Applied in changeset commit:taxeditor|359b77dda6efc328563cfd93e63aee841662b4e7.
- 11:30 AM bug #9142 (Resolved): The Agent search dialog shows duplicated entries
- This should be fixed. Please review.
- 11:35 AM Revision 359b77dd (taxeditor): fix #9142: fix doubled entries in agent selection dialog
- 10:35 AM Revision 59066f6b (taxeditor): adapt SpringSource GA Repository to https
- 10:34 AM feature request #9337: Open issues for reimplementation of termtree editors
- 16. Add "Open in Vocabulary" to term tree editor context menu; this is generally needed the primary usecase is to all...
- 09:16 AM feature request #9337 (In Progress): Open issues for reimplementation of termtree editors
- 10:10 AM feature request #8289 (Resolved): Add "Open in RefObj view" to term editor context menu
- please review.
- 10:09 AM Revision dc2e648b (taxeditor): ref #8289: add open in to term editor context menu
- 09:13 AM bug #9344: Datasets in Descriptive Dataset Navigator should be ordered
- please review
- 09:13 AM bug #9344 (Resolved): Datasets in Descriptive Dataset Navigator should be ordered
- Applied in changeset commit:taxeditor|b5f32b5d274ff26e8bf15ed9f42c61f028e79584.
- 09:13 AM Revision b5f32b5d (taxeditor): fix #9344: add comparator to descriptive dataset navigator
- 08:48 AM bug #9353 (Resolved): Copy & Paste creates dirty data in term trees
- Applied in changeset commit:taxeditor|27ca515332a1068e6f49ccff9a4466bce556a548.
- 08:48 AM Revision 27ca5153 (taxeditor): fix #9353: fix c&p in term trees
12/16/2020
- 04:29 PM Revision 9c9bb6b3 (taxeditor): remove doubled is
- 04:17 PM Revision 63fd9baa (taxeditor): rename labels for DDS navigator
- 04:13 PM Revision c34d4827 (taxeditor): open in of nomencl.source for the sourced name
- 03:16 PM Revision 25cc3cf4 (taxeditor): adapt DescriptionHelper for refObjects description of nomclat. sources
- 03:02 PM Revision b63ed015 (taxeditor): fix NPE for cloned lectotype typedesignations
- 03:01 PM Revision 11c7cb17 (taxeditor): fix NPE for cloned lectotype typedesignations
- 09:46 AM Revision 4e3c1b39 (taxeditor): remove error message for MAN without sec
- 09:44 AM Revision cca35f36 (taxeditor): do not expand the server side preferences
12/15/2020
- 12:43 PM Revision ea6ec182 (taxeditor): ref #9337: remove obsolete part descriptions
- 12:40 PM Revision f6ba2ccb (taxeditor): ref 9337: rename all termtree related classes
- 11:36 AM feature request #9338 (Resolved): Restructure term menus
- Both menues have the same structure and also the handling of opening the editors are synchronized.
- 11:33 AM Revision 22ac94a9 (taxeditor): ref #9338: restructure term menues and adapt handling
12/14/2020
- 10:44 AM Revision 38018d82 (cdmlib): fix import of dna data with different provider software version
12/11/2020
- 11:13 AM Revision 2cb343b3 (taxeditor): adapt path to cdmlib-remote-webapp.war from webapp to local
- 10:57 AM Revision 849c20bf (taxeditor): fix cdmlib-print and cdmlib-remote for hotfix 5.18.1
- 10:02 AM Revision 56cf64f7 (taxeditor): ref #9356: hotfix solution
- 09:48 AM Revision 40d48f6f (taxeditor): ref #9356: hotfix solution
- 08:20 AM bug #9357 (New): Advanced search shows selection for all classification even if only 1 classification is available for a dataportal
- In the flora of Greece dataportaal only the classification "Vascualar plants of Greece" should be shown
: minor
- 10:41 PM Revision b8ddc6c3 (cdmlib-apps): update cdmlib-app to v5.19.0
- 03:29 PM bug #9356 (In Progress): Comparison method violates its general contract for SourceComparator and TypeDesignationComparator
- 02:02 PM bug #9356 (Closed): Comparison method violates its general contract for SourceComparator and TypeDesignationComparator
- There are two comparators violating the contract: SourceComparator in taxeditor and typeDesignationComparator in cdml...
- 01:26 PM bug #9350 (Resolved): Create new taxonnode ignores the publish flag
- yes, this is resolved and the workaround removed.
- 12:51 PM bug #9350 (In Progress): Create new taxonnode ignores the publish flag
- is this resolved and open for review (the develop version)?
- 01:21 PM Revision eb3f9882 (taxeditor): ref #9350: fix is implemented in cdmlib therefore we can remove the workaround in taxeditor
- 12:59 PM bug #9355 (New): Selection dialog for secundum reference does not work correctly
- mail NK:
ich kann keine neue sec. Referenz mehr auswählen, ohne vorher die bereits vorhandene zu löschen. Ich bin ... - 11:32 AM Revision a3d9156f (taxeditor): cleanup
- 11:28 AM Revision 9360e6f2 (taxeditor): cleanup
12/09/2020
- 04:06 PM bug #9354 (Resolved): Sorting in distribution editor is broken
- fixed for hotfix 5.18.1
- 04:05 PM bug #9354 (Closed): Sorting in distribution editor is broken
- The comparator for sorting the taxa in distribution editor does not work correctly.
- 04:04 PM bug #9353 (Closed): Copy & Paste creates dirty data in term trees
- It was missed to implement copy & paste for the dto implementation of the term tree editors, the menu items are still...
- 10:24 AM Revision 6b6ae919 (taxeditor): fix distribution editor comparator
- 10:02 AM Revision f34ce847 (taxeditor): fix distribution editor comparator
12/08/2020
- 01:51 PM bug #9352 (New): Missing order in quantitative data wizard
- mail AM:
bei Eingabe von QantData scheint mir die Reihenfolge der Felder etwas beliebig. Kann man das evtl. fest v... - 12:55 PM feature request #9002: Find suitable symbols for excluded, unplaced, placement doubtful
- WGB:
die Lösung für dieses Ticket hängt von der breiteren Diskussion dieser Kategorien und ihrer Verbindung mit de... - 12:52 PM bug #8971: Long running tasks in taxon navigator should disable the navigator
- WGB:
hier nur nochmal die Bestätigung, dass das ein an verschiedenen Stellen auftretendes Problem ist, besonders, ... - 10:56 AM Revision 3c793992 (taxeditor): ref #9199: fix missing handling of name in source in nomenclatural source
- 10:52 AM Revision af6adc60 (taxeditor): ref #9199: fix missing handling of name in source in nomenclatural source
- 08:37 AM bug #9351 (Closed): Include new locations for cdmlib-print and cdmlib-remote in jenkins release script
- cdmlib-print and cdmlib-remote are now only available in taxeditor.printpublisher.
Therefore the according links t...
12/07/2020
- 11:16 PM Revision 12490f6a (taxeditor): cleanup
- 11:16 PM Revision e62fc33a (taxeditor): remove cdmlib-remote from local (to test if it is needed at all there)
- 11:16 PM Revision b67648cb (taxeditor): upgrade cdmlib-print and cdmlib-remote to 5.19-Snapshot in printpublisher
- 11:16 PM Revision b4221bf3 (taxeditor): again add remote-webapp-war to gitignore
- 12:15 PM bug #9350: Create new taxonnode ignores the publish flag
- implemented a workaround for hotfix 5.18.1 in editor, this should be removed for the next release. The correct fix co...
- 12:12 PM bug #9350 (Closed): Create new taxonnode ignores the publish flag
- Creating a new taxon node and do not set the publish flag is not taken for the newly created taxon.
- 12:09 PM Revision d4de1459 (taxeditor): workaround for missing publish flag in newTaxonNode
- 12:06 PM Revision a3509fe0 (taxeditor): workaround for missing publish flag in newTaxonNode
- 11:55 AM Revision ac6fd8fc (cdmlib): fix missing publish flag in createTaxonnode
12/05/2020
- 01:43 PM bug #6488 (Closed): Always show some label text in the specimen editor even when no information is available
- This seems to be fixed as it did not appear anymore. Open new ticket if something similar happens again.
- 01:42 PM bug #4330: Correct handling of nomenclatural inreferences of Journals
- not yet fixed therefore I move it to current milestone
- 01:39 PM bug #1924: CIHORIEAE in-references in Footnotes
- This is still open therefore I move it to current milestone
- 01:38 PM bug #2969: Correct formatting for bibliographic references
- This is not yet fixed therefore I move it to current milestone.
- 01:27 PM feature request #7334 (Closed): Make pro parte and partial synonyms real concept relationships
- This is in use now for longer time and no errors were reported, so I guess we can close it.
- 01:22 PM feature request #5396: User interface to create a Remote Source
- moving all open remoting 6.0 tickets to Unassigned
- 01:21 PM feature request #5366: Implement less strict check for compatibility between taxeditor and target cdmserver
- moving all open remoting 6.0 tickets to Unassigned
- 01:20 PM feature request #5356: Handle exceptions which require reconnect
- moving this open remoting 6.0 ticket to current milestone to decide what to do with it.
Is the above mentioned sol... - 01:18 PM feature request #5020: [MASTER] Refactor / Redesign
- moving this open remoting 6.0 ticket to current milestone as we have to decide what to do with it (to me it is unclear)
- 01:16 PM feature request #4931: [Master] Fix Performance Issues
- moving this open remoting 6.0 tickets to Reviewed Next Major Release as subtickets are also there
- 01:11 PM feature request #4930: Implement Tests for Bulk Editor
- moving all open remoting 6.0 tickets to Unassigned
- 01:11 PM feature request #4929: Implement Tests for Polytomous Key Node Editor
- moving all open remoting 6.0 tickets to Unassigned
- 01:10 PM feature request #4074: [MASTER] Setup testing framework for remoting
- moving all open remoting 6.0 tickets to Unassigned
- 01:09 PM feature request #4021: H2 running in Server mode
- moving all open remoting 6.0 tickets to Unassigned
- 12:57 PM feature request #5794 (Resolved): Move other invalid names to the end
- Needs to be checked against new implementations within #9272 and #9282 , does comparator work accordingly. Also add d...
- 12:51 PM bug #9311 (Closed): Update some (abbrev) labels for nomenclatural status types
- 11:13 AM Revision d4511e7d (cdmlib): cleanup
- 11:13 AM Revision 1d8d7a2f (cdmlib): remmove potential NPE in TermNode.toString
- 10:55 AM Revision 5fc450f7 (cdmlib): cleanup
- 09:37 AM Revision e819af3f (cdmlib-apps): Update BgbmInstancesUpdater to new production instances
- 09:36 AM Revision a1205648 (cdmlib-apps): move country methods to term service in SynthesysCacheActivator
12/04/2020
- 05:59 PM Revision 2190c91b (taxeditor): fix wrong dependency to 5.18.0 snapshot version in printpublisher and local
- 04:47 PM bug #9347: LIE during ABCD file import
- This should be fixed soon.
- 03:32 PM bug #9347 (New): LIE during ABCD file import
- File imported: attachment:Kurs-19_20_Herbar.xml
~~~~
++++++++Import Report+++++++++
Specimens created: 0
Skippe... - 04:35 PM feature request #4866 (Closed): Implement clone method for complete classifications
- This is implemented so far (tested for Centaurea/FoG on command line) with some open issues.
- 04:33 PM bug #9349 (New): Open issues for classification cloning
- * "Import Result" including count cloned taxa, synonyms, names, ... (do we need to merge UpdateResult and ImportResul...
- 04:21 PM feature request #9320 (In Progress): Move additional publication information to nomenclatural source
- 04:11 PM task #9315 (In Progress): Remove old single source citation and microCitation columns
- 04:11 PM feature request #9327 (In Progress): Make taxon secundum reference an original source
- 04:10 PM bug #8141: explicitSource as additional attribute for TypeDesignationStatus
- not so high priority as long as TypeDesignationStatus vocabularies can not be edited
- 03:50 PM bug #9348 (New): Specimen online import dialog issues
- 1. The dialog has extrem width (at least in the KDE desktop environment) this seems to come from the widht of the com...
- 03:00 PM bug #9264: Flag for toggle button for linking taxon with navigator looses/switch value without clicking the button
- I hope this is fast to fix, therefore I move it to 5.19
- 02:55 PM feature request #9192: Layout issues for source in taxonnode details
- If close, please move it back to 5.18
- 02:55 PM feature request #9192: Layout issues for source in taxonnode details
- This to me looks fine now. Maybe we could have a bit more space above "Related persons or teams if the "more" section...
- 02:48 PM bug #9073: Configuring the matrix view throws HTTP invoker exception
- When testing this I got another exception (NPE) during save:
~~~
last remote method : http://test.e-taxonomy.eu:8... - 02:45 PM bug #9245 (Feedback): Creating derived units from existing derived unit is not possible in specimen tree editor
- This to me seems to be fixed. Katja can you check, and if true add commit and correct target version?
- 02:23 PM bug #9346: Adding specimen to character matrix fails sometimes
- The Problem occurred with unit ID 433 in rem_conf_am (Dianthella test Node; Germany, Berlin (MC 67)).
- 01:32 PM bug #9346 (Closed): Adding specimen to character matrix fails sometimes
- There are two issues:
1. the SourceDTO is not serializable
2. LIE
~~~ text
ENTRY org.eclipse.e4.ui.workbench... - 02:10 PM bug #8660 (Duplicate): Generic menu creation for Term trees
- I think this is a duplicate for #9338 though the focus how to implement it has changed.
- 02:09 PM Revision b4323390 (taxeditor): Revert "Updated version in pom / project files to taxeditor version : 5.13.1 and cdmlib version : 5.13.0"
- This reverts commit bc421a42016f0e20f65ad9f2cc818899b53508e0.
- 02:09 PM feature request #9338: Restructure term menus
- This ticket seems to be somehow contradictory to #8660. However, currently I think a menu not automatically created i...
- 01:54 PM Revision b1eecb5d (taxeditor): add import
- 01:50 PM Revision 279a5b72 (taxeditor): missed to commit adapted manifest
- 01:34 PM Revision 5a1563c0 (taxeditor): avoid NPE when using new node as parent for d&d
- 12:58 PM bug #9345 (New): Prevent or warn about unparsable values when entering quantitative data
- Currently when entering e.g. "2,3" and pressing OK, the data is not stored but also no warning is given that it is p...
- 11:51 AM Revision aaea7d8a (taxeditor): Revert "avoid NPE when using new node as parent for d&d"
- This reverts commit 64dd32e955f33805399bc2b70b2f6bc14c12d4a0.
- 11:51 AM Revision 2c2faa69 (taxeditor): avoid NPE when using new node as parent for d&d
- 11:49 AM Revision 09e63d7a (taxeditor): fix problem with last selected references
- 11:48 AM bug #9344 (Closed): Datasets in Descriptive Dataset Navigator should be ordered
- ... alphabetically
Currently they seem to be unordered.
- 11:47 AM Revision bc421a42 (taxeditor): Updated version in pom / project files to taxeditor version : 5.13.1 and cdmlib version : 5.13.0
- 11:09 AM feature request #8554 (Feedback): Allow drag&drop from character into FeatureTrees
- this is probably a duplicate for #8774/#9337 (issues 4 and 5)?
- 10:58 AM Revision 64dd32e9 (taxeditor): avoid NPE when using new node as parent for d&d
- 10:03 AM bug #7990 (Closed): Moving a feature via d&d does not make the Feature Tree Editor dirty
- ups no, this issue is solved with the new implementation.
- 10:01 AM bug #7990 (Feedback): Moving a feature via d&d does not make the Feature Tree Editor dirty
- Is this still an open issue with the new term tree implementation? If not we should close it as works for me or as du...
- 09:34 AM Revision 028014b6 (taxeditor): Updated version in pom / project files to taxeditor version : 5.18.1 and cdmlib version : 5.18.0
12/03/2020
- 09:34 PM Revision 113e67ef (taxeditor): Merge branch 'release/5.18.0' into develop
- 09:34 PM Revision 5155769b (taxeditor): Merge branch 'release/5.18.0'
- 08:54 PM Revision c654b140 (cdm-server): Merge branch 'release/5.18.0' into develop
- 08:54 PM Revision 51596a1b (cdm-server): jenkins merging release branch into master (strategy: theirs)
- 08:53 PM Revision f0a436fd (cdm-server): updating poms for branch'release/5.18.0' with non-snapshot versions
- 08:52 PM Revision 345bcff8 (cdm-webapp): Merge branch 'release/5.18.0' into develop
- 08:52 PM Revision d9a3e77e (cdm-webapp): jenkins merging release branch into master (strategy: theirs)
- 08:51 PM Revision a08a9f9c (cdm-webapp): updating poms for branch'release/5.18.0' with non-snapshot versions
- 08:51 PM Revision 8eb6f658 (cdm-webapp): jenkins bumping cdmlib.version and cdm.vaadin.version to 5.18.0
- 08:47 PM Revision c7e0b908 (cdm-dataportal): Merge branch 'release/5.18.0' into develop
- 08:47 PM Revision 6b7f29c7 (cdm-dataportal): updating poms for branch'release/5.18.0' with non-snapshot versions
- 08:47 PM Revision d2962586 (cdm-dataportal): release-preparation: production level css
- 08:47 PM Revision 9ed2ff7f (cdm-vaadin): Merge branch 'release/5.18.0' into develop
- 08:47 PM Revision 9251885f (cdm-vaadin): jenkins merging release branch into master (strategy: theirs)
- 08:43 PM Revision 90094ee9 (cdm-vaadin): updating poms for branch'release/5.18.0' with non-snapshot versions
- 08:43 PM Revision 99fbbfaf (cdm-vaadin): jenkins bumping cdmlib.version to 5.18.0
- 08:28 PM bug #8774 (Closed): Reimplement term tree editors to implement the general save strategy
- I think we can close this ticket. All remaining issues will go into the follow up ticket #9337
- 02:00 PM bug #8774 (Resolved): Reimplement term tree editors to implement the general save strategy
- I move the expand of the tree after saving to the follow up ticket.
- 12:35 PM bug #8774: Reimplement term tree editors to implement the general save strategy
- The saving of the termtree editor before adding a new term is not necessary anymore, only moving a new term is not po...
- 11:26 AM bug #8774: Reimplement term tree editors to implement the general save strategy
- D&D on itself makes a node disappear and saving it creates a stackOverflow
- 11:23 AM bug #8774: Reimplement term tree editors to implement the general save strategy
- The tree should stay expanded when saving
- 08:26 PM feature request #8756 (Feedback): Refresh button for structure tree and property tree in Character Editor
- I tested again. It seems to work if the editing of the structure tree is done in the same TaxEditor instance or if th...
- 08:00 PM bug #9343 (Duplicate): Open issues for DTO based term tree & character editor
- upps, this is a duplicate of course for #9337. I moved all issues there
- 07:28 PM bug #9343 (Duplicate): Open issues for DTO based term tree & character editor
- copied from #8774
* tree collapses sometimes after save
* d&d from vocabulary editor to character editor not yet ... - 07:33 PM Revision af199beb (cdmlib): Updating develop poms back to pre merge state
- 07:33 PM Revision 638beb74 (cdmlib): Merge branch 'master' into develop
- 07:33 PM Revision 8c4580af (cdmlib): updating develop poms to master versions to avoid merge conflicts
- 07:33 PM Revision 27b8c645 (cdmlib): Merge branch 'release/5.18.0'
- 07:11 PM Revision 5bdde967 (cdmlib): updating poms for branch'release/5.18.0' with non-snapshot versions
- 06:48 PM Revision f3722b4a (cdm-webapp): jenkins bumping cdmlib.version and cdm.vaadin.version to 5.18.0-SNAPSHOT
- 06:47 PM Revision 6d43461a (cdm-webapp): updating poms for 5.19.0-SNAPSHOT development
- 06:47 PM Revision 66dbc081 (cdm-webapp): updating poms for 5.18.0 branch with snapshot versions
- 06:47 PM Revision 0e2580eb (cdm-webapp): jenkins bumping cdmlib.version and cdm.vaadin.version to 5.19.0-SNAPSHOT
- 06:30 PM bug #9267 (Closed): No sec reference for move change Synonym to accepted Taxon
- First version was implemented now.
I think we can close this ticket. All the rest will be done in the follow up ti... - 03:32 PM bug #9267: No sec reference for move change Synonym to accepted Taxon
- Now there is only a statement saying "The new taxon and the parent does not have the same secundum reference". But yo...
- 01:55 PM bug #9267: No sec reference for move change Synonym to accepted Taxon
- A "hot fix" version is implemented now. The new accepted taxon keeps the secundum reference of the former synonym and...
- 06:24 PM Revision 0b1617f5 (taxeditor): Updated version in pom / project files to taxeditor version : 5.19.0-SNAPSHOT and cdmlib version : 5.19.0-SNAPSHOT
- 06:24 PM Revision f28ad9fa (taxeditor): Updated version in pom / project files to taxeditor version : 5.18.0 and cdmlib version : 5.18.0
- 06:23 PM Revision 6b274bd6 (cdm-server): updating poms for 5.19.0-SNAPSHOT development
- 06:23 PM Revision 599dde48 (cdm-vaadin): jenkins bumping cdmlib.version to 5.18.0-SNAPSHOT
- 06:23 PM Revision 7e0d9ffd (cdm-dataportal): updating poms for 5.19.0-SNAPSHOT development
- 06:23 PM Revision 1ae1237f (cdm-vaadin): updating poms for 5.19.0-SNAPSHOT development
- 06:23 PM Revision 2e76afe1 (cdm-vaadin): updating poms for 5.18.0 branch with snapshot versions
- 06:23 PM Revision c0d8b571 (cdm-vaadin): jenkins bumping cdmlib.version to 5.19.0-SNAPSHOT
- 06:20 PM Revision 3a956fb6 (cdmlib): updating poms for 5.19.0-SNAPSHOT development
- 06:20 PM Revision 2f1c9deb (cdmlib): updating poms for 5.18.0 branch with snapshot versions
- 06:14 PM feature request #8529: [DISCUSS]Display of aggregated descriptions
- Norbert, can you have a look on this ticket if you remember what was meant?
- 06:09 PM bug #8874: move taxon is reverted when taxon is edited afterwards
- Katja, do you remember why this ticket was assigned to me? Simply a mistake?
Can we reproduce this behavior? - 05:52 PM bug #8547 (Closed): Default type of a newly created inReference should depend on the type of the reference
- This is fixed as far as now by default the most likely reference type is now prefilled for inreferences.
There is ... - 02:28 PM bug #8547: Default type of a newly created inReference should depend on the type of the reference
- ReferenceType.inReferenceContraints() is a list now, so the first element in the list is the default preferred type. ...
- 05:48 PM feature request #9342 (New): Only show specific reference types for inreferences
- copied from #8547
RefereceType.inReferenceContraints() returns the possible values available for an inreference. T... - 05:45 PM Revision 76ee473f (cdmlib): ref #8547 add inreference type for Proceedings
- 05:45 PM Revision 9f5a2d3a (cdmlib): throw exception when datasource could not be saved (instead of logging only)
- 05:44 PM Revision c58fbd18 (cdmlib): cleanup
- 05:39 PM bug #9199 (Closed): Adapt TaxEditor to switch to originalSource for remaining single sourced objects
- Works as expected. We can close this ticket.
- 03:31 PM bug #9199 (Resolved): Adapt TaxEditor to switch to originalSource for remaining single sourced objects
- Andreas Müller wrote:
> Andreas Müller wrote:
> > Andreas Müller wrote:
> > > ~~Another minor issue: could we move... - 03:13 PM bug #9199 (Feedback): Adapt TaxEditor to switch to originalSource for remaining single sourced objects
- 03:09 PM bug #9199: Adapt TaxEditor to switch to originalSource for remaining single sourced objects
- Andreas Müller wrote:
> Andreas Müller wrote:
> > ~~Another minor issue: could we move "Original Information" above... - 01:56 PM bug #9199 (Resolved): Adapt TaxEditor to switch to originalSource for remaining single sourced objects
- this should be solved with last commit.
- 05:25 PM Revision 8bdc7bb8 (taxeditor): ref #9267: warning message instead of confirm message box
- 05:21 PM task #9189 (Closed): Move datasource view to taxeditor.local
- This works now but there are still open issues to solve before all cdmlib-db stuff can fully migrate to taxeditor.loc...
- 05:20 PM feature request #9341 (New): Move local datasource access fully to taxeditor.local
- The datasource view has been migrated to taxeditor.local in #9189.
However, there is still a dependency to cdmlib-... - 05:19 PM Revision 49f27511 (taxeditor): ref #8774: only one message when trying to move new node
- 04:59 PM Revision 9f3ac470 (taxeditor): some doc
- 04:55 PM Revision 25082155 (taxeditor): ref 9189 add mchange-commons-java to MANIFEST
- 04:42 PM Revision d9f875da (taxeditor): minor
- 04:36 PM Revision 2fdfb0a3 (taxeditor): cleanup
- 04:36 PM Revision 88090686 (taxeditor): some gitignores
- 04:34 PM Revision 4228a4ef (taxeditor): ref 9189 add mchange-commons-java to dependency copy
- 03:36 PM feature request #9340 (Closed): Workflow support for secundum handling when making synonym a new accepted taxon
- copied from #9267
(1) check above ticket for remaining issues. Most important is to have a preference to handle th... - 03:26 PM Revision 5eabd2c1 (taxeditor): ref #9199: move original information behind name used in source
- 02:25 PM Revision 46418777 (cdm-vaadin): ref #8547 make ReferenceType.inReferenceContraints() a list (adapt vaadin)
- 02:23 PM Revision 2c0bb8e3 (cdmlib): ref #8547 make ReferenceType.inReferenceContraints() a list
- 01:55 PM task #6714: Create 001-cdm.h2.sql automatically
- This is more or less done in 5.18 except for the copying issue
- 01:35 PM Revision 91febabd (taxeditor): ref #8774: code cleaning
- 01:35 PM Revision e33f888a (taxeditor): ref #8774: label issues in character editor
- 01:09 PM Revision 427ed9f2 (taxeditor): ref #8774: label issues in character editor
- 12:26 PM Revision 81222649 (taxeditor): ref #8774: save is not necessary for creating new terms
- 12:01 PM Revision 4a70bee8 (cdm-dataportal): ref #8851 adapting test assertions to modified test data
- 10:53 AM Revision b15678f9 (taxeditor): ref #8774: change text for duplicates
- 10:40 AM Revision 4756075a (taxeditor): ref #8774: avoid d&d to child of the dropped node
12/02/2020
- 10:37 PM Revision 68aa76e0 (cdm-dataportal): ref #9322 changing test case for invalid designation to misapplied name
- 07:53 PM bug #8774: Reimplement term tree editors to implement the general save strategy
- The above also happens when D&D a NamedAreae from NamedArea Term Editor to NamedArea Term Tree Editor, so it is proba...
- 07:51 PM bug #8774: Reimplement term tree editors to implement the general save strategy
- D&D a NamedArea term from a NamedArea Tree Term Editor to an Rank Tree Term Editor leeds to the below NPE:
D&D wit... - 07:47 PM bug #8774: Reimplement term tree editors to implement the general save strategy
- D&d a term onto its own child makes both disappear in the UI. Saving this is one way to create the above StackOverflo...
- 07:38 PM bug #8774: Reimplement term tree editors to implement the general save strategy
- after moving some ranks around in the term editor I got the following when trying to save:
~~~
last remote method... - 01:11 PM bug #8774: Reimplement term tree editors to implement the general save strategy
- The text for duplicate recognition should be improved from
This term tree does not allow duplicates and there exi... - 01:00 PM bug #8774: Reimplement term tree editors to implement the general save strategy
- When changing a tree by e.g. changing a flag (order relevant) and then adding a term a message comes that the tree ne...
- 12:20 PM bug #8774: Reimplement term tree editors to implement the general save strategy
- ... this happens whereever I try to move the 3rd rank from position of being child of 2nd rank (but in the same sessi...
- 12:17 PM bug #8774 (Feedback): Reimplement term tree editors to implement the general save strategy
- AOOB with a rank tree with 3 top level children, first I moved 3rd rank to be child of 2nd rank, than I tried to move...
- 11:47 AM bug #8774 (Resolved): Reimplement term tree editors to implement the general save strategy
- I think all remaining issues are solved or moved to new tickets.
- 07:00 PM bug #9322 (Closed): Remove invalid designation taxon relationship
- 06:50 PM feature request #9282 (Closed): Add nomenclatural standing
- 06:28 PM Revision 387aef2a (taxeditor): ref #9199: layout issues and code cleaning
- 06:22 PM Revision 0eb2578c (cdmlib): ref #6591 handle also AUD table in SingleTermRemover for removing original spelling
- 06:21 PM Revision dcf6678d (cdmlib): cleanup
- 06:20 PM Revision e2d8dde3 (cdmlib): ref #9322 handle also AUD table in SingleTermRemover and connect the schema updater
- 05:19 PM Revision 1fa1f3de (cdmlib): cleanup
- 05:13 PM bug #9257: revise filtering in OccurrenceServiceImpl.assembleFieldUnitDTO(FieldUnit fieldUnit) by SpecimenOrObservationType.PreservedSpecimen
- Katja Luther wrote:
> Andreas Kohlbecker wrote:
> > Hi Katja & AM, the current implementation partially filters for... - 04:45 PM Revision 1c2b2e59 (cdmlib): move country methods to term service and some cleanup
- 04:31 PM feature request #9190 (In Progress): Make taxeditor.local a loadable plugin not installed by default
- 04:30 PM bug #9199: Adapt TaxEditor to switch to originalSource for remaining single sourced objects
- ... looks like the error appears at different places depending on the type field that you enter data in
- 04:28 PM bug #9199: Adapt TaxEditor to switch to originalSource for remaining single sourced objects
- Also the NPE still exists, but with a different row number:
~~~
last remote method : http://test.e-taxonomy.eu:80... - 04:25 PM bug #9199: Adapt TaxEditor to switch to originalSource for remaining single sourced objects
- Andreas Müller wrote:
> ~~Another minor issue: could we move "Original Information" above ID Namespace and ID in Sou... - 04:23 PM bug #9199 (Feedback): Adapt TaxEditor to switch to originalSource for remaining single sourced objects
- Andreas Müller wrote:
> Sometimes the nomenclatural source still shows "No external link" yet instead of no protolog... - 11:45 AM bug #9199 (Resolved): Adapt TaxEditor to switch to originalSource for remaining single sourced objects
- please review.
- 11:42 AM bug #9199: Adapt TaxEditor to switch to originalSource for remaining single sourced objects
- Andreas Müller wrote:
> NPE when editing a lectotype source
>
> ~~~
> last remote method : http://test.e-taxonom... - 04:15 PM Revision 7b2afc79 (cdmlib-apps): uncomment schema location in app-import pom (not sure why it was commented)
- 04:14 PM Revision a1c98b63 (cdmlib-apps): ref #9228 add CentaureaCloneActivator
- 04:12 PM Revision 11e38aae (cdmlib): ref #9228 , ref #4866 some fixes for subtree cloning
- 04:12 PM Revision 5d03f828 (cdmlib): cleanup
- 03:03 PM Revision 3385926d (cdmlib): ref #9267: set sec of new taxon to sec of synonym
- 03:01 PM Revision bb2b5493 (taxeditor): ref #9267: add message if sec of new taxon differs from sec of new parent
- 02:46 PM Revision e796e4aa (taxeditor): ref #9189: move new menu item to the top
- 02:42 PM task #9189: Move datasource view to taxeditor.local
- Katja Luther wrote:
> Andreas Müller wrote:
> > Katja Luther wrote:
> > > Andreas Müller wrote:
> > > > The "New"... - 02:27 PM Revision 3b11ede7 (taxeditor): avoid widget is disposed exception
- 02:06 PM Revision 21015b47 (taxeditor): ref #8774: fix AOOB Exception in termtree editor
- 02:05 PM bug #6356 (Closed): taxontree sort order as in editor
- Norbert wrote: "alles klar, gelöst!"
- 01:54 PM feature request #8308 (Worksforme): Extend specimen type designation editor
- 01:45 PM feature request #8308: Extend specimen type designation editor
- This ticket can be set to "worksforme".
The image issue raised is not what the screenshot here shows. I will comment... - 01:27 PM bug #9313 (Closed): LazyInitializationException (LIE) in TaxonNamePopupEditor
- 01:04 PM bug #9313: LazyInitializationException (LIE) in TaxonNamePopupEditor
- no problems with existing names (orthogr. variant, corrected name, species name, genus name) anymore. Ticket can be c...
- 12:54 PM Revision 0b429510 (cdm-dataportal): ref #9322 removing taxon relationship invalid designation from portal code
- 12:30 PM bug #8776 (In Progress): Open issues for TermCollection.allowDuplicates handling in TaxEditor
- 12:28 PM Revision ca0e1f12 (taxeditor): ref #4866, ref #9228 fix postgresql version number and add to gitignore
- 12:07 PM Revision 9306fdac (taxeditor): ref #4866, ref #9228 preliminary revert moving h2, postgresql and mysql from cdmlib to local and include mchange-commons-java in cdmlib
- 11:42 AM Revision d34bc6be (taxeditor): fix NPE in nameEditor
- 11:35 AM Revision bd5b538f (taxeditor): ref #9199: fix NPE for newly created designation source
- 11:35 AM Revision 0a20a617 (taxeditor): ref #9332: further clean up in editor
- 09:07 AM feature request #9339: Improve warning message if save is necessary
- We should do this soon
- 08:22 AM feature request #9339 (New): Improve warning message if save is necessary
- The actual warning message "The editor needs to be saved..." is misleading because normally only the active window is...
12/01/2020
- 08:45 PM Revision 77f6a14a (taxeditor): ref #4866, ref #9228 fix CloneClassificationOperation preliminary in TaxEditor
- 08:41 PM Revision 0b79f873 (taxeditor): ref #4866, ref #9228 fix CloneClassificationOperation preliminary in TaxEditor
- 08:36 PM Revision 77ad5e8c (taxeditor): ref #4866, ref #9228 fix CloneClassificationOperation preliminary in TaxEditor
- 08:06 PM Revision 9d1786e4 (cdmlib): ref #4866, ref #9228 try to fix further test in suite
- 08:01 PM Revision 8d24eb30 (cdmlib): cleanup
- 08:01 PM Revision 2b75e024 (cdmlib): ref #4866, ref #9228 try to fix NameServiceImplTest in suite
- 07:45 PM Revision 32aa5af0 (cdmlib): ref #4866, ref #9228 add references for test
- 07:28 PM Revision 8f658368 (cdmlib): ref #4866, ref #9228 fix test and use referenceDao instead of refService internally
- 07:19 PM Revision 67518a48 (cdmlib): ref #4866, ref #9228 implement subtree clone (cont., fix taxon cloning)
- 07:02 PM feature request #4866: Implement clone method for complete classifications
- this is a blocker for #9228
- 06:57 PM Revision 00f63413 (cdmlib): cleanup
- 06:33 PM Revision e04ce4b2 (cdmlib): ref #4866, ref #9228 implement subtree clone
- 04:43 PM task #9189: Move datasource view to taxeditor.local
- Katja Luther wrote:
> Andreas Müller wrote:
> > Katja Luther wrote:
> and the classLoader is EquinoxClassLoader
... - 02:42 PM task #9189: Move datasource view to taxeditor.local
- Andreas Müller wrote:
> Katja Luther wrote:
> > Andreas Müller wrote:
> > > The finish button does not seem to wor... - 02:31 PM task #9189: Move datasource view to taxeditor.local
- Katja Luther wrote:
> Andreas Müller wrote:
> > The finish button does not seem to work anymore (when using clone).... - 12:55 PM task #9189: Move datasource view to taxeditor.local
- Katja Luther wrote:
> Andreas Müller wrote:
> > The finish button does not seem to work anymore (when using clone).... - 12:00 PM task #9189: Move datasource view to taxeditor.local
- Andreas Müller wrote:
> The finish button does not seem to work anymore (when using clone).
This is caused by jav... - 11:50 AM task #9189: Move datasource view to taxeditor.local
- Andreas Müller wrote:
> Katja Luther wrote:
> > Andreas Müller wrote:
> > > The "New" button is missing.
> >
> ... - 11:49 AM task #9189: Move datasource view to taxeditor.local
- Andreas Müller wrote:
> Entering a name (or other information) now is very fast. It was slow before because I think ... - 11:37 AM task #9189: Move datasource view to taxeditor.local
- Katja Luther wrote:
> Andreas Müller wrote:
> > The "New" button is missing.
>
> Shouldn't the new button should... - 11:26 AM task #9189: Move datasource view to taxeditor.local
- Entering a name (or other information) now is very fast. It was slow before because I think there was always done som...
- 11:20 AM task #9189: Move datasource view to taxeditor.local
- Andreas Müller wrote:
> The "New" button is missing.
Shouldn't the new button should be removed in #9119? - 11:17 AM task #9189: Move datasource view to taxeditor.local
- The finish button does not seem to work anymore (when using clone).
- 11:14 AM task #9189 (Feedback): Move datasource view to taxeditor.local
- The "New" button is missing.
- 11:12 AM task #9189: Move datasource view to taxeditor.local
- Title translations are missing:
 - 04:39 PM bug #8851: display of name facts not appropriate in all cases
- Walter, can you have a look after the next release, if this is now all correct?
- 02:16 PM bug #8851 (Closed): display of name facts not appropriate in all cases
- 04:12 PM task #9206 (Closed): Solve cglib vs. cglib-nodep
- the dependency to `hibernate-cglib-repack` was introduced by ben on Wed Feb 25 2009.
I don't see any further need f... - 04:11 PM Revision 60942e5d (taxeditor): ref #9204, ref #9154 remove jtds and mssql from git in taxeditor.local
- 04:10 PM Revision 70ed1e1f (taxeditor): ref #9204, ref #9154 add cdmlib-remote-webapp.war to gitignore (not yet there because of renaming webapp->local
- 03:55 PM task #9219: Revert: requests with %2F in URL are rejected by apache
- to be done right after the release 5.18 is deployed to our servers
- 03:50 PM task #9253: revise OccurrenceServiceImpl.findFieldUnitDTO(..)
- updating description with latest TODOs
- 03:47 PM task #9253: revise OccurrenceServiceImpl.findFieldUnitDTO(..)
- .. and another one:
TODO: The methods `OccurrenceServiceImpl._findFieldUnitDTO` and `OccurrenceServiceImpl.findFie... - 03:07 PM task #9253: revise OccurrenceServiceImpl.findFieldUnitDTO(..)
- more TODO:
revise commented code and clean up - 03:46 PM Revision 99996219 (taxeditor): ref #9204 remove H2, postgresql and mysql fully from taxeditor.cdmlib
- 03:41 PM task #8458 (Closed): document FieldUnitDTOOccurrenceServiceImpl.findFieldUnitDTO()
- 03:41 PM task #8458 (Resolved): document FieldUnitDTOOccurrenceServiceImpl.findFieldUnitDTO()
- Applied in changeset commit:cdmlib|a20e6aec783ee2e911e75f315e0c9e0137c2e7e7.
- 03:41 PM Revision a20e6aec (cdmlib): fix #8458 documenting FieldUnitDTOOccurrenceServiceImpl.findFieldUnitDTO()
- 03:21 PM Revision 4e6b7379 (taxeditor): ref #9204 remove postgresql and mysql connector from taxeditor.cdmlib pom (cont.)
- 03:18 PM bug #8774: Reimplement term tree editors to implement the general save strategy
- Katja Luther wrote:
> Andreas Müller wrote:
> > Can we remove "Inapplicable IF" and "Only applicable if" for all te... - 01:49 PM bug #8774: Reimplement term tree editors to implement the general save strategy
- Andreas Müller wrote:
> Can we remove "Inapplicable IF" and "Only applicable if" for all term trees except for those... - 12:34 PM bug #8774 (Feedback): Reimplement term tree editors to implement the general save strategy
- Can we remove "Inapplicable IF" and "Only applicable if" for all term trees except for those having term type "Featur...
- 11:59 AM bug #8774: Reimplement term tree editors to implement the general save strategy
But this should be done immediately:
Rename menu entry "Term Tree Editor" to "Term Trees" as it is inconsistent ...- 11:56 AM bug #8774: Reimplement term tree editors to implement the general save strategy
- I moved the open menu items to #9338
- 08:44 AM bug #8774 (Resolved): Reimplement term tree editors to implement the general save strategy
- I think all issues are fixed. Only the wrong position for a short time (#9337) and handling of flat trees still open ...
- 03:16 PM Revision 47d8963b (taxeditor): ref #9204 remove postgresql and mysql connector from taxeditor.cdmlib pom
- 03:14 PM task #8635 (Closed): install collectd + facette for server monitoring
- this is now fairly complete. the ticket is linked from the [[ServerAdministration]] wiki page, so it can be closed
- 02:54 PM task #8419 (In Progress): Harmonization of the different specimen representations
- work still in progress, moving ticket to next milestone
- 02:53 PM task #8379: Review strange specimen implementations
- TODO: final check
- 02:28 PM Revision 8a79d625 (taxeditor): ref #9204 add jtds and mssql-jdbc-8.4.1.jre8 to gitignore
- 02:26 PM Revision 73192ab3 (taxeditor): ref #9204 remove some cdmlib-dbs from git and upgrade postgresql version
- 02:18 PM task #9265 (Closed): Adapt dataportal to new protologue handling
- now that #8851 is solved the functionality which has been removed while working on this ticket is restored, so we c...
- 02:13 PM Revision d9fa5913 (cdmlib): ref #8851 extednding init strategy for name descriptions by sources and annotations
- 02:11 PM Revision c11fa375 (cdm-dataportal): ref #8851 sources and annotations to name descriptions with test
- 01:45 PM Revision 233ae205 (cdmlib): ref #9204 upgrade postgresql driver to latest version
- 01:39 PM Revision 860adb95 (taxeditor): rename termtree editors to term trees in menu
- 01:38 PM Revision a3a44561 (cdmlib): move mchange-commons-java version to parent pom
- 01:30 PM Revision 5c44e322 (taxeditor): ref #9189: harmonize l10n files
- 01:28 PM Revision 59174ab0 (cdmlib): ref #4866, ref #9228 implement subtree clone in branch
- 12:18 PM bug #8522: Make type status mandatory in Name type designation editor
- Note: A name type might be a status only that is not in the dropdown list, such as:
conserved type
rejected type
t... - 11:55 AM feature request #9338: Restructure term menus
- I put milestone to 5.19 as it belongs to #8774 content wise.
- 11:55 AM feature request #9338 (Closed): Restructure term menus
- We now have the vocabulary menu and the term tree menu. Both look very different but should look similar.
To me it... - 11:30 AM feature request #9326: Show all authors in bibliographic references
- this is rather a question of how the cache strategy. Therefore I am changing category and assignee accordingly
- 10:57 AM bug #9199: Adapt TaxEditor to switch to originalSource for remaining single sourced objects
- ~~Another minor issue: could we move "Original Information" above ID Namespace and ID in Source. It is probably more ...
- 10:56 AM bug #9199: Adapt TaxEditor to switch to originalSource for remaining single sourced objects
- NPE when editing a lectotype source
~~~
last remote method : http://test.e-taxonomy.eu:80/cdmserver/rem_conf_am/r... - 10:52 AM bug #9199 (Feedback): Adapt TaxEditor to switch to originalSource for remaining single sourced objects
- The space between URI and type (in external links could be a bit smaller and therefore a bit more space between type ...
- 10:51 AM bug #9199: Adapt TaxEditor to switch to originalSource for remaining single sourced objects
- Sometimes the nomenclatural source still shows "No external link" yet instead of no protologue yet.
: ref #8851 adapting side-effected NameRelationshipsTest
- 05:33 PM Revision f06c22c7 (cdm-dataportal): ref #8851 adding missing space
- 05:23 PM Revision 79bd5456 (cdm-dataportal): ref #8851 adapting test for name desciptions
- 05:14 PM Revision e024a603 (cdm-dataportal): ref #8851, ref #9265 improved re-implementation of name desciptions (annotations and sources still pending)
- 04:54 PM bug #8851: display of name facts not appropriate in all cases
- to query for relevant data:
~~~sql
SELECT db.DTYPE, db.id, feature.titleCache, deb.DTYPE, osb.id, osb.citation_id... - 03:51 PM feature request #9337 (Closed): Open issues for reimplementation of termtree editors
- copied from #8774
1. ~~Show supplemental data (IMPORTANT)~~(actually only for nodes)
2. For a very short time ... - 03:42 PM bug #8774: Reimplement term tree editors to implement the general save strategy
- Andreas Müller wrote:
> When adding/removing terms the tree should stay expanded. Currently it collapses and you hav... - 02:42 PM bug #8774: Reimplement term tree editors to implement the general save strategy
- Andreas Müller wrote:
> There is still camle case in the label
>
> 
this is fixed - 10:12 AM bug #8774: Reimplement term tree editors to implement the general save strategy
- Andreas Müller wrote:
> Andreas Müller wrote:
> > Andreas Müller wrote:
> > > The duplicate check should be done w... - 03:40 PM Revision 0e21282a (cdmlib): ref #8774: save term tree titleCache
- 03:25 PM task #9265 (In Progress): Adapt dataportal to new protologue handling
- now I found the missing bit.
In commit:cdm-dataportal|f9b5740e33ff94ab9e1703774379f5d67d103649 the apparently imc... - 01:08 PM task #9265 (Closed): Adapt dataportal to new protologue handling
- cant see that there is still something missing and thus closing this ticket
- 02:55 PM bug #9103 (Closed): missing exception handling in TaxoNodeDto
- the last commit fixes the potential NPE that was in the code after the previous commit. The code looks ok now and the...
- 01:06 PM bug #9103: missing exception handling in TaxoNodeDto
- Andreas Kohlbecker wrote:
> Katja Luther wrote:
> > the null check for the classification is missing, the rest seem... - 12:13 PM bug #9103: missing exception handling in TaxoNodeDto
- Katja Luther wrote:
> the null check for the classification is missing, the rest seems to be correct.
Good point,... - 11:56 AM bug #9103 (Feedback): missing exception handling in TaxoNodeDto
- the null check for the classification is missing, the rest seems to be correct.
- 02:47 PM bug #8547: Default type of a newly created inReference should depend on the type of the reference
- Katja Luther wrote:
> The type of the in-reference depends on ReferenceType.inReferenceContraints, we should add the... - 02:33 PM bug #8547: Default type of a newly created inReference should depend on the type of the reference
- Andreas Müller wrote:
> I got the following NPE when playing around with the dialog:
>
> ~~~
>
This should b... - 02:16 PM bug #8547: Default type of a newly created inReference should depend on the type of the reference
- The type of the in-reference depends on ReferenceType.inReferenceContraints, we should add the constraints mentioned ...
- 02:30 PM bug #6623 (Closed): formatter for bibliografic citations with citationDetail
- I am pretty sure that this was a requirement for the TypeDesignationManager which was composing References + referen...
- 02:29 PM Revision b5fdbda7 (taxeditor): avoid NPE
- 02:04 PM feature request #9229 (Closed): TaxonNameEditor: use NomenclaturalStatusDTO to avoid data loading probems within setters in TaxonName
- the issue has been fixed in #9318, so we can close this ticket again.
- 01:45 PM feature request #9336 (New): Serverside preference for last used references
- ERS:
eine weitere Auffälligkeit:
bei der Auswahl von Referenzen für Faktendaten (in meinem Fall für Verbreitung... - 01:39 PM Revision da9e29c4 (cdmlib): ref #9103: add handling of classifications in TaxonnodeDto - continue
- 01:24 PM task #9253: revise OccurrenceServiceImpl.findFieldUnitDTO(..)
- there are two open FIXMEs in the method:
~~~
// FIXME defining propertyPaths inside of transactional service meth... - 01:17 PM Revision 6706afc3 (cdmlib): ref #9103: add handling of classifications in TaxonnodeDto
- 01:12 PM bug #9220 (Closed): adapt dataportal to /registrationDTO now using identifier as query parameter and secure against CVE-2007-0450 vulnerability
- 01:11 PM bug #9218 (Closed): Change /registrationDTO/identifier/... signatures to use query parameters instead
- can be closed now that remaining tasks are copied to #9275
- 01:09 PM bug #9318 (Closed): TaxonNameEditor: nomenclatural reference no longer selectable
- 01:06 PM task #9222 (Closed): Adapt dataportal to switch to originalSource for remaining single sourced classes
- 12:49 PM Revision 87caa5aa (taxeditor): ref #8774: adapt to termNodeDto changes
- 12:37 PM feature request #4754: Implement webservice to get the date of the last change or to check if there are any changes since a certain date
- BTW: this is the relevant method in the AbstractOaiPmhController: `eu.etaxonomy.cdm.remote.controller.oaipmh.Abstract...
- 12:09 PM Revision 94959be3 (cdmlib): ref #9103 adding missing null check
- 12:06 PM feature request #9262 (Closed): Several open issues for cdmlight export related to Cactaceae and other Caryophallales
- Andreas Müller wrote:
> so can we close the ticket?
yes. - 12:06 PM bug #9256 (Closed): CdmLightExport: NameTypeDesignation string misses parenthesis for authors
- 12:02 PM task #9189: Move datasource view to taxeditor.local
- yes, please check whether everything still works.
- 12:00 PM Revision e1397e51 (cdmlib): cleanup
- 11:59 AM bug #8174: First test fails if term data is in loaded DataSet
- Andreas Kohlbecker wrote:
> I think we should go for option 3) that is to remove TestingTermInitializer and to rely ... - 11:48 AM Revision 79221c91 (cdm-dataportal): ref #9279 adapting test to modified output of the TypeDesignationSetManager
- 11:33 AM Revision 758cf8ed (cdmlib): Adapt javadoc for TypeDesignationBase
- 11:00 AM Revision 7c5f89b4 (cdmlib): ref #8774: avoid NPE in termNodeDto
- 10:58 AM task #9228 (In Progress): Adaptations to allow editing Centaurea in Flora of Greece
- 09:41 AM feature request #9192: Layout issues for source in taxonnode details
- I think the only thing still open, is the gap on top of the expandable element. I move this to 5.19 because it is not...
- 09:37 AM Revision 69bed327 (taxeditor): fix #9199: layout issues in nomenclatural source details and external links
- 09:37 AM bug #9199 (Resolved): Adapt TaxEditor to switch to originalSource for remaining single sourced objects
- Applied in changeset commit:taxeditor|69bed327b7a5028e5f904ffe9ac8cca1d01a20e9.
- 09:26 AM bug #9257: revise filtering in OccurrenceServiceImpl.assembleFieldUnitDTO(FieldUnit fieldUnit) by SpecimenOrObservationType.PreservedSpecimen
- Andreas Kohlbecker wrote:
> Hi Katja & AM, the current implementation partially filters for DerivedUnits of the type... - 09:18 AM feature request #9299 (Closed): Add LSID to author and reference details
- the issues mentioned above are solved, so I close this ticket
11/27/2020
- 07:22 PM task #9280 (Closed): Refactor: IKeyTerm.getMessage() --> IKeyTerm.getLabel()
- This has been fixed. As all code compiles now I think review is not necessary. Please review if you think it is needed.
- 07:20 PM Revision e522c53f (taxeditor): remove unwanted commit
- 07:20 PM Revision cc7051ed (taxeditor): ref #9280 adapt TaxEditor to new Term.getLabel() (cont. 2)
- 07:16 PM Revision 2a7ad236 (taxeditor): ref #9280 adapt TaxEditor to new Term.getLabel() (cont.)
- 07:08 PM Revision 137d0ad0 (taxeditor): ref #9280 adapt TaxEditor to new Term.getLabel()
- 07:08 PM Revision 4e6a6782 (taxeditor): cleanup
- 06:33 PM bug #9322 (Resolved): Remove invalid designation taxon relationship
- This is generally fixed. Only in integration_reference there is still 1 record left (mail sent to AK).
After relea... - 06:28 PM Revision 340adc01 (cdmlib-apps): ref #9280 adapt appimport to new Term.getLabel()
- 06:27 PM Revision 82fc7e6e (cdmlib-apps): ref #9322 adapt BerlinModelOccurrenceSourceImport to removed Invalid Designation
- 06:24 PM Revision 18620ac6 (cdmlib): ref #9280 rename IKeyTerm.getMessage() => .getLabel()
- 05:47 PM Revision 0d1aca12 (cdmlib): cleanup
- 05:33 PM bug #8547: Default type of a newly created inReference should depend on the type of the reference
- Andreas Müller wrote:
> For "Section" the type is "InProceedings" now which is generally false. We should use "Gener... - 05:26 PM bug #8547: Default type of a newly created inReference should depend on the type of the reference
- I got the following NPE when playing around with the dialog:
~~~
last remote method : http://test.e-taxonomy.eu... - 05:25 PM bug #8547 (Feedback): Default type of a newly created inReference should depend on the type of the reference
- For "Section" the type is "InProceedings" now which is generally false. We should use "General" as before or even bet...
- 04:24 PM feature request #5795 (Closed): [DISCUSS] Do we need comb. ined. as a nomenclatural status?
- It has been added now. So I close the ticket.
- 04:23 PM feature request #6589 (Closed): Handle protologue as original source with URI link
- I think we can close this ticket.
- 04:21 PM bug #8326 (Closed): update labels for is blocking name and is isonym
- 04:18 PM bug #9335 (Closed): termTree webservice response misses titleCache
- 03:40 PM bug #9335 (In Progress): termTree webservice response misses titleCache
- 02:31 PM bug #9335 (Feedback): termTree webservice response misses titleCache
- There were no changes/commits for long time on the above tickets. So I don't think it is related.
Maybe related to... - 02:20 PM bug #9335 (Closed): termTree webservice response misses titleCache
1. termTree webservice response misses the titleCache field
1. ~~there is evidence for that the order of the terms...- 04:14 PM bug #9124 (Closed): Altitude feature should have [m] as measurement unit by default
- 04:14 PM bug #9124: Altitude feature should have [m] as measurement unit by default
- I expect this to work so I close the ticket.
- 03:53 PM bug #9124: Altitude feature should have [m] as measurement unit by default
- I tested on test and integration. The result looks fine. But we should also run on production once after the release ...
- 04:13 PM task #9062 (Closed): Remove StatisticalMeasurementValue.value_old
- Is fixed.
- 04:11 PM task #9082 (Closed): Update script for old empty Partials handling
- 04:07 PM Revision 2347bf25 (cdmlib): ref #9335 creating fallback representation for Terms in TermBaseBeanProcessor - bug fix
- 04:06 PM task #9094 (Closed): Update script to update TaxonNode.source from IdentifiableSource to DescriptionElementSource
- This is fixed
- 04:00 PM task #9120: Update script for flowering period supports temporal data
- ~~~sql
SELECT *
FROM DefinedTermBase dtb
WHERE dtb.supportedDataTypes LIKE '%#TED#%'
~~~ - 03:59 PM task #9120 (Closed): Update script for flowering period supports temporal data
- This is fixed on test and integration databases.
- 03:55 PM feature request #9121 (Closed): Add abbreviations to Feature
- I think we can close this ticket. Looks like it works. We could test on production, but as it not really critical, th...
- 03:50 PM bug #9267: No sec reference for move change Synonym to accepted Taxon
- By the way, as the above action is a taxon split, in future there will be the need of more user interaction during th...
- 03:42 PM bug #9267 (Feedback): No sec reference for move change Synonym to accepted Taxon
- The above requirement works as expected but I do not fully agree to the requirement. I think we discussed this some t...
- 03:49 PM Revision d8001ede (cdm-dataportal): ref #9335 using term representation instead of titleCache
- 03:48 PM Revision f86bb6df (cdm-dataportal): removing before protologue icon to conform to test assertions§
- 03:45 PM Revision f9a4a64f (cdmlib): ref #9335 creating fallback representation for Terms in TermBaseBeanProcessor - 2
- 03:43 PM Revision 82885917 (cdmlib): ref #9335 creating fallback representation for Terms in TermBaseBeanProcessor
- 02:01 PM feature request #9282: Add nomenclatural standing
- This generally works and can be closed. A final update script still needs to run to change handling of nom. confus. a...
- 01:57 PM feature request #4644 (New): json lib incorrectly serializes values containig the characters [, ], {, }
- the above mentioned commit had to be reverted, so this issue is open again
- 01:29 PM Revision a75434dd (cdm-vaadin): aqdapting to RegistrationDTO typifiedName as non-property
- 12:52 PM Revision f2198885 (cdmlib): ref #9265 removing NomenclaturalSourceBeanProcessor since it causes many hard to controll LazyInitializationExcptions in web services
- 12:51 PM task #6591 (Closed): Use name used in source for original spelling
- I think this works and can be closed.
- 12:49 PM Revision 0188f3d8 (cdmlib): typo
- 12:45 PM Revision 9c96ba36 (cdm-dataportal): ref #9265 reverting to old nomRef retrival strategy and fixing bugs
- 12:45 PM bug #8776 (New): Open issues for TermCollection.allowDuplicates handling in TaxEditor
- Now the duplicates are checked on editor side and the message dialog shows which terms can not be added because they ...
- 11:38 AM bug #8776 (In Progress): Open issues for TermCollection.allowDuplicates handling in TaxEditor
- Looks like this is partly fixed already (at least first part of first issue). As it is related to #8774 we should try...
- 12:44 PM Revision a3e8d11d (taxeditor): ref #8774: show which terms are duplicates in dialog
- 12:36 PM task #5856 (Rejected): [DISCUSS] Consider implemeting additional name relationships
- So I mixed it up. This is on implementation in **dataportal**.
However, I think if name relationships are all show... - 12:21 PM task #3967 (Duplicate): Rethink original spelling strategy
- This is a duplicate for #6591
- 12:06 PM feature request #9194 (Closed): Make RelationshipBase and NomenclaturalStatus reference OriginalSource
- This is fixed. I checked the update script result against some test databases. Looks ok (for hybrid relations I did n...
- 11:58 AM Revision 8bc96896 (cdm-dataportal): Revert "ref #9265 getting citationDetail from NomenclaturalSource"
- This reverts commit d5de0b1f6ed6901d71ccdb8a5a9b44805f907bf0.
- 11:49 AM Revision c9d0cb80 (taxeditor): ref #8774: update of termtree editor after creating/removing tree
- 11:35 AM bug #8774: Reimplement term tree editors to implement the general save strategy
- Andreas Müller wrote:
> Andreas Müller wrote:
> > The duplicate check should be done when adding the term not only ... - 11:22 AM bug #8774: Reimplement term tree editors to implement the general save strategy
- Andreas Müller wrote:
> Andreas Müller wrote:
> > It is now possible to open 2 term tree Editors of the same type. ... - 11:21 AM bug #8774: Reimplement term tree editors to implement the general save strategy
- Andreas Müller wrote:
> Andreas Müller wrote:
> > Can we still Change the menu that way that we have Vocabularies i... - 11:21 AM bug #8774: Reimplement term tree editors to implement the general save strategy
- Andreas Müller wrote:
> Similar to the duplicates issue a term tree can be "flat". In this case adding a child to a ... - 09:23 AM bug #8774: Reimplement term tree editors to implement the general save strategy
- Similar to the duplicates issue a term tree can be "flat". In this case adding a child to a term node should not be a...
- 09:20 AM bug #8774: Reimplement term tree editors to implement the general save strategy
- Andreas Müller wrote:
> The duplicate check should be done when adding the term not only when saving it.
>
> this... - 09:12 AM bug #8774: Reimplement term tree editors to implement the general save strategy
- There is still camle case in the label
 - 08:52 AM bug #8774: Reimplement term tree editors to implement the general save strategy
- Andreas Müller wrote:
> Can we still Change the menu that way that we have Vocabularies instead of "Feature", "Named... - 08:51 AM bug #8774: Reimplement term tree editors to implement the general save strategy
- Andreas Müller wrote:
> Trying to open the feature tree editor opened it in the buttom panel and no tree appeared an... - 08:47 AM bug #8774: Reimplement term tree editors to implement the general save strategy
- Andreas Müller wrote:
> It is now possible to open 2 term tree Editors of the same type. This is not wanted as a ter... - 08:38 AM bug #8774 (Feedback): Reimplement term tree editors to implement the general save strategy
- When moving a term up in feature tree via d&d
~~~
last remote method : http://test.e-taxonomy.eu:80/cdmserver/rem... - 11:20 AM Revision 695b1de9 (taxeditor): remove camel case
- 11:12 AM feature request #9307 (Closed): Preferences for display of termtrees and entries
- 09:11 AM feature request #9307: Preferences for display of termtrees and entries
- I guess this is for final review again.
- 08:45 AM feature request #9307 (Resolved): Preferences for display of termtrees and entries
- Applied in changeset commit:taxeditor|9d517193984ee588d4ee88484ddc791710ce613c.
- 08:41 AM feature request #9307: Preferences for display of termtrees and entries
- The functionality itself works. So, when the label is fixed, the ticket can be closed.
- 08:32 AM feature request #9307 (Feedback): Preferences for display of termtrees and entries
- The label still does not work
 - 11:07 AM Revision 14417ce8 (taxeditor): ref #8774: move all term editor menu items to vocabularies
- 10:55 AM Revision 0307d72a (taxeditor): ref #8774: open termTree editors only once
- 10:52 AM Revision 6b891987 (cdmlib): code cleaning and improving documentation
- 10:51 AM Revision 2315a55d (cdmlib): RegistrationDTO: typifiedName as non-property
- 10:21 AM Revision 06fba5d3 (cdm-dataportal): typo
- 09:09 AM feature request #9287: Show term details in details view of term tree editor
- Maybe we do not need to load the data with the initial DTO but asynchronously when ever it is needed. Just in case lo...
- 08:55 AM feature request #9287: Show term details in details view of term tree editor
- As this is related to #8774 I move it to current milestone as we should implement it soon (might also be an interesti...
- 08:45 AM Revision 9d517193 (taxeditor): fix #9307: add missing translation#
- 08:20 AM bug #9199: Adapt TaxEditor to switch to originalSource for remaining single sourced objects
- Another layout issue somehow related: In external link, can we move the URI to the top and the type below URI? URI is...
- 08:17 AM bug #9199 (Feedback): Adapt TaxEditor to switch to originalSource for remaining single sourced objects
- But it should be adapted for all single sources like for TaxonNode.source. So indentation is needed everywhere, excep...
- 08:14 AM bug #9199: Adapt TaxEditor to switch to originalSource for remaining single sourced objects
- Yes, this looks much better. Only for nom. sources "more" is still bold. Can you adapt it there, too?
11/26/2020
- 04:02 PM Revision 9c6a5661 (taxeditor): smaller layout issue in specimenSelectionDialog for character matrix
- 03:46 PM Revision 52d904ba (taxeditor): remove protologue detail files
- 03:45 PM Revision e5df12cf (taxeditor): remove merge comment
- 02:58 PM Revision 96a59002 (taxeditor): merge issues
- 02:54 PM Revision b1a6925c (taxeditor): ref #9299: layout issues
- 02:54 PM Revision aab656a8 (taxeditor): layout issues for single source elements
- 02:27 PM bug #9334 (New): Show error message when feature tree can not be shown because of dirty data
- see #8774#note-32
- 02:22 PM bug #8774 (Resolved): Reimplement term tree editors to implement the general save strategy
- For the missing feedback I create a new ticket, can we close this ticket?
- 02:21 PM bug #9199 (Resolved): Adapt TaxEditor to switch to originalSource for remaining single sourced objects
- I think this is fixed now. Please review.
- 01:05 PM Revision aae9aefe (cdm-dataportal): spanish translation Type->Tipo
- 12:54 PM task #9266 (Closed): Remove protologue section from TaxEditor
- 09:32 AM task #9266 (Resolved): Remove protologue section from TaxEditor
- 09:31 AM task #9266: Remove protologue section from TaxEditor
- Andreas Müller wrote:
> Katja Luther wrote:
> > >
> > > Maybe we could even use the above preference to show or n... - 11:17 AM Revision beb7ecbe (cdm-dataportal): ref #9265 adapting test to improved nomRef citation string generation
- 11:12 AM Revision f00c6f98 (cdm-dataportal): ref #9279 adapting class attribute handling to TypeDesignationDTO
- 10:21 AM feature request #9225 (Closed): Make TaxonName.nomenclaturalSource a new DescriptionElementSource subclass
- yes I also think that this ticket can be closed.
There might be still some cases in which LIEs might pop up but thes... - 09:31 AM feature request #9333 (New): Preference for display of protologue section in nomenclatural source section
- from #9266:
The protologue section should also be removed from local and DB preferences I guess as it probably has...
11/25/2020
- 10:48 PM feature request #9262: Several open issues for cdmlight export related to Cactaceae and other Caryophallales
- so can we close the ticket?
- 10:46 PM feature request #9192 (Feedback): Layout issues for source in taxonnode details
- Are these still open issues. To me it looks like most of it is solved somehow. But maybe I do not understand some of ...
- 10:40 PM bug #9199: Adapt TaxEditor to switch to originalSource for remaining single sourced objects
- ... for TaxonNodes.source we should keep indentation of "more" as it is followed by "Related persons"
- 10:36 PM bug #9199 (Feedback): Adapt TaxEditor to switch to originalSource for remaining single sourced objects
- Can we adapt single source layout according to nomenclatural source layout?
So we
* move External Link up and... - 09:54 PM feature request #9332 (Closed): Rename TypeDesignationBase.source to .designationSource
- as simple "source" creates confusion as there are also the general sources attached to TypeDesignationBase.
- 09:37 PM feature request #6581 (Closed): Make all microreferenced references OriginalSources
- I think we can close this ticket now. Please reopen if you think there is still something open that is not yet handle...
- 09:32 PM feature request #9331 (Closed): Distinguish DescriptionElementSource and NamedSource
- ... NamedSource is now used in more cases and DescriptionElementSource should have a backlink to DescriptionElement
... - 09:24 PM task #9330 (Closed): Remove "NomenclaturalSource" from OriginalSourceType
- As nomenclatural sources now have there own subclass PrimaryTaxonomicSource is enough for nomenclatural sources.
H... - 09:14 PM Revision dba500e8 (cdmlib): ref #6623 include microReference in DefaultReferenceCacheStrategy.getCitation(...) (cont.)
- 08:59 PM bug #6623 (Resolved): formatter for bibliografic citations with citationDetail
- This should be something like DefaultReferenceCacheStrategy.getNomenclaturalCitation(Reference, String) but for bibli...
- 08:58 PM Revision da04d3c7 (cdmlib): ref #6623 include microReference in DefaultReferenceCacheStrategy.getCitation(...)
- 08:55 PM Revision 3107f6d9 (cdmlib): cleanup
- 08:16 PM feature request #9194 (Resolved): Make RelationshipBase and NomenclaturalStatus reference OriginalSource
- I guess this is fixed as we use it already in TaxEditor
- 08:10 PM feature request #9329 (Closed): Implement sec reference as original source in dataportal
- This is a remaining issue from #9222 as model change is required first.
Also have in mind to adapt jsonConfigura... - 08:08 PM feature request #9328 (Closed): Adapt Editor to switch to originalSource for taxon secundum
- This is the remaining issue from #9199.
Requires model implementation #9327 - 08:07 PM feature request #9327 (Closed): Make taxon secundum reference an original source
- copied from #6581
- 08:04 PM feature request #9326: Show all authors in bibliographic references
- The third screen shot shows a (new?) truncation of a long title. Looks not bad but is not correct. In this case Fragi...
- 08:02 PM feature request #9326 (Closed): Show all authors in bibliographic references
- In PhycoBank it is necessary to show a complete reference including all bibliographical authors. This is also relevan...
- 08:01 PM Revision 22ac5dcd (cdmlib): change name for TaggedEntityReference
- 07:29 PM feature request #9325 (Duplicate): Enable section in specimen type designation
- The idea is to select or create a section for the typification (of the name we are coming from). Might be necessary f...
- 07:15 PM feature request #9324 (Closed): Enable designation reference editing in name type designation
Main issues:
6: enable to select an available section (new names) or create a new section (for e.g. lecto- or n...- 06:35 PM bug #9322: Remove invalid designation taxon relationship
- Find possible cases:
~~~sql
SELECT tr.id, tb1.titleCache fromx , tb2.titleCache tox, tr.*
FROM TaxonRelationship... - 02:38 PM bug #9322 (Closed): Remove invalid designation taxon relationship
- Invalid designations are simply names which are not valid and therefore are called "designations" only not "names".
... - 06:21 PM Revision 7f5fe60c (taxeditor): ref #9322 adapt TaxEditor to removed invalid designation relationship (cont. 3)
- 06:15 PM Revision a647b46a (taxeditor): ref #9322 adapt TaxEditor to removed invalid designation relationship (cont. 2)
- 06:10 PM Revision 86b95854 (cdm-dataportal): ref #9279 using taggedText in TypeDesignationDTO in portal
- 06:08 PM Revision d8417735 (cdmlib): ref #9279 TypeDesignationDTO basing on new class RepresentableEntityReference
- 06:07 PM Revision 562f293f (cdmlib): ref #9265 making use of nomenclaturalSource->nomenclaturalCitation - extending initStrategy
- 05:53 PM Revision adbd3997 (taxeditor): ref #9322 adapt TaxEditor to removed invalid designation relationship (cont.)
- 05:49 PM Revision d9853ce6 (cdm-vaadin): cleanup
- 05:49 PM Revision 8cf3ca0a (cdm-vaadin): ref #9322 adapt vaadin to removed invalid designation relationship
- 05:46 PM Revision e2771053 (cdm-dataportal): ref #9279 adding TypeDesignationDTO to cdm_ws_base_uri()
- 05:46 PM Revision 11358be4 (taxeditor): ref #9322 adapt TaxEditor to removed invalid designation relationship
- 05:25 PM Revision e4c8c2c8 (cdmlib): cleanup
- 05:25 PM Revision 1ffd1c27 (cdmlib): ref #9322 remove invalid designation relationship from cdmlib
- 05:09 PM Revision 4fa58f06 (cdm-dataportal): ref #9265 making use of nomenclaturalSource->nomenclaturalCitation
- 05:08 PM feature request #4644 (Rejected): json lib incorrectly serializes values containig the characters [, ], {, }
- this is no longer relevant since we no longer need to get the microreference separately commit:aa06c1f1a2
The hack... - 05:06 PM Revision aa06c1f1 (cdmlib): ref #9265 introducing NomenclaturalSourceBeanProcessor to add nomenclaturalCitation to web service responses
- 03:16 PM task #9222 (Resolved): Adapt dataportal to switch to originalSource for remaining single sourced classes
- this should be mainly fixed, only needs final review
- 03:06 PM task #8275 (Worksforme): [DISCUSS] Relationship between invalid designations and invalid names / nom. inval.
- AM:
Es gibt noch das Ticket #8275 , welches ich erstellt habe, als ich noch nicht so genau wußte, was es mit der A... - 03:04 PM task #8275: [DISCUSS] Relationship between invalid designations and invalid names / nom. inval.
- Andreas Müller wrote:
> All invalid names (term ids may need to be adapted)
I think this is handled sufficiently ... - 03:03 PM task #9265 (Resolved): Adapt dataportal to new protologue handling
- 03:03 PM task #9265: Adapt dataportal to new protologue handling
- new ticket for discussion on display of ExternalLink.description: #9323
- 12:25 PM task #9265: Adapt dataportal to new protologue handling
- Andreas Kohlbecker wrote:
> this is basically implemented, tests are pending.
>
> One question in advance: Extern... - 03:01 PM task #9323 (New): discuss display of ExternalLink.description
- ExternalLink has the property description, how should this be handled in case of the protologues? I suggest using foo...
- 02:57 PM Revision 61e84a73 (cdmlib): ref #9265 implementing protologueLinks web service
- 02:53 PM Revision a8393f17 (cdm-dataportal): ref #9265 implementing test for nom-ref and protologues, also preparing for ref #9319 - 2
- 02:46 PM Revision c11d7e10 (cdm-dataportal): ref #9265 implementing test for nom-ref and protologues, also preparing for ref #9319
- 02:42 PM task #8055 (Rejected): Correct formatting for invalid designations
- As Invalid Designation relationships are not supported anymore (as they are incorrect, #9322) this ticket can be clos...
- 02:18 PM Revision 180653b7 (taxeditor): remove create/change to invalid designation handler
- 02:14 PM Revision 99a52e55 (cdmlib): ref #9282 fix NPE in nomenclaturalStanding computation
- 01:51 PM Revision d5de0b1f (cdm-dataportal): ref #9265 getting citationDetail from NomenclaturalSource
- 01:22 PM feature request #9321 (New): Make availability of pro-parte synonyms configurable
- Mostly pro parte synonyms should not be created in TaxEditor, therefore it should be configurable whether the menu it...
- 12:25 PM Revision ceeaac02 (taxeditor): fix microreference saving
- 12:20 PM bug #9241: replace/adapt descriptionPart in render templated
- I guess this should be done shortly after the current release so I put it to the current milestone for now so we do n...
- 12:18 PM feature request #9225: Make TaxonName.nomenclaturalSource a new DescriptionElementSource subclass
- Andreas Müller wrote:
> I think the vaadin test are now fixed (?). So can we close this ticket?
?? - 12:17 PM task #9266: Remove protologue section from TaxEditor
- Katja Luther wrote:
> >
> > Maybe we could even use the above preference to show or not show the external link sec... - 12:12 PM feature request #9320 (In Progress): Move additional publication information to nomenclatural source
- copied from #6589 (see discussion starting at #6589#note-24)
Currently it is stored as name description but the da... - 12:04 PM feature request #6589: Handle protologue as original source with URI link
- Andreas Kohlbecker wrote:
> Interesting, that the UUID is different from that in the data portal code ('cb2eab09-6d9... - 10:58 AM feature request #6589: Handle protologue as original source with URI link
- also in
* cdm_production_cichorieae
* cdm_production_euromed
* cdm_production_euromed_caucasus
* cdm_productio... - 10:44 AM feature request #6589: Handle protologue as original source with URI link
- Interesting, that the UUID is different from that in the data portal code ('cb2eab09-6d9d-4e43-8ad2-873f23400930').
... - 10:37 AM Revision 8d86ce45 (taxeditor): smaller layout issues and avoid NPE
- 09:42 AM Revision 1ac5fff7 (cdmlib): avoid NPE and CCE
11/24/2020
- 11:04 PM Revision 1918f07a (cdmlib): ref #9279 fix TypedEntity for source
- 10:36 PM feature request #6589: Handle protologue as original source with URI link
- Additional Publications do definetely exist, e.g. in E+M or caryo_spp
~~~sql
SELECT db.DTYPE, db.id, feature.titl... - 09:54 PM feature request #6589: Handle protologue as original source with URI link
- I found a special case in the data portal code for the feature:
~~~
UUID_ADDITIONAL_PUBLICATION = 'cb2eab09-6d9d-... - 10:34 PM task #9265 (Feedback): Adapt dataportal to new protologue handling
- this is basically implemented, tests are pending.
One question in advance: ExternalLink has the property `descript... - 10:26 PM Revision df2b235a (cdm-dataportal): ref #9265 switching to NomenclaturalSource.links for protologues - comment
- 10:16 PM Revision f9b5740e (cdm-dataportal): ref #9265 switching to NomenclaturalSource.links for protologues
- 10:12 PM bug #9318: TaxonNameEditor: nomenclatural reference no longer selectable
- Reference selectable for basionym, replaced synonym, and validation. The ticket can be closed.
- 05:18 PM bug #9318 (Resolved): TaxonNameEditor: nomenclatural reference no longer selectable
- this should be fixed now, can you please review?
- 05:17 PM bug #9318 (In Progress): TaxonNameEditor: nomenclatural reference no longer selectable
- 05:13 PM bug #9318 (Duplicate): TaxonNameEditor: nomenclatural reference no longer selectable
- 05:10 PM bug #9318: TaxonNameEditor: nomenclatural reference no longer selectable
- this is actually a bug introduced with #9229 - implementation was incomplete.
- 04:49 PM bug #9318 (Closed): TaxonNameEditor: nomenclatural reference no longer selectable
- after the changes that turn the nomenclatural reference into a `DescriptionElementSource` (#9225, #6581) the nomencla...
- 09:58 PM Revision 27a6e8d7 (cdmlib): ref #9279 add TypedEntities to TypeDesignationDTO
- 09:57 PM Revision 2fb2834c (cdmlib): cleanup
- 09:45 PM Revision a0ab64df (cdm-dataportal): ref #9279 adapt orderdTypeDesig type in cdmdataportal
- 08:55 PM Revision d38359c9 (cdm-vaadin): ref #9279 fix type and improve generics for TypedEntityReference (vaadin, cont.)
- 08:51 PM Revision 47f6500b (cdmlib): ref #9279 use RegistrationDTO instead of TypedEntityReference for TypeDesignations
- 08:36 PM Revision 7f1705a9 (cdmlib): cleanup
- 07:30 PM Revision 6d344620 (cdmlib): ref #9279 fix make WorkingSet a Map again and cleanup
- 07:04 PM task #9319 (New): adapt name render templates to new nomenclatural source which also contain protologues as external links
- 1. The render templates still refer to the old model in which protologues have been handled via name descriptions.
2... - 06:56 PM Revision 32955f5b (cdmlib): ref #9279 make WorkingSet a Map again and fix typo in RegistrationDTO attribute and fix jsonConfigurations
- 06:23 PM Revision cbe1466f (cdm-vaadin): ref #9279 improve generics for TypedEntityReference (vaadin)
- 06:23 PM Revision de5e3f7c (cdm-vaadin): ref #9279 extract TypeDesignationWorkingSet as top level class and some cleanup (vaadin)
- 06:16 PM Revision c386f139 (cdmlib): ref #9279 improve generics for TypedEntityReference
- 05:31 PM Revision 7471539c (cdmlib): ref #9279 separate formatting from TypeDesignationSetManager and extract TypeDesignationWorkingSet as top level class and some cleanup
- 05:17 PM Revision c1c4b55f (cdm-vaadin): ref #9318 fixing problem with NomenclaturalSource selection in TaxonNameEditor
- 05:12 PM feature request #9229 (In Progress): TaxonNameEditor: use NomenclaturalStatusDTO to avoid data loading probems within setters in TaxonName
- reopening since this implementation is incomplete, see #9318
- 03:14 PM Revision a5a8be33 (taxeditor): ref #8769: move source ref to configuration wizard
- 03:00 PM Revision 842cd0b7 (cdmlib): cleanup
- 02:58 PM Revision 5c5865f6 (taxeditor): ref #8769: structure the configuration elements - add source
- 02:39 PM feature request #8769: Biocase import configuration should be shown when clicking on import button
- the wizard is structured in the way described above.
- 12:55 PM feature request #8769 (In Progress): Biocase import configuration should be shown when clicking on import button
- 12:55 PM feature request #8769: Biocase import configuration should be shown when clicking on import button
- now the configuration dialog is opened with every click on import and the classifiction is added to the config wizard.
- 02:36 PM Revision a63e71bd (taxeditor): ref #8769: structure the configuration elements
- 02:35 PM Revision 5ca40190 (cdmlib): ref #9279 remove redundant typifiedNameRef (TypedEntityReference) and cleanup
- 12:57 PM Revision 19793be6 (cdmlib): cleanup
- 12:56 PM Revision f1145594 (cdmlib): ref #9282 adapt dataset.dtd to NomenclaturalStanding
- 12:23 PM Revision 7b5149a3 (cdmlib): preliminary fix compile error in SchemaUpdater_5185_5186
- 12:18 PM Revision 9d43b70b (cdmlib): cleanup
- 12:16 PM Revision c14761c5 (cdmlib): ref #9272 remove invalid state from nom. ambig. and nom. confus.
- 12:13 PM Revision 0edc55f4 (cdmlib): ref #9272, ref #5794 adapt taxon ordering to nomenclatural standing
- 12:13 PM Revision 1d9b1314 (cdmlib): cleanup
- 11:50 AM Revision e84897d0 (taxeditor): adapt biocase import views
- 11:44 AM Revision 3370888f (cdmlib): add termNodeDto to list of terms of termTreeDto
- 11:36 AM Revision 8ae425dd (cdmlib): add classification to config string
- 11:00 AM Revision d0b9755a (taxeditor): ref #9266: layout issues
- 10:37 AM feature request #5795: [DISCUSS] Do we need comb. ined. as a nomenclatural status?
- The status has been implemented a couple of years ago so
- 08:54 AM Revision 196b09e5 (taxeditor): ref #9266: remove more section in nomenclatural source and keep protologue label
- 08:38 AM Revision ccdf755b (taxeditor): remove max number of elements in combo boxes
11/23/2020
- 10:12 PM Revision 9e82c512 (cdmlib): ref #9279 remove redundant string and TaggedText computing and fix post separator for names type sets
- 10:10 PM Revision 88317626 (cdmlib): cleanup
- 09:14 PM Revision 317bee5c (cdmlib): cleanup
- 08:24 PM bug #9312: NullPointerException (NPE) in TaxonNamePopupEditor
- As this is a milestone interal ticket only I remove the target version
- 01:04 PM bug #9312 (Closed): NullPointerException (NPE) in TaxonNamePopupEditor
- confirmed! the commit:374e76ca85 for #6581 fixes this issue
- 04:06 PM task #9265 (In Progress): Adapt dataportal to new protologue handling
- There is no specific web service for protologues so only the dataportal needs to be adapted.
- 02:10 PM bug #8833 (Duplicate): distribution editor: Exception when filtering by taxon
- tested at the example of http://test.e-taxonomy.eu/cdmserver/cichorieae/app/distribution#!distGrid
could not repro... - 01:17 PM bug #9317 (New): Handle NameTypeDesignations on name basis not on homotypic group basis in outputs
- WGB:
Bei Gattungen und infragenerischen Rangstufen, die auf anderen Namen basieren wird [...] eine Kombination (Ar... - 09:56 AM feature request #9316: Add preference to define number of initialy shown elements in drop down menus
- As such dropdowns exist at many places we should have a predicate like "number of rows in dropdown" and define which ...
- 08:54 AM feature request #9316 (New): Add preference to define number of initialy shown elements in drop down menus
- mail ERS:
Bei der Auswahl des Distribution Status im Details View habe ich ein scroll-down-Menü, welches mir aber ... - 09:44 AM bug #6757 (Worksforme): AbcdImportWizard has all configurator flags set to false
- no, this is fixed in the meantime
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