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From 04/06/2020 to 05/05/2020

05/05/2020

10:22 PM bug #8999 (Closed): Verbatim date not persisted for books
WGB:
in einem Buch (konkret hier: Hartmann, H. E. K., Illustrated Handbook of Succulent Plants: Aizoaceae F-Z. 200...
Andreas Müller
03:34 PM feature request #8883: additional media list services as iiif manifest service
moving to next milestone and lowering priority.
The fsi image viewer is only used in the taxon page so there switc...
Andreas Kohlbecker
03:13 PM bug #8754 (In Progress): DescriptionElements are not deleted with the Descriptive Data Set
the deletion of larger datasets takes some time, therefore it is implemented as a long running task now. Need to test... Katja Luther
10:31 AM bug #8754 (Resolved): DescriptionElements are not deleted with the Descriptive Data Set
A new method for deletion of descriptive datasets are implemented, which uses DescriptionService.deleteDescription() ... Katja Luther
03:01 PM bug #8998: Terms created by abcd import should always be part of a vocabulary
Is this fixed and should be reviewed? Andreas Müller
03:01 PM bug #8998: Terms created by abcd import should always be part of a vocabulary
AM:
in algaterra_new gibt es eine Reihe DNA Marker Terme (z.B. „18S V4 rRNA“). Diese sind alle am 28.2.2020 erstel...
Andreas Müller
11:49 AM bug #8998 (Resolved): Terms created by abcd import should always be part of a vocabulary
In abcd import dnaMarker are created if not existing, they are not added to a vocabulary, but should. The vocabulary ... Katja Luther
01:58 PM bug #6282 (Rejected): FSI image viewer not working with https
no longer needed now that we integrated the universal viewer Andreas Kohlbecker
01:53 PM feature request #8968: filter Bulk editor for created by
@ Katja: Services müssten doch alle verfügbar sein?! Kannst Du den Arbeitsaufwand für eine Implementierung abschätzen... Wolf-Henning Kusber
12:16 PM feature request #8888 (Closed): responsive width for universal viewer
Andreas Kohlbecker
12:16 PM feature request #8888 (Resolved): responsive width for universal viewer
Applied in changeset commit:cdm-dataportal|2020828c0746e826bc31cb010b4c17c4bac5eb94. Andreas Kohlbecker
12:15 PM Revision 2020828c (cdm-dataportal): fix #8888 adapting uv width to parent div width
Andreas Kohlbecker
11:40 AM Revision dec805d6 (cdmlib): fix dnaMarker creation, add to vocabulary
Katja Luther
11:13 AM Revision d0618dd7 (cdm-vaadin): ref #8986 setting up maven-enforcer-plugin with fail=false
Andreas Kohlbecker
11:13 AM Revision 6ec49f60 (cdm-vaadin): cleaning up code and fixing typo in term title
Andreas Kohlbecker
10:56 AM bug #8752 (In Progress): Matrix Editor: Can fail showing all SpecimenDescriptions in the dataset
I could not reproduce this problem, sometimes an exception is thrown because the creation of the row failed, then the... Katja Luther
10:26 AM Revision af46e1a1 (cdmlib): ref #8754: implement delete method for descriptiveDataSet
Katja Luther
10:18 AM feature request #8997 (New): Improve display of classifications and non taxon names in search res...
Walter suggested:
Im Suchresultat wird nach dem Namen immer Leerzeichen Doppelpunkt Leerzeichen Klassifikationsnam...
Andreas Kohlbecker
08:25 AM Revision f8a489fd (cdm-dataportal): removing unused js library reference
Andreas Kohlbecker

05/04/2020

12:50 AM task #8996 (Closed): Import Flora of Uzbekistan taxa
Andreas Müller
12:41 AM Revision e61edee4 (cdmlib-apps): ref #8978 adapt app-import to StatisticalMeasurementValue.value ...
Andreas Müller
06:53 PM bug #8995 (New): Guarantee a term always has a vocabulary
Some production databases do have terms which are not attached to vocabularies.
This has multiple reasons.
In gen...
Andreas Müller
06:31 PM Revision 8370de0b (cdm-vaadin): cleanup
Andreas Müller
05:08 PM bug #8754: DescriptionElements are not deleted with the Descriptive Data Set
Deleting the descriptive dataset calls the delete method of IdentifiableServiceBase, but should be an extra delete me... Katja Luther
05:04 PM bug #8806 (In Progress): Multiple representations problem on saving Desriptive Data Set
Could not reproduce the problem anymore, but needs further testing. Katja Luther
02:18 PM bug #8806: Multiple representations problem on saving Desriptive Data Set
this seems to be related to open the same descriptive dataset in descriptive dataset editor and in character matrix. ... Katja Luther
05:02 PM Revision defea9e9 (taxeditor): ref #8806: bind session to matrix editor when opening and focus
Katja Luther
03:56 PM bug #8994: universal image viewer fails loading libs when clean urls is disabled
check if it is also working on the test server Andreas Kohlbecker
03:56 PM bug #8994 (Resolved): universal image viewer fails loading libs when clean urls is disabled
Applied in changeset commit:cdm-dataportal|6c1a67120fd6c9fc5076137ff183a57f01e37827. Andreas Kohlbecker
03:27 PM bug #8994 (In Progress): universal image viewer fails loading libs when clean urls is disabled
with `clean-urls = false`, this file is found
http://edit.test/d7/cyprus/sites/cyprus/modules/cdm_dataportal/js/u...
Andreas Kohlbecker
03:23 PM bug #8994 (Closed): universal image viewer fails loading libs when clean urls is disabled
* This url works: http://edit.test/d7/cyprus/cdm_dataportal/taxon/2e58b1ab-03a9-4693-bcec-3b8e7f04b572/images
* this...
Andreas Kohlbecker
03:56 PM Revision 6c1a6712 (cdm-dataportal): fix #8994 adapting universalviewer_path according to clean ur...
Andreas Kohlbecker
03:16 PM bug #8900 (Closed): Layout issues with new image viewer
Andreas Kohlbecker
03:15 PM bug #8900 (Resolved): Layout issues with new image viewer
Applied in changeset commit:cdm-dataportal|16f4ad91e5dc8bac561e7bee5bc11c4041676281. Andreas Kohlbecker
03:15 PM Revision 16f4ad91 (cdm-dataportal): fix #8900 setting UV width from parent div
Andreas Kohlbecker
01:39 PM bug #8662: "Remove Taxon" in DescriptiveDataSetEditor should only be visible if taxon is selected
now the menu item is available only if the selection is a taxon node, so it should show up, only when the node can be... Katja Luther
01:28 PM bug #8662 (Resolved): "Remove Taxon" in DescriptiveDataSetEditor should only be visible if taxon...
Applied in changeset commit:taxeditor|b529af0445dcd7025081ff2c1c40926a29f9d79c. Katja Luther
01:29 PM Revision b529af04 (taxeditor): fix #8662: adapt canExecute to show remove taxon only when top lev...
Katja Luther
12:12 PM feature request #4837 (Closed): responsive layout & theme
the review for this ticket is over due since 4 years.
I am closing the issue now.
Andreas Kohlbecker
11:50 AM feature request #4488 (Closed): Specimen data points in map should show FieldUnit information
Andreas Kohlbecker
11:50 AM feature request #6113 (Closed): webservice to expose FieldUnits related to a Taxon or TaxonName a...
ticket complete, I think reviewing by someone else is not needed, therefor I am closing this ticket directly. Andreas Kohlbecker
11:48 AM feature request #8972 (Closed): integrate kml layers into map viewer
no problems found in the flora cuba which could be caused by the change to the `zoomToClosestLevel = false` setting.... Andreas Kohlbecker
11:41 AM Revision a25116e0 (cdm-dataportal): fixing broken font awesome loading icon in map
Andreas Kohlbecker
11:40 AM Revision 199e1e3d (cdm-dataportal): removing unused js library reference
Andreas Kohlbecker
10:44 AM Revision 1c376cd7 (cdmlib): cleanup classification controller
Andreas Müller
10:41 AM Revision 39f8b71e (cdmlib): ref #1447 implement getNameCache
Andreas Müller
10:29 AM Revision 2767101c (cdmlib): cleanup
Andreas Müller
10:26 AM feature request #8993 (New): suppress the map in name pages and registration pages if there are n...
copied from #8972
suppress the map in name pages and registration pages if there are no locations to display
Fo...
Andreas Kohlbecker
10:20 AM Revision 43c5bf8b (cdm-dataportal): ref #8972 refactoring: moving map compose method into maps.in...
Andreas Kohlbecker
09:59 AM bug #8816 (Feedback): NoSuchElementException during adding Specimens to Matrix Editor
I cann't reproduce this exception, could you remember what you did before? Katja Luther
09:31 AM feature request #8855: Show error radius in EDIT portal
Super! Danke & das hilft allen Projekten, die Karten zeigen! Wolf-Henning Kusber
09:23 AM feature request #8855 (Closed): Show error radius in EDIT portal
Fully implemented, please see http://test.e-taxonomy.eu/dataportal/preview/phycobank/cdm_dataportal/registration/http... Andreas Kohlbecker
09:29 AM bug #3169 (Rejected): Maps, Specimens: error openlayers.js due to point map in portal
this issue is for sure no longer relevant as we switched to a completely different technology for showing specimen ma... Andreas Kohlbecker
08:46 AM task #8840: display identifiers in the dataportal
Hallo,
zu diesem Punkt:
Also consider possibility (configurable) to display WFO- and IPNI- Name Identifiers as ...
Andreas Kohlbecker
08:41 AM task #8992 (New): Configure Apache to treat dataportal URLs as case insensitiv
This should be configurable by using the spelling module:
~~~
LoadModule speling_module modules/mod_speling.so
...
Andreas Kohlbecker

04/30/2020

11:53 AM bug #8903 (Resolved): Remember expansion state in factual data view
This should be fixed now. Please review. Katja Luther
11:52 AM Revision 39fb1444 (taxeditor): ref #8903: fix remember expand level in factual data view
Katja Luther
11:40 AM feature request #8991 (Resolved): Add feature "Flowering Period"
Applied in changeset commit:cdmlib|dfdb2bfddf5df2fa7b0ba256c6ec0779aafd5f9a. Andreas Müller
11:37 AM feature request #8991 (Closed): Add feature "Flowering Period"
Andreas Müller
11:39 AM Revision dfdb2bfd (cdmlib): fix #8991 add Feature flowering season
Andreas Müller
11:25 AM Revision 9287a99d (cdmlib): minor on ConcurrentSessionTest.xml
Andreas Müller
11:21 AM Revision f9956144 (cdmlib): cleanup
Andreas Müller
10:17 AM feature request #8990 (Closed): Implement flowering periods (temporal facts) in TaxEditor
This includes
* ~~a new field "supportsTemporalData" in the Feature details view~~
* ~~a new details view for th...
Andreas Müller
10:16 AM feature request #8989 (New): Implement flowering periods (temporal facts) in dataportal
For the beginning a text based representation should be enough.
Later a visual representation like in http://flora...
Andreas Müller

04/29/2020

03:57 PM feature request #8972 (Resolved): integrate kml layers into map viewer
this is complete now. BUT it was necessary to set `zoomToClosestLevel = false`
Which as been introduced for #5683 wi...
Andreas Kohlbecker
03:16 PM feature request #8972 (In Progress): integrate kml layers into map viewer
Andreas Kohlbecker
03:54 PM feature request #8988 (Closed): Add link button to DOI field for references
Same as for URL field Andreas Müller
03:53 PM Revision 108f1865 (cdm-dataportal): ref #4257, ref #8972 setting zoomToClosestLevel = false to pr...
Andreas Kohlbecker
03:30 PM feature request #4488: Specimen data points in map should show FieldUnit information
this is now complete Andreas Kohlbecker
03:28 PM Revision d5c5cd81 (taxeditor): fix #8954: fix expansion state
Katja Luther
03:27 PM bug #8954: Details and Supplemental Data View do not save the expansion state of sections again
this should be fixed, please review. Katja Luther
03:27 PM bug #8954 (Resolved): Details and Supplemental Data View do not save the expansion state of secti...
Applied in changeset commit:taxeditor|d5c5cd81ed72f663241798765e14082cb3ea522c. Katja Luther
03:25 PM feature request #4257 (Closed): specimen map should zoom to area of distribution
Andreas Kohlbecker
03:23 PM Revision 64f6df71 (cdm-dataportal): ref #4257, ref #8972 zooming map to kml layer feature bounds
Andreas Kohlbecker
02:31 PM feature request #8978 (Resolved): Implement measurement values as BigDecimal
Andreas Müller
02:06 PM Revision 34dba7f7 (taxeditor): fix #8958: add additional rows to reference bulk editor - continue
Katja Luther
02:05 PM feature request #8958: Add publication year, inReference (journal), and URI to reference bulk editor
please review Katja Luther
02:00 PM feature request #8958 (Resolved): Add publication year, inReference (journal), and URI to referen...
Applied in changeset commit:taxeditor|1391e8f98560e8415f6b48b0476a45ef1b6b94bb. Katja Luther
02:02 PM Revision 1391e8f9 (taxeditor): fix #8958: add additional rows to reference bulk editor
Katja Luther
01:53 PM Revision 7844642a (cdm-dataportal): ref #8972 switching type_designations_maps to kml
Andreas Kohlbecker
01:52 PM Revision a0880292 (cdmlib): ref #6113 more kml web services and a missing name service method
Andreas Kohlbecker
12:08 PM bug #8969 (Resolved): Multiple deduplications are not executed
Katja Luther
12:08 PM bug #8969 (New): Multiple deduplications are not executed
The first solution is implemented, please review. Katja Luther
11:36 AM bug #8969 (Resolved): Multiple deduplications are not executed
Applied in changeset commit:taxeditor|170f6932192925c4e5671309e2da88d4b61cd3f3. Katja Luther
11:58 AM Revision ef1e39dd (taxeditor): fix #8969: externalize strings
Katja Luther
11:57 AM Revision 7ee568a3 (cdmlib): ref #8986 solving atrifact version conflict
Andreas Kohlbecker
11:45 AM task #8986 (Closed): use Maven Enforcer plugin to check for dependency version conflics and to en...
done for all listed projects.
cdm-vaadin still has conflicts but this will be handled in another ticket: #8987
Andreas Kohlbecker
11:39 AM task #8986 (In Progress): use Maven Enforcer plugin to check for dependency version conflics and ...
Andreas Kohlbecker
10:22 AM task #8986 (Closed): use Maven Enforcer plugin to check for dependency version conflics and to en...

Links:
* http://maven.apache.org/enforcer/maven-enforcer-plugin/index.html
* Usage: http://maven.apache.org...
Andreas Kohlbecker
11:44 AM task #8987 (New): manage dependencies to resolve version conflicts
see the report in the output of `mvn validate` for existing conflicts
The `fail=true` for the Maven Enforcer plug...
Andreas Kohlbecker
11:38 AM Revision ba1a280e (cdmlib): ref #8986 maven-enforcer-plugin: fail=true and re-enabling maven ver...
Andreas Kohlbecker
11:37 AM Revision 79f4724d (cdmlib): ref #8986 maven-enforcer-plugin: fail=true and re-enabling maven ver...
Andreas Kohlbecker
11:34 AM Revision 170f6932 (taxeditor): fix #8969: add third button for continue without saving
Katja Luther
11:34 AM Revision bdda8f90 (cdm-webapp): ref #8986 setting up maven-enforcer-plugin with fail=true
Andreas Kohlbecker
11:13 AM Revision c5d02ae1 (cdmlib): ref #8986 maven enforcer plugin: disabling maven version test
Andreas Kohlbecker
11:09 AM Revision 97b44db6 (cdmlib): ref #8986 managing all conflicting artifact versions
Andreas Kohlbecker
10:26 AM Revision ca837203 (cdmlib): ref #8986 setting up maven-enforcer-plugin for all cdmlib modules
Andreas Kohlbecker
09:36 AM Revision fcdb23af (cdmlib): ref #6113, ref #8985 adding replacement OPTIONS service only for the ...
Andreas Kohlbecker
09:34 AM task #8985 (New): Enable the general controller for OPTIONS requests
The `eu.etaxonomy.cdm.remote.controller.OptionsController` had to be disabled and was replaced by `eu.etaxonomy.cdm.r... Andreas Kohlbecker

04/28/2020

05:40 PM Revision 30ae270f (cdmlib): ref #6113 tempororily disabling the OptionsController
Andreas Kohlbecker
05:10 PM Revision 98fe0c12 (cdmlib): ref #6113 fxing NPE
Andreas Kohlbecker
05:01 PM Revision 09b9fc11 (cdmlib): excluding org.eclipse.emf dependencies
Andreas Kohlbecker
05:00 PM Revision 57ece50a (cdmlib): adding maven-enforcer-plugin commented
Andreas Kohlbecker
02:21 PM bug #8328 (Closed): Unpublished record visible in Portal if related name is published
Checked in both portals.
Navicula insula, Ulva olivacea.
Function tested with Basionym (publ.), 1. new combination ...
Wolf-Henning Kusber
02:09 PM bug #8984 (New): Format display of two type specimens
Description: 1 type is displayed and a dot is added by the system: fine.
Description of the issue: First type is dis...
Wolf-Henning Kusber
01:51 PM feature request #8980: Type specimen editor, collection data field misused by users
Please check wording. Wolf-Henning Kusber
11:46 AM feature request #8983: authors and team in combopox better distinguishable
estimate effort first! Andreas Kohlbecker
11:45 AM feature request #8983 (New): authors and team in combopox better distinguishable
we discussed two options:
1. show all atomized data in the select list
2. show all atomized data when an item is ...
Andreas Kohlbecker
10:29 AM Revision 1ef5371d (cdmlib): using embedded jetty in launcher
Andreas Kohlbecker
10:28 AM Revision dfe8c2de (cdmlib): ref #6113, ref #4488 de-duplicating field units
Andreas Kohlbecker
10:22 AM Revision 2871509d (cdm-dataportal): ref #8972, ref #8855, ref #4488 modified representation of fi...
Andreas Kohlbecker

04/27/2020

05:05 PM Revision b74054d7 (taxeditor): updating README
Andreas Kohlbecker
03:57 PM feature request #8982 (New): Check duplicates in author teams
If identical authorteams are selected twice, it would be great to see a WARN before saving the duplicate.
"This au...
Wolf-Henning Kusber
03:51 PM feature request #8981 (New): Improve NameStatus in UI
To improve the name status entry in Vaadin UI it is proposed to show the fields only if requested.
rename:
Status...
Wolf-Henning Kusber
02:49 PM feature request #8980 (New): Type specimen editor, collection data field misused by users
In PhycoBank Type specimen editor the field "Collection" was left open, the field "Access. num." was filled with the ... Wolf-Henning Kusber
02:42 PM feature request #8979 (New): Prevent misuse of field initial for personal names
Problem in PhycoBank: Field "inital" was used for Intial of given name and inital of family name (without dots).
The...
Wolf-Henning Kusber
10:26 AM Revision d9292dce (taxeditor): ref #8857: move taxon creation to server - continue
Katja Luther

04/25/2020

08:21 PM feature request #8978 (Closed): Implement measurement values as BigDecimal
for details on how to do different scaling see also #4499#note-1 Andreas Müller

04/24/2020

09:45 PM Revision 7af31945 (cdmlib): revert small changes
Katja Luther
04:07 PM feature request #6416: Change sortindex of keynodes
Katja Luther wrote:
>Sometimes it is needed that the alternatives of a polytomous key node are sorted in a different...
Andreas Müller
03:00 PM Revision 68676332 (cdmlib): revert small changes
Katja Luther
02:54 PM Revision e1e79987 (taxeditor): ref #8969: prior deduplication is saved when clicking ok
Katja Luther
02:37 PM Revision 249f2a3d (cdmlib): ref #8857: createTaxonDto as parameter for taxon creation - continue
Katja Luther
02:28 PM Revision 2c6df741 (taxeditor): ref #8857: move taxon creation to server
Katja Luther
02:24 PM Revision d4b8e272 (cdmlib): ref #8857: createTaxonDto as parameter for taxon creation
Katja Luther
11:07 AM Revision 988b213a (cdm-server): adapt maven min version and cleanup
Andreas Müller
10:59 AM Revision 150f62d9 (taxeditor): cleanup
Andreas Müller
10:58 AM Revision 43e0aadd (cdm-server): Revert "ref #6113 OSGeo Repository to CDM Server"
This reverts commit ad6c5f7d371005ab61f56e76060431eb82c0a82c. Andreas Müller

04/23/2020

06:40 PM Revision 31504d6a (cdm-webapp): Revert "ref #6113 add OSGeo Repository to cdm-webapp"
This reverts commit 3c12d463d957bca4213eb8eb0d0a0875a42df7ed. Andreas Müller
06:39 PM Revision 1eb2de87 (cdm-vaadin): Revert "ref #6113 add OSGeo Repository to vaadin"
This reverts commit 3ec5217256dfde494c2380a902848313be3e6863. Andreas Müller
06:08 PM Revision 3c4f9241 (cdmlib): Revert "ref #6113 temporarily remove kmlMarshaller"
This reverts commit d591d6d83894d7a93fd2fd4295f3314c69cbc7d6. Andreas Müller
06:08 PM Revision 533b841a (cdmlib): ref #6113 exclude old jaxb version dependencies from JavaAPIforKml
Andreas Müller
05:05 PM Revision 292150f8 (cdmlib): cleanup
Andreas Müller
05:03 PM Revision d591d6d8 (cdmlib): ref #6113 temporarily remove kmlMarshaller
Andreas Müller
05:02 PM Revision 3cf31dea (cdmlib): Revert "ref #6113 temporarily remove kmlMarshaller"
This reverts commit 6a4d8b86f4322567cc0d52f04270a9903dfe026b. Andreas Müller
04:50 PM Revision 6a4d8b86 (cdmlib): ref #6113 temporarily remove kmlMarshaller
Andreas Müller
04:32 PM Revision 3c12d463 (cdm-webapp): ref #6113 add OSGeo Repository to cdm-webapp
Andreas Müller
04:21 PM Revision 3ec52172 (cdm-vaadin): ref #6113 add OSGeo Repository to vaadin
Andreas Müller
04:03 PM Revision ad6c5f7d (cdm-server): ref #6113 OSGeo Repository to CDM Server
Andreas Müller
11:10 AM feature request #8977 (New): Allow filtering webservices on multiple taxon subtrees
WGB:
Noch eine Frage: Ist es möglich, zwei Familien in ein Portal einzuschließen, auch wenn diese keinen exklusiven ...
Andreas Müller

04/22/2020

07:36 PM bug #8976 (New): error in tagged_text_extract_reference_and_detail()
see http://test.e-taxonomy.eu/dataportal/preview/caryophyllales_spp/cdm_dataportal/polytomousKey/f36b96a1-925b-463d-b... Andreas Kohlbecker
07:07 PM feature request #8975 (New): Name Status filtered in UI
In PhycoBank Vaadin, all available status can be selected.
For PhycoBank just a few nomenclatural status are relevan...
Wolf-Henning Kusber
06:21 PM feature request #8657 (Closed): Order description element in portal according to CharacterTree
I move the indentation issue to #8798 as it fits better there. And close this ticket. Andreas Müller
06:12 PM feature request #8657 (Feedback): Order description element in portal according to CharacterTree
~~Andreas K., can you please check if the existing identation is caused by (wrong) handling of tree hierarchy or by a... Andreas Müller
05:49 PM feature request #8657: Order description element in portal according to CharacterTree
Currently only a flat list is created. I opened a new ticket to discuss if also the hierarchical structure should be ... Andreas Müller
05:41 PM feature request #8657: Order description element in portal according to CharacterTree
Maybe this ticket also covered the "freetext" description ordering like on http://caryophyllales.org/cactaceae/cdm_da... Andreas Müller
05:39 PM feature request #8657: Order description element in portal according to CharacterTree
Example URL is: http://caryophyllales.org/cactaceae/cdm_dataportal/description/f4fc4b11-90c7-4a02-b236-2d58f5891e6e Andreas Müller
06:19 PM feature request #8798: description page: Show character hierarchy
Andreas K., can you please check if the existing identation is caused by (wrong) handling of tree hierarchy or by a w... Andreas Müller
06:19 PM feature request #8798: description page: Show character hierarchy
This seems to be closely related to #8657 Maybe it is even a duplicate. Andreas Müller
06:13 PM bug #8766 (Closed): Aggregated Descriptions: show Sample size as [$SAMPLE_SIZE]
This seems to be fully and correctly implemented. Norbert, please reopen if you think there are open issues. Andreas Müller
06:01 PM task #8974 (New): [DISCUSS] Should freetext descriptions reflect the feature tree hierarchy and/o...
Same as #8973 but for the "freetext" descriptions like in http://caryophyllales.org/cactaceae/cdm_dataportal/taxon/b1... Andreas Müller
05:47 PM task #8973 (New): [DISCUSS] Should description tables reflect the feature tree hierarchy and/or e...
Currently description tables are flat list which are ordered according to the related feature tree but do not show th... Andreas Müller
05:40 PM feature request #6113 (In Progress): webservice to expose FieldUnits related to a Taxon or TaxonN...
Andreas Kohlbecker
05:29 PM feature request #8855 (Resolved): Show error radius in EDIT portal
solved even if not all kml web services are available. Therefore the display of error radius is not possible for all ... Andreas Kohlbecker
05:17 PM feature request #8972 (Closed): integrate kml layers into map viewer
Andreas Kohlbecker
05:09 PM feature request #8972 (Closed): integrate kml layers into map viewer
use the output from #6113 in the data portal
* extend openlayers_map.js and map.inc to support kml layers provided...
Andreas Kohlbecker
05:15 PM feature request #4488 (Resolved): Specimen data points in map should show FieldUnit information
once this is available in the test portal we need to gather feedback from users (corvids, campanula, algaterra, phyco... Andreas Kohlbecker
05:12 PM Revision c1fc969a (cdm-dataportal): ref #8972, ref #8855, ref #4488 using kml response to show sp...
Andreas Kohlbecker
05:06 PM Revision e8b0cf59 (cdmlib): developer doc for LifeCycle management
Andreas Kohlbecker
05:06 PM Revision c795a3a1 (cdmlib): ref #6113 dependencies for gis and kml functionality
Andreas Kohlbecker
05:06 PM Revision 5f5cfe6a (cdmlib): ref #6113 producing more complete kml for DerivedUnits & general cont...
Andreas Kohlbecker
12:24 PM bug #8970: Moving a taxon to another position often closes the parent nodes
WGB:
ja, mit „nach oben in der Hierarchie“ meinte ich zum Elter, nach unten in ein anderes Kind (wie im Beispiel).
...
Andreas Müller
11:56 AM bug #8970 (New): Moving a taxon to another position often closes the parent nodes
When moving a taxon to another parent taxon node in the taxon navigator the new and the old taxon nodes are often clo... Andreas Müller
12:23 PM bug #8971 (New): Long running tasks in taxon navigator should disable the navigator
WGB:
Ein [...] Problem ist, dass während dieses Prozesses (der manchmal etwas dauern kann) ein Doppelklick auf einen...
Andreas Müller
12:04 PM feature request #8777: Make visiblity of CDM Source configurable
CDM Source has primarily been introduced by additivity but it has negative impacts on other DBs. Therefore I add the ... Andreas Müller
11:58 AM bug #8832: Choosing the area for distribution in details view clears the selected status
So I guess we should move it back to 5.13 Andreas Müller
11:10 AM bug #8832 (Resolved): Choosing the area for distribution in details view clears the selected status
this was already solved with Revision 5a9bfdf8. Katja Luther
09:28 AM bug #8969: Multiple deduplications are not executed
AM:
Ich habe es selber gerade getestet und es ist reproduzierbar. Vermutlich wird die Meldung vor der zweiten Dedu...
Andreas Müller
09:24 AM bug #8969 (Closed): Multiple deduplications are not executed
If you deduplicate (e.g. in reference bulk editor) a group of references and than without saving try to deduplicate a... Andreas Müller

04/21/2020

02:41 PM feature request #8968 (New): filter Bulk editor for created by
Taxonomic Editor: Bulk editor
Feature request for: filter for "created by"
This would allow to find systematic ...
Wolf-Henning Kusber
02:38 PM feature request #8595 (Closed): Create description detail page
All the rest seems to be fixed or even improved in the meanwhile. So I close this ticket. Andreas Müller
02:37 PM feature request #8595: Create description detail page
Geklonte SpecimenDescription brauchen Datum und Dataset im Titel => this is not yet fully implemented. Created new ti... Andreas Müller
02:36 PM feature request #8967 (New): Improve label for cloned descriptions
... and maybe also other descriptions.
From #8595: "Geklonte SpecimenDescription brauchen Datum und Dataset im Tit...
Andreas Müller
02:29 PM bug #8779 (Closed): Description page: use render_taxon_or_name() for creating the page and descri...
Looks like this is fully fixed. Norbert, please reopen if there is an open issue with naming of taxa and names on the... Andreas Müller
02:27 PM bug #8739 (Closed): remaining issues for description detail page
This all seems to be implemented or moved to other tickets. Norbert, please reopen if you think some issues are not f... Andreas Müller
02:13 PM bug #8966 (New): Name page: show types of related names as running text with the related name
Example names:
* Navicula capitata Ehrenb (https://www.phycobank.org/cdm_dataportal/name/6b6539cd-9cb8-4748-9130-a...
Andreas Kohlbecker
12:51 PM feature request #8758 (Closed): Aggregated Descriptions: order states by frequency
I checked for Rhipsalis (http://caryophyllales.org/cactaceae/cdm_dataportal/taxon/b15ec01d-b909-4143-b197-e752b6f34d5... Andreas Müller
12:44 PM feature request #8803 (Closed): Add "per mm²" to measurement units
I checked on an old DB like globis and the new value is available there, too. So I close this ticket. Andreas Müller
11:43 AM feature request #8208: Allow selecting property modifiers when creating a character
I suggest to implement this only when we realize that we really need it. Andreas Müller
11:40 AM feature request #8003: [DISUCSS] Implement "Export" on sub tree of FeatureTrees
Probably we will not manage to implement this in 5.15. We also need to discuss who should work on it and how importan... Andreas Müller
11:38 AM feature request #8453: Improve performance of DescriptiveDataSet
This is probably a major task which can not be handled in 5.15. We also need to discuss who should work on it. Andreas Müller
11:35 AM feature request #7675: Make columns with default values togglable
Can you please check how work intensiv this is? Andreas Müller
11:34 AM feature request #7580 (In Progress): User wishes: CharacterMatrix
The status of this ticket to me is unclear. There are some commits so I guess it is at least in progress.
I don't k...
Andreas Müller
11:21 AM feature request #8529: [DISCUSS]Display of aggregated descriptions
This ticket is very vague and maybe it is completely handleded in other tickets already.
The first part of the des...
Andreas Müller
11:15 AM bug #8903: Remember expansion state in factual data view
Moving to additivity milestone. But in general remembering of expansion state currently does not work correctly in th... Andreas Müller
11:13 AM feature request #8775: Improve (rapid) data entry into characater matrix for categorical data
Moving to additivity milestone Andreas Müller
11:12 AM feature request #8902: Add "open in" menu to row menu in matrix editor
moving to additivity milestone Andreas Müller
11:11 AM feature request #7774: Show description source for description elements
Moving to additivity milestone Andreas Müller
11:10 AM feature request #8742: Allow deleting vocabularies
5.15 is considered to be an additivity milestone. Therefore I move it to this milestone. Andreas Müller
10:47 AM bug #8510: Non unique object exception when creating FeatureStates
We should check if this is still an open issue and/or if it related to any other of the term tree editing issues Andreas Müller
10:36 AM bug #8959: Moving a synonym to the homotypical group of the accepted taxon opens the context menu...
Andreas Müller wrote:
> I did not review yet (editor is still building) but forgot to mention in the description tha...
Katja Luther
10:20 AM bug #8959: Moving a synonym to the homotypical group of the accepted taxon opens the context menu...
I did not review yet (editor is still building) but forgot to mention in the description that also removing a synonym... Andreas Müller
09:57 AM bug #8959: Moving a synonym to the homotypical group of the accepted taxon opens the context menu...
Now the focus is set explicitly to the moved synonym, so the context menu should be correct. please review Katja Luther
09:44 AM bug #8959 (Resolved): Moving a synonym to the homotypical group of the accepted taxon opens the c...
Applied in changeset commit:taxeditor|764151afe45bda26527cd591324959cae397eb70. Katja Luther
10:16 AM task #8957 (Closed): Rename "unexpected error" to "unhandled error"
this seems to be correct. Katja Luther
10:08 AM bug #8961 (Resolved): Using the selection dialogue for nomenclatural references removes the recen...
please review
Katja Luther
10:05 AM Revision 6a56588d (taxeditor): fix #8962: check for disposed section
Katja Luther
10:05 AM bug #8962: Handle widget is disposed after closing Supplemental Data View
please review Katja Luther
10:04 AM bug #8962 (Resolved): Handle widget is disposed after closing Supplemental Data View
Applied in changeset commit:taxeditor|6a56588d99aa57e6da57bad3def7b9e376cc4466. Katja Luther
09:45 AM Revision 764151af (taxeditor): fix #8959: set focus to synonym after moving synonym to other homo...
Katja Luther
09:09 AM Revision 3580c856 (taxeditor): use copy icon for clone button in name details view
Katja Luther

04/20/2020

07:14 PM bug #8965 (New): Separator missing for aggregated descriptions of higher character tree nodes
In the aggregated descriptions freetext separators are missing in front of the text belonging to character nodes of h... Andreas Müller
06:33 PM bug #8857: NonUniqueObjectException when creating new taxon
There is a very similar case which has a secundum reference and a nomenclatural reference in common (not only authors... Andreas Müller
06:32 PM Revision c2724256 (taxeditor): fix #8034: calling nomenclatural ref selection dialog should not d...
Katja Luther
06:30 PM Revision 2d440e1c (cdmlib): ref #8857 NonUniqueObjectException test for new taxon with shared ref...
Andreas Müller
06:13 PM bug #8963: Selection dialogues should be modal
Don't know why the shell style was set to SWT.DIALOG_TRIM. This is fixed now. Katja Luther
06:10 PM bug #8963 (Resolved): Selection dialogues should be modal
Applied in changeset commit:taxeditor|5893c96f9e864a5206112771215a6f699ffa7977. Katja Luther
04:18 PM bug #8963: Selection dialogues should be modal
NaK:
ich mache folgendes
- sec ref. für das akzeptierte Taxon ändern. Das Details view zeigt die neue sec. ref. ric...
Andreas Müller
04:15 PM bug #8963 (Closed): Selection dialogues should be modal
Currently it is possible to edit data in other parts of the TaxEditor if a selection dialogue is opened. This may lea... Andreas Müller
06:10 PM Revision 5893c96f (taxeditor): fix #8963: selection dialogs should be modal
Katja Luther
05:28 PM bug #8964: Improve label for homonym relationships
~~~ SQL
UPDATE DefinedTermBase
SET titleCache = 'is later homonym of'
WHERE uuid = '80f06f65-58e0-4209-b811-cb4...
Andreas Müller
05:22 PM bug #8964 (In Progress): Improve label for homonym relationships
Implemented in csv files.
Still need to implement update script for 4 Representations and 2 DefinedTermBase.titleC...
Andreas Müller
05:19 PM bug #8964 (Closed): Improve label for homonym relationships
WGB:
Name relationships:
is later/earlier homonym “for” => “of”
===
Needed for "is later/earlier homonym for"...
Andreas Müller
05:20 PM Revision 469fa283 (cdmlib): ref #8964 later homonym for => of (changed in csv files)
Andreas Müller
03:06 PM bug #8962 (Closed): Handle widget is disposed after closing Supplemental Data View
WGB:
nach Schließen des Supplemental Data views.
Vorher: Synonym Wormia von Ancistrocladus Fokus auf Name gesetzt....
Andreas Müller
02:56 PM bug #8961 (Closed): Using the selection dialogue for nomenclatural references removes the recentl...
Selecting a nomenclatural reference for a TaxonName seems to delete the list of recently used references.
WGB:
We...
Andreas Müller
12:25 PM feature request #8960 (New): Use explicit icon for accepted taxa being basionyms
Accepted taxa can now be flagged as basionyms in their homotypical group. But there is no icon yet that shows that th... Andreas Müller
12:16 PM bug #8959 (Closed): Moving a synonym to the homotypical group of the accepted taxon opens the con...
To reproduce:
* open a taxon which has a heterotypic synonym
* move this synonym to the homotypic group of the ac...
Andreas Müller
11:04 AM bug #4299: Show error when permission is denied ...
I think I chose this title because my concern was that permission errors are not shown in general (or at least at mul... Andreas Müller
10:21 AM bug #4299: Show error when permission is denied ...
I think we should change the subject of this issue to better reflect the details of this task.
Suggestion: *Adapt ...
Andreas Kohlbecker
10:46 AM feature request #6335: Providing the admin email for each server installation
I am changing the subject to avoid confusion of server installation with cdm instance Andreas Kohlbecker
10:22 AM feature request #8958: Add publication year, inReference (journal), and URI to reference bulk editor
WGB:
ich verbringe ja einen beträchtlichen Teil meiner Zeit mit dem Aufräumen von nomenklatorischen und bibliographi...
Andreas Müller
10:22 AM feature request #8958 (Closed): Add publication year, inReference (journal), and URI to reference...
Andreas Müller
10:00 AM feature request #7432: Show default login only if the account has not been changed
Andreas Müller wrote:
> Another solution could be to show the default password only if the host is localhost or if t...
Andreas Kohlbecker

04/17/2020

11:50 PM Revision 39c62a4a (cdmlib): cleanup
Andreas Müller
11:50 PM Revision 4e0742ba (cdmlib): ref #8857 adapt test for non-unique object exception
Andreas Müller
08:12 PM bug #8857 (In Progress): NonUniqueObjectException when creating new taxon
I created a test for the issue: TaxonNodeServiceImplTest.testSaveNewTaxonNode()
The problem seems to be a principa...
Andreas Müller
12:18 PM bug #8857: NonUniqueObjectException when creating new taxon
The error occurred again:
![](picture395-1.png)
The screenshot shows that the new taxon is using an author whic...
Andreas Müller
08:03 PM Revision e2ac6eb9 (cdmlib): cleanup
Andreas Müller
08:03 PM Revision a99c387f (cdmlib): ref #8857 test for non-unique object exception
Andreas Müller
07:59 PM feature request #8238 (Feedback): Allow interoperability between term trees
should we split this ticket? Andreas Müller
07:58 PM feature request #7981 (Feedback): Add configuration UI for matrix description aggregation
Andreas Müller
05:42 PM Revision 24e1f8d3 (cdmlib): cleanup
Andreas Müller
05:39 PM Revision 53bbff6f (cdmlib): cleanup RedmineRegistrationMessageServiceTest.xml
Andreas Müller
12:45 PM Revision 0fe66ef7 (cdmlib): cleanup
Andreas Müller
12:06 PM Revision 3720ed7b (taxeditor): cleanup
Andreas Müller
12:06 PM Revision 1d255789 (taxeditor): fix #8957 Replace "Unexpected error" by "Error" in title
Andreas Müller
11:49 AM task #8957: Rename "unexpected error" to "unhandled error"
I replaced now "This is an unexpected error" by "An error occurred". Please review. Andreas Müller
11:48 AM task #8957 (Resolved): Rename "unexpected error" to "unhandled error"
Applied in changeset commit:taxeditor|7b67db23d063fe89224e44874055487cdaff85b7. Andreas Müller
11:35 AM task #8957: Rename "unexpected error" to "unhandled error"
WGB:
ja, von mir aus – aber eigentlich sind das Aussagen, die nicht das USER interface sondern das developer interfa...
Andreas Müller
11:08 AM task #8957: Rename "unexpected error" to "unhandled error"
WGB:
„Unexpected Error“ und „This is an unexpected Error“ entbehrt nicht einer gewissen Komik, ich nehme an, die ist...
Andreas Müller
11:07 AM task #8957 (Closed): Rename "unexpected error" to "unhandled error"
Andreas Müller
11:48 AM Revision 7b67db23 (taxeditor): fix #8957 Replace "This is an unexpected error" by "An error occur...
Andreas Müller
11:44 AM Revision fb74fafe (taxeditor): cleanup
Andreas Müller
11:01 AM feature request #7432: Show default login only if the account has not been changed
WGB:
Und im Login-Dialog stolpere ich jedes mal über die Angabe des Defaults (admin, ...) – die ist doch klar unsi...
Andreas Müller
11:00 AM feature request #7432: Show default login only if the account has not been changed
Another solution could be to show the default password only if the host is localhost or if the instance is "localhost... Andreas Müller

04/16/2020

12:39 AM task #2342: Open issues for DwC-A export
Maybe still not the correct milestone but still better than the old one. Andreas Müller
12:11 AM feature request #4298 (Feedback): refresh views after changing rights
Is this still an open issue?
If yes, please let discuss which milestone to put it to, as the old milestone is closed.
Andreas Müller
12:07 AM feature request #3095 (Feedback): protect taxa and nodes
Please check what are the issues that are still open. Maybe split ticket afterwards into open and closed issues. Andreas Müller
12:05 AM feature request #3097 (Feedback): disable editors if a user has insufficient grants for a taxon o...
I am not sure if I understand what is meant here with "enabled".
Currently it seems possible to open a taxon but not...
Andreas Müller
11:42 PM Revision 0ebc7378 (taxeditor): cleanup
Andreas Müller
11:41 PM Revision 142a6b70 (taxeditor): ref #4306 remove camel case for GrantedAuthority labels
Andreas Müller
11:35 PM Revision 84527493 (taxeditor): cleanup
Andreas Müller
06:45 PM bug #4300 (Feedback): Authority form does not work under Windows
To me it looks like this ticket can be closed as worksforme even if the authority form is still not working very well... Andreas Müller
06:40 PM bug #4299: Show error when permission is denied ...
Also entering the New->Taxon dialog should not be possible as the dialog is fully disabled in this case anyway (but o... Andreas Müller
06:37 PM bug #4299: Show error when permission is denied ...
I move this to current milestone as we have more and more DBs with limited rights and therefore this issue becomes mo... Andreas Müller
06:34 PM bug #8956 (New): Close views and editors only after successful login
Currently open editors and views are closed even if a login as another user is not successful.
This is not necessary...
Andreas Müller
06:25 PM bug #7844 (Closed): LoginDialog freezes Taxeditor if no connection can be established
With the current timeouts and connection error handling this ticket seems to be fully fixed. Andreas Müller
06:03 PM feature request #6429 (Feedback): Reconstruct Admin Preferences
To me it looks like this was fixed long time ago. So we could close the ticket as worksforme remove target version. P... Andreas Müller
05:59 PM feature request #6327 (Duplicate): Providing the admin email for each server instance somehow
Andreas Kohlbecker wrote:
> Andreas Müller wrote:
> > Do we have an idea who the admin actually is?
> > Is it the ...
Andreas Müller
03:49 PM bug #8955 (New): After saving a taxon the taxon navigator scrolls the taxon to the bottom
NaK:
Hat man ein Taxon-Fenster geschlossen, verschiebt sich der Baum so, dass dieses Taxon ganz unten in der Ansic...
Andreas Müller
03:34 PM bug #8954 (Closed): Details and Supplemental Data View do not save the expansion state of section...
The regression described in #8260 occurs again for me. Details view and supplemental data view and maybe others do no... Andreas Müller
03:07 PM bug #8953 (New): Focus not correctly evaluated for details view when switching between names
NaK:
Problem mit dem Details-View. Sobald man ein Taxon geöffnet hat, und auf eines der Synonyme in der Liste klickt...
Andreas Müller

04/09/2020

02:02 PM task #8952 (New): Change data set to dataset
It has been decide to use dataset and not data set as label for data sets throughout the platform.
All labels and ...
Andreas Müller
02:00 PM bug #8951 (New): Do not show Open in ... menu in factual data view if no record is selected
Maybe this is also relevant for other views/editors
![](picture713-1.png)
Andreas Müller
01:09 PM task #8934 (Closed): Import new FoG status data
Andreas Müller
01:07 PM task #8934 (Resolved): Import new FoG status data
Applied in changeset commit:cdmlib-apps|44845558921aa07d8c89dfbeebf0ac7dab6c938d. Andreas Müller
01:07 PM Revision 44845558 (cdmlib-apps): fix #8934 final changes to FoG status import
Andreas Müller
01:05 PM feature request #8725: Add abbreviation to namedArea text field in distribution details view
Andreas Müller wrote:
> Andreas Müller wrote:
> > The preference should be moved from Factual Data to UI->Distribut...
Andreas Müller

04/08/2020

11:05 PM Revision 02741e89 (cdmlib-apps): ref #8934 changes to FoG status import
Andreas Müller
10:23 PM Revision 466b0811 (cdmlib-apps): ref #8886 lichenes source and destination updated
Andreas Müller
09:31 PM feature request #8950 (New): Allow creating new facts dataset and new fact in one step
Adding a fact to a taxon which does not yet have facts takes time as one first needs to create a factual dataset (des... Andreas Müller
07:12 PM bug #8949 (New): Open new fact in factual data view and set focus to main field in details view.
~~Currently when choosing creating a new fact via "new"->"feature" only the feature is shown and gets the focus in th... Andreas Müller
06:24 PM bug #8815: Clean up TaxonNodeDto and UuidAndTitleCache usage in TaxonNodeService/Dao
Andreas Kohlbecker wrote:
> Andreas Müller wrote:
> > Is this ticket fully fixed and for review?
>
> yes, I wrot...
Andreas Müller
06:11 PM bug #8815 (Closed): Clean up TaxonNodeDto and UuidAndTitleCache usage in TaxonNodeService/Dao
this seems to work, as there are no problems in the editor and the code looks fine as well. Katja Luther
06:02 PM bug #8815: Clean up TaxonNodeDto and UuidAndTitleCache usage in TaxonNodeService/Dao
Andreas Müller wrote:
> Is this ticket fully fixed and for review?
yes, I wrote this already in comment 7
Andreas Kohlbecker
05:00 PM bug #8815 (Resolved): Clean up TaxonNodeDto and UuidAndTitleCache usage in TaxonNodeService/Dao
Is this ticket fully fixed and for review? Andreas Müller
05:57 PM feature request #8895 (Closed): Specimen page: show specimen description as continuous text

* Source link like for taxon page descriptive data texts --> see #8948
* correct handling of multiple "exact value...
Andreas Kohlbecker
03:26 PM feature request #8895 (Feedback): Specimen page: show specimen description as continuous text
Open issues:
* Source link like for taxon page descriptive data texts
* correct handling of multiple "exact values"
Andreas Müller
11:50 AM feature request #8895 (Resolved): Specimen page: show specimen description as continuous text
das war ein Problem mit dem update des Codes durch Jenkins auf dem Test Server,
jetzt ist alles up to date
Andreas Kohlbecker
11:38 AM feature request #8895 (Feedback): Specimen page: show specimen description as continuous text
I tried to test but on http://test.e-taxonomy.eu/dataportal/preview/caryophyllales_spp/cdm_dataportal/occurrence/426e... Andreas Müller
05:55 PM feature request #8947: support multiple values of statistical value type ExactValue
Set to critical because the current implementation only shows parts of the data which may be misleading. Andreas Müller
02:59 PM feature request #8947 (New): support multiple values of statistical value type ExactValue
... kann eine Liste sein, also mehrere Exact Values, die dann wohl semikolon-separiert sein sollten, um Verwechslunge... Andreas Kohlbecker
05:48 PM feature request #8948 (New): Specimen page: specimen description link to description details page
the specimen description in the Specimen page should link to the description details page just like in the taxon page Andreas Kohlbecker
05:02 PM feature request #7981: Add configuration UI for matrix description aggregation
Generally this ticket is implemented I guess but there are a couple of open issues. I think we should split the ticket? Andreas Müller
04:29 PM Revision 4ca9a49e (cdm-server): Merge branch 'release/5.14.0' into develop
jenkins
04:29 PM Revision e35694af (cdm-server): jenkins merging release branch into master (strategy: theirs)
jenkins
04:28 PM Revision 341b0c9d (cdm-server): updating poms for branch'release/5.14.0' with non-snapshot versions
jenkins
04:13 PM Revision f73e861e (cdm-webapp): Merge branch 'release/5.14.0' into develop
jenkins
04:13 PM Revision 41eb055c (cdm-webapp): jenkins merging release branch into master (strategy: theirs)
jenkins
04:13 PM Revision 604af24e (cdm-webapp): updating poms for branch'release/5.14.0' with non-snapshot versions
jenkins
04:12 PM Revision 4829e191 (cdm-webapp): jenkins bumping cdmlib.version and cdm.vaadin.version to 5.14.0
jenkins
04:04 PM Revision 61508bfe (taxeditor): Merge branch 'release/5.14.0' into develop
jenkins
04:04 PM Revision 7421ffa8 (taxeditor): Merge branch 'release/5.14.0'
jenkins
03:56 PM Revision 042c419c (cdm-vaadin): Merge branch 'release/5.14.0' into develop
jenkins
03:56 PM Revision 8230f08a (cdm-vaadin): jenkins merging release branch into master (strategy: theirs)
jenkins
03:52 PM Revision 6310c27e (cdm-vaadin): updating poms for branch'release/5.14.0' with non-snapshot versions
jenkins
03:52 PM Revision 66c4ff1a (cdm-vaadin): jenkins bumping cdmlib.version to 5.14.0
jenkins
03:52 PM Revision 488b5188 (cdm-dataportal): Merge branch 'release/5.14.0' into develop
jenkins
03:52 PM Revision 9c0bc540 (cdm-dataportal): updating poms for branch'release/5.14.0' with non-snapshot ve...
jenkins
03:51 PM Revision 8fc89126 (cdm-dataportal): release-preparation: production level css
jenkins
03:50 PM Revision 21da8743 (cdmlib): Updating develop poms back to pre merge state
jenkins
03:50 PM Revision 6cd79d15 (cdmlib): Merge branch 'master' into develop
jenkins
03:50 PM Revision cb1497b9 (cdmlib): updating develop poms to master versions to avoid merge conflicts
jenkins
03:50 PM Revision 8abacaa7 (cdmlib): Merge branch 'release/5.14.0'
jenkins
03:29 PM Revision 3a5f7b8b (cdmlib): updating poms for branch'release/5.14.0' with non-snapshot versions
jenkins
03:07 PM Revision 494e8c00 (cdm-webapp): jenkins bumping cdmlib.version and cdm.vaadin.version to 5.14.0-S...
jenkins
03:07 PM Revision ec80aa66 (cdm-webapp): updating poms for 5.15.0-SNAPSHOT development
jenkins
03:07 PM Revision c830e730 (cdm-webapp): jenkins bumping cdmlib.version and cdm.vaadin.version to 5.15.0-S...
jenkins
03:06 PM Revision dcfa31c8 (taxeditor): Updated version in pom / project files to taxeditor version : 5.15...
jenkins
03:06 PM Revision 45e47c57 (taxeditor): Updated version in pom / project files to taxeditor version : 5.14...
jenkins
03:05 PM Revision d145b098 (cdm-server): updating poms for 5.15.0-SNAPSHOT development
jenkins
03:05 PM Revision f9d2c9a6 (cdm-dataportal): updating poms for 5.15.0-SNAPSHOT development
jenkins
03:05 PM Revision 6d273030 (cdm-vaadin): jenkins bumping cdmlib.version to 5.14.0-SNAPSHOT
jenkins
03:05 PM Revision 7e6ee285 (cdm-vaadin): updating poms for 5.15.0-SNAPSHOT development
jenkins
03:05 PM Revision 84174648 (cdm-vaadin): updating poms for 5.14.0 branch with snapshot versions
jenkins
03:04 PM Revision 095c2d01 (cdm-vaadin): jenkins bumping cdmlib.version to 5.15.0-SNAPSHOT
jenkins
03:02 PM Revision 4faecdd5 (cdmlib): updating poms for 5.14.0 branch with snapshot versions
jenkins
03:02 PM Revision 62a355af (cdmlib): updating poms for 5.15.0-SNAPSHOT development
jenkins
02:44 PM bug #8905 (Closed): Description Handling in ABCD import
This seems to work as expected now (though I still am not convinced that having the option to merge distributions if ... Andreas Müller
01:17 PM bug #8905: Description Handling in ABCD import
For testing import:
File -> Import -> Specimen -> Specimen Online -> enter "bgbm*Herbar" in text field for biocase p...
Katja Luther
11:32 AM bug #8905 (Feedback): Description Handling in ABCD import
Can you please add example data (webservice, example specimen) for reviewing? Andreas Müller
02:40 PM Revision b94b1aec (cdm-dataportal): ref #8945 improved support for statistical value type ExactValue
Andreas Kohlbecker
02:18 PM feature request #8725: Add abbreviation to namedArea text field in distribution details view
Revision 20fd2b76 says "move also admin preference" but I can't find this preference in the admin preferences. Andreas Müller
02:15 PM feature request #8725 (Feedback): Add abbreviation to namedArea text field in distribution detail...
Andreas Müller wrote:
> The preference should be moved from Factual Data to UI->Distribution Details View
Now it ...
Andreas Müller
12:27 PM feature request #8725 (Resolved): Add abbreviation to namedArea text field in distribution detail...
Applied in changeset commit:taxeditor|4bff1cd7132b34fa100aaff28408278dc6e585a5. Katja Luther
11:23 AM feature request #8725: Add abbreviation to namedArea text field in distribution details view
The label should be changed to Show id in vocabulary in **area** textfield.
"Areal" in German.
Andreas Müller
11:18 AM feature request #8725 (Feedback): Add abbreviation to namedArea text field in distribution detail...
The preference should be moved from Factual Data to UI->Distribution Details View Andreas Müller
02:12 PM feature request #8906 (Closed): Refactor DNA Sample details view
Works as expected Andreas Müller
12:57 PM feature request #8906 (Resolved): Refactor DNA Sample details view
please review Katja Luther
12:56 PM feature request #8906: Refactor DNA Sample details view
Andreas Müller wrote:
> Katja Luther wrote:
>
> > But we should create a new ticket to think about refactoring th...
Katja Luther
12:52 PM feature request #8906: Refactor DNA Sample details view
Andreas Müller wrote:
> As also commented in #8910 the show determinations only for field units preference does not ...
Katja Luther
12:52 PM feature request #8906 (Feedback): Refactor DNA Sample details view
Andreas Müller wrote:
> Determinations work now can we still add "Accession number" below "Barcode" as this is the d...
Katja Luther
12:50 PM feature request #8906 (Resolved): Refactor DNA Sample details view
Applied in changeset commit:taxeditor|c70ef402e57300c8b5f597afbb6a747ce78ccd3c. Katja Luther
11:30 AM feature request #8906: Refactor DNA Sample details view
As also commented in #8910 the show determinations only for field units preference does not yet work for the new DNA ... Andreas Müller
11:24 AM feature request #8906 (Feedback): Refactor DNA Sample details view
Determinations work now can we still add "Accession number" below "Barcode" as this is the default id field for impor... Andreas Müller
09:50 AM feature request #8906: Refactor DNA Sample details view
For reviewing: is there anything else that is new or changed in the DNA details view beside determinations? Andreas Müller
09:48 AM feature request #8906: Refactor DNA Sample details view
Katja Luther wrote:
> But we should create a new ticket to think about refactoring the details view of specimen in...
Andreas Müller
02:02 PM bug #8910 (Closed): Correct handling of preference for determinations
Andreas Müller wrote:
> This works now but only for the "new" determinations in DNA Details View it does not yet wor...
Katja Luther
11:29 AM bug #8910: Correct handling of preference for determinations
This works now but only for the "new" determinations in DNA Details View it does not yet work. Andreas Müller
11:28 AM bug #8910 (Feedback): Correct handling of preference for determinations
Katja Luther wrote:
> the problems are solved, they where caused by an empty combo box
Yes the above problem is s...
Andreas Müller
09:14 AM bug #8910 (Resolved): Correct handling of preference for determinations
the problems are solved, they where caused by an empty combo box Katja Luther
02:00 PM bug #8552 (Closed): Avoid DB call for matrix state DB preferences
Katja Luther
12:55 PM bug #8946 (New): Refactor DerivedUnit Details view
For all details views for the derived unit a derived unit facade is created, but depending on the selection providing... Katja Luther
12:53 PM feature request #8945 (Resolved): support statistical value type ExactValue (29736701-58c4-48b3-a...
this is solved now, even if in a preliminar way.
Andreas Kohlbecker
12:02 PM feature request #8945: support statistical value type ExactValue (29736701-58c4-48b3-a9d7-41c7414...
needs to be fixed for 5.13 as the error is visible in the portal even with specimen
descriptions as running text
Andreas Kohlbecker
11:02 AM feature request #8945 (Resolved): support statistical value type ExactValue (29736701-58c4-48b3-a...
Unsupported statistical value type: 29736701-58c4-48b3-a9d7-41c74140cac7
Should be quick to fix!!!!
e.g.: http:...
Andreas Kohlbecker
12:52 PM Revision a82a476a (cdm-dataportal): ref #8945 preliminar support for statistical value type Exact...
Andreas Kohlbecker
12:51 PM Revision 20fd2b76 (taxeditor): fix #8725: move also admin preference
Katja Luther
12:46 PM Revision c70ef402 (taxeditor): fix #8906: show determinations only if preference allow it
Katja Luther
12:27 PM Revision 4bff1cd7 (taxeditor): fix #8725: move preference
Katja Luther
11:08 AM Revision d2a769df (cdmlib): Revert "fix #8932 configuring swagger to support overloaded controlle...
This reverts commit c916a82aeea2d702daa12cd607f5bd5acc25a57f. Andreas Kohlbecker
11:06 AM bug #8932 (In Progress): Swagger does not distinguish overloaded controller endpoints
`enableUrlTemplating(true)` causes problems with swagger-ui.
we need to switch to a swagger ui version which suppo...
Andreas Kohlbecker
10:41 AM bug #8428 (Closed): NPE in ClassificationServiceImpl.loadTreeBranchToTaxon()
The NPE is no longer reproducible:
http://test.e-taxonomy.eu/cdmserver/euromed/portal/classification/314a68f9-8449...
Andreas Kohlbecker
10:36 AM feature request #980 (New): Links to relevant external website(s) in taxon pages
Andreas Kohlbecker
09:26 AM Revision cc10a813 (taxeditor): fix #8910: fix NPE in empty Combo box
Katja Luther
07:44 AM bug #8944: Handle org.springframework.security.authentication.DisabledException explicitely
I changed the subject to describe the task closer - hope this is in your sense Andreas. Andreas Kohlbecker
07:39 AM bug #8911 (Closed): LazyInitializationException (LIE) in portal/description/{uuid}
there are no other suspect spots. Andreas Kohlbecker

04/07/2020

11:48 PM feature request #8906: Refactor DNA Sample details view
See #8910#note-5 for a possible regression Andreas Müller
11:47 PM bug #8910 (Feedback): Correct handling of preference for determinations
I get an exception when choosing an ordinary specimen (derived unit) in specimen tree editor
~~~
last remote meth...
Andreas Müller
11:21 PM Revision b2ef3733 (taxeditor): cleanup
Andreas Müller
06:44 PM bug #8911: LazyInitializationException (LIE) in portal/description/{uuid}
Andreas Müller wrote:
> The above link already works on production. Has this issue been hotfixed already?
upps, n...
Andreas Müller
06:35 PM bug #8911 (Feedback): LazyInitializationException (LIE) in portal/description/{uuid}
The above link already works on production. Has this issue been hotfixed already?
Andreas Müller
06:41 PM Revision c181cf34 (cdmlib): cleanup
Andreas Müller
06:38 PM Revision a4215a6f (cdmlib): cleanup
Andreas Müller
06:32 PM bug #8913 (Closed): InInVoc not showing up anymore in TermEditor
Works as expected Andreas Müller
06:21 PM bug #8904 (Closed): Show "cloned" icon in factual data view
Works as expected Andreas Müller
06:15 PM bug #8917 (Closed): NPE when opening Acacia in Name bulk editor (from search)
works as expected Andreas Müller
06:06 PM Revision 0f7a4af3 (taxeditor): cleanup
Andreas Müller
06:01 PM feature request #8926 (Closed): Remove 'expired' flags in users details
correct Andreas Müller
05:58 PM bug #8944 (New): Handle org.springframework.security.authentication.DisabledException explicitely
If one tries to login as an disabled user an "unexpected error" is thrown.
But a disabled user should not be an un...
Andreas Müller
05:53 PM bug #8938 (Closed): ProposalProvider in NameRelationshiptype combo does not work as expected
Seems to work as expected Andreas Müller
05:50 PM bug #8943 (Closed): Term Preferences are not correctly handled in combo boxes
Seems to work Andreas Müller
03:43 PM bug #8943: Term Preferences are not correctly handled in combo boxes
now the handling of term preferences should work like expected.Please review. Katja Luther
03:39 PM bug #8943 (Resolved): Term Preferences are not correctly handled in combo boxes
Applied in changeset commit:taxeditor|33c10482605414dedddd643befbdff7559897b9e. Katja Luther
03:38 PM bug #8943 (Closed): Term Preferences are not correctly handled in combo boxes
mail WB:
Hallo,
ich hatte mich da schon vor einiger Zeit dran versucht, war aber wieder abgekommen: Wie kann man ...
Katja Luther
05:41 PM bug #8942 (Closed): Exception when try to get text of TextualTypeDesignation with language which ...
Correct Andreas Müller
05:35 PM bug #8940 (Closed): The export wizard does not remember last selected folder
Seems to work as expected Andreas Müller
05:29 PM bug #8939: Exception when opening Distribution Editor because of missing Preference
But handling of defaults (as implemented for most other preferences) is still not missing. This is mentioned in #8047... Andreas Müller
05:18 PM bug #8939 (Closed): Exception when opening Distribution Editor because of missing Preference
Seems to work as expected Andreas Müller
05:11 PM Revision 88d335c7 (taxeditor): cleanup
Andreas Müller
03:40 PM Revision 33c10482 (taxeditor): fix #8943: fix handling of term preferences in combo boxes and cod...
Katja Luther

04/06/2020

12:15 PM bug #8942: Exception when try to get text of TextualTypeDesignation with language which is not av...
please review. Katja Luther
12:14 PM bug #8942 (Resolved): Exception when try to get text of TextualTypeDesignation with language whic...
Applied in changeset commit:cdmlib|a2bd245128ad90fe14d5790ef26ef031176522a5. Katja Luther
12:09 PM bug #8942 (Closed): Exception when try to get text of TextualTypeDesignation with language which ...

~~~
java.lang.NullPointerException
at eu.etaxonomy.cdm.model.name.TextualTypeDesignation.getText(TextualTypeDe...
Katja Luther
12:14 PM Revision a2bd2451 (cdmlib): fix #8942: fix NPE for not existing language
Katja Luther
11:30 AM bug #8941: Exception when opening taxon from taxonnavigator by double click
this exception is caused in the eclipse method showPart, maybe the part is not available. Katja Luther
11:28 AM bug #8941 (New): Exception when opening taxon from taxonnavigator by double click

mail WB:
Hallo,
parallel läuft ein Export, vielleicht zu viel auf einmal?
Passieren tut anschließend nichts.
H...
Katja Luther
10:50 AM bug #8939: Exception when opening Distribution Editor because of missing Preference
please review Katja Luther
10:13 AM bug #8939 (Resolved): Exception when opening Distribution Editor because of missing Preference
Applied in changeset commit:taxeditor|c6df97c52c7252b0fdd708029155ddfca164ffaf. Katja Luther
09:49 AM bug #8939 (In Progress): Exception when opening Distribution Editor because of missing Preference
Katja Luther
09:48 AM bug #8939 (Closed): Exception when opening Distribution Editor because of missing Preference
Dear Andreas,
I would like to report an error, when I try "Opening in..." "Distribution editor", I get the message...
Katja Luther
10:49 AM bug #8940: The export wizard does not remember last selected folder
please review Katja Luther
10:48 AM bug #8940 (Resolved): The export wizard does not remember last selected folder
Applied in changeset commit:taxeditor|7e48c2ec9b8eb389cc9659c4f62621c9b078dd68. Katja Luther
10:47 AM bug #8940 (Closed): The export wizard does not remember last selected folder
When opening the export wizard the last selected export folder was shown in the text field, this is not the case anym... Katja Luther
10:49 AM Revision 7e48c2ec (taxeditor): fix #8940: the last selected folder of export wizard correctly han...
Katja Luther
10:25 AM Revision 2f693358 (taxeditor): code cleaning
Katja Luther
10:14 AM Revision c6df97c5 (taxeditor): fix #8939: fix getIntValue for preference with no db and no local ...
Katja Luther
10:06 AM feature request #8931: Taxeditor supports https
There are no problems connecting the production server api.cybertaxonomy.org:443
So the problem above seems rather...
Andreas Kohlbecker
09:23 AM feature request #8931: Taxeditor supports https
Atlassian provides detaild information on this problem at https://confluence.atlassian.com/kb/unable-to-connect-to-ss... Andreas Kohlbecker
08:29 AM feature request #8931: Taxeditor supports https
Connecting the test server (test.e-taxonomy.eu) via https fails with:
~~~
....
Caused by: sun.security.validator...
Andreas Kohlbecker
09:38 AM bug #8938: ProposalProvider in NameRelationshiptype combo does not work as expected
please review Katja Luther
09:27 AM bug #8938 (Resolved): ProposalProvider in NameRelationshiptype combo does not work as expected
Applied in changeset commit:taxeditor|e2561ea7d4c417afe58d8bebf60c28146abb3f1c. Katja Luther
09:13 AM bug #8938 (Closed): ProposalProvider in NameRelationshiptype combo does not work as expected
The ProposalProvider does not set the selection for the combo element, therefore the finish button is not enabled. Katja Luther
09:28 AM Revision e2561ea7 (taxeditor): fix #8938: fix proposal provider in namerelationshiptype combo
Katja Luther
08:43 AM feature request #8926 (Resolved): Remove 'expired' flags in users details
Katja Luther
08:25 AM Revision 70fa5baf (taxeditor): ref #8931 using https for port 443
Andreas Kohlbecker
 

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