Activity
From 03/23/2020 to 04/21/2020
04/21/2020
- 02:41 PM feature request #8968 (Closed): filter Bulk editor for created by
- Taxonomic Editor: Bulk editor
Feature request for: filter for "created by"
This would allow to find systematic ... - 02:38 PM feature request #8595 (Closed): Create description detail page
- All the rest seems to be fixed or even improved in the meanwhile. So I close this ticket.
- 02:37 PM feature request #8595: Create description detail page
- Geklonte SpecimenDescription brauchen Datum und Dataset im Titel => this is not yet fully implemented. Created new ti...
- 02:36 PM feature request #8967 (New): Improve label for cloned descriptions
- ... and maybe also other descriptions.
From #8595: "Geklonte SpecimenDescription brauchen Datum und Dataset im Tit... - 02:29 PM bug #8779 (Closed): Description page: use render_taxon_or_name() for creating the page and description title and taxon links
- Looks like this is fully fixed. Norbert, please reopen if there is an open issue with naming of taxa and names on the...
- 02:27 PM bug #8739 (Closed): remaining issues for description detail page
- This all seems to be implemented or moved to other tickets. Norbert, please reopen if you think some issues are not f...
- 02:13 PM bug #8966 (New): Name page: show types of related names as running text with the related name
- Example names:
* Navicula capitata Ehrenb (https://www.phycobank.org/cdm_dataportal/name/6b6539cd-9cb8-4748-9130-a... - 12:51 PM feature request #8758 (Closed): Aggregated Descriptions: order states by frequency
- I checked for Rhipsalis (http://caryophyllales.org/cactaceae/cdm_dataportal/taxon/b15ec01d-b909-4143-b197-e752b6f34d5...
- 12:44 PM feature request #8803 (Closed): Add "per mm²" to measurement units
- I checked on an old DB like globis and the new value is available there, too. So I close this ticket.
- 11:43 AM feature request #8208: Allow selecting property modifiers when creating a character
- I suggest to implement this only when we realize that we really need it.
- 11:40 AM feature request #8003: [DISUCSS] Implement "Export" on sub tree of FeatureTrees
- Probably we will not manage to implement this in 5.15. We also need to discuss who should work on it and how importan...
- 11:38 AM feature request #8453: Improve performance of DescriptiveDataSet
- This is probably a major task which can not be handled in 5.15. We also need to discuss who should work on it.
- 11:35 AM feature request #7675: Make columns with default values togglable
- Can you please check how work intensiv this is?
- 11:34 AM feature request #7580 (In Progress): User wishes: CharacterMatrix
- The status of this ticket to me is unclear. There are some commits so I guess it is at least in progress.
I don't k... - 11:21 AM feature request #8529: [DISCUSS]Display of aggregated descriptions
- This ticket is very vague and maybe it is completely handleded in other tickets already.
The first part of the des... - 11:15 AM bug #8903: Remember expansion state in factual data view
- Moving to additivity milestone. But in general remembering of expansion state currently does not work correctly in th...
- 11:13 AM feature request #8775: Improve (rapid) data entry into characater matrix for categorical data
- Moving to additivity milestone
- 11:12 AM feature request #8902: Add "open in" menu to row menu in matrix editor
- moving to additivity milestone
- 11:11 AM feature request #7774: Show description source for description elements
- Moving to additivity milestone
- 11:10 AM feature request #8742: Allow deleting vocabularies
- 5.15 is considered to be an additivity milestone. Therefore I move it to this milestone.
- 10:47 AM bug #8510: Non unique object exception when creating FeatureStates
- We should check if this is still an open issue and/or if it is related to any other of the term tree editing issues
- 10:36 AM bug #8959: Moving a synonym to the homotypical group of the accepted taxon opens the context menu of the accepted taxon
- Andreas Müller wrote:
> I did not review yet (editor is still building) but forgot to mention in the description tha... - 10:20 AM bug #8959: Moving a synonym to the homotypical group of the accepted taxon opens the context menu of the accepted taxon
- I did not review yet (editor is still building) but forgot to mention in the description that also removing a synonym...
- 09:57 AM bug #8959: Moving a synonym to the homotypical group of the accepted taxon opens the context menu of the accepted taxon
- Now the focus is set explicitly to the moved synonym, so the context menu should be correct. please review
- 09:44 AM bug #8959 (Resolved): Moving a synonym to the homotypical group of the accepted taxon opens the context menu of the accepted taxon
- Applied in changeset commit:taxeditor|764151afe45bda26527cd591324959cae397eb70.
- 10:16 AM task #8957 (Closed): Rename "unexpected error" to "unhandled error"
- this seems to be correct.
- 10:08 AM bug #8961 (Resolved): Using the selection dialogue for nomenclatural references removes the recently used list
- please review
- 10:05 AM Revision 6a56588d (taxeditor): fix #8962: check for disposed section
- 10:05 AM bug #8962: Handle widget is disposed after closing Supplemental Data View
- please review
- 10:04 AM bug #8962 (Resolved): Handle widget is disposed after closing Supplemental Data View
- Applied in changeset commit:taxeditor|6a56588d99aa57e6da57bad3def7b9e376cc4466.
- 09:45 AM Revision 764151af (taxeditor): fix #8959: set focus to synonym after moving synonym to other homotypic group
- 09:09 AM Revision 3580c856 (taxeditor): use copy icon for clone button in name details view
04/20/2020
- 07:14 PM bug #8965 (New): Separator missing for aggregated descriptions of higher character tree nodes
- In the aggregated descriptions freetext separators are missing in front of the text belonging to character nodes of h...
- 06:33 PM bug #8857: NonUniqueObjectException when creating new taxon
- There is a very similar case which has a secundum reference and a nomenclatural reference in common (not only authors...
- 06:32 PM Revision c2724256 (taxeditor): fix #8034: calling nomenclatural ref selection dialog should not delete last selected reference list
- 06:30 PM Revision 2d440e1c (cdmlib): ref #8857 NonUniqueObjectException test for new taxon with shared reference
- 06:13 PM bug #8963: Selection dialogues should be modal
- Don't know why the shell style was set to SWT.DIALOG_TRIM. This is fixed now.
- 06:10 PM bug #8963 (Resolved): Selection dialogues should be modal
- Applied in changeset commit:taxeditor|5893c96f9e864a5206112771215a6f699ffa7977.
- 04:18 PM bug #8963: Selection dialogues should be modal
- NaK:
ich mache folgendes
- sec ref. für das akzeptierte Taxon ändern. Das Details view zeigt die neue sec. ref. ric... - 04:15 PM bug #8963 (Closed): Selection dialogues should be modal
- Currently it is possible to edit data in other parts of the TaxEditor if a selection dialogue is opened. This may lea...
- 06:10 PM Revision 5893c96f (taxeditor): fix #8963: selection dialogs should be modal
- 05:28 PM bug #8964: Improve label for homonym relationships
- ~~~ SQL
UPDATE DefinedTermBase
SET titleCache = 'is later homonym of'
WHERE uuid = '80f06f65-58e0-4209-b811-cb4... - 05:22 PM bug #8964 (In Progress): Improve label for homonym relationships
- Implemented in csv files.
Still need to implement update script for 4 Representations and 2 DefinedTermBase.titleC... - 05:19 PM bug #8964 (Closed): Improve label for homonym relationships
- WGB:
Name relationships:
is later/earlier homonym “for” => “of”
===
Needed for "is later/earlier homonym for"... - 05:20 PM Revision 469fa283 (cdmlib): ref #8964 later homonym for => of (changed in csv files)
- 03:06 PM bug #8962 (Closed): Handle widget is disposed after closing Supplemental Data View
- WGB:
nach Schließen des Supplemental Data views.
Vorher: Synonym Wormia von Ancistrocladus Fokus auf Name gesetzt.... - 02:56 PM bug #8961 (Closed): Using the selection dialogue for nomenclatural references removes the recently used list
- Selecting a nomenclatural reference for a TaxonName seems to delete the list of recently used references.
WGB:
We... - 12:25 PM feature request #8960 (New): Use explicit icon for accepted taxa being basionyms
- Accepted taxa can now be flagged as basionyms in their homotypical group. But there is no icon yet that shows that th...
- 12:16 PM bug #8959 (Closed): Moving a synonym to the homotypical group of the accepted taxon opens the context menu of the accepted taxon
- To reproduce:
* open a taxon which has a heterotypic synonym
* move this synonym to the homotypic group of the ac... - 11:04 AM bug #4299: Show error when permission is denied ...
- I think I chose this title because my concern was that permission errors are not shown in general (or at least at mul...
- 10:21 AM bug #4299: Show error when permission is denied ...
- I think we should change the subject of this issue to better reflect the details of this task.
Suggestion: *Adapt ... - 10:46 AM feature request #6335: Providing the admin email for each server installation
- I am changing the subject to avoid confusion of server installation with cdm instance
- 10:22 AM feature request #8958: Add publication year, inReference (journal), and URI to reference bulk editor
- WGB:
ich verbringe ja einen beträchtlichen Teil meiner Zeit mit dem Aufräumen von nomenklatorischen und bibliographi... - 10:22 AM feature request #8958 (Closed): Add publication year, inReference (journal), and URI to reference bulk editor
- 10:00 AM feature request #7432: Show default login only if the account has not been changed
- Andreas Müller wrote:
> Another solution could be to show the default password only if the host is localhost or if t...
04/17/2020
- 11:50 PM Revision 39c62a4a (cdmlib): cleanup
- 11:50 PM Revision 4e0742ba (cdmlib): ref #8857 adapt test for non-unique object exception
- 08:12 PM bug #8857 (In Progress): NonUniqueObjectException when creating new taxon
- I created a test for the issue: TaxonNodeServiceImplTest.testSaveNewTaxonNode()
The problem seems to be a principa... - 12:18 PM bug #8857: NonUniqueObjectException when creating new taxon
- The error occurred again:
The screenshot shows that the new taxon is using an author whic... - 08:03 PM Revision e2ac6eb9 (cdmlib): cleanup
- 08:03 PM Revision a99c387f (cdmlib): ref #8857 test for non-unique object exception
- 07:59 PM feature request #8238 (Feedback): Allow interoperability between term trees
- should we split this ticket?
- 07:58 PM feature request #7981 (Feedback): Add configuration UI for matrix description aggregation
- 05:42 PM Revision 24e1f8d3 (cdmlib): cleanup
- 05:39 PM Revision 53bbff6f (cdmlib): cleanup RedmineRegistrationMessageServiceTest.xml
- 12:45 PM Revision 0fe66ef7 (cdmlib): cleanup
- 12:06 PM Revision 3720ed7b (taxeditor): cleanup
- 12:06 PM Revision 1d255789 (taxeditor): fix #8957 Replace "Unexpected error" by "Error" in title
- 11:49 AM task #8957: Rename "unexpected error" to "unhandled error"
- I replaced now "This is an unexpected error" by "An error occurred". Please review.
- 11:48 AM task #8957 (Resolved): Rename "unexpected error" to "unhandled error"
- Applied in changeset commit:taxeditor|7b67db23d063fe89224e44874055487cdaff85b7.
- 11:35 AM task #8957: Rename "unexpected error" to "unhandled error"
- WGB:
ja, von mir aus – aber eigentlich sind das Aussagen, die nicht das USER interface sondern das developer interfa... - 11:08 AM task #8957: Rename "unexpected error" to "unhandled error"
- WGB:
„Unexpected Error“ und „This is an unexpected Error“ entbehrt nicht einer gewissen Komik, ich nehme an, die ist... - 11:07 AM task #8957 (Closed): Rename "unexpected error" to "unhandled error"
- 11:48 AM Revision 7b67db23 (taxeditor): fix #8957 Replace "This is an unexpected error" by "An error occurred"
- 11:44 AM Revision fb74fafe (taxeditor): cleanup
- 11:01 AM feature request #7432: Show default login only if the account has not been changed
- WGB:
Und im Login-Dialog stolpere ich jedes mal über die Angabe des Defaults (admin, ...) – die ist doch klar unsi... - 11:00 AM feature request #7432: Show default login only if the account has not been changed
- Another solution could be to show the default password only if the host is localhost or if the instance is "localhost...
- 12:39 AM task #2342: Open issues for DwC-A export
- Maybe still not the correct milestone but still better than the old one.
- 12:11 AM feature request #4298 (Feedback): refresh views after changing rights
- Is this still an open issue?
If yes, please let discuss which milestone to put it to, as the old milestone is closed. - 12:07 AM feature request #3095 (Feedback): protect taxa and nodes
- Please check what are the issues that are still open. Maybe split ticket afterwards into open and closed issues.
- 12:05 AM feature request #3097 (Feedback): disable editors if a user has insufficient grants for a taxon or taxon node.
- I am not sure if I understand what is meant here with "enabled".
Currently it seems possible to open a taxon but not...
04/16/2020
- 11:42 PM Revision 0ebc7378 (taxeditor): cleanup
- 11:41 PM Revision 142a6b70 (taxeditor): ref #4306 remove camel case for GrantedAuthority labels
- 11:35 PM Revision 84527493 (taxeditor): cleanup
- 06:45 PM bug #4300 (Feedback): Authority form does not work under Windows
- To me it looks like this ticket can be closed as worksforme even if the authority form is still not working very well...
- 06:40 PM bug #4299: Show error when permission is denied ...
- Also entering the New->Taxon dialog should not be possible as the dialog is fully disabled in this case anyway (but o...
- 06:37 PM bug #4299: Show error when permission is denied ...
- I move this to current milestone as we have more and more DBs with limited rights and therefore this issue becomes mo...
- 06:34 PM bug #8956 (New): Close views and editors only after successful login
- Currently open editors and views are closed even if a login as another user is not successful.
This is not necessary... - 06:25 PM bug #7844 (Closed): LoginDialog freezes Taxeditor if no connection can be established
- With the current timeouts and connection error handling this ticket seems to be fully fixed.
- 06:03 PM feature request #6429 (Feedback): Reconstruct Admin Preferences
- To me it looks like this was fixed long time ago. So we could close the ticket as worksforme remove target version. P...
- 05:59 PM feature request #6327 (Duplicate): Providing the admin email for each server instance somehow
- Andreas Kohlbecker wrote:
> Andreas Müller wrote:
> > Do we have an idea who the admin actually is?
> > Is it the ... - 03:49 PM bug #8955 (New): After saving a taxon the taxon navigator scrolls the taxon to the bottom
- NaK:
Hat man ein Taxon-Fenster geschlossen, verschiebt sich der Baum so, dass dieses Taxon ganz unten in der Ansic... - 03:34 PM bug #8954 (Closed): Details and Supplemental Data View do not save the expansion state of sections again
- The regression described in #8260 occurs again for me. Details view and supplemental data view and maybe others do no...
- 03:07 PM bug #8953 (Resolved): Focus not correctly evaluated for details view when switching between names
- NaK:
Problem mit dem Details-View. Sobald man ein Taxon geöffnet hat, und auf eines der Synonyme in der Liste klickt...
04/09/2020
- 02:02 PM task #8952 (New): Change data set to dataset
- It has been decide to use dataset and not data set as label for data sets throughout the platform.
All labels and ... - 02:00 PM bug #8951 (New): Do not show Open in ... menu in factual data view if no record is selected
- Maybe this is also relevant for other views/editors
 - 01:09 PM task #8934 (Closed): Import new FoG status data
- 01:07 PM task #8934 (Resolved): Import new FoG status data
- Applied in changeset commit:cdmlib-apps|44845558921aa07d8c89dfbeebf0ac7dab6c938d.
- 01:07 PM Revision 44845558 (cdmlib-apps): fix #8934 final changes to FoG status import
- 01:05 PM feature request #8725: Add abbreviation to namedArea text field in distribution details view
- Andreas Müller wrote:
> Andreas Müller wrote:
> > The preference should be moved from Factual Data to UI->Distribut...
04/08/2020
- 11:05 PM Revision 02741e89 (cdmlib-apps): ref #8934 changes to FoG status import
- 10:23 PM Revision 466b0811 (cdmlib-apps): ref #8886 lichenes source and destination updated
- 09:31 PM feature request #8950 (New): Allow creating new facts dataset and new fact in one step
- Adding a fact to a taxon which does not yet have facts takes time as one first needs to create a factual dataset (des...
- 07:12 PM bug #8949 (New): Open new fact in factual data view and set focus to main field in details view.
- ~~Currently when choosing creating a new fact via "new"->"feature" only the feature is shown and gets the focus in th...
- 06:24 PM bug #8815: Clean up TaxonNodeDto and UuidAndTitleCache usage in TaxonNodeService/Dao
- Andreas Kohlbecker wrote:
> Andreas Müller wrote:
> > Is this ticket fully fixed and for review?
>
> yes, I wrot... - 06:11 PM bug #8815 (Closed): Clean up TaxonNodeDto and UuidAndTitleCache usage in TaxonNodeService/Dao
- this seems to work, as there are no problems in the editor and the code looks fine as well.
- 06:02 PM bug #8815: Clean up TaxonNodeDto and UuidAndTitleCache usage in TaxonNodeService/Dao
- Andreas Müller wrote:
> Is this ticket fully fixed and for review?
yes, I wrote this already in comment 7
- 05:00 PM bug #8815 (Resolved): Clean up TaxonNodeDto and UuidAndTitleCache usage in TaxonNodeService/Dao
- Is this ticket fully fixed and for review?
- 05:57 PM feature request #8895 (Closed): Specimen page: show specimen description as continuous text
* Source link like for taxon page descriptive data texts --> see #8948
* correct handling of multiple "exact value...- 03:26 PM feature request #8895 (Feedback): Specimen page: show specimen description as continuous text
- Open issues:
* Source link like for taxon page descriptive data texts
* correct handling of multiple "exact values" - 11:50 AM feature request #8895 (Resolved): Specimen page: show specimen description as continuous text
- das war ein Problem mit dem update des Codes durch Jenkins auf dem Test Server,
jetzt ist alles up to date - 11:38 AM feature request #8895 (Feedback): Specimen page: show specimen description as continuous text
- I tried to test but on http://test.e-taxonomy.eu/dataportal/preview/caryophyllales_spp/cdm_dataportal/occurrence/426e...
- 05:55 PM feature request #8947: support multiple values of statistical value type ExactValue
- Set to critical because the current implementation only shows parts of the data which may be misleading.
- 02:59 PM feature request #8947 (New): support multiple values of statistical value type ExactValue
- ... kann eine Liste sein, also mehrere Exact Values, die dann wohl semikolon-separiert sein sollten, um Verwechslunge...
- 05:48 PM feature request #8948 (New): Specimen page: specimen description link to description details page
- the specimen description in the Specimen page should link to the description details page just like in the taxon page
- 05:02 PM feature request #7981: Add configuration UI for matrix description aggregation
- Generally this ticket is implemented I guess but there are a couple of open issues. I think we should split the ticket?
- 04:29 PM Revision 4ca9a49e (cdm-server): Merge branch 'release/5.14.0' into develop
- 04:29 PM Revision e35694af (cdm-server): jenkins merging release branch into master (strategy: theirs)
- 04:28 PM Revision 341b0c9d (cdm-server): updating poms for branch'release/5.14.0' with non-snapshot versions
- 04:13 PM Revision f73e861e (cdm-webapp): Merge branch 'release/5.14.0' into develop
- 04:13 PM Revision 41eb055c (cdm-webapp): jenkins merging release branch into master (strategy: theirs)
- 04:13 PM Revision 604af24e (cdm-webapp): updating poms for branch'release/5.14.0' with non-snapshot versions
- 04:12 PM Revision 4829e191 (cdm-webapp): jenkins bumping cdmlib.version and cdm.vaadin.version to 5.14.0
- 04:04 PM Revision 61508bfe (taxeditor): Merge branch 'release/5.14.0' into develop
- 04:04 PM Revision 7421ffa8 (taxeditor): Merge branch 'release/5.14.0'
- 03:56 PM Revision 042c419c (cdm-vaadin): Merge branch 'release/5.14.0' into develop
- 03:56 PM Revision 8230f08a (cdm-vaadin): jenkins merging release branch into master (strategy: theirs)
- 03:52 PM Revision 6310c27e (cdm-vaadin): updating poms for branch'release/5.14.0' with non-snapshot versions
- 03:52 PM Revision 66c4ff1a (cdm-vaadin): jenkins bumping cdmlib.version to 5.14.0
- 03:52 PM Revision 488b5188 (cdm-dataportal): Merge branch 'release/5.14.0' into develop
- 03:52 PM Revision 9c0bc540 (cdm-dataportal): updating poms for branch'release/5.14.0' with non-snapshot versions
- 03:51 PM Revision 8fc89126 (cdm-dataportal): release-preparation: production level css
- 03:50 PM Revision 21da8743 (cdmlib): Updating develop poms back to pre merge state
- 03:50 PM Revision 6cd79d15 (cdmlib): Merge branch 'master' into develop
- 03:50 PM Revision cb1497b9 (cdmlib): updating develop poms to master versions to avoid merge conflicts
- 03:50 PM Revision 8abacaa7 (cdmlib): Merge branch 'release/5.14.0'
- 03:29 PM Revision 3a5f7b8b (cdmlib): updating poms for branch'release/5.14.0' with non-snapshot versions
- 03:07 PM Revision 494e8c00 (cdm-webapp): jenkins bumping cdmlib.version and cdm.vaadin.version to 5.14.0-SNAPSHOT
- 03:07 PM Revision ec80aa66 (cdm-webapp): updating poms for 5.15.0-SNAPSHOT development
- 03:07 PM Revision c830e730 (cdm-webapp): jenkins bumping cdmlib.version and cdm.vaadin.version to 5.15.0-SNAPSHOT
- 03:06 PM Revision dcfa31c8 (taxeditor): Updated version in pom / project files to taxeditor version : 5.15.0-SNAPSHOT and cdmlib version : 5.15.0-SNAPSHOT
- 03:06 PM Revision 45e47c57 (taxeditor): Updated version in pom / project files to taxeditor version : 5.14.0 and cdmlib version : 5.14.0
- 03:05 PM Revision d145b098 (cdm-server): updating poms for 5.15.0-SNAPSHOT development
- 03:05 PM Revision f9d2c9a6 (cdm-dataportal): updating poms for 5.15.0-SNAPSHOT development
- 03:05 PM Revision 6d273030 (cdm-vaadin): jenkins bumping cdmlib.version to 5.14.0-SNAPSHOT
- 03:05 PM Revision 7e6ee285 (cdm-vaadin): updating poms for 5.15.0-SNAPSHOT development
- 03:05 PM Revision 84174648 (cdm-vaadin): updating poms for 5.14.0 branch with snapshot versions
- 03:04 PM Revision 095c2d01 (cdm-vaadin): jenkins bumping cdmlib.version to 5.15.0-SNAPSHOT
- 03:02 PM Revision 62a355af (cdmlib): updating poms for 5.15.0-SNAPSHOT development
- 03:02 PM Revision 4faecdd5 (cdmlib): updating poms for 5.14.0 branch with snapshot versions
- 02:44 PM bug #8905 (Closed): Description Handling in ABCD import
- This seems to work as expected now (though I still am not convinced that having the option to merge distributions if ...
- 01:17 PM bug #8905: Description Handling in ABCD import
- For testing import:
File -> Import -> Specimen -> Specimen Online -> enter "bgbm*Herbar" in text field for biocase p... - 11:32 AM bug #8905 (Feedback): Description Handling in ABCD import
- Can you please add example data (webservice, example specimen) for reviewing?
- 02:40 PM Revision b94b1aec (cdm-dataportal): ref #8945 improved support for statistical value type ExactValue
- 02:18 PM feature request #8725: Add abbreviation to namedArea text field in distribution details view
- Revision 20fd2b76 says "move also admin preference" but I can't find this preference in the admin preferences.
- 02:15 PM feature request #8725 (Feedback): Add abbreviation to namedArea text field in distribution details view
- Andreas Müller wrote:
> The preference should be moved from Factual Data to UI->Distribution Details View
Now it ... - 12:27 PM feature request #8725 (Resolved): Add abbreviation to namedArea text field in distribution details view
- Applied in changeset commit:taxeditor|4bff1cd7132b34fa100aaff28408278dc6e585a5.
- 11:23 AM feature request #8725: Add abbreviation to namedArea text field in distribution details view
- The label should be changed to Show id in vocabulary in **area** textfield.
"Areal" in German. - 11:18 AM feature request #8725 (Feedback): Add abbreviation to namedArea text field in distribution details view
- The preference should be moved from Factual Data to UI->Distribution Details View
- 02:12 PM feature request #8906 (Closed): Refactor DNA Sample details view
- Works as expected
- 12:57 PM feature request #8906 (Resolved): Refactor DNA Sample details view
- please review
- 12:56 PM feature request #8906: Refactor DNA Sample details view
- Andreas Müller wrote:
> Katja Luther wrote:
>
> > But we should create a new ticket to think about refactoring th... - 12:52 PM feature request #8906: Refactor DNA Sample details view
- Andreas Müller wrote:
> As also commented in #8910 the show determinations only for field units preference does not ... - 12:52 PM feature request #8906 (Feedback): Refactor DNA Sample details view
- Andreas Müller wrote:
> Determinations work now can we still add "Accession number" below "Barcode" as this is the d... - 12:50 PM feature request #8906 (Resolved): Refactor DNA Sample details view
- Applied in changeset commit:taxeditor|c70ef402e57300c8b5f597afbb6a747ce78ccd3c.
- 11:30 AM feature request #8906: Refactor DNA Sample details view
- As also commented in #8910 the show determinations only for field units preference does not yet work for the new DNA ...
- 11:24 AM feature request #8906 (Feedback): Refactor DNA Sample details view
- Determinations work now can we still add "Accession number" below "Barcode" as this is the default id field for impor...
- 09:50 AM feature request #8906: Refactor DNA Sample details view
- For reviewing: is there anything else that is new or changed in the DNA details view beside determinations?
- 09:48 AM feature request #8906: Refactor DNA Sample details view
- Katja Luther wrote:
> But we should create a new ticket to think about refactoring the details view of specimen in... - 02:02 PM bug #8910 (Closed): Correct handling of preference for determinations
- Andreas Müller wrote:
> This works now but only for the "new" determinations in DNA Details View it does not yet wor... - 11:29 AM bug #8910: Correct handling of preference for determinations
- This works now but only for the "new" determinations in DNA Details View it does not yet work.
- 11:28 AM bug #8910 (Feedback): Correct handling of preference for determinations
- Katja Luther wrote:
> the problems are solved, they where caused by an empty combo box
Yes the above problem is s... - 09:14 AM bug #8910 (Resolved): Correct handling of preference for determinations
- the problems are solved, they where caused by an empty combo box
- 02:00 PM bug #8552 (Closed): Avoid DB call for matrix state DB preferences
- 12:55 PM bug #8946 (New): Refactor DerivedUnit Details view
- For all details views for the derived unit a derived unit facade is created, but depending on the selection providing...
- 12:53 PM feature request #8945 (Resolved): support statistical value type ExactValue (29736701-58c4-48b3-a9d7-41c74140cac7)
- this is solved now, even if in a preliminar way.
- 12:02 PM feature request #8945: support statistical value type ExactValue (29736701-58c4-48b3-a9d7-41c74140cac7)
- needs to be fixed for 5.13 as the error is visible in the portal even with specimen
descriptions as running text - 11:02 AM feature request #8945 (Resolved): support statistical value type ExactValue (29736701-58c4-48b3-a9d7-41c74140cac7)
- Unsupported statistical value type: 29736701-58c4-48b3-a9d7-41c74140cac7
Should be quick to fix!!!!
e.g.: http:... - 12:52 PM Revision a82a476a (cdm-dataportal): ref #8945 preliminar support for statistical value type ExactValue
- 12:51 PM Revision 20fd2b76 (taxeditor): fix #8725: move also admin preference
- 12:46 PM Revision c70ef402 (taxeditor): fix #8906: show determinations only if preference allow it
- 12:27 PM Revision 4bff1cd7 (taxeditor): fix #8725: move preference
- 11:08 AM Revision d2a769df (cdmlib): Revert "fix #8932 configuring swagger to support overloaded controller methods"
- This reverts commit c916a82aeea2d702daa12cd607f5bd5acc25a57f.
- 11:06 AM bug #8932 (In Progress): Swagger does not distinguish overloaded controller endpoints
- `enableUrlTemplating(true)` causes problems with swagger-ui.
we need to switch to a swagger ui version which suppo... - 10:41 AM bug #8428 (Closed): NPE in ClassificationServiceImpl.loadTreeBranchToTaxon()
- The NPE is no longer reproducible:
http://test.e-taxonomy.eu/cdmserver/euromed/portal/classification/314a68f9-8449... - 10:36 AM feature request #980 (New): Links to relevant external website(s) in taxon pages
- 09:26 AM Revision cc10a813 (taxeditor): fix #8910: fix NPE in empty Combo box
- 07:44 AM bug #8944: Handle org.springframework.security.authentication.DisabledException explicitely
- I changed the subject to describe the task closer - hope this is in your sense Andreas.
- 07:39 AM bug #8911 (Closed): LazyInitializationException (LIE) in portal/description/{uuid}
- there are no other suspect spots.
04/07/2020
- 11:48 PM feature request #8906: Refactor DNA Sample details view
- See #8910#note-5 for a possible regression
- 11:47 PM bug #8910 (Feedback): Correct handling of preference for determinations
- I get an exception when choosing an ordinary specimen (derived unit) in specimen tree editor
~~~
last remote meth... - 11:21 PM Revision b2ef3733 (taxeditor): cleanup
- 06:44 PM bug #8911: LazyInitializationException (LIE) in portal/description/{uuid}
- Andreas Müller wrote:
> The above link already works on production. Has this issue been hotfixed already?
upps, n... - 06:35 PM bug #8911 (Feedback): LazyInitializationException (LIE) in portal/description/{uuid}
- The above link already works on production. Has this issue been hotfixed already?
- 06:41 PM Revision c181cf34 (cdmlib): cleanup
- 06:38 PM Revision a4215a6f (cdmlib): cleanup
- 06:32 PM bug #8913 (Closed): InInVoc not showing up anymore in TermEditor
- Works as expected
- 06:21 PM bug #8904 (Closed): Show "cloned" icon in factual data view
- Works as expected
- 06:15 PM bug #8917 (Closed): NPE when opening Acacia in Name bulk editor (from search)
- works as expected
- 06:06 PM Revision 0f7a4af3 (taxeditor): cleanup
- 06:01 PM feature request #8926 (Closed): Remove 'expired' flags in users details
- correct
- 05:58 PM bug #8944 (New): Handle org.springframework.security.authentication.DisabledException explicitely
- If one tries to login as an disabled user an "unexpected error" is thrown.
But a disabled user should not be an un... - 05:53 PM bug #8938 (Closed): ProposalProvider in NameRelationshiptype combo does not work as expected
- Seems to work as expected
- 05:50 PM bug #8943 (Closed): Term Preferences are not correctly handled in combo boxes
- Seems to work
- 03:43 PM bug #8943: Term Preferences are not correctly handled in combo boxes
- now the handling of term preferences should work like expected.Please review.
- 03:39 PM bug #8943 (Resolved): Term Preferences are not correctly handled in combo boxes
- Applied in changeset commit:taxeditor|33c10482605414dedddd643befbdff7559897b9e.
- 03:38 PM bug #8943 (Closed): Term Preferences are not correctly handled in combo boxes
- mail WB:
Hallo,
ich hatte mich da schon vor einiger Zeit dran versucht, war aber wieder abgekommen: Wie kann man ... - 05:41 PM bug #8942 (Closed): Exception when try to get text of TextualTypeDesignation with language which is not available
- Correct
- 05:35 PM bug #8940 (Closed): The export wizard does not remember last selected folder
- Seems to work as expected
- 05:29 PM bug #8939: Exception when opening Distribution Editor because of missing Preference
- But handling of defaults (as implemented for most other preferences) is still not missing. This is mentioned in #8047...
- 05:18 PM bug #8939 (Closed): Exception when opening Distribution Editor because of missing Preference
- Seems to work as expected
- 05:11 PM Revision 88d335c7 (taxeditor): cleanup
- 03:40 PM Revision 33c10482 (taxeditor): fix #8943: fix handling of term preferences in combo boxes and code cleaning
04/06/2020
- 12:15 PM bug #8942: Exception when try to get text of TextualTypeDesignation with language which is not available
- please review.
- 12:14 PM bug #8942 (Resolved): Exception when try to get text of TextualTypeDesignation with language which is not available
- Applied in changeset commit:cdmlib|a2bd245128ad90fe14d5790ef26ef031176522a5.
- 12:09 PM bug #8942 (Closed): Exception when try to get text of TextualTypeDesignation with language which is not available
~~~
java.lang.NullPointerException
at eu.etaxonomy.cdm.model.name.TextualTypeDesignation.getText(TextualTypeDe...- 12:14 PM Revision a2bd2451 (cdmlib): fix #8942: fix NPE for not existing language
- 11:30 AM bug #8941: Exception when opening taxon from taxonnavigator by double click
- this exception is caused in the eclipse method showPart, maybe the part is not available.
- 11:28 AM bug #8941 (New): Exception when opening taxon from taxonnavigator by double click
mail WB:
Hallo,
parallel läuft ein Export, vielleicht zu viel auf einmal?
Passieren tut anschließend nichts.
H...- 10:50 AM bug #8939: Exception when opening Distribution Editor because of missing Preference
- please review
- 10:13 AM bug #8939 (Resolved): Exception when opening Distribution Editor because of missing Preference
- Applied in changeset commit:taxeditor|c6df97c52c7252b0fdd708029155ddfca164ffaf.
- 09:49 AM bug #8939 (In Progress): Exception when opening Distribution Editor because of missing Preference
- 09:48 AM bug #8939 (Closed): Exception when opening Distribution Editor because of missing Preference
- Dear Andreas,
I would like to report an error, when I try "Opening in..." "Distribution editor", I get the message... - 10:49 AM bug #8940: The export wizard does not remember last selected folder
- please review
- 10:48 AM bug #8940 (Resolved): The export wizard does not remember last selected folder
- Applied in changeset commit:taxeditor|7e48c2ec9b8eb389cc9659c4f62621c9b078dd68.
- 10:47 AM bug #8940 (Closed): The export wizard does not remember last selected folder
- When opening the export wizard the last selected export folder was shown in the text field, this is not the case anym...
- 10:49 AM Revision 7e48c2ec (taxeditor): fix #8940: the last selected folder of export wizard correctly handled as local preference
- 10:25 AM Revision 2f693358 (taxeditor): code cleaning
- 10:14 AM Revision c6df97c5 (taxeditor): fix #8939: fix getIntValue for preference with no db and no local preference
- 10:06 AM feature request #8931: Taxeditor supports https
- There are no problems connecting the production server api.cybertaxonomy.org:443
So the problem above seems rather... - 09:23 AM feature request #8931: Taxeditor supports https
- Atlassian provides detaild information on this problem at https://confluence.atlassian.com/kb/unable-to-connect-to-ss...
- 08:29 AM feature request #8931: Taxeditor supports https
- Connecting the test server (test.e-taxonomy.eu) via https fails with:
~~~
....
Caused by: sun.security.validator... - 09:38 AM bug #8938: ProposalProvider in NameRelationshiptype combo does not work as expected
- please review
- 09:27 AM bug #8938 (Resolved): ProposalProvider in NameRelationshiptype combo does not work as expected
- Applied in changeset commit:taxeditor|e2561ea7d4c417afe58d8bebf60c28146abb3f1c.
- 09:13 AM bug #8938 (Closed): ProposalProvider in NameRelationshiptype combo does not work as expected
- The ProposalProvider does not set the selection for the combo element, therefore the finish button is not enabled.
- 09:28 AM Revision e2561ea7 (taxeditor): fix #8938: fix proposal provider in namerelationshiptype combo
- 08:43 AM feature request #8926 (Resolved): Remove 'expired' flags in users details
- 08:25 AM Revision 70fa5baf (taxeditor): ref #8931 using https for port 443
04/05/2020
- 08:22 AM Revision 427f72de (cdmlib): ref #8934 adapt Feature and Taxon for FoG status import
- 08:22 AM Revision 1ff45f55 (cdmlib): cleanup
- 08:19 AM Revision 022b6478 (cdmlib-apps): Merge branch 'master' of ssh://dev.e-taxonomy.eu/var/git/cdmlib-apps
- 08:18 AM Revision 03502975 (cdmlib-apps): ref #8886 minor fix for lichenes genera import
- 08:17 AM Revision abb5d466 (cdmlib-apps): ref #8934 implement FoG status import
- 08:16 AM Revision b180267e (cdmlib-apps): cleanup
04/03/2020
- 04:00 PM bug #8937 (New): Missing synonymy for certain synonymy tab state in portal configuration
- If "Tabbed taxon page" is switched off while "Synonymy as tab" is switched on the tab is remembered as switched on:
... - 03:29 PM bug #8936 (Closed): Improve default distribution formatting
- Currently the default is
* Level 0-Label suffix: ":"
* Level 1-Item group prefix: ","
This result in Text like... - 02:29 PM bug #8935: Specimen Table: improved and more complete details row for character data
- Hallo,
"... Ich denke es gibt auch keinen Grund nur die Daten der PreferredSpecimen bzw. der Derivate anzuze... - 02:29 PM bug #8935: Specimen Table: improved and more complete details row for character data
- Hallo,
vielen Dank für die Info, da hatte ich mir wohl einiges falsch gemerkt.
Wenn ich es richtig ve... - 02:28 PM bug #8935: Specimen Table: improved and more complete details row for character data
- Hallo,
ein gutes Beispiel ist Campanula aucheri im Campanula-Portal:
http://campanula.e-taxonomy.net/... - 02:28 PM bug #8935 (New): Specimen Table: improved and more complete details row for character data
**TODO:**
* show all units (FieldUnit + all Derived Units) by the short label
* if a unit has more than one s...- 02:24 PM feature request #4383: multiple issues with de-duplication of references in bibliography
- another case of failing deduplication:
http://portal.cybertaxonomy.org/flora-de-la-republica-de-cuba/cdm_dataporta... - 12:59 PM task #8934 (Closed): Import new FoG status data
- 12:42 PM bug #8916 (Closed): ConcurrentModificationException in CdmFormFactory.destroyElement()
- I could not reproduce the exception anymore and the solution seems to be correct.
- 12:21 PM bug #8916: ConcurrentModificationException in CdmFormFactory.destroyElement()
- The above fix can not work because the remove is not called on the iterator. I changed the code in a way that a tempo...
- 12:41 PM task #8928: Swap menu entries for specimen bulk editors
- Andreas Müller wrote:
> Katja Luther wrote:
> > Andreas Müller wrote:
> > > This I expect to be a no-brainer there... - 12:40 PM task #8928: Swap menu entries for specimen bulk editors
- Katja Luther wrote:
> Andreas Müller wrote:
> > This I expect to be a no-brainer therefore I moved it to 5.14. If n... - 11:12 AM task #8928: Swap menu entries for specimen bulk editors
- Andreas Müller wrote:
> This I expect to be a no-brainer therefore I moved it to 5.14. If not please move further.
... - 12:35 PM feature request #8725: Add abbreviation to namedArea text field in distribution details view
- please review
- 12:32 PM feature request #8725 (Resolved): Add abbreviation to namedArea text field in distribution details view
- Applied in changeset commit:taxeditor|de0fd82683fcaa892d6e6b55457d2088f9c31315.
- 12:32 PM Revision de0fd826 (taxeditor): fix #8725: show IDinVoc in NamedArea Textfield, add preference to make it configurable
- 12:32 PM Revision c59a038a (cdmlib): ref #8725: add preferencePredicate for showIdInVoc in textfield
- 12:27 PM task #8886 (Closed): Import Lichenes Genera
- Generally this is fixed. Details will be discussed via Mail.
- 12:26 PM bug #8918 (Closed): Add "set as basionym" to accepted taxon
- Seems to work as expected
- 12:24 PM bug #8919 (Closed): Shorten label for "Reference Detail"
- fixed and looks better as there is more space for the reference title now
- 12:18 PM Revision 9bc35d79 (taxeditor): ref #8916 try to fix ConcurrentModificationException by using temporary set
- 12:04 PM bug #8933: Registration UI: Views must not persist empty annotations
- We should also cleanup data once this is fixed.
- 11:45 AM bug #8933 (New): Registration UI: Views must not persist empty annotations
- ich sehe gerade, dass es in Phycobank jede Menge leere Annotations gibt, also welche bei denen der Text leer ist. Das...
- 11:46 AM bug #8932 (Closed): Swagger does not distinguish overloaded controller endpoints
- fixed
- 11:46 AM bug #8932 (Resolved): Swagger does not distinguish overloaded controller endpoints
- Applied in changeset commit:cdmlib|c916a82aeea2d702daa12cd607f5bd5acc25a57f.
- 11:36 AM bug #8932 (In Progress): Swagger does not distinguish overloaded controller endpoints
- the BaseListController defines three mappings for /{type}/
* doList(Integer, Integer, Class<T>, HttpServletRequest... - 11:46 AM Revision 14af18d0 (taxeditor): cleanup
- 11:46 AM Revision c916a82a (cdmlib): fix #8932 configuring swagger to support overloaded controller methods
- 10:59 AM bug #8927 (Closed): Fix isAdmin() method in LoginManager
- 10:53 AM feature request #8930: Taxon navigator should show icon if a taxon is unpublished
- mail WB:
In diesem Zusammenhang wollte ich auch anregen, die als doubtful markierten Taxa auch im Navigator mit de... - 10:17 AM feature request #8930 (New): Taxon navigator should show icon if a taxon is unpublished
- To avoid that someone accidentally switches the publish flag of and generally to immediately now that a taxon is not ...
- 10:53 AM Revision c2530585 (cdmlib): ref ref #8815 adding condition which was lost during conflict resolution
- 10:51 AM Revision ad8a2564 (taxeditor): adding workbench.xmi to ignored files
- 10:36 AM feature request #8931 (Closed): Taxeditor supports https
- The Taxeditor seems not able to connect cdm instances via https.
With this configuration:
~~~json
{
"name" ... - 09:12 AM bug #8925 (Closed): Users with ROLE_USER_MANAGER must be able to change any user password
- added the userHelper() method, so the ticket can be closed.
- 09:11 AM bug #8925 (Resolved): Users with ROLE_USER_MANAGER must be able to change any user password
- Applied in changeset commit:taxeditor|b43aa78568358b5022da911216fe5013783256b1.
- 09:12 AM Revision b43aa785 (taxeditor): fix #8925: add userHelper() method to avoid redundancy
04/02/2020
- 11:43 PM feature request #8929 (New): Add "open folder" button to file/folder based exports
- e.g. for DwC-A export and CDMLight but maybe also for other exports.
The button should appear on the result dialo... - 11:24 PM task #8928: Swap menu entries for specimen bulk editors
- This I expect to be a no-brainer therefore I moved it to 5.14. If not please move further.
- 11:23 PM task #8928 (Closed): Swap menu entries for specimen bulk editors
- AM:
Können wir die Specimen-Einträge im Bulk-Editor Menü tauschen. Ich denke Specimen(Tree) ist der bei weitem meh... - 11:16 PM feature request #8891 (Closed): Add categorical and quantiative data to DwC-A
- Constantia (FoG) tested the new implementation and told me it worked as expected for her. So I close this ticket as t...
- 04:45 PM bug #8925 (Feedback): Users with ROLE_USER_MANAGER must be able to change any user password
- I tested the functionality and this works now as expected. So this ticket can be closed apart from the above suggestion.
- 04:31 PM bug #8925: Users with ROLE_USER_MANAGER must be able to change any user password
- please create an access method like:
~~~java
private UserHelper userHelper() {
if (userHelper == null){... - 03:38 PM bug #8925: Users with ROLE_USER_MANAGER must be able to change any user password
- please review
- 12:05 PM bug #8925 (Resolved): Users with ROLE_USER_MANAGER must be able to change any user password
- Applied in changeset commit:taxeditor|bfedf5f3d8e57c764333f355c09444dee9292ab5.
- 10:53 AM bug #8925 (Closed): Users with ROLE_USER_MANAGER must be able to change any user password
- For users with ROLE_USER_MANAGER the button in the User details view to change a users password must be generally ena...
- 04:15 PM bug #8815: Clean up TaxonNodeDto and UuidAndTitleCache usage in TaxonNodeService/Dao
- Hi Katja, I reverted the return types again from UuidAndTitleCache to TaxonNodeDto
Please review. - 04:14 PM Revision 925237ad (cdmlib): ref #8815 reverting return types from UuidAndTitleCache to TaxonNodeDto
- 04:14 PM Revision 05daad66 (cdmlib): Revert "ref #8815: add UuidAndTitleCache methods again in taxonnodeservice"
- This reverts commit 47c1bab5d954d21e17653072c211a7ae53e53e97 + 75e3aef5f2a567e2833c03f13194b062a5d58947
Resolved Con... - 04:14 PM Revision 4a186e0a (cdmlib): ref #6113 adding dependency to KML types
- 04:12 PM task #8834 (Closed): use TaxonNodeDto instead of UuidAndTitleCache
- done.
- 04:11 PM Revision 0d7a94de (cdm-vaadin): ref #8834 UuidAndtitleCache replaced by TaxonNodeDto
- 02:57 PM Revision 7c6f3c4d (cdmlib-apps): fix #8886 minor changes to lichenes genera import
- 02:46 PM Revision e35a72c0 (cdmlib-apps): cleanup poms in cdmlib-app
- 02:44 PM task #8886 (Resolved): Import Lichenes Genera
- Applied in changeset commit:cdmlib-apps|1773366920844ffb75b8ef5a21e2e8e778d0e107.
- 02:40 PM Revision 17733669 (cdmlib-apps): fix #8886 finalize lichenes genera import
- 01:28 PM Revision 1e61fa5c (taxeditor): fix #8925: activate user and usergroup menu for userManager
- 01:04 PM Revision 21a9887f (cdmlib): cleanup
- 01:04 PM Revision 2f705779 (cdmlib): ref #8886 add Fungi to NonViralNameParserImpl
- 01:04 PM Revision ac56518d (cdmlib): remove redundant factory code in User
- 12:06 PM Revision bfedf5f3 (taxeditor): fix #8925: and fix #8927 use role_admin for check whether user is admin and check for user_manager for right to edit pwd
- 12:05 PM bug #8927 (Resolved): Fix isAdmin() method in LoginManager
- Applied in changeset commit:taxeditor|bfedf5f3d8e57c764333f355c09444dee9292ab5.
- 12:03 PM bug #8927 (Closed): Fix isAdmin() method in LoginManager
- The isAdmin() method uses only the name of the user to check whether the user is admin or not, but should use the rol...
- 11:01 AM feature request #8926 (Closed): Remove 'expired' flags in users details
- The fields 'Account Non Expired', 'Account locked', 'Credentials non Expired' are not used yet, so they should not be...
- 10:47 AM Revision f743c072 (taxeditor): make all expired flags for users invisible
- 09:38 AM bug #8916: ConcurrentModificationException in CdmFormFactory.destroyElement()
- Avoid the ConcurrentModificationException by using an iterator for iterating over the elements of a set to destroy th...
- 09:22 AM bug #8916 (Resolved): ConcurrentModificationException in CdmFormFactory.destroyElement()
- Applied in changeset commit:taxeditor|002ea91bea2170b2f7307f8c7bf791e7c6ab28e0.
- 09:37 AM Revision c2286033 (taxeditor): fix #8916: avoid concurrent modification exception
- 09:22 AM Revision 002ea91b (taxeditor): fix #8916: avoid concurrent modification exception
04/01/2020
- 03:19 PM Revision 44f44469 (cdm-dataportal): commenting dead code
- 03:13 PM feature request #8895: Specimen page: show specimen description as continuous text
- Andreas Müller wrote:
> Is there a link on test for reviewing? Then maybe also Norbert can have a look if it looks a... - 03:01 PM feature request #8895 (Resolved): Specimen page: show specimen description as continuous text
- Is there a link on test for reviewing? Then maybe also Norbert can have a look if it looks as expected.
- 02:39 PM feature request #8895 (Closed): Specimen page: show specimen description as continuous text
- done
- 02:39 PM feature request #8895 (Resolved): Specimen page: show specimen description as continuous text
- Applied in changeset commit:cdm-dataportal|2527a83cee421e06ea133960964442d2fd19905a.
- 02:05 PM feature request #8895 (In Progress): Specimen page: show specimen description as continuous text
- 02:50 PM bug #8923 (Duplicate): NullPointerException (NPE) after attempt to save invalid Group name
- This duplicates #7699
- 02:11 PM bug #8923: NullPointerException (NPE) after attempt to save invalid Group name
- Is this easy to fix? Otherwise move to next milestone.
- 12:50 PM bug #8923 (Duplicate): NullPointerException (NPE) after attempt to save invalid Group name
- Group editor:
* Change exiting Group name to invalid name (add whitespace character)
* Save --> Error due to in... - 02:38 PM Revision 2527a83c (cdm-dataportal): fix #8895 fix showing specimen descriptions as running text
- 02:36 PM Revision 26149ae1 (cdm-dataportal): fix showing specimen descriptions as running text
- 01:55 PM Revision f6524e30 (taxeditor): fix #8904: show copy icon as clone icon in factual data view
- 01:55 PM bug #8904 (Resolved): Show "cloned" icon in factual data view
- Applied in changeset commit:taxeditor|f6524e305046c69ff209143af2c4a12d36bad975.
- 01:52 PM feature request #8471: Computed descriptions should be disabled in TaxEditor
- I did some research but it seems to be a little bit more complex because this needs to be implemented by a mouseListe...
- 01:30 PM bug #7376: doubtful taxa not easy to find
- Vielleicht sollten wir überlegen ob die hier verwendete Suche tatsächlich die Richtige ist. Vermutlich wird hier doch...
- 01:23 PM bug #8924 (New): Select dialog for GrantedAuthorities is unusable with many GAs in the DB
- In the phycobank db the select dialog for GrantedAuthorities completely blocks the whole editor.
- 11:40 AM Revision 21938b11 (taxeditor): fix #8906: adapt dnaSample details view creation to other derived units
- 11:39 AM feature request #8906: Refactor DNA Sample details view
- Applied in changeset commit:taxeditor|21938b114f742509677d4d883f91f0883dc70683.
- 11:34 AM feature request #8906 (Resolved): Refactor DNA Sample details view
- Now, the dna sample details view is handled analogue to the other derived units. So the determination can be shown, n...
- 11:14 AM bug #8428 (Resolved): NPE in ClassificationServiceImpl.loadTreeBranchToTaxon()
- Applied in changeset commit:cdmlib|380b0e353b61b451d378c7d4341c111a11534c32.
- 11:13 AM bug #8428: NPE in ClassificationServiceImpl.loadTreeBranchToTaxon()
- observed again :
~~~
[algaterra] 2020-03-29 10:00:50,924 INFO [qtp1018547642-5078] [eu.etaxonomy.cdm.remote.contr... - 11:14 AM Revision 380b0e35 (cdmlib): fix #8428 avoiding NPE
- 10:57 AM task #8379: Review strange specimen implementations
- Andreas Müller wrote:
> I think we decided to move this issue to AK. Please correct me if wrong.
Yes, exactly. Bu... - 10:47 AM task #8379: Review strange specimen implementations
- I think we decided to move this issue to AK. Please correct me if wrong.
Please also decide which milestone it sho...
03/31/2020
- 03:22 PM feature request #8922 (Duplicate): Make setting of sec-Reference configurable when moving synonyms.
- Currently the sec ref is automatically taken from the new accepted taxon when moving (or adding) a synonym. This is n...
- 11:25 AM bug #8917: NPE when opening Acacia in Name bulk editor (from search)
- this should be fixed, please review
- 11:24 AM bug #8917 (Resolved): NPE when opening Acacia in Name bulk editor (from search)
- Applied in changeset commit:taxeditor|163a48b01b39469cfa576645eacc98e303b9f9eb.
- 11:25 AM Revision 163a48b0 (taxeditor): fix #8917: fix open_in Bulkeditor
- 11:10 AM bug #8905 (Resolved): Description Handling in ABCD import
- 08:51 AM bug #8905: Description Handling in ABCD import
- Andreas Müller wrote:
> Katja Luther wrote:
> > The description handling is fixed now, but another problem is the t... - 08:49 AM bug #8905: Description Handling in ABCD import
- Katja Luther wrote:
> The description handling is fixed now, but another problem is the titlecache creation. After a... - 08:40 AM bug #8905: Description Handling in ABCD import
- The description handling is fixed now, but another problem is the titlecache creation. After adding a new source to t...
- 11:04 AM bug #8918: Add "set as basionym" to accepted taxon
- please review
- 11:03 AM bug #8918 (Resolved): Add "set as basionym" to accepted taxon
- Applied in changeset commit:taxeditor|2bef172d75871c83d777b56b7bc5d552f4fcea2e.
- 08:55 AM bug #8918: Add "set as basionym" to accepted taxon
- If not easy to implement please move to other milestone.
- 08:54 AM bug #8918 (Closed): Add "set as basionym" to accepted taxon
- WGB:
eine kleine Verbesserungsmöglichkeit: Bei den Synonymen der heterotypischen Gruppen kann man im NameEditor (ü... - 11:04 AM Revision 2bef172d (taxeditor): fix #8918: setBasionym also for accepted taxon
- 09:20 AM Revision efd5530a (taxeditor): fix #8919: shorten reference detail label
- 09:19 AM bug #8919 (Resolved): Shorten label for "Reference Detail"
- Applied in changeset commit:taxeditor|efd5530a08f475114b948ccc86cd76742ef62096.
- 08:58 AM bug #8919 (Closed): Shorten label for "Reference Detail"
- Use "Ref. Detail" instead.
In Details View for nom. ref. - 09:19 AM bug #8921 (New): Set sec for subtree not always successful
- WGB:
ich glaube, ich hatte gerade wieder den Fall, den ich schon letzte Woche bemerkt hatte.
Ich habe (in Caryoph... - 09:08 AM feature request #8920 (New): Make reference URL available in details view
- e.g. by having a button to open it or by having the label clickable and blue if an URL exists.
Note: in future the... - 08:42 AM Revision 78bba475 (cdmlib): ref #8905: fix description handling in specimen imports
03/30/2020
- 04:21 PM Revision f84a4e81 (cdmlib): ref #8907 adapting method to SortableTaxonNodeQueryResult - adding test
- 04:06 PM Revision 5db2ebcd (cdmlib): ref #8907 adapting method to SortableTaxonNodeQueryResult and fixing NPE
- 03:12 PM bug #8917: NPE when opening Acacia in Name bulk editor (from search)
- Please delete the orphaned name after fixing this ticket.
- 03:06 PM bug #8917 (Closed): NPE when opening Acacia in Name bulk editor (from search)
- in FoG.
* Search for Acacia ( in FoG)
* Open the pure name (orphaned name) via context menu -> bulk editor
* =>... - 01:27 PM bug #8899 (Closed): NullPointerException (NPE) in ManifestController
- solved and tested at the example given in the description
- 01:26 PM bug #8899 (Resolved): NullPointerException (NPE) in ManifestController
- Applied in changeset commit:cdmlib|9fc7d8affc2e6c2bc83bc86dac76eec14ce5d8a3.
- 01:26 PM Revision 9fc7d8af (cdmlib): fix #8899 fixing 4 NPEs in ManifestController
- 12:31 PM Revision 3c9af367 (cdmlib): ref #8907 adding missing constructor to hql query
- 11:55 AM bug #8916: ConcurrentModificationException in CdmFormFactory.destroyElement()
- mail WB:
Hallo,
nach Save nach Ändern der sec.-Ref. im Details-View.
HG
W
~~~
last remote method : http:/... - 11:54 AM bug #8916: ConcurrentModificationException in CdmFormFactory.destroyElement()
- mail WB:
Hallo,
entfernen der Doubtful-Flag im Details View, Save -> Fehler
HG
W
~~~
last remote method : h... - 11:53 AM bug #8916 (In Progress): ConcurrentModificationException in CdmFormFactory.destroyElement()
- While updating the views sometimes a ConcurrentModificationException appears while AbstractCdmDataViewerE4.destroySec...
- 11:39 AM bug #8857: NonUniqueObjectException when creating new taxon
- another time:
mail WB:
Hallo,
beim Erstellen eines neuen Taxon aus dem Navigator heraus.
HG
W
~~~ text
...
03/29/2020
- 08:22 AM Revision a77d57ae (cdmlib-apps): cleanup
- 08:20 AM Revision 6e5a5397 (cdmlib-apps): ref #8886 first not yet compiling version of Lichenes import
03/27/2020
- 07:17 PM bug #8915 (Duplicate): ID in Vocabulary is not shown in term editor
- 07:15 PM bug #8915 (Duplicate): ID in Vocabulary is not shown in term editor
- The ID in VOcabulary is not shown anymore in the label of the term editor, also if the preference is set to "Show ID ...
- 05:57 PM bug #8914 (Closed): jetty 9.4.x returns error states as json which are parsed and processes by cdm_dataportal
- 05:38 PM bug #8914 (Resolved): jetty 9.4.x returns error states as json which are parsed and processes by cdm_dataportal
- Applied in changeset commit:cdm-dataportal|4e5b23aeacdb46064b71a6f76354862ff61223ee.
- 05:32 PM bug #8914: jetty 9.4.x returns error states as json which are parsed and processes by cdm_dataportal
- the original issue subject was a misinterpretation of the symptoms, the real cause is different - will change the tic...
- 05:11 PM bug #8914 (Closed): jetty 9.4.x returns error states as json which are parsed and processes by cdm_dataportal
- jetty 9.4.x returns error states as json which are parsed and processes by cdm_dataportal completely breaks with the ...
- 05:42 PM Revision 159d2dd8 (cdm-dataportal): Merge tag '5.13.1' into develop
- tagging 5.13.1
- 05:42 PM Revision 17e22c80 (cdm-dataportal): Merge branch 'hotfix/5.13.1'
- 05:41 PM Revision 3e88c44c (cdm-dataportal): fix #8914 replacing parsed jetty error responses by null (also ref #2711)
- 05:38 PM Revision 4e5b23ae (cdm-dataportal): fix #8914 replacing parsed jetty error responses by null (also ref #2711)
- 05:20 PM Revision 0ee7ae82 (cdmlib): cleanup
- 04:53 PM Revision 01ff0c5e (cdmlib): cleanup
- 04:46 PM Revision 68acc871 (cdmlib): cleanup and remove ITitleDao.findByTitleAndClass(xxx) (2)
- 04:36 PM bug #8911: LazyInitializationException (LIE) in portal/description/{uuid}
- please review
- 04:23 PM bug #8911 (Resolved): LazyInitializationException (LIE) in portal/description/{uuid}
- Applied in changeset commit:cdmlib|f4bffe1d71350100bb634d183424a441c3777530.
- 10:46 AM bug #8911 (Closed): LazyInitializationException (LIE) in portal/description/{uuid}
- http://api.cybertaxonomy.org/caryophyllales_spp/portal/description/f4fc4b11-90c7-4a02-b236-2d58f5891e6e.json
~~~
... - 04:24 PM Revision 6ade84be (cdmlib): cleanup and remove ITitleDao.findByTitleAndClass(xxx)
- 04:23 PM Revision f4bffe1d (cdmlib): fix #8911 fixing initstrategy for Taxon Descriptions
- 04:09 PM Revision 243e8f68 (cdmlib): cleanup
- 04:02 PM Revision 51132c21 (cdmlib): cleanup
- 03:47 PM bug #8536 (Duplicate): Connect Dialog: UI elements exceed the available space
- 03:46 PM bug #7189: Taxeditor connect dialog high-dpi suport
- The same probelm exists in windows 10:
(*Windows 10 at text size 150%*) - 03:30 PM bug #8913 (Resolved): InInVoc not showing up anymore in TermEditor
- 03:29 PM bug #8913 (Closed): InInVoc not showing up anymore in TermEditor
- ... even if local preference for Term Editor is set to "show vocabulary id"
- 03:27 PM Revision 74b13aca (cdm-vaadin): adapting to moved ReferenceEllypsisFormatter
- 12:11 PM Revision 7f063f2e (taxeditor): fix term label provider for term editor
- 12:08 PM bug #8548 (Closed): ReferenceEditor: Layout problem when opening Reference editor (new journal, new book, new thesis)
- Reviewed in the released production system. No problems. Set the ticket to closed.
- 11:34 AM Revision c6a73aed (cdmlib): fix correct handling of description configuration
- 11:09 AM Revision 41ad665a (cdmlib): moving ReferenceEllypsisFormatter to package eu.etaxonomy.cdm.format.reference
- 10:43 AM feature request #8906: Refactor DNA Sample details view
- Andreas Müller wrote:
> Katja Luther wrote:
> > Andreas Müller wrote:
> > > By the way the derivedUnitFacace was o... - 09:37 AM feature request #8906: Refactor DNA Sample details view
- Katja Luther wrote:
> Andreas Müller wrote:
> > By the way the derivedUnitFacace was originally meant to work with ... - 09:25 AM feature request #8906: Refactor DNA Sample details view
- Andreas Müller wrote:
> By the way the derivedUnitFacace was originally meant to work with the Specimen list editor.... - 10:21 AM bug #8910: Correct handling of preference for determinations
- Andreas Müller wrote:
> AM:
>
> Wie soll denn jetzt die genaue Semantik sein? Ich würde ja vom Namen her denken, ... - 10:11 AM bug #8910: Correct handling of preference for determinations
- AM:
Wie soll denn jetzt die genaue Semantik sein? Ich würde ja vom Namen her denken, dass die Determinations für F... - 10:10 AM bug #8910 (Resolved): Correct handling of preference for determinations
- 10:06 AM bug #8910 (Closed): Correct handling of preference for determinations
- 09:37 AM Revision 10c5f268 (taxeditor): correct handling of pref determinations only for field units
03/26/2020
- 05:19 PM task #8907 (Resolved): replace UuidAndTitleCacheTaxonComparator by type save implementation
- ticket completed.
- 11:31 AM task #8907 (Resolved): replace UuidAndTitleCacheTaxonComparator by type save implementation
- copied from #8892:
`UuidAndTitleCacheTaxonComparator` is used by different methods which pass Object array with d... - 05:19 PM Revision 79ff326b (cdmlib): ref #8907 basing testGetTaxonNodeUuidAndTitleCacheOfacceptedTaxaByClassificationForNameWithoutRank on TaxonNodeDaoHibernateImplTest.findWithoutRank.xml
- 03:58 PM Revision 49bfebfd (cdmlib): ref #8907 cleaning up test data
- 03:44 PM Revision f4f6d97b (cdmlib): ref #8907 SortableTaxonNodeQueryResultComparator to replace UuidAndTitleCacheTaxonComparator - step 2
- 03:44 PM Revision db026829 (cdmlib): ref #8907 SortableTaxonNodeQueryResultComparator to replace UuidAndTitleCacheTaxonComparator
- 02:37 PM Revision 9f12da77 (cdmlib): cleanup
- 02:32 PM feature request #8906: Refactor DNA Sample details view
- As this ticket is important for cleaning up additivity data I put it to the current milestone.
- 02:31 PM feature request #8906: Refactor DNA Sample details view
- By the way the derivedUnitFacace was originally meant to work with the Specimen list editor. For the tree editor it d...
- 12:02 PM feature request #8906: Refactor DNA Sample details view
- Especially determinations are missing there.
- 11:24 AM feature request #8906 (Closed): Refactor DNA Sample details view
- The DNA Sample details view is not handled like the other derived units by using the derivedUnitFacade.
- 01:12 PM bug #8733 (Closed): Descriptive data set: Specimens of a newly added taxon are not listed in Select Specimen dialog of the matrix editor
- Andreas Müller wrote:
> The fix seems to improve the situation a lot. If the dataset is changed the specimen list is... - 01:10 PM bug #8909: IAE (IllegalArgumentException) adding specimens to matrix editor
- **NOTE:** The exception is not handled correctly. It is neither displayed by the usual error dialog not is the stackt...
- 11:56 AM bug #8909 (New): IAE (IllegalArgumentException) adding specimens to matrix editor
this error popped up while testing for #8733
* Create new descriptive data set in caryphyllales_ssp
* addin...- 11:48 AM task #8908 (New): Clean up descriptive dataset data for Cactaceae
- Thinks to do:
* ~~remove empty DescriptionElementBase~~
* ~~remove aggregated taxon descriptions~~
* ~~remove cl... - 11:33 AM bug #8892 (Closed): Taxon search does not work for names without rank
- remaining tasks are copied to #8907, so we can close this ticket now
- 11:22 AM bug #8905 (Closed): Description Handling in ABCD import
- mail AM:
bei der Korrektur der Additivity Daten in caryo_spp fällt mir auf, dass wenn Specimen im Zuge von ABCD-DN... - 10:29 AM bug #8904 (Closed): Show "cloned" icon in factual data view
- Otherwise it is only visible in the details view that the description is a cloned description which may easily lead t...
- 10:21 AM bug #8903 (Closed): Remember expansion state in factual data view
- When removing a description from factual data view afterwards all remaining descriptions are expanded. They should be...
03/25/2020
- 07:26 PM feature request #8902 (New): Add "open in" menu to row menu in matrix editor
- If the row represents a taxon or a taxon description the according taxon should be opened in name or bulk (name or ta...
- 06:14 PM bug #8901 (Resolved): Deleting an aggregated description from a descriptive matrix does not delete the aggregated description itself
- I removed aggregated taxon description via the matrix editor.
This did not remove the descriptions from their accord... - 04:27 PM bug #8900 (Closed): Layout issues with new image viewer
- see
* http://www.palmweb.org/cdm_dataportal/taxon/7c0b9529-1b28-4e1e-afda-089ac63f58a3/images#?c=&m=&s=&cv=&manif... - 02:27 PM bug #8899 (Closed): NullPointerException (NPE) in ManifestController
- Mostly happens in flora-malesiana, see below and also in
* /flora-guianas/iiif/taxon/2bc3831d-c5bd-435e-8058-8d62... - 12:21 PM bug #8784 (Closed): Deleting a specimen description not possible
- 12:16 PM bug #8784: Deleting a specimen description not possible
- Andreas Müller wrote:
> Hi Katja, I just tried to delete the "test data" as described in the description of this tic... - 11:43 AM Revision 1cf756d1 (taxeditor): fix problem with last selected references
03/24/2020
- 05:22 PM bug #8784 (Feedback): Deleting a specimen description not possible
- Hi Katja, I just tried to delete the "test data" as described in the description of this ticket and as required in co...
- 11:37 AM Revision 75d2589a (taxeditor): Merge branch 'hotfix/5.13.1'
- 11:17 AM Revision ad74c7f6 (taxeditor): fix problem with last selected references
- 11:08 AM Revision 5c3b0220 (taxeditor): Updated version in pom / project files to taxeditor version : 5.13.1 and cdmlib version : 5.13.0
- 12:16 AM bug #8790 (Closed): Update measurement units for existing quantitative data missing a unit
- I did not write a script but all data was updated on production. Updates were needed on additivity_ontology, caryo_sp...
03/23/2020
- 11:04 PM Revision 97bdbb2f (cdmlib): cleanup
- 10:53 PM Revision b5ac767a (cdmlib): cleanup
- 03:37 PM bug #8790 (Feedback): Update measurement units for existing quantitative data missing a unit
- still needs to be done
- 02:23 PM Revision d3ea983c (cdm-server): Merge branch 'release/5.13.0' into develop
- 02:23 PM Revision 6fe17279 (cdm-server): jenkins merging release branch into master (strategy: theirs)
- 02:23 PM Revision 15949fa3 (cdm-server): updating poms for branch'release/5.13.0' with non-snapshot versions
- 02:22 PM Revision f7afb56b (cdm-webapp): Merge branch 'release/5.13.0' into develop
- 02:22 PM Revision 29d9600e (cdm-webapp): jenkins merging release branch into master (strategy: theirs)
- 02:21 PM Revision fe29c376 (cdm-webapp): updating poms for branch'release/5.13.0' with non-snapshot versions
- 02:21 PM Revision eb68f936 (cdm-webapp): jenkins bumping cdmlib.version and cdm.vaadin.version to 5.13.0
- 02:19 PM Revision c082ce18 (taxeditor): Merge branch 'release/5.13.0' into develop
- 02:08 PM Revision 2e07f720 (cdm-vaadin): Merge branch 'release/5.13.0' into develop
- 02:08 PM Revision 334ed878 (cdm-vaadin): jenkins merging release branch into master (strategy: theirs)
- 02:04 PM Revision 53714f94 (cdm-dataportal): Merge branch 'release/5.13.0' into develop
- 02:04 PM Revision 184d48f2 (cdm-vaadin): updating poms for branch'release/5.13.0' with non-snapshot versions
- 02:03 PM Revision 9423951f (cdm-vaadin): jenkins bumping cdmlib.version to 5.13.0
- 02:03 PM Revision a2fb43ac (cdm-dataportal): updating poms for branch'release/5.13.0' with non-snapshot versions
- 02:03 PM Revision 802b95d9 (cdm-dataportal): release-preparation: production level css
- 02:03 PM Revision a8452960 (taxeditor): Merge branch 'release/5.13.0'
- 01:49 PM Revision 9c799041 (cdmlib): Updating develop poms back to pre merge state
- 01:49 PM Revision c82ba5e5 (cdmlib): Merge branch 'master' into develop
- 01:49 PM Revision 2d05bcbf (cdmlib): updating develop poms to master versions to avoid merge conflicts
- 01:49 PM Revision 34f1f4e4 (cdmlib): Merge branch 'release/5.13.0'
- 01:28 PM Revision d01a3644 (cdmlib): updating poms for branch'release/5.13.0' with non-snapshot versions
- 01:26 PM Revision 1ab2fe80 (cdm-webapp): jenkins bumping cdmlib.version and cdm.vaadin.version to 5.13.0-SNAPSHOT
- 01:26 PM Revision 0d42921d (cdm-webapp): updating poms for 5.14.0-SNAPSHOT development
- 12:48 PM Revision c2049e8d (cdm-webapp): jenkins bumping cdmlib.version and cdm.vaadin.version to 5.14.0-SNAPSHOT
- 12:48 PM Revision 3b4720f8 (taxeditor): Updated version in pom / project files to taxeditor version : 5.14.0-SNAPSHOT and cdmlib version : 5.14.0-SNAPSHOT
- 12:48 PM Revision dd4d7a8a (taxeditor): Updated version in pom / project files to taxeditor version : 5.13.0 and cdmlib version : 5.13.0
- 12:45 PM Revision cafc4715 (cdm-vaadin): jenkins bumping cdmlib.version to 5.13.0-SNAPSHOT
- 12:45 PM Revision 6e715ca9 (cdm-vaadin): updating poms for 5.14.0-SNAPSHOT development
- 12:45 PM Revision a55c2afa (cdm-vaadin): updating poms for 5.13.0 branch with snapshot versions
- 12:45 PM Revision d9b7e73a (cdm-vaadin): jenkins bumping cdmlib.version to 5.14.0-SNAPSHOT
- 12:45 PM Revision 1eb7ae6e (cdm-server): updating poms for 5.14.0-SNAPSHOT development
- 12:44 PM Revision 73e7ce06 (cdm-dataportal): updating poms for 5.14.0-SNAPSHOT development
- 12:41 PM Revision 43306ae2 (cdmlib): updating poms for 5.14.0-SNAPSHOT development
- 12:29 PM bug #8860 (Closed): Sec reference not inherited from classification anymore
- Ok, this is definitely fixed.
- 11:16 AM Revision fc0e5d0a (taxeditor): ref #8047: fixing number of status issues - layout
- 12:38 AM bug #8733: Descriptive data set: Specimens of a newly added taxon are not listed in Select Specimen dialog of the matrix editor
- The fix seems to improve the situation a lot. If the dataset is changed the specimen list is recomputed.
Not yet s...
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