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From 03/24/2020 to 04/22/2020

04/22/2020

07:36 PM bug #8976 (New): error in tagged_text_extract_reference_and_detail()
see http://test.e-taxonomy.eu/dataportal/preview/caryophyllales_spp/cdm_dataportal/polytomousKey/f36b96a1-925b-463d-b... Andreas Kohlbecker
07:07 PM feature request #8975 (Closed): Name Status filtered in UI
In PhycoBank Vaadin, all available status can be selected.
For PhycoBank just a few nomenclatural status are relevan...
Wolf-Henning Kusber
06:21 PM feature request #8657 (Closed): Order description element in portal according to CharacterTree
I move the indentation issue to #8798 as it fits better there. And close this ticket. Andreas Müller
06:12 PM feature request #8657 (Feedback): Order description element in portal according to CharacterTree
~~Andreas K., can you please check if the existing identation is caused by (wrong) handling of tree hierarchy or by a... Andreas Müller
05:49 PM feature request #8657: Order description element in portal according to CharacterTree
Currently only a flat list is created. I opened a new ticket to discuss if also the hierarchical structure should be ... Andreas Müller
05:41 PM feature request #8657: Order description element in portal according to CharacterTree
Maybe this ticket also covered the "freetext" description ordering like on http://caryophyllales.org/cactaceae/cdm_da... Andreas Müller
05:39 PM feature request #8657: Order description element in portal according to CharacterTree
Example URL is: http://caryophyllales.org/cactaceae/cdm_dataportal/description/f4fc4b11-90c7-4a02-b236-2d58f5891e6e Andreas Müller
06:19 PM feature request #8798: description page: Show character hierarchy
Andreas K., can you please check if the existing identation is caused by (wrong) handling of tree hierarchy or by a w... Andreas Müller
06:19 PM feature request #8798: description page: Show character hierarchy
This seems to be closely related to #8657 Maybe it is even a duplicate. Andreas Müller
06:13 PM bug #8766 (Closed): Aggregated Descriptions: show Sample size as [$SAMPLE_SIZE]
This seems to be fully and correctly implemented. Norbert, please reopen if you think there are open issues. Andreas Müller
06:01 PM task #8974 (New): [DISCUSS] Should freetext descriptions reflect the feature tree hierarchy and/or empty feature nodes?
Same as #8973 but for the "freetext" descriptions like in http://caryophyllales.org/cactaceae/cdm_dataportal/taxon/b1... Andreas Müller
05:47 PM task #8973 (New): [DISCUSS] Should description tables reflect the feature tree hierarchy and/or empty feature nodes?
Currently description tables are flat list which are ordered according to the related feature tree but do not show th... Andreas Müller
05:40 PM feature request #6113 (In Progress): webservice to expose FieldUnits related to a Taxon or TaxonName as KML and/or GML
Andreas Kohlbecker
05:29 PM feature request #8855 (Resolved): Show error radius in EDIT portal
solved even if not all kml web services are available. Therefore the display of error radius is not possible for all ... Andreas Kohlbecker
05:17 PM feature request #8972 (Closed): integrate kml layers into map viewer
Andreas Kohlbecker
05:09 PM feature request #8972 (Closed): integrate kml layers into map viewer
use the output from #6113 in the data portal
* extend openlayers_map.js and map.inc to support kml layers provided...
Andreas Kohlbecker
05:15 PM feature request #4488 (Resolved): Specimen data points in map should show FieldUnit information
once this is available in the test portal we need to gather feedback from users (corvids, campanula, algaterra, phyco... Andreas Kohlbecker
05:12 PM Revision c1fc969a (cdm-dataportal): ref #8972, ref #8855, ref #4488 using kml response to show specimen points in maps with data in balloon popups with links
Andreas Kohlbecker
05:06 PM Revision 5f5cfe6a (cdmlib): ref #6113 producing more complete kml for DerivedUnits & general controller for HTTP OPTIONS requests
Andreas Kohlbecker
05:06 PM Revision e8b0cf59 (cdmlib): developer doc for LifeCycle management
Andreas Kohlbecker
05:06 PM Revision c795a3a1 (cdmlib): ref #6113 dependencies for gis and kml functionality
Andreas Kohlbecker
12:24 PM bug #8970: Moving a taxon to another position often closes the parent nodes
WGB:
ja, mit „nach oben in der Hierarchie“ meinte ich zum Elter, nach unten in ein anderes Kind (wie im Beispiel).
...
Andreas Müller
11:56 AM bug #8970 (Worksforme): Moving a taxon to another position often closes the parent nodes
When moving a taxon to another parent taxon node in the taxon navigator the new and the old taxon nodes are often clo... Andreas Müller
12:23 PM bug #8971 (New): Long running tasks in taxon navigator should disable the navigator
WGB:
Ein [...] Problem ist, dass während dieses Prozesses (der manchmal etwas dauern kann) ein Doppelklick auf einen...
Andreas Müller
12:04 PM feature request #8777: Make visiblity of CDM Source configurable
CDM Source has primarily been introduced by additivity but it has negative impacts on other DBs. Therefore I add the ... Andreas Müller
11:58 AM bug #8832: Choosing the area for distribution in details view clears the selected status
So I guess we should move it back to 5.13 Andreas Müller
11:10 AM bug #8832 (Resolved): Choosing the area for distribution in details view clears the selected status
this was already solved with Revision 5a9bfdf8. Katja Luther
09:28 AM bug #8969: Multiple deduplications are not executed
AM:
Ich habe es selber gerade getestet und es ist reproduzierbar. Vermutlich wird die Meldung vor der zweiten Dedu...
Andreas Müller
09:24 AM bug #8969 (Closed): Multiple deduplications are not executed
If you deduplicate (e.g. in reference bulk editor) a group of references and than without saving try to deduplicate a... Andreas Müller

04/21/2020

02:41 PM feature request #8968 (Closed): filter Bulk editor for created by
Taxonomic Editor: Bulk editor
Feature request for: filter for "created by"
This would allow to find systematic ...
Wolf-Henning Kusber
02:38 PM feature request #8595 (Closed): Create description detail page
All the rest seems to be fixed or even improved in the meanwhile. So I close this ticket. Andreas Müller
02:37 PM feature request #8595: Create description detail page
Geklonte SpecimenDescription brauchen Datum und Dataset im Titel => this is not yet fully implemented. Created new ti... Andreas Müller
02:36 PM feature request #8967 (New): Improve label for cloned descriptions
... and maybe also other descriptions.
From #8595: "Geklonte SpecimenDescription brauchen Datum und Dataset im Tit...
Andreas Müller
02:29 PM bug #8779 (Closed): Description page: use render_taxon_or_name() for creating the page and description title and taxon links
Looks like this is fully fixed. Norbert, please reopen if there is an open issue with naming of taxa and names on the... Andreas Müller
02:27 PM bug #8739 (Closed): remaining issues for description detail page
This all seems to be implemented or moved to other tickets. Norbert, please reopen if you think some issues are not f... Andreas Müller
02:13 PM bug #8966 (New): Name page: show types of related names as running text with the related name
Example names:
* Navicula capitata Ehrenb (https://www.phycobank.org/cdm_dataportal/name/6b6539cd-9cb8-4748-9130-a...
Andreas Kohlbecker
12:51 PM feature request #8758 (Closed): Aggregated Descriptions: order states by frequency
I checked for Rhipsalis (http://caryophyllales.org/cactaceae/cdm_dataportal/taxon/b15ec01d-b909-4143-b197-e752b6f34d5... Andreas Müller
12:44 PM feature request #8803 (Closed): Add "per mm²" to measurement units
I checked on an old DB like globis and the new value is available there, too. So I close this ticket. Andreas Müller
11:43 AM feature request #8208: Allow selecting property modifiers when creating a character
I suggest to implement this only when we realize that we really need it. Andreas Müller
11:40 AM feature request #8003: [DISUCSS] Implement "Export" on sub tree of FeatureTrees
Probably we will not manage to implement this in 5.15. We also need to discuss who should work on it and how importan... Andreas Müller
11:38 AM feature request #8453: Improve performance of DescriptiveDataSet
This is probably a major task which can not be handled in 5.15. We also need to discuss who should work on it. Andreas Müller
11:35 AM feature request #7675: Make columns with default values togglable
Can you please check how work intensiv this is? Andreas Müller
11:34 AM feature request #7580 (In Progress): User wishes: CharacterMatrix
The status of this ticket to me is unclear. There are some commits so I guess it is at least in progress.
I don't k...
Andreas Müller
11:21 AM feature request #8529: [DISCUSS]Display of aggregated descriptions
This ticket is very vague and maybe it is completely handleded in other tickets already.
The first part of the des...
Andreas Müller
11:15 AM bug #8903: Remember expansion state in factual data view
Moving to additivity milestone. But in general remembering of expansion state currently does not work correctly in th... Andreas Müller
11:13 AM feature request #8775: Improve (rapid) data entry into characater matrix for categorical data
Moving to additivity milestone Andreas Müller
11:12 AM feature request #8902: Add "open in" menu to row menu in matrix editor
moving to additivity milestone Andreas Müller
11:11 AM feature request #7774: Show description source for description elements
Moving to additivity milestone Andreas Müller
11:10 AM feature request #8742: Allow deleting vocabularies
5.15 is considered to be an additivity milestone. Therefore I move it to this milestone. Andreas Müller
10:47 AM bug #8510: Non unique object exception when creating FeatureStates
We should check if this is still an open issue and/or if it is related to any other of the term tree editing issues Andreas Müller
10:36 AM bug #8959: Moving a synonym to the homotypical group of the accepted taxon opens the context menu of the accepted taxon
Andreas Müller wrote:
> I did not review yet (editor is still building) but forgot to mention in the description tha...
Katja Luther
10:20 AM bug #8959: Moving a synonym to the homotypical group of the accepted taxon opens the context menu of the accepted taxon
I did not review yet (editor is still building) but forgot to mention in the description that also removing a synonym... Andreas Müller
09:57 AM bug #8959: Moving a synonym to the homotypical group of the accepted taxon opens the context menu of the accepted taxon
Now the focus is set explicitly to the moved synonym, so the context menu should be correct. please review Katja Luther
09:44 AM bug #8959 (Resolved): Moving a synonym to the homotypical group of the accepted taxon opens the context menu of the accepted taxon
Applied in changeset commit:taxeditor|764151afe45bda26527cd591324959cae397eb70. Katja Luther
10:16 AM task #8957 (Closed): Rename "unexpected error" to "unhandled error"
this seems to be correct. Katja Luther
10:08 AM bug #8961 (Resolved): Using the selection dialogue for nomenclatural references removes the recently used list
please review
Katja Luther
10:05 AM Revision 6a56588d (taxeditor): fix #8962: check for disposed section
Katja Luther
10:05 AM bug #8962: Handle widget is disposed after closing Supplemental Data View
please review Katja Luther
10:04 AM bug #8962 (Resolved): Handle widget is disposed after closing Supplemental Data View
Applied in changeset commit:taxeditor|6a56588d99aa57e6da57bad3def7b9e376cc4466. Katja Luther
09:45 AM Revision 764151af (taxeditor): fix #8959: set focus to synonym after moving synonym to other homotypic group
Katja Luther
09:09 AM Revision 3580c856 (taxeditor): use copy icon for clone button in name details view
Katja Luther

04/20/2020

07:14 PM bug #8965 (New): Separator missing for aggregated descriptions of higher character tree nodes
In the aggregated descriptions freetext separators are missing in front of the text belonging to character nodes of h... Andreas Müller
06:33 PM bug #8857: NonUniqueObjectException when creating new taxon
There is a very similar case which has a secundum reference and a nomenclatural reference in common (not only authors... Andreas Müller
06:32 PM Revision c2724256 (taxeditor): fix #8034: calling nomenclatural ref selection dialog should not delete last selected reference list
Katja Luther
06:30 PM Revision 2d440e1c (cdmlib): ref #8857 NonUniqueObjectException test for new taxon with shared reference
Andreas Müller
06:13 PM bug #8963: Selection dialogues should be modal
Don't know why the shell style was set to SWT.DIALOG_TRIM. This is fixed now. Katja Luther
06:10 PM bug #8963 (Resolved): Selection dialogues should be modal
Applied in changeset commit:taxeditor|5893c96f9e864a5206112771215a6f699ffa7977. Katja Luther
04:18 PM bug #8963: Selection dialogues should be modal
NaK:
ich mache folgendes
- sec ref. für das akzeptierte Taxon ändern. Das Details view zeigt die neue sec. ref. ric...
Andreas Müller
04:15 PM bug #8963 (Closed): Selection dialogues should be modal
Currently it is possible to edit data in other parts of the TaxEditor if a selection dialogue is opened. This may lea... Andreas Müller
06:10 PM Revision 5893c96f (taxeditor): fix #8963: selection dialogs should be modal
Katja Luther
05:28 PM bug #8964: Improve label for homonym relationships
~~~ SQL
UPDATE DefinedTermBase
SET titleCache = 'is later homonym of'
WHERE uuid = '80f06f65-58e0-4209-b811-cb4...
Andreas Müller
05:22 PM bug #8964 (In Progress): Improve label for homonym relationships
Implemented in csv files.
Still need to implement update script for 4 Representations and 2 DefinedTermBase.titleC...
Andreas Müller
05:19 PM bug #8964 (Closed): Improve label for homonym relationships
WGB:
Name relationships:
is later/earlier homonym “for” => “of”
===
Needed for "is later/earlier homonym for"...
Andreas Müller
05:20 PM Revision 469fa283 (cdmlib): ref #8964 later homonym for => of (changed in csv files)
Andreas Müller
03:06 PM bug #8962 (Closed): Handle widget is disposed after closing Supplemental Data View
WGB:
nach Schließen des Supplemental Data views.
Vorher: Synonym Wormia von Ancistrocladus Fokus auf Name gesetzt....
Andreas Müller
02:56 PM bug #8961 (Closed): Using the selection dialogue for nomenclatural references removes the recently used list
Selecting a nomenclatural reference for a TaxonName seems to delete the list of recently used references.
WGB:
We...
Andreas Müller
12:25 PM feature request #8960 (New): Use explicit icon for accepted taxa being basionyms
Accepted taxa can now be flagged as basionyms in their homotypical group. But there is no icon yet that shows that th... Andreas Müller
12:16 PM bug #8959 (Closed): Moving a synonym to the homotypical group of the accepted taxon opens the context menu of the accepted taxon
To reproduce:
* open a taxon which has a heterotypic synonym
* move this synonym to the homotypic group of the ac...
Andreas Müller
11:04 AM bug #4299: Show error when permission is denied ...
I think I chose this title because my concern was that permission errors are not shown in general (or at least at mul... Andreas Müller
10:21 AM bug #4299: Show error when permission is denied ...
I think we should change the subject of this issue to better reflect the details of this task.
Suggestion: *Adapt ...
Andreas Kohlbecker
10:46 AM feature request #6335: Providing the admin email for each server installation
I am changing the subject to avoid confusion of server installation with cdm instance Andreas Kohlbecker
10:22 AM feature request #8958: Add publication year, inReference (journal), and URI to reference bulk editor
WGB:
ich verbringe ja einen beträchtlichen Teil meiner Zeit mit dem Aufräumen von nomenklatorischen und bibliographi...
Andreas Müller
10:22 AM feature request #8958 (Closed): Add publication year, inReference (journal), and URI to reference bulk editor
Andreas Müller
10:00 AM feature request #7432: Show default login only if the account has not been changed
Andreas Müller wrote:
> Another solution could be to show the default password only if the host is localhost or if t...
Andreas Kohlbecker

04/17/2020

11:50 PM Revision 39c62a4a (cdmlib): cleanup
Andreas Müller
11:50 PM Revision 4e0742ba (cdmlib): ref #8857 adapt test for non-unique object exception
Andreas Müller
08:12 PM bug #8857 (In Progress): NonUniqueObjectException when creating new taxon
I created a test for the issue: TaxonNodeServiceImplTest.testSaveNewTaxonNode()
The problem seems to be a principa...
Andreas Müller
12:18 PM bug #8857: NonUniqueObjectException when creating new taxon
The error occurred again:
![](picture395-1.png)
The screenshot shows that the new taxon is using an author whic...
Andreas Müller
08:03 PM Revision e2ac6eb9 (cdmlib): cleanup
Andreas Müller
08:03 PM Revision a99c387f (cdmlib): ref #8857 test for non-unique object exception
Andreas Müller
07:59 PM feature request #8238 (Feedback): Allow interoperability between term trees
should we split this ticket? Andreas Müller
07:58 PM feature request #7981 (Feedback): Add configuration UI for matrix description aggregation
Andreas Müller
05:42 PM Revision 24e1f8d3 (cdmlib): cleanup
Andreas Müller
05:39 PM Revision 53bbff6f (cdmlib): cleanup RedmineRegistrationMessageServiceTest.xml
Andreas Müller
12:45 PM Revision 0fe66ef7 (cdmlib): cleanup
Andreas Müller
12:06 PM Revision 3720ed7b (taxeditor): cleanup
Andreas Müller
12:06 PM Revision 1d255789 (taxeditor): fix #8957 Replace "Unexpected error" by "Error" in title
Andreas Müller
11:49 AM task #8957: Rename "unexpected error" to "unhandled error"
I replaced now "This is an unexpected error" by "An error occurred". Please review. Andreas Müller
11:48 AM task #8957 (Resolved): Rename "unexpected error" to "unhandled error"
Applied in changeset commit:taxeditor|7b67db23d063fe89224e44874055487cdaff85b7. Andreas Müller
11:35 AM task #8957: Rename "unexpected error" to "unhandled error"
WGB:
ja, von mir aus – aber eigentlich sind das Aussagen, die nicht das USER interface sondern das developer interfa...
Andreas Müller
11:08 AM task #8957: Rename "unexpected error" to "unhandled error"
WGB:
„Unexpected Error“ und „This is an unexpected Error“ entbehrt nicht einer gewissen Komik, ich nehme an, die ist...
Andreas Müller
11:07 AM task #8957 (Closed): Rename "unexpected error" to "unhandled error"
Andreas Müller
11:48 AM Revision 7b67db23 (taxeditor): fix #8957 Replace "This is an unexpected error" by "An error occurred"
Andreas Müller
11:44 AM Revision fb74fafe (taxeditor): cleanup
Andreas Müller
11:01 AM feature request #7432: Show default login only if the account has not been changed
WGB:
Und im Login-Dialog stolpere ich jedes mal über die Angabe des Defaults (admin, ...) – die ist doch klar unsi...
Andreas Müller
11:00 AM feature request #7432: Show default login only if the account has not been changed
Another solution could be to show the default password only if the host is localhost or if the instance is "localhost... Andreas Müller
12:39 AM task #2342: Open issues for DwC-A export
Maybe still not the correct milestone but still better than the old one. Andreas Müller
12:11 AM feature request #4298 (Feedback): refresh views after changing rights
Is this still an open issue?
If yes, please let discuss which milestone to put it to, as the old milestone is closed.
Andreas Müller
12:07 AM feature request #3095 (Feedback): protect taxa and nodes
Please check what are the issues that are still open. Maybe split ticket afterwards into open and closed issues. Andreas Müller
12:05 AM feature request #3097 (Feedback): disable editors if a user has insufficient grants for a taxon or taxon node.
I am not sure if I understand what is meant here with "enabled".
Currently it seems possible to open a taxon but not...
Andreas Müller

04/16/2020

11:42 PM Revision 0ebc7378 (taxeditor): cleanup
Andreas Müller
11:41 PM Revision 142a6b70 (taxeditor): ref #4306 remove camel case for GrantedAuthority labels
Andreas Müller
11:35 PM Revision 84527493 (taxeditor): cleanup
Andreas Müller
06:45 PM bug #4300 (Feedback): Authority form does not work under Windows
To me it looks like this ticket can be closed as worksforme even if the authority form is still not working very well... Andreas Müller
06:40 PM bug #4299: Show error when permission is denied ...
Also entering the New->Taxon dialog should not be possible as the dialog is fully disabled in this case anyway (but o... Andreas Müller
06:37 PM bug #4299: Show error when permission is denied ...
I move this to current milestone as we have more and more DBs with limited rights and therefore this issue becomes mo... Andreas Müller
06:34 PM bug #8956 (New): Close views and editors only after successful login
Currently open editors and views are closed even if a login as another user is not successful.
This is not necessary...
Andreas Müller
06:25 PM bug #7844 (Closed): LoginDialog freezes Taxeditor if no connection can be established
With the current timeouts and connection error handling this ticket seems to be fully fixed. Andreas Müller
06:03 PM feature request #6429 (Feedback): Reconstruct Admin Preferences
To me it looks like this was fixed long time ago. So we could close the ticket as worksforme remove target version. P... Andreas Müller
05:59 PM feature request #6327 (Duplicate): Providing the admin email for each server instance somehow
Andreas Kohlbecker wrote:
> Andreas Müller wrote:
> > Do we have an idea who the admin actually is?
> > Is it the ...
Andreas Müller
03:49 PM bug #8955 (New): After saving a taxon the taxon navigator scrolls the taxon to the bottom
NaK:
Hat man ein Taxon-Fenster geschlossen, verschiebt sich der Baum so, dass dieses Taxon ganz unten in der Ansic...
Andreas Müller
03:34 PM bug #8954 (Closed): Details and Supplemental Data View do not save the expansion state of sections again
The regression described in #8260 occurs again for me. Details view and supplemental data view and maybe others do no... Andreas Müller
03:07 PM bug #8953 (In Progress): Focus not correctly evaluated for details view when switching between names
NaK:
Problem mit dem Details-View. Sobald man ein Taxon geöffnet hat, und auf eines der Synonyme in der Liste klickt...
Andreas Müller

04/09/2020

02:02 PM task #8952 (New): Change data set to dataset
It has been decide to use dataset and not data set as label for data sets throughout the platform.
All labels and ...
Andreas Müller
02:00 PM bug #8951 (New): Do not show Open in ... menu in factual data view if no record is selected
Maybe this is also relevant for other views/editors
![](picture713-1.png)
Andreas Müller
01:09 PM task #8934 (Closed): Import new FoG status data
Andreas Müller
01:07 PM task #8934 (Resolved): Import new FoG status data
Applied in changeset commit:cdmlib-apps|44845558921aa07d8c89dfbeebf0ac7dab6c938d. Andreas Müller
01:07 PM Revision 44845558 (cdmlib-apps): fix #8934 final changes to FoG status import
Andreas Müller
01:05 PM feature request #8725: Add abbreviation to namedArea text field in distribution details view
Andreas Müller wrote:
> Andreas Müller wrote:
> > The preference should be moved from Factual Data to UI->Distribut...
Andreas Müller

04/08/2020

11:05 PM Revision 02741e89 (cdmlib-apps): ref #8934 changes to FoG status import
Andreas Müller
10:23 PM Revision 466b0811 (cdmlib-apps): ref #8886 lichenes source and destination updated
Andreas Müller
09:31 PM feature request #8950 (New): Allow creating new facts dataset and new fact in one step
Adding a fact to a taxon which does not yet have facts takes time as one first needs to create a factual dataset (des... Andreas Müller
07:12 PM bug #8949 (New): Open new fact in factual data view and set focus to main field in details view.
~~Currently when choosing creating a new fact via "new"->"feature" only the feature is shown and gets the focus in th... Andreas Müller
06:24 PM bug #8815: Clean up TaxonNodeDto and UuidAndTitleCache usage in TaxonNodeService/Dao
Andreas Kohlbecker wrote:
> Andreas Müller wrote:
> > Is this ticket fully fixed and for review?
>
> yes, I wrot...
Andreas Müller
06:11 PM bug #8815 (Closed): Clean up TaxonNodeDto and UuidAndTitleCache usage in TaxonNodeService/Dao
this seems to work, as there are no problems in the editor and the code looks fine as well. Katja Luther
06:02 PM bug #8815: Clean up TaxonNodeDto and UuidAndTitleCache usage in TaxonNodeService/Dao
Andreas Müller wrote:
> Is this ticket fully fixed and for review?
yes, I wrote this already in comment 7
Andreas Kohlbecker
05:00 PM bug #8815 (Resolved): Clean up TaxonNodeDto and UuidAndTitleCache usage in TaxonNodeService/Dao
Is this ticket fully fixed and for review? Andreas Müller
05:57 PM feature request #8895 (Closed): Specimen page: show specimen description as continuous text

* Source link like for taxon page descriptive data texts --> see #8948
* correct handling of multiple "exact value...
Andreas Kohlbecker
03:26 PM feature request #8895 (Feedback): Specimen page: show specimen description as continuous text
Open issues:
* Source link like for taxon page descriptive data texts
* correct handling of multiple "exact values"
Andreas Müller
11:50 AM feature request #8895 (Resolved): Specimen page: show specimen description as continuous text
das war ein Problem mit dem update des Codes durch Jenkins auf dem Test Server,
jetzt ist alles up to date
Andreas Kohlbecker
11:38 AM feature request #8895 (Feedback): Specimen page: show specimen description as continuous text
I tried to test but on http://test.e-taxonomy.eu/dataportal/preview/caryophyllales_spp/cdm_dataportal/occurrence/426e... Andreas Müller
05:55 PM feature request #8947: support multiple values of statistical value type ExactValue
Set to critical because the current implementation only shows parts of the data which may be misleading. Andreas Müller
02:59 PM feature request #8947 (New): support multiple values of statistical value type ExactValue
... kann eine Liste sein, also mehrere Exact Values, die dann wohl semikolon-separiert sein sollten, um Verwechslunge... Andreas Kohlbecker
05:48 PM feature request #8948 (New): Specimen page: specimen description link to description details page
the specimen description in the Specimen page should link to the description details page just like in the taxon page Andreas Kohlbecker
05:02 PM feature request #7981: Add configuration UI for matrix description aggregation
Generally this ticket is implemented I guess but there are a couple of open issues. I think we should split the ticket? Andreas Müller
04:29 PM Revision 4ca9a49e (cdm-server): Merge branch 'release/5.14.0' into develop
jenkins
04:29 PM Revision e35694af (cdm-server): jenkins merging release branch into master (strategy: theirs)
jenkins
04:28 PM Revision 341b0c9d (cdm-server): updating poms for branch'release/5.14.0' with non-snapshot versions
jenkins
04:13 PM Revision f73e861e (cdm-webapp): Merge branch 'release/5.14.0' into develop
jenkins
04:13 PM Revision 41eb055c (cdm-webapp): jenkins merging release branch into master (strategy: theirs)
jenkins
04:13 PM Revision 604af24e (cdm-webapp): updating poms for branch'release/5.14.0' with non-snapshot versions
jenkins
04:12 PM Revision 4829e191 (cdm-webapp): jenkins bumping cdmlib.version and cdm.vaadin.version to 5.14.0
jenkins
04:04 PM Revision 61508bfe (taxeditor): Merge branch 'release/5.14.0' into develop
jenkins
04:04 PM Revision 7421ffa8 (taxeditor): Merge branch 'release/5.14.0'
jenkins
03:56 PM Revision 042c419c (cdm-vaadin): Merge branch 'release/5.14.0' into develop
jenkins
03:56 PM Revision 8230f08a (cdm-vaadin): jenkins merging release branch into master (strategy: theirs)
jenkins
03:52 PM Revision 6310c27e (cdm-vaadin): updating poms for branch'release/5.14.0' with non-snapshot versions
jenkins
03:52 PM Revision 66c4ff1a (cdm-vaadin): jenkins bumping cdmlib.version to 5.14.0
jenkins
03:52 PM Revision 488b5188 (cdm-dataportal): Merge branch 'release/5.14.0' into develop
jenkins
03:52 PM Revision 9c0bc540 (cdm-dataportal): updating poms for branch'release/5.14.0' with non-snapshot versions
jenkins
03:51 PM Revision 8fc89126 (cdm-dataportal): release-preparation: production level css
jenkins
03:50 PM Revision 21da8743 (cdmlib): Updating develop poms back to pre merge state
jenkins
03:50 PM Revision 6cd79d15 (cdmlib): Merge branch 'master' into develop
jenkins
03:50 PM Revision cb1497b9 (cdmlib): updating develop poms to master versions to avoid merge conflicts
jenkins
03:50 PM Revision 8abacaa7 (cdmlib): Merge branch 'release/5.14.0'
jenkins
03:29 PM Revision 3a5f7b8b (cdmlib): updating poms for branch'release/5.14.0' with non-snapshot versions
jenkins
03:07 PM Revision 494e8c00 (cdm-webapp): jenkins bumping cdmlib.version and cdm.vaadin.version to 5.14.0-SNAPSHOT
jenkins
03:07 PM Revision ec80aa66 (cdm-webapp): updating poms for 5.15.0-SNAPSHOT development
jenkins
03:07 PM Revision c830e730 (cdm-webapp): jenkins bumping cdmlib.version and cdm.vaadin.version to 5.15.0-SNAPSHOT
jenkins
03:06 PM Revision dcfa31c8 (taxeditor): Updated version in pom / project files to taxeditor version : 5.15.0-SNAPSHOT and cdmlib version : 5.15.0-SNAPSHOT
jenkins
03:06 PM Revision 45e47c57 (taxeditor): Updated version in pom / project files to taxeditor version : 5.14.0 and cdmlib version : 5.14.0
jenkins
03:05 PM Revision d145b098 (cdm-server): updating poms for 5.15.0-SNAPSHOT development
jenkins
03:05 PM Revision f9d2c9a6 (cdm-dataportal): updating poms for 5.15.0-SNAPSHOT development
jenkins
03:05 PM Revision 6d273030 (cdm-vaadin): jenkins bumping cdmlib.version to 5.14.0-SNAPSHOT
jenkins
03:05 PM Revision 7e6ee285 (cdm-vaadin): updating poms for 5.15.0-SNAPSHOT development
jenkins
03:05 PM Revision 84174648 (cdm-vaadin): updating poms for 5.14.0 branch with snapshot versions
jenkins
03:04 PM Revision 095c2d01 (cdm-vaadin): jenkins bumping cdmlib.version to 5.15.0-SNAPSHOT
jenkins
03:02 PM Revision 62a355af (cdmlib): updating poms for 5.15.0-SNAPSHOT development
jenkins
03:02 PM Revision 4faecdd5 (cdmlib): updating poms for 5.14.0 branch with snapshot versions
jenkins
02:44 PM bug #8905 (Closed): Description Handling in ABCD import
This seems to work as expected now (though I still am not convinced that having the option to merge distributions if ... Andreas Müller
01:17 PM bug #8905: Description Handling in ABCD import
For testing import:
File -> Import -> Specimen -> Specimen Online -> enter "bgbm*Herbar" in text field for biocase p...
Katja Luther
11:32 AM bug #8905 (Feedback): Description Handling in ABCD import
Can you please add example data (webservice, example specimen) for reviewing? Andreas Müller
02:40 PM Revision b94b1aec (cdm-dataportal): ref #8945 improved support for statistical value type ExactValue
Andreas Kohlbecker
02:18 PM feature request #8725: Add abbreviation to namedArea text field in distribution details view
Revision 20fd2b76 says "move also admin preference" but I can't find this preference in the admin preferences. Andreas Müller
02:15 PM feature request #8725 (Feedback): Add abbreviation to namedArea text field in distribution details view
Andreas Müller wrote:
> The preference should be moved from Factual Data to UI->Distribution Details View
Now it ...
Andreas Müller
12:27 PM feature request #8725 (Resolved): Add abbreviation to namedArea text field in distribution details view
Applied in changeset commit:taxeditor|4bff1cd7132b34fa100aaff28408278dc6e585a5. Katja Luther
11:23 AM feature request #8725: Add abbreviation to namedArea text field in distribution details view
The label should be changed to Show id in vocabulary in **area** textfield.
"Areal" in German.
Andreas Müller
11:18 AM feature request #8725 (Feedback): Add abbreviation to namedArea text field in distribution details view
The preference should be moved from Factual Data to UI->Distribution Details View Andreas Müller
02:12 PM feature request #8906 (Closed): Refactor DNA Sample details view
Works as expected Andreas Müller
12:57 PM feature request #8906 (Resolved): Refactor DNA Sample details view
please review Katja Luther
12:56 PM feature request #8906: Refactor DNA Sample details view
Andreas Müller wrote:
> Katja Luther wrote:
>
> > But we should create a new ticket to think about refactoring th...
Katja Luther
12:52 PM feature request #8906: Refactor DNA Sample details view
Andreas Müller wrote:
> As also commented in #8910 the show determinations only for field units preference does not ...
Katja Luther
12:52 PM feature request #8906 (Feedback): Refactor DNA Sample details view
Andreas Müller wrote:
> Determinations work now can we still add "Accession number" below "Barcode" as this is the d...
Katja Luther
12:50 PM feature request #8906 (Resolved): Refactor DNA Sample details view
Applied in changeset commit:taxeditor|c70ef402e57300c8b5f597afbb6a747ce78ccd3c. Katja Luther
11:30 AM feature request #8906: Refactor DNA Sample details view
As also commented in #8910 the show determinations only for field units preference does not yet work for the new DNA ... Andreas Müller
11:24 AM feature request #8906 (Feedback): Refactor DNA Sample details view
Determinations work now can we still add "Accession number" below "Barcode" as this is the default id field for impor... Andreas Müller
09:50 AM feature request #8906: Refactor DNA Sample details view
For reviewing: is there anything else that is new or changed in the DNA details view beside determinations? Andreas Müller
09:48 AM feature request #8906: Refactor DNA Sample details view
Katja Luther wrote:
> But we should create a new ticket to think about refactoring the details view of specimen in...
Andreas Müller
02:02 PM bug #8910 (Closed): Correct handling of preference for determinations
Andreas Müller wrote:
> This works now but only for the "new" determinations in DNA Details View it does not yet wor...
Katja Luther
11:29 AM bug #8910: Correct handling of preference for determinations
This works now but only for the "new" determinations in DNA Details View it does not yet work. Andreas Müller
11:28 AM bug #8910 (Feedback): Correct handling of preference for determinations
Katja Luther wrote:
> the problems are solved, they where caused by an empty combo box
Yes the above problem is s...
Andreas Müller
09:14 AM bug #8910 (Resolved): Correct handling of preference for determinations
the problems are solved, they where caused by an empty combo box Katja Luther
02:00 PM bug #8552 (Closed): Avoid DB call for matrix state DB preferences
Katja Luther
12:55 PM bug #8946 (New): Refactor DerivedUnit Details view
For all details views for the derived unit a derived unit facade is created, but depending on the selection providing... Katja Luther
12:53 PM feature request #8945 (Resolved): support statistical value type ExactValue (29736701-58c4-48b3-a9d7-41c74140cac7)
this is solved now, even if in a preliminar way.
Andreas Kohlbecker
12:02 PM feature request #8945: support statistical value type ExactValue (29736701-58c4-48b3-a9d7-41c74140cac7)
needs to be fixed for 5.13 as the error is visible in the portal even with specimen
descriptions as running text
Andreas Kohlbecker
11:02 AM feature request #8945 (Resolved): support statistical value type ExactValue (29736701-58c4-48b3-a9d7-41c74140cac7)
Unsupported statistical value type: 29736701-58c4-48b3-a9d7-41c74140cac7
Should be quick to fix!!!!
e.g.: http:...
Andreas Kohlbecker
12:52 PM Revision a82a476a (cdm-dataportal): ref #8945 preliminar support for statistical value type ExactValue
Andreas Kohlbecker
12:51 PM Revision 20fd2b76 (taxeditor): fix #8725: move also admin preference
Katja Luther
12:46 PM Revision c70ef402 (taxeditor): fix #8906: show determinations only if preference allow it
Katja Luther
12:27 PM Revision 4bff1cd7 (taxeditor): fix #8725: move preference
Katja Luther
11:08 AM Revision d2a769df (cdmlib): Revert "fix #8932 configuring swagger to support overloaded controller methods"
This reverts commit c916a82aeea2d702daa12cd607f5bd5acc25a57f. Andreas Kohlbecker
11:06 AM bug #8932 (In Progress): Swagger does not distinguish overloaded controller endpoints
`enableUrlTemplating(true)` causes problems with swagger-ui.
we need to switch to a swagger ui version which suppo...
Andreas Kohlbecker
10:41 AM bug #8428 (Closed): NPE in ClassificationServiceImpl.loadTreeBranchToTaxon()
The NPE is no longer reproducible:
http://test.e-taxonomy.eu/cdmserver/euromed/portal/classification/314a68f9-8449...
Andreas Kohlbecker
10:36 AM feature request #980 (New): Links to relevant external website(s) in taxon pages
Andreas Kohlbecker
09:26 AM Revision cc10a813 (taxeditor): fix #8910: fix NPE in empty Combo box
Katja Luther
07:44 AM bug #8944: Handle org.springframework.security.authentication.DisabledException explicitely
I changed the subject to describe the task closer - hope this is in your sense Andreas. Andreas Kohlbecker
07:39 AM bug #8911 (Closed): LazyInitializationException (LIE) in portal/description/{uuid}
there are no other suspect spots. Andreas Kohlbecker

04/07/2020

11:48 PM feature request #8906: Refactor DNA Sample details view
See #8910#note-5 for a possible regression Andreas Müller
11:47 PM bug #8910 (Feedback): Correct handling of preference for determinations
I get an exception when choosing an ordinary specimen (derived unit) in specimen tree editor
~~~
last remote meth...
Andreas Müller
11:21 PM Revision b2ef3733 (taxeditor): cleanup
Andreas Müller
06:44 PM bug #8911: LazyInitializationException (LIE) in portal/description/{uuid}
Andreas Müller wrote:
> The above link already works on production. Has this issue been hotfixed already?
upps, n...
Andreas Müller
06:35 PM bug #8911 (Feedback): LazyInitializationException (LIE) in portal/description/{uuid}
The above link already works on production. Has this issue been hotfixed already?
Andreas Müller
06:41 PM Revision c181cf34 (cdmlib): cleanup
Andreas Müller
06:38 PM Revision a4215a6f (cdmlib): cleanup
Andreas Müller
06:32 PM bug #8913 (Closed): InInVoc not showing up anymore in TermEditor
Works as expected Andreas Müller
06:21 PM bug #8904 (Closed): Show "cloned" icon in factual data view
Works as expected Andreas Müller
06:15 PM bug #8917 (Closed): NPE when opening Acacia in Name bulk editor (from search)
works as expected Andreas Müller
06:06 PM Revision 0f7a4af3 (taxeditor): cleanup
Andreas Müller
06:01 PM feature request #8926 (Closed): Remove 'expired' flags in users details
correct Andreas Müller
05:58 PM bug #8944 (New): Handle org.springframework.security.authentication.DisabledException explicitely
If one tries to login as an disabled user an "unexpected error" is thrown.
But a disabled user should not be an un...
Andreas Müller
05:53 PM bug #8938 (Closed): ProposalProvider in NameRelationshiptype combo does not work as expected
Seems to work as expected Andreas Müller
05:50 PM bug #8943 (Closed): Term Preferences are not correctly handled in combo boxes
Seems to work Andreas Müller
03:43 PM bug #8943: Term Preferences are not correctly handled in combo boxes
now the handling of term preferences should work like expected.Please review. Katja Luther
03:39 PM bug #8943 (Resolved): Term Preferences are not correctly handled in combo boxes
Applied in changeset commit:taxeditor|33c10482605414dedddd643befbdff7559897b9e. Katja Luther
03:38 PM bug #8943 (Closed): Term Preferences are not correctly handled in combo boxes
mail WB:
Hallo,
ich hatte mich da schon vor einiger Zeit dran versucht, war aber wieder abgekommen: Wie kann man ...
Katja Luther
05:41 PM bug #8942 (Closed): Exception when try to get text of TextualTypeDesignation with language which is not available
Correct Andreas Müller
05:35 PM bug #8940 (Closed): The export wizard does not remember last selected folder
Seems to work as expected Andreas Müller
05:29 PM bug #8939: Exception when opening Distribution Editor because of missing Preference
But handling of defaults (as implemented for most other preferences) is still not missing. This is mentioned in #8047... Andreas Müller
05:18 PM bug #8939 (Closed): Exception when opening Distribution Editor because of missing Preference
Seems to work as expected Andreas Müller
05:11 PM Revision 88d335c7 (taxeditor): cleanup
Andreas Müller
03:40 PM Revision 33c10482 (taxeditor): fix #8943: fix handling of term preferences in combo boxes and code cleaning
Katja Luther

04/06/2020

12:15 PM bug #8942: Exception when try to get text of TextualTypeDesignation with language which is not available
please review. Katja Luther
12:14 PM bug #8942 (Resolved): Exception when try to get text of TextualTypeDesignation with language which is not available
Applied in changeset commit:cdmlib|a2bd245128ad90fe14d5790ef26ef031176522a5. Katja Luther
12:09 PM bug #8942 (Closed): Exception when try to get text of TextualTypeDesignation with language which is not available

~~~
java.lang.NullPointerException
at eu.etaxonomy.cdm.model.name.TextualTypeDesignation.getText(TextualTypeDe...
Katja Luther
12:14 PM Revision a2bd2451 (cdmlib): fix #8942: fix NPE for not existing language
Katja Luther
11:30 AM bug #8941: Exception when opening taxon from taxonnavigator by double click
this exception is caused in the eclipse method showPart, maybe the part is not available. Katja Luther
11:28 AM bug #8941 (New): Exception when opening taxon from taxonnavigator by double click

mail WB:
Hallo,
parallel läuft ein Export, vielleicht zu viel auf einmal?
Passieren tut anschließend nichts.
H...
Katja Luther
10:50 AM bug #8939: Exception when opening Distribution Editor because of missing Preference
please review Katja Luther
10:13 AM bug #8939 (Resolved): Exception when opening Distribution Editor because of missing Preference
Applied in changeset commit:taxeditor|c6df97c52c7252b0fdd708029155ddfca164ffaf. Katja Luther
09:49 AM bug #8939 (In Progress): Exception when opening Distribution Editor because of missing Preference
Katja Luther
09:48 AM bug #8939 (Closed): Exception when opening Distribution Editor because of missing Preference
Dear Andreas,
I would like to report an error, when I try "Opening in..." "Distribution editor", I get the message...
Katja Luther
10:49 AM bug #8940: The export wizard does not remember last selected folder
please review Katja Luther
10:48 AM bug #8940 (Resolved): The export wizard does not remember last selected folder
Applied in changeset commit:taxeditor|7e48c2ec9b8eb389cc9659c4f62621c9b078dd68. Katja Luther
10:47 AM bug #8940 (Closed): The export wizard does not remember last selected folder
When opening the export wizard the last selected export folder was shown in the text field, this is not the case anym... Katja Luther
10:49 AM Revision 7e48c2ec (taxeditor): fix #8940: the last selected folder of export wizard correctly handled as local preference
Katja Luther
10:25 AM Revision 2f693358 (taxeditor): code cleaning
Katja Luther
10:14 AM Revision c6df97c5 (taxeditor): fix #8939: fix getIntValue for preference with no db and no local preference
Katja Luther
10:06 AM feature request #8931: Taxeditor supports https
There are no problems connecting the production server api.cybertaxonomy.org:443
So the problem above seems rather...
Andreas Kohlbecker
09:23 AM feature request #8931: Taxeditor supports https
Atlassian provides detaild information on this problem at https://confluence.atlassian.com/kb/unable-to-connect-to-ss... Andreas Kohlbecker
08:29 AM feature request #8931: Taxeditor supports https
Connecting the test server (test.e-taxonomy.eu) via https fails with:
~~~
....
Caused by: sun.security.validator...
Andreas Kohlbecker
09:38 AM bug #8938: ProposalProvider in NameRelationshiptype combo does not work as expected
please review Katja Luther
09:27 AM bug #8938 (Resolved): ProposalProvider in NameRelationshiptype combo does not work as expected
Applied in changeset commit:taxeditor|e2561ea7d4c417afe58d8bebf60c28146abb3f1c. Katja Luther
09:13 AM bug #8938 (Closed): ProposalProvider in NameRelationshiptype combo does not work as expected
The ProposalProvider does not set the selection for the combo element, therefore the finish button is not enabled. Katja Luther
09:28 AM Revision e2561ea7 (taxeditor): fix #8938: fix proposal provider in namerelationshiptype combo
Katja Luther
08:43 AM feature request #8926 (Resolved): Remove 'expired' flags in users details
Katja Luther
08:25 AM Revision 70fa5baf (taxeditor): ref #8931 using https for port 443
Andreas Kohlbecker

04/05/2020

08:22 AM Revision 427f72de (cdmlib): ref #8934 adapt Feature and Taxon for FoG status import
Andreas Müller
08:22 AM Revision 1ff45f55 (cdmlib): cleanup
Andreas Müller
08:19 AM Revision 022b6478 (cdmlib-apps): Merge branch 'master' of ssh://dev.e-taxonomy.eu/var/git/cdmlib-apps
Andreas Müller
08:18 AM Revision 03502975 (cdmlib-apps): ref #8886 minor fix for lichenes genera import
Andreas Müller
08:17 AM Revision abb5d466 (cdmlib-apps): ref #8934 implement FoG status import
Andreas Müller
08:16 AM Revision b180267e (cdmlib-apps): cleanup
Andreas Müller

04/03/2020

04:00 PM bug #8937 (New): Missing synonymy for certain synonymy tab state in portal configuration
If "Tabbed taxon page" is switched off while "Synonymy as tab" is switched on the tab is remembered as switched on:
...
Andreas Müller
03:29 PM bug #8936 (Closed): Improve default distribution formatting
Currently the default is
* Level 0-Label suffix: ":"
* Level 1-Item group prefix: ","
This result in Text like...
Andreas Müller
02:29 PM bug #8935: Specimen Table: improved and more complete details row for character data
Hallo,
"... Ich denke es gibt auch keinen Grund nur die Daten der PreferredSpecimen bzw. der Derivate anzuze...
Andreas Kohlbecker
02:29 PM bug #8935: Specimen Table: improved and more complete details row for character data
Hallo,

vielen Dank für die Info, da hatte ich mir wohl einiges falsch gemerkt.

Wenn ich es richtig ve...
Andreas Kohlbecker
02:28 PM bug #8935: Specimen Table: improved and more complete details row for character data
Hallo,

ein gutes Beispiel ist Campanula aucheri im Campanula-Portal:

http://campanula.e-taxonomy.net/...
Andreas Kohlbecker
02:28 PM bug #8935 (New): Specimen Table: improved and more complete details row for character data

**TODO:**
* show all units (FieldUnit + all Derived Units) by the short label
* if a unit has more than one s...
Andreas Kohlbecker
02:24 PM feature request #4383: multiple issues with de-duplication of references in bibliography
another case of failing deduplication:
http://portal.cybertaxonomy.org/flora-de-la-republica-de-cuba/cdm_dataporta...
Andreas Kohlbecker
12:59 PM task #8934 (Closed): Import new FoG status data
Andreas Müller
12:42 PM bug #8916 (Closed): ConcurrentModificationException in CdmFormFactory.destroyElement()
I could not reproduce the exception anymore and the solution seems to be correct. Katja Luther
12:21 PM bug #8916: ConcurrentModificationException in CdmFormFactory.destroyElement()
The above fix can not work because the remove is not called on the iterator. I changed the code in a way that a tempo... Andreas Müller
12:41 PM task #8928: Swap menu entries for specimen bulk editors
Andreas Müller wrote:
> Katja Luther wrote:
> > Andreas Müller wrote:
> > > This I expect to be a no-brainer there...
Katja Luther
12:40 PM task #8928: Swap menu entries for specimen bulk editors
Katja Luther wrote:
> Andreas Müller wrote:
> > This I expect to be a no-brainer therefore I moved it to 5.14. If n...
Andreas Müller
11:12 AM task #8928: Swap menu entries for specimen bulk editors
Andreas Müller wrote:
> This I expect to be a no-brainer therefore I moved it to 5.14. If not please move further.
...
Katja Luther
12:35 PM feature request #8725: Add abbreviation to namedArea text field in distribution details view
please review Katja Luther
12:32 PM feature request #8725 (Resolved): Add abbreviation to namedArea text field in distribution details view
Applied in changeset commit:taxeditor|de0fd82683fcaa892d6e6b55457d2088f9c31315. Katja Luther
12:32 PM Revision de0fd826 (taxeditor): fix #8725: show IDinVoc in NamedArea Textfield, add preference to make it configurable
Katja Luther
12:32 PM Revision c59a038a (cdmlib): ref #8725: add preferencePredicate for showIdInVoc in textfield
Katja Luther
12:27 PM task #8886 (Closed): Import Lichenes Genera
Generally this is fixed. Details will be discussed via Mail. Andreas Müller
12:26 PM bug #8918 (Closed): Add "set as basionym" to accepted taxon
Seems to work as expected Andreas Müller
12:24 PM bug #8919 (Closed): Shorten label for "Reference Detail"
fixed and looks better as there is more space for the reference title now Andreas Müller
12:18 PM Revision 9bc35d79 (taxeditor): ref #8916 try to fix ConcurrentModificationException by using temporary set
Andreas Müller
12:04 PM bug #8933: Registration UI: Views must not persist empty annotations
We should also cleanup data once this is fixed. Andreas Müller
11:45 AM bug #8933 (New): Registration UI: Views must not persist empty annotations
ich sehe gerade, dass es in Phycobank jede Menge leere Annotations gibt, also welche bei denen der Text leer ist. Das... Andreas Kohlbecker
11:46 AM bug #8932 (Closed): Swagger does not distinguish overloaded controller endpoints
fixed Andreas Kohlbecker
11:46 AM bug #8932 (Resolved): Swagger does not distinguish overloaded controller endpoints
Applied in changeset commit:cdmlib|c916a82aeea2d702daa12cd607f5bd5acc25a57f. Andreas Kohlbecker
11:36 AM bug #8932 (In Progress): Swagger does not distinguish overloaded controller endpoints
the BaseListController defines three mappings for /{type}/
* doList(Integer, Integer, Class<T>, HttpServletRequest...
Andreas Kohlbecker
11:46 AM Revision 14af18d0 (taxeditor): cleanup
Andreas Müller
11:46 AM Revision c916a82a (cdmlib): fix #8932 configuring swagger to support overloaded controller methods
Andreas Kohlbecker
10:59 AM bug #8927 (Closed): Fix isAdmin() method in LoginManager
Katja Luther
10:53 AM feature request #8930: Publishable objects should show icon if they are unpublished
mail WB:
In diesem Zusammenhang wollte ich auch anregen, die als doubtful markierten Taxa auch im Navigator mit de...
Katja Luther
10:17 AM feature request #8930 (Closed): Publishable objects should show icon if they are unpublished
To avoid that someone accidentally switches the publish flag of and generally to immediately now that a taxon is not ... Andreas Müller
10:53 AM Revision c2530585 (cdmlib): ref ref #8815 adding condition which was lost during conflict resolution
Andreas Kohlbecker
10:51 AM Revision ad8a2564 (taxeditor): adding workbench.xmi to ignored files
Andreas Kohlbecker
10:36 AM feature request #8931 (Closed): Taxeditor supports https
The Taxeditor seems not able to connect cdm instances via https.
With this configuration:
~~~json
{
"name" ...
Andreas Kohlbecker
09:12 AM bug #8925 (Closed): Users with ROLE_USER_MANAGER must be able to change any user password
added the userHelper() method, so the ticket can be closed. Katja Luther
09:11 AM bug #8925 (Resolved): Users with ROLE_USER_MANAGER must be able to change any user password
Applied in changeset commit:taxeditor|b43aa78568358b5022da911216fe5013783256b1. Katja Luther
09:12 AM Revision b43aa785 (taxeditor): fix #8925: add userHelper() method to avoid redundancy
Katja Luther

04/02/2020

11:43 PM feature request #8929 (New): Add "open folder" button to file/folder based exports
e.g. for DwC-A export and CDMLight but maybe also for other exports.
The button should appear on the result dialo...
Andreas Müller
11:24 PM task #8928: Swap menu entries for specimen bulk editors
This I expect to be a no-brainer therefore I moved it to 5.14. If not please move further. Andreas Müller
11:23 PM task #8928 (Closed): Swap menu entries for specimen bulk editors
AM:
Können wir die Specimen-Einträge im Bulk-Editor Menü tauschen. Ich denke Specimen(Tree) ist der bei weitem meh...
Andreas Müller
11:16 PM feature request #8891 (Closed): Add categorical and quantiative data to DwC-A
Constantia (FoG) tested the new implementation and told me it worked as expected for her. So I close this ticket as t... Andreas Müller
04:45 PM bug #8925 (Feedback): Users with ROLE_USER_MANAGER must be able to change any user password
I tested the functionality and this works now as expected. So this ticket can be closed apart from the above suggestion. Andreas Kohlbecker
04:31 PM bug #8925: Users with ROLE_USER_MANAGER must be able to change any user password
please create an access method like:
~~~java
private UserHelper userHelper() {
if (userHelper == null){...
Andreas Kohlbecker
03:38 PM bug #8925: Users with ROLE_USER_MANAGER must be able to change any user password
please review Katja Luther
12:05 PM bug #8925 (Resolved): Users with ROLE_USER_MANAGER must be able to change any user password
Applied in changeset commit:taxeditor|bfedf5f3d8e57c764333f355c09444dee9292ab5. Katja Luther
10:53 AM bug #8925 (Closed): Users with ROLE_USER_MANAGER must be able to change any user password
For users with ROLE_USER_MANAGER the button in the User details view to change a users password must be generally ena... Andreas Kohlbecker
04:15 PM bug #8815: Clean up TaxonNodeDto and UuidAndTitleCache usage in TaxonNodeService/Dao
Hi Katja, I reverted the return types again from UuidAndTitleCache to TaxonNodeDto
Please review.
Andreas Kohlbecker
04:14 PM Revision 925237ad (cdmlib): ref #8815 reverting return types from UuidAndTitleCache to TaxonNodeDto
Andreas Kohlbecker
04:14 PM Revision 05daad66 (cdmlib): Revert "ref #8815: add UuidAndTitleCache methods again in taxonnodeservice"
This reverts commit 47c1bab5d954d21e17653072c211a7ae53e53e97 + 75e3aef5f2a567e2833c03f13194b062a5d58947
Resolved Con...
Andreas Kohlbecker
04:14 PM Revision 4a186e0a (cdmlib): ref #6113 adding dependency to KML types
Andreas Kohlbecker
04:12 PM task #8834 (Closed): use TaxonNodeDto instead of UuidAndTitleCache
done. Andreas Kohlbecker
04:11 PM Revision 0d7a94de (cdm-vaadin): ref #8834 UuidAndtitleCache replaced by TaxonNodeDto
Andreas Kohlbecker
02:57 PM Revision 7c6f3c4d (cdmlib-apps): fix #8886 minor changes to lichenes genera import
Andreas Müller
02:46 PM Revision e35a72c0 (cdmlib-apps): cleanup poms in cdmlib-app
Andreas Müller
02:44 PM task #8886 (Resolved): Import Lichenes Genera
Applied in changeset commit:cdmlib-apps|1773366920844ffb75b8ef5a21e2e8e778d0e107. Andreas Müller
02:40 PM Revision 17733669 (cdmlib-apps): fix #8886 finalize lichenes genera import
Andreas Müller
01:28 PM Revision 1e61fa5c (taxeditor): fix #8925: activate user and usergroup menu for userManager
Katja Luther
01:04 PM Revision 21a9887f (cdmlib): cleanup
Andreas Müller
01:04 PM Revision 2f705779 (cdmlib): ref #8886 add Fungi to NonViralNameParserImpl
Andreas Müller
01:04 PM Revision ac56518d (cdmlib): remove redundant factory code in User
Andreas Müller
12:06 PM Revision bfedf5f3 (taxeditor): fix #8925: and fix #8927 use role_admin for check whether user is admin and check for user_manager for right to edit pwd
Katja Luther
12:05 PM bug #8927 (Resolved): Fix isAdmin() method in LoginManager
Applied in changeset commit:taxeditor|bfedf5f3d8e57c764333f355c09444dee9292ab5. Katja Luther
12:03 PM bug #8927 (Closed): Fix isAdmin() method in LoginManager
The isAdmin() method uses only the name of the user to check whether the user is admin or not, but should use the rol... Katja Luther
11:01 AM feature request #8926 (Closed): Remove 'expired' flags in users details
The fields 'Account Non Expired', 'Account locked', 'Credentials non Expired' are not used yet, so they should not be... Katja Luther
10:47 AM Revision f743c072 (taxeditor): make all expired flags for users invisible
Katja Luther
09:38 AM bug #8916: ConcurrentModificationException in CdmFormFactory.destroyElement()
Avoid the ConcurrentModificationException by using an iterator for iterating over the elements of a set to destroy th... Katja Luther
09:22 AM bug #8916 (Resolved): ConcurrentModificationException in CdmFormFactory.destroyElement()
Applied in changeset commit:taxeditor|002ea91bea2170b2f7307f8c7bf791e7c6ab28e0. Katja Luther
09:37 AM Revision c2286033 (taxeditor): fix #8916: avoid concurrent modification exception
Katja Luther
09:22 AM Revision 002ea91b (taxeditor): fix #8916: avoid concurrent modification exception
Katja Luther

04/01/2020

03:19 PM Revision 44f44469 (cdm-dataportal): commenting dead code
Andreas Kohlbecker
03:13 PM feature request #8895: Specimen page: show specimen description as continuous text
Andreas Müller wrote:
> Is there a link on test for reviewing? Then maybe also Norbert can have a look if it looks a...
Andreas Kohlbecker
03:01 PM feature request #8895 (Resolved): Specimen page: show specimen description as continuous text
Is there a link on test for reviewing? Then maybe also Norbert can have a look if it looks as expected. Andreas Müller
02:39 PM feature request #8895 (Closed): Specimen page: show specimen description as continuous text
done Andreas Kohlbecker
02:39 PM feature request #8895 (Resolved): Specimen page: show specimen description as continuous text
Applied in changeset commit:cdm-dataportal|2527a83cee421e06ea133960964442d2fd19905a. Andreas Kohlbecker
02:05 PM feature request #8895 (In Progress): Specimen page: show specimen description as continuous text
Andreas Kohlbecker
02:50 PM bug #8923 (Duplicate): NullPointerException (NPE) after attempt to save invalid Group name
This duplicates #7699 Andreas Müller
02:11 PM bug #8923: NullPointerException (NPE) after attempt to save invalid Group name
Is this easy to fix? Otherwise move to next milestone. Andreas Müller
12:50 PM bug #8923 (Duplicate): NullPointerException (NPE) after attempt to save invalid Group name
Group editor:
* Change exiting Group name to invalid name (add whitespace character)
* Save --> Error due to in...
Andreas Kohlbecker
02:38 PM Revision 2527a83c (cdm-dataportal): fix #8895 fix showing specimen descriptions as running text
Andreas Kohlbecker
02:36 PM Revision 26149ae1 (cdm-dataportal): fix showing specimen descriptions as running text
Andreas Kohlbecker
01:55 PM Revision f6524e30 (taxeditor): fix #8904: show copy icon as clone icon in factual data view
Katja Luther
01:55 PM bug #8904 (Resolved): Show "cloned" icon in factual data view
Applied in changeset commit:taxeditor|f6524e305046c69ff209143af2c4a12d36bad975. Katja Luther
01:52 PM feature request #8471: Computed descriptions should be disabled in TaxEditor
I did some research but it seems to be a little bit more complex because this needs to be implemented by a mouseListe... Katja Luther
01:30 PM bug #7376: doubtful taxa not easy to find
Vielleicht sollten wir überlegen ob die hier verwendete Suche tatsächlich die Richtige ist. Vermutlich wird hier doch... Andreas Kohlbecker
01:23 PM bug #8924 (New): Select dialog for GrantedAuthorities is unusable with many GAs in the DB
In the phycobank db the select dialog for GrantedAuthorities completely blocks the whole editor. Andreas Kohlbecker
11:40 AM Revision 21938b11 (taxeditor): fix #8906: adapt dnaSample details view creation to other derived units
Katja Luther
11:39 AM feature request #8906: Refactor DNA Sample details view
Applied in changeset commit:taxeditor|21938b114f742509677d4d883f91f0883dc70683. Katja Luther
11:34 AM feature request #8906 (Resolved): Refactor DNA Sample details view
Now, the dna sample details view is handled analogue to the other derived units. So the determination can be shown, n... Katja Luther
11:14 AM bug #8428 (Resolved): NPE in ClassificationServiceImpl.loadTreeBranchToTaxon()
Applied in changeset commit:cdmlib|380b0e353b61b451d378c7d4341c111a11534c32. Andreas Kohlbecker
11:13 AM bug #8428: NPE in ClassificationServiceImpl.loadTreeBranchToTaxon()
observed again :
~~~
[algaterra] 2020-03-29 10:00:50,924 INFO [qtp1018547642-5078] [eu.etaxonomy.cdm.remote.contr...
Andreas Kohlbecker
11:14 AM Revision 380b0e35 (cdmlib): fix #8428 avoiding NPE
Andreas Kohlbecker
10:57 AM task #8379: Review strange specimen implementations
Andreas Müller wrote:
> I think we decided to move this issue to AK. Please correct me if wrong.
Yes, exactly. Bu...
Andreas Kohlbecker
10:47 AM task #8379: Review strange specimen implementations
I think we decided to move this issue to AK. Please correct me if wrong.
Please also decide which milestone it sho...
Andreas Müller

03/31/2020

03:22 PM feature request #8922 (Duplicate): Make setting of sec-Reference configurable when moving synonyms.
Currently the sec ref is automatically taken from the new accepted taxon when moving (or adding) a synonym. This is n... Andreas Müller
11:25 AM bug #8917: NPE when opening Acacia in Name bulk editor (from search)
this should be fixed, please review Katja Luther
11:24 AM bug #8917 (Resolved): NPE when opening Acacia in Name bulk editor (from search)
Applied in changeset commit:taxeditor|163a48b01b39469cfa576645eacc98e303b9f9eb. Katja Luther
11:25 AM Revision 163a48b0 (taxeditor): fix #8917: fix open_in Bulkeditor
Katja Luther
11:10 AM bug #8905 (Resolved): Description Handling in ABCD import
Katja Luther
08:51 AM bug #8905: Description Handling in ABCD import
Andreas Müller wrote:
> Katja Luther wrote:
> > The description handling is fixed now, but another problem is the t...
Katja Luther
08:49 AM bug #8905: Description Handling in ABCD import
Katja Luther wrote:
> The description handling is fixed now, but another problem is the titlecache creation. After a...
Andreas Müller
08:40 AM bug #8905: Description Handling in ABCD import
The description handling is fixed now, but another problem is the titlecache creation. After adding a new source to t... Katja Luther
11:04 AM bug #8918: Add "set as basionym" to accepted taxon
please review Katja Luther
11:03 AM bug #8918 (Resolved): Add "set as basionym" to accepted taxon
Applied in changeset commit:taxeditor|2bef172d75871c83d777b56b7bc5d552f4fcea2e. Katja Luther
08:55 AM bug #8918: Add "set as basionym" to accepted taxon
If not easy to implement please move to other milestone. Andreas Müller
08:54 AM bug #8918 (Closed): Add "set as basionym" to accepted taxon
WGB:
eine kleine Verbesserungsmöglichkeit: Bei den Synonymen der heterotypischen Gruppen kann man im NameEditor (ü...
Andreas Müller
11:04 AM Revision 2bef172d (taxeditor): fix #8918: setBasionym also for accepted taxon
Katja Luther
09:20 AM Revision efd5530a (taxeditor): fix #8919: shorten reference detail label
Katja Luther
09:19 AM bug #8919 (Resolved): Shorten label for "Reference Detail"
Applied in changeset commit:taxeditor|efd5530a08f475114b948ccc86cd76742ef62096. Katja Luther
08:58 AM bug #8919 (Closed): Shorten label for "Reference Detail"
Use "Ref. Detail" instead.
In Details View for nom. ref.
Andreas Müller
09:19 AM bug #8921 (New): Set sec for subtree not always successful
WGB:
ich glaube, ich hatte gerade wieder den Fall, den ich schon letzte Woche bemerkt hatte.
Ich habe (in Caryoph...
Andreas Müller
09:08 AM feature request #8920 (New): Make reference URL available in details view
e.g. by having a button to open it or by having the label clickable and blue if an URL exists.
Note: in future the...
Andreas Müller
08:42 AM Revision 78bba475 (cdmlib): ref #8905: fix description handling in specimen imports
Katja Luther

03/30/2020

04:21 PM Revision f84a4e81 (cdmlib): ref #8907 adapting method to SortableTaxonNodeQueryResult - adding test
Andreas Kohlbecker
04:06 PM Revision 5db2ebcd (cdmlib): ref #8907 adapting method to SortableTaxonNodeQueryResult and fixing NPE
Andreas Kohlbecker
03:12 PM bug #8917: NPE when opening Acacia in Name bulk editor (from search)
Please delete the orphaned name after fixing this ticket. Andreas Müller
03:06 PM bug #8917 (Closed): NPE when opening Acacia in Name bulk editor (from search)
in FoG.
* Search for Acacia ( in FoG)
* Open the pure name (orphaned name) via context menu -> bulk editor
* =>...
Andreas Müller
01:27 PM bug #8899 (Closed): NullPointerException (NPE) in ManifestController
solved and tested at the example given in the description Andreas Kohlbecker
01:26 PM bug #8899 (Resolved): NullPointerException (NPE) in ManifestController
Applied in changeset commit:cdmlib|9fc7d8affc2e6c2bc83bc86dac76eec14ce5d8a3. Andreas Kohlbecker
01:26 PM Revision 9fc7d8af (cdmlib): fix #8899 fixing 4 NPEs in ManifestController
Andreas Kohlbecker
12:31 PM Revision 3c9af367 (cdmlib): ref #8907 adding missing constructor to hql query
Andreas Kohlbecker
11:55 AM bug #8916: ConcurrentModificationException in CdmFormFactory.destroyElement()
mail WB:
Hallo,
nach Save nach Ändern der sec.-Ref. im Details-View.
HG
W
~~~
last remote method : http:/...
Katja Luther
11:54 AM bug #8916: ConcurrentModificationException in CdmFormFactory.destroyElement()
mail WB:
Hallo,
entfernen der Doubtful-Flag im Details View, Save -> Fehler
HG
W
~~~
last remote method : h...
Katja Luther
11:53 AM bug #8916 (In Progress): ConcurrentModificationException in CdmFormFactory.destroyElement()
While updating the views sometimes a ConcurrentModificationException appears while AbstractCdmDataViewerE4.destroySec... Katja Luther
11:39 AM bug #8857: NonUniqueObjectException when creating new taxon
another time:
mail WB:
Hallo,
beim Erstellen eines neuen Taxon aus dem Navigator heraus.
HG
W
~~~ text
...
Katja Luther

03/29/2020

08:22 AM Revision a77d57ae (cdmlib-apps): cleanup
Andreas Müller
08:20 AM Revision 6e5a5397 (cdmlib-apps): ref #8886 first not yet compiling version of Lichenes import
Andreas Müller

03/27/2020

07:17 PM bug #8915 (Duplicate): ID in Vocabulary is not shown in term editor
Katja Luther
07:15 PM bug #8915 (Duplicate): ID in Vocabulary is not shown in term editor
The ID in VOcabulary is not shown anymore in the label of the term editor, also if the preference is set to "Show ID ... Katja Luther
05:57 PM bug #8914 (Closed): jetty 9.4.x returns error states as json which are parsed and processes by cdm_dataportal
Andreas Kohlbecker
05:38 PM bug #8914 (Resolved): jetty 9.4.x returns error states as json which are parsed and processes by cdm_dataportal
Applied in changeset commit:cdm-dataportal|4e5b23aeacdb46064b71a6f76354862ff61223ee. Andreas Kohlbecker
05:32 PM bug #8914: jetty 9.4.x returns error states as json which are parsed and processes by cdm_dataportal
the original issue subject was a misinterpretation of the symptoms, the real cause is different - will change the tic... Andreas Kohlbecker
05:11 PM bug #8914 (Closed): jetty 9.4.x returns error states as json which are parsed and processes by cdm_dataportal
jetty 9.4.x returns error states as json which are parsed and processes by cdm_dataportal completely breaks with the ... Andreas Kohlbecker
05:42 PM Revision 159d2dd8 (cdm-dataportal): Merge tag '5.13.1' into develop
tagging 5.13.1 Andreas Kohlbecker
05:42 PM Revision 17e22c80 (cdm-dataportal): Merge branch 'hotfix/5.13.1'
Andreas Kohlbecker
05:41 PM Revision 3e88c44c (cdm-dataportal): fix #8914 replacing parsed jetty error responses by null (also ref #2711)
Andreas Kohlbecker
05:38 PM Revision 4e5b23ae (cdm-dataportal): fix #8914 replacing parsed jetty error responses by null (also ref #2711)
Andreas Kohlbecker
05:20 PM Revision 0ee7ae82 (cdmlib): cleanup
Andreas Müller
04:53 PM Revision 01ff0c5e (cdmlib): cleanup
Andreas Müller
04:46 PM Revision 68acc871 (cdmlib): cleanup and remove ITitleDao.findByTitleAndClass(xxx) (2)
Andreas Müller
04:36 PM bug #8911: LazyInitializationException (LIE) in portal/description/{uuid}
please review Andreas Kohlbecker
04:23 PM bug #8911 (Resolved): LazyInitializationException (LIE) in portal/description/{uuid}
Applied in changeset commit:cdmlib|f4bffe1d71350100bb634d183424a441c3777530. Andreas Kohlbecker
10:46 AM bug #8911 (Closed): LazyInitializationException (LIE) in portal/description/{uuid}
http://api.cybertaxonomy.org/caryophyllales_spp/portal/description/f4fc4b11-90c7-4a02-b236-2d58f5891e6e.json
~~~
...
Andreas Kohlbecker
04:24 PM Revision 6ade84be (cdmlib): cleanup and remove ITitleDao.findByTitleAndClass(xxx)
Andreas Müller
04:23 PM Revision f4bffe1d (cdmlib): fix #8911 fixing initstrategy for Taxon Descriptions
Andreas Kohlbecker
04:09 PM Revision 243e8f68 (cdmlib): cleanup
Andreas Müller
04:02 PM Revision 51132c21 (cdmlib): cleanup
Andreas Müller
03:47 PM bug #8536 (Duplicate): Connect Dialog: UI elements exceed the available space
Andreas Kohlbecker
03:46 PM bug #7189: Taxeditor connect dialog high-dpi suport
The same probelm exists in windows 10:
![](picture933-1.png)
(*Windows 10 at text size 150%*)
Andreas Kohlbecker
03:30 PM bug #8913 (Resolved): InInVoc not showing up anymore in TermEditor
Andreas Müller
03:29 PM bug #8913 (Closed): InInVoc not showing up anymore in TermEditor
... even if local preference for Term Editor is set to "show vocabulary id" Andreas Müller
03:27 PM Revision 74b13aca (cdm-vaadin): adapting to moved ReferenceEllypsisFormatter
Andreas Kohlbecker
12:11 PM Revision 7f063f2e (taxeditor): fix term label provider for term editor
Katja Luther
12:08 PM bug #8548 (Closed): ReferenceEditor: Layout problem when opening Reference editor (new journal, new book, new thesis)
Reviewed in the released production system. No problems. Set the ticket to closed. Wolf-Henning Kusber
11:34 AM Revision c6a73aed (cdmlib): fix correct handling of description configuration
Katja Luther
11:09 AM Revision 41ad665a (cdmlib): moving ReferenceEllypsisFormatter to package eu.etaxonomy.cdm.format.reference
Andreas Kohlbecker
10:43 AM feature request #8906: Refactor DNA Sample details view
Andreas Müller wrote:
> Katja Luther wrote:
> > Andreas Müller wrote:
> > > By the way the derivedUnitFacace was o...
Katja Luther
09:37 AM feature request #8906: Refactor DNA Sample details view
Katja Luther wrote:
> Andreas Müller wrote:
> > By the way the derivedUnitFacace was originally meant to work with ...
Andreas Müller
09:25 AM feature request #8906: Refactor DNA Sample details view
Andreas Müller wrote:
> By the way the derivedUnitFacace was originally meant to work with the Specimen list editor....
Katja Luther
10:21 AM bug #8910: Correct handling of preference for determinations
Andreas Müller wrote:
> AM:
>
> Wie soll denn jetzt die genaue Semantik sein? Ich würde ja vom Namen her denken, ...
Katja Luther
10:11 AM bug #8910: Correct handling of preference for determinations
AM:
Wie soll denn jetzt die genaue Semantik sein? Ich würde ja vom Namen her denken, dass die Determinations für F...
Andreas Müller
10:10 AM bug #8910 (Resolved): Correct handling of preference for determinations
Andreas Müller
10:06 AM bug #8910 (Closed): Correct handling of preference for determinations
Andreas Müller
09:37 AM Revision 10c5f268 (taxeditor): correct handling of pref determinations only for field units
Katja Luther

03/26/2020

05:19 PM task #8907 (Resolved): replace UuidAndTitleCacheTaxonComparator by type save implementation
ticket completed.
Andreas Kohlbecker
11:31 AM task #8907 (Resolved): replace UuidAndTitleCacheTaxonComparator by type save implementation
copied from #8892:
`UuidAndTitleCacheTaxonComparator` is used by different methods which pass Object array with d...
Andreas Kohlbecker
05:19 PM Revision 79ff326b (cdmlib): ref #8907 basing testGetTaxonNodeUuidAndTitleCacheOfacceptedTaxaByClassificationForNameWithoutRank on TaxonNodeDaoHibernateImplTest.findWithoutRank.xml
Andreas Kohlbecker
03:58 PM Revision 49bfebfd (cdmlib): ref #8907 cleaning up test data
Andreas Kohlbecker
03:44 PM Revision f4f6d97b (cdmlib): ref #8907 SortableTaxonNodeQueryResultComparator to replace UuidAndTitleCacheTaxonComparator - step 2
Andreas Kohlbecker
03:44 PM Revision db026829 (cdmlib): ref #8907 SortableTaxonNodeQueryResultComparator to replace UuidAndTitleCacheTaxonComparator
Andreas Kohlbecker
02:37 PM Revision 9f12da77 (cdmlib): cleanup
Andreas Müller
02:32 PM feature request #8906: Refactor DNA Sample details view
As this ticket is important for cleaning up additivity data I put it to the current milestone. Andreas Müller
02:31 PM feature request #8906: Refactor DNA Sample details view
By the way the derivedUnitFacace was originally meant to work with the Specimen list editor. For the tree editor it d... Andreas Müller
12:02 PM feature request #8906: Refactor DNA Sample details view
Especially determinations are missing there. Andreas Müller
11:24 AM feature request #8906 (Closed): Refactor DNA Sample details view
The DNA Sample details view is not handled like the other derived units by using the derivedUnitFacade. Katja Luther
01:12 PM bug #8733 (Closed): Descriptive data set: Specimens of a newly added taxon are not listed in Select Specimen dialog of the matrix editor
Andreas Müller wrote:
> The fix seems to improve the situation a lot. If the dataset is changed the specimen list is...
Andreas Kohlbecker
01:10 PM bug #8909: IAE (IllegalArgumentException) adding specimens to matrix editor
**NOTE:** The exception is not handled correctly. It is neither displayed by the usual error dialog not is the stackt... Andreas Kohlbecker
11:56 AM bug #8909 (New): IAE (IllegalArgumentException) adding specimens to matrix editor

this error popped up while testing for #8733
* Create new descriptive data set in caryphyllales_ssp
* addin...
Andreas Kohlbecker
11:48 AM task #8908 (New): Clean up descriptive dataset data for Cactaceae
Thinks to do:
* ~~remove empty DescriptionElementBase~~
* ~~remove aggregated taxon descriptions~~
* ~~remove cl...
Andreas Müller
11:33 AM bug #8892 (Closed): Taxon search does not work for names without rank
remaining tasks are copied to #8907, so we can close this ticket now Andreas Kohlbecker
11:22 AM bug #8905 (Closed): Description Handling in ABCD import
mail AM:
bei der Korrektur der Additivity Daten in caryo_spp fällt mir auf, dass wenn Specimen im Zuge von ABCD-DN...
Katja Luther
10:29 AM bug #8904 (Closed): Show "cloned" icon in factual data view
Otherwise it is only visible in the details view that the description is a cloned description which may easily lead t... Andreas Müller
10:21 AM bug #8903 (Closed): Remember expansion state in factual data view
When removing a description from factual data view afterwards all remaining descriptions are expanded. They should be... Andreas Müller

03/25/2020

07:26 PM feature request #8902 (New): Add "open in" menu to row menu in matrix editor
If the row represents a taxon or a taxon description the according taxon should be opened in name or bulk (name or ta... Andreas Müller
06:14 PM bug #8901 (Resolved): Deleting an aggregated description from a descriptive matrix does not delete the aggregated description itself
I removed aggregated taxon description via the matrix editor.
This did not remove the descriptions from their accord...
Andreas Müller
04:27 PM bug #8900 (Closed): Layout issues with new image viewer
see
* http://www.palmweb.org/cdm_dataportal/taxon/7c0b9529-1b28-4e1e-afda-089ac63f58a3/images#?c=&m=&s=&cv=&manif...
Andreas Kohlbecker
02:27 PM bug #8899 (Closed): NullPointerException (NPE) in ManifestController
Mostly happens in flora-malesiana, see below and also in
* /flora-guianas/iiif/taxon/2bc3831d-c5bd-435e-8058-8d62...
Andreas Kohlbecker
12:21 PM bug #8784 (Closed): Deleting a specimen description not possible
Andreas Müller
12:16 PM bug #8784: Deleting a specimen description not possible
Andreas Müller wrote:
> Hi Katja, I just tried to delete the "test data" as described in the description of this tic...
Katja Luther
11:43 AM Revision 1cf756d1 (taxeditor): fix problem with last selected references
Katja Luther

03/24/2020

05:22 PM bug #8784 (Feedback): Deleting a specimen description not possible
Hi Katja, I just tried to delete the "test data" as described in the description of this ticket and as required in co... Andreas Müller
11:37 AM Revision 75d2589a (taxeditor): Merge branch 'hotfix/5.13.1'
jenkins
11:17 AM Revision ad74c7f6 (taxeditor): fix problem with last selected references
Katja Luther
11:08 AM Revision 5c3b0220 (taxeditor): Updated version in pom / project files to taxeditor version : 5.13.1 and cdmlib version : 5.13.0
jenkins
12:16 AM bug #8790 (Closed): Update measurement units for existing quantitative data missing a unit
I did not write a script but all data was updated on production. Updates were needed on additivity_ontology, caryo_sp... Andreas Müller
 

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