Activity
From 03/04/2020 to 04/02/2020
04/02/2020
- 11:43 PM feature request #8929 (New): Add "open folder" button to file/folder based exports
- e.g. for DwC-A export and CDMLight but maybe also for other exports.
The button should appear on the result dialo... - 11:24 PM task #8928: Swap menu entries for specimen bulk editors
- This I expect to be a no-brainer therefore I moved it to 5.14. If not please move further.
- 11:23 PM task #8928 (Closed): Swap menu entries for specimen bulk editors
- AM:
Können wir die Specimen-Einträge im Bulk-Editor Menü tauschen. Ich denke Specimen(Tree) ist der bei weitem meh... - 11:16 PM feature request #8891 (Closed): Add categorical and quantiative data to DwC-A
- Constantia (FoG) tested the new implementation and told me it worked as expected for her. So I close this ticket as t...
- 04:45 PM bug #8925 (Feedback): Users with ROLE_USER_MANAGER must be able to change any user password
- I tested the functionality and this works now as expected. So this ticket can be closed apart from the above suggestion.
- 04:31 PM bug #8925: Users with ROLE_USER_MANAGER must be able to change any user password
- please create an access method like:
~~~java
private UserHelper userHelper() {
if (userHelper == null){... - 03:38 PM bug #8925: Users with ROLE_USER_MANAGER must be able to change any user password
- please review
- 12:05 PM bug #8925 (Resolved): Users with ROLE_USER_MANAGER must be able to change any user password
- Applied in changeset commit:taxeditor|bfedf5f3d8e57c764333f355c09444dee9292ab5.
- 10:53 AM bug #8925 (Closed): Users with ROLE_USER_MANAGER must be able to change any user password
- For users with ROLE_USER_MANAGER the button in the User details view to change a users password must be generally ena...
- 04:15 PM bug #8815: Clean up TaxonNodeDto and UuidAndTitleCache usage in TaxonNodeService/Dao
- Hi Katja, I reverted the return types again from UuidAndTitleCache to TaxonNodeDto
Please review. - 04:14 PM Revision 925237ad (cdmlib): ref #8815 reverting return types from UuidAndTitleCache to TaxonNodeDto
- 04:14 PM Revision 05daad66 (cdmlib): Revert "ref #8815: add UuidAndTitleCache methods again in taxonnodeservice"
- This reverts commit 47c1bab5d954d21e17653072c211a7ae53e53e97 + 75e3aef5f2a567e2833c03f13194b062a5d58947
Resolved Con... - 04:14 PM Revision 4a186e0a (cdmlib): ref #6113 adding dependency to KML types
- 04:12 PM task #8834 (Closed): use TaxonNodeDto instead of UuidAndTitleCache
- done.
- 04:11 PM Revision 0d7a94de (cdm-vaadin): ref #8834 UuidAndtitleCache replaced by TaxonNodeDto
- 02:57 PM Revision 7c6f3c4d (cdmlib-apps): fix #8886 minor changes to lichenes genera import
- 02:46 PM Revision e35a72c0 (cdmlib-apps): cleanup poms in cdmlib-app
- 02:44 PM task #8886 (Resolved): Import Lichenes Genera
- Applied in changeset commit:cdmlib-apps|1773366920844ffb75b8ef5a21e2e8e778d0e107.
- 02:40 PM Revision 17733669 (cdmlib-apps): fix #8886 finalize lichenes genera import
- 01:28 PM Revision 1e61fa5c (taxeditor): fix #8925: activate user and usergroup menu for userManager
- 01:04 PM Revision 21a9887f (cdmlib): cleanup
- 01:04 PM Revision 2f705779 (cdmlib): ref #8886 add Fungi to NonViralNameParserImpl
- 01:04 PM Revision ac56518d (cdmlib): remove redundant factory code in User
- 12:06 PM Revision bfedf5f3 (taxeditor): fix #8925: and fix #8927 use role_admin for check whether user is admin and check for user_manager for right to edit pwd
- 12:05 PM bug #8927 (Resolved): Fix isAdmin() method in LoginManager
- Applied in changeset commit:taxeditor|bfedf5f3d8e57c764333f355c09444dee9292ab5.
- 12:03 PM bug #8927 (Closed): Fix isAdmin() method in LoginManager
- The isAdmin() method uses only the name of the user to check whether the user is admin or not, but should use the rol...
- 11:01 AM feature request #8926 (Closed): Remove 'expired' flags in users details
- The fields 'Account Non Expired', 'Account locked', 'Credentials non Expired' are not used yet, so they should not be...
- 10:47 AM Revision f743c072 (taxeditor): make all expired flags for users invisible
- 09:38 AM bug #8916: ConcurrentModificationException in CdmFormFactory.destroyElement()
- Avoid the ConcurrentModificationException by using an iterator for iterating over the elements of a set to destroy th...
- 09:22 AM bug #8916 (Resolved): ConcurrentModificationException in CdmFormFactory.destroyElement()
- Applied in changeset commit:taxeditor|002ea91bea2170b2f7307f8c7bf791e7c6ab28e0.
- 09:37 AM Revision c2286033 (taxeditor): fix #8916: avoid concurrent modification exception
- 09:22 AM Revision 002ea91b (taxeditor): fix #8916: avoid concurrent modification exception
04/01/2020
- 03:19 PM Revision 44f44469 (cdm-dataportal): commenting dead code
- 03:13 PM feature request #8895: Specimen page: show specimen description as continuous text
- Andreas Müller wrote:
> Is there a link on test for reviewing? Then maybe also Norbert can have a look if it looks a... - 03:01 PM feature request #8895 (Resolved): Specimen page: show specimen description as continuous text
- Is there a link on test for reviewing? Then maybe also Norbert can have a look if it looks as expected.
- 02:39 PM feature request #8895 (Closed): Specimen page: show specimen description as continuous text
- done
- 02:39 PM feature request #8895 (Resolved): Specimen page: show specimen description as continuous text
- Applied in changeset commit:cdm-dataportal|2527a83cee421e06ea133960964442d2fd19905a.
- 02:05 PM feature request #8895 (In Progress): Specimen page: show specimen description as continuous text
- 02:50 PM bug #8923 (Duplicate): NullPointerException (NPE) after attempt to save invalid Group name
- This duplicates #7699
- 02:11 PM bug #8923: NullPointerException (NPE) after attempt to save invalid Group name
- Is this easy to fix? Otherwise move to next milestone.
- 12:50 PM bug #8923 (Duplicate): NullPointerException (NPE) after attempt to save invalid Group name
- Group editor:
* Change exiting Group name to invalid name (add whitespace character)
* Save --> Error due to in... - 02:38 PM Revision 2527a83c (cdm-dataportal): fix #8895 fix showing specimen descriptions as running text
- 02:36 PM Revision 26149ae1 (cdm-dataportal): fix showing specimen descriptions as running text
- 01:55 PM Revision f6524e30 (taxeditor): fix #8904: show copy icon as clone icon in factual data view
- 01:55 PM bug #8904 (Resolved): Show "cloned" icon in factual data view
- Applied in changeset commit:taxeditor|f6524e305046c69ff209143af2c4a12d36bad975.
- 01:52 PM feature request #8471: Computed descriptions should be disabled in TaxEditor
- I did some research but it seems to be a little bit more complex because this needs to be implemented by a mouseListe...
- 01:30 PM bug #7376: doubtful taxa not easy to find
- Vielleicht sollten wir überlegen ob die hier verwendete Suche tatsächlich die Richtige ist. Vermutlich wird hier doch...
- 01:23 PM bug #8924 (New): Select dialog for GrantedAuthorities is unusable with many GAs in the DB
- In the phycobank db the select dialog for GrantedAuthorities completely blocks the whole editor.
- 11:40 AM Revision 21938b11 (taxeditor): fix #8906: adapt dnaSample details view creation to other derived units
- 11:39 AM feature request #8906: Refactor DNA Sample details view
- Applied in changeset commit:taxeditor|21938b114f742509677d4d883f91f0883dc70683.
- 11:34 AM feature request #8906 (Resolved): Refactor DNA Sample details view
- Now, the dna sample details view is handled analogue to the other derived units. So the determination can be shown, n...
- 11:14 AM bug #8428 (Resolved): NPE in ClassificationServiceImpl.loadTreeBranchToTaxon()
- Applied in changeset commit:cdmlib|380b0e353b61b451d378c7d4341c111a11534c32.
- 11:13 AM bug #8428: NPE in ClassificationServiceImpl.loadTreeBranchToTaxon()
- observed again :
~~~
[algaterra] 2020-03-29 10:00:50,924 INFO [qtp1018547642-5078] [eu.etaxonomy.cdm.remote.contr... - 11:14 AM Revision 380b0e35 (cdmlib): fix #8428 avoiding NPE
- 10:57 AM task #8379: Review strange specimen implementations
- Andreas Müller wrote:
> I think we decided to move this issue to AK. Please correct me if wrong.
Yes, exactly. Bu... - 10:47 AM task #8379: Review strange specimen implementations
- I think we decided to move this issue to AK. Please correct me if wrong.
Please also decide which milestone it sho...
03/31/2020
- 03:22 PM feature request #8922 (Duplicate): Make setting of sec-Reference configurable when moving synonyms.
- Currently the sec ref is automatically taken from the new accepted taxon when moving (or adding) a synonym. This is n...
- 11:25 AM bug #8917: NPE when opening Acacia in Name bulk editor (from search)
- this should be fixed, please review
- 11:24 AM bug #8917 (Resolved): NPE when opening Acacia in Name bulk editor (from search)
- Applied in changeset commit:taxeditor|163a48b01b39469cfa576645eacc98e303b9f9eb.
- 11:25 AM Revision 163a48b0 (taxeditor): fix #8917: fix open_in Bulkeditor
- 11:10 AM bug #8905 (Resolved): Description Handling in ABCD import
- 08:51 AM bug #8905: Description Handling in ABCD import
- Andreas Müller wrote:
> Katja Luther wrote:
> > The description handling is fixed now, but another problem is the t... - 08:49 AM bug #8905: Description Handling in ABCD import
- Katja Luther wrote:
> The description handling is fixed now, but another problem is the titlecache creation. After a... - 08:40 AM bug #8905: Description Handling in ABCD import
- The description handling is fixed now, but another problem is the titlecache creation. After adding a new source to t...
- 11:04 AM bug #8918: Add "set as basionym" to accepted taxon
- please review
- 11:03 AM bug #8918 (Resolved): Add "set as basionym" to accepted taxon
- Applied in changeset commit:taxeditor|2bef172d75871c83d777b56b7bc5d552f4fcea2e.
- 08:55 AM bug #8918: Add "set as basionym" to accepted taxon
- If not easy to implement please move to other milestone.
- 08:54 AM bug #8918 (Closed): Add "set as basionym" to accepted taxon
- WGB:
eine kleine Verbesserungsmöglichkeit: Bei den Synonymen der heterotypischen Gruppen kann man im NameEditor (ü... - 11:04 AM Revision 2bef172d (taxeditor): fix #8918: setBasionym also for accepted taxon
- 09:20 AM Revision efd5530a (taxeditor): fix #8919: shorten reference detail label
- 09:19 AM bug #8919 (Resolved): Shorten label for "Reference Detail"
- Applied in changeset commit:taxeditor|efd5530a08f475114b948ccc86cd76742ef62096.
- 08:58 AM bug #8919 (Closed): Shorten label for "Reference Detail"
- Use "Ref. Detail" instead.
In Details View for nom. ref. - 09:19 AM bug #8921 (New): Set sec for subtree not always successful
- WGB:
ich glaube, ich hatte gerade wieder den Fall, den ich schon letzte Woche bemerkt hatte.
Ich habe (in Caryoph... - 09:08 AM feature request #8920 (New): Make reference URL available in details view
- e.g. by having a button to open it or by having the label clickable and blue if an URL exists.
Note: in future the... - 08:42 AM Revision 78bba475 (cdmlib): ref #8905: fix description handling in specimen imports
03/30/2020
- 04:21 PM Revision f84a4e81 (cdmlib): ref #8907 adapting method to SortableTaxonNodeQueryResult - adding test
- 04:06 PM Revision 5db2ebcd (cdmlib): ref #8907 adapting method to SortableTaxonNodeQueryResult and fixing NPE
- 03:12 PM bug #8917: NPE when opening Acacia in Name bulk editor (from search)
- Please delete the orphaned name after fixing this ticket.
- 03:06 PM bug #8917 (Closed): NPE when opening Acacia in Name bulk editor (from search)
- in FoG.
* Search for Acacia ( in FoG)
* Open the pure name (orphaned name) via context menu -> bulk editor
* =>... - 01:27 PM bug #8899 (Closed): NullPointerException (NPE) in ManifestController
- solved and tested at the example given in the description
- 01:26 PM bug #8899 (Resolved): NullPointerException (NPE) in ManifestController
- Applied in changeset commit:cdmlib|9fc7d8affc2e6c2bc83bc86dac76eec14ce5d8a3.
- 01:26 PM Revision 9fc7d8af (cdmlib): fix #8899 fixing 4 NPEs in ManifestController
- 12:31 PM Revision 3c9af367 (cdmlib): ref #8907 adding missing constructor to hql query
- 11:55 AM bug #8916: ConcurrentModificationException in CdmFormFactory.destroyElement()
- mail WB:
Hallo,
nach Save nach Ändern der sec.-Ref. im Details-View.
HG
W
~~~
last remote method : http:/... - 11:54 AM bug #8916: ConcurrentModificationException in CdmFormFactory.destroyElement()
- mail WB:
Hallo,
entfernen der Doubtful-Flag im Details View, Save -> Fehler
HG
W
~~~
last remote method : h... - 11:53 AM bug #8916 (In Progress): ConcurrentModificationException in CdmFormFactory.destroyElement()
- While updating the views sometimes a ConcurrentModificationException appears while AbstractCdmDataViewerE4.destroySec...
- 11:39 AM bug #8857: NonUniqueObjectException when creating new taxon
- another time:
mail WB:
Hallo,
beim Erstellen eines neuen Taxon aus dem Navigator heraus.
HG
W
~~~ text
...
03/29/2020
- 08:22 AM Revision a77d57ae (cdmlib-apps): cleanup
- 08:20 AM Revision 6e5a5397 (cdmlib-apps): ref #8886 first not yet compiling version of Lichenes import
03/27/2020
- 07:17 PM bug #8915 (Duplicate): ID in Vocabulary is not shown in term editor
- 07:15 PM bug #8915 (Duplicate): ID in Vocabulary is not shown in term editor
- The ID in VOcabulary is not shown anymore in the label of the term editor, also if the preference is set to "Show ID ...
- 05:57 PM bug #8914 (Closed): jetty 9.4.x returns error states as json which are parsed and processes by cdm_dataportal
- 05:38 PM bug #8914 (Resolved): jetty 9.4.x returns error states as json which are parsed and processes by cdm_dataportal
- Applied in changeset commit:cdm-dataportal|4e5b23aeacdb46064b71a6f76354862ff61223ee.
- 05:32 PM bug #8914: jetty 9.4.x returns error states as json which are parsed and processes by cdm_dataportal
- the original issue subject was a misinterpretation of the symptoms, the real cause is different - will change the tic...
- 05:11 PM bug #8914 (Closed): jetty 9.4.x returns error states as json which are parsed and processes by cdm_dataportal
- jetty 9.4.x returns error states as json which are parsed and processes by cdm_dataportal completely breaks with the ...
- 05:42 PM Revision 159d2dd8 (cdm-dataportal): Merge tag '5.13.1' into develop
- tagging 5.13.1
- 05:42 PM Revision 17e22c80 (cdm-dataportal): Merge branch 'hotfix/5.13.1'
- 05:41 PM Revision 3e88c44c (cdm-dataportal): fix #8914 replacing parsed jetty error responses by null (also ref #2711)
- 05:38 PM Revision 4e5b23ae (cdm-dataportal): fix #8914 replacing parsed jetty error responses by null (also ref #2711)
- 05:20 PM Revision 0ee7ae82 (cdmlib): cleanup
- 04:53 PM Revision 01ff0c5e (cdmlib): cleanup
- 04:46 PM Revision 68acc871 (cdmlib): cleanup and remove ITitleDao.findByTitleAndClass(xxx) (2)
- 04:36 PM bug #8911: LazyInitializationException (LIE) in portal/description/{uuid}
- please review
- 04:23 PM bug #8911 (Resolved): LazyInitializationException (LIE) in portal/description/{uuid}
- Applied in changeset commit:cdmlib|f4bffe1d71350100bb634d183424a441c3777530.
- 10:46 AM bug #8911 (Closed): LazyInitializationException (LIE) in portal/description/{uuid}
- http://api.cybertaxonomy.org/caryophyllales_spp/portal/description/f4fc4b11-90c7-4a02-b236-2d58f5891e6e.json
~~~
... - 04:24 PM Revision 6ade84be (cdmlib): cleanup and remove ITitleDao.findByTitleAndClass(xxx)
- 04:23 PM Revision f4bffe1d (cdmlib): fix #8911 fixing initstrategy for Taxon Descriptions
- 04:09 PM Revision 243e8f68 (cdmlib): cleanup
- 04:02 PM Revision 51132c21 (cdmlib): cleanup
- 03:47 PM bug #8536 (Duplicate): Connect Dialog: UI elements exceed the available space
- 03:46 PM bug #7189: Taxeditor connect dialog high-dpi suport
- The same probelm exists in windows 10:
(*Windows 10 at text size 150%*) - 03:30 PM bug #8913 (Resolved): InInVoc not showing up anymore in TermEditor
- 03:29 PM bug #8913 (Closed): InInVoc not showing up anymore in TermEditor
- ... even if local preference for Term Editor is set to "show vocabulary id"
- 03:27 PM Revision 74b13aca (cdm-vaadin): adapting to moved ReferenceEllypsisFormatter
- 12:11 PM Revision 7f063f2e (taxeditor): fix term label provider for term editor
- 12:08 PM bug #8548 (Closed): ReferenceEditor: Layout problem when opening Reference editor (new journal, new book, new thesis)
- Reviewed in the released production system. No problems. Set the ticket to closed.
- 11:34 AM Revision c6a73aed (cdmlib): fix correct handling of description configuration
- 11:09 AM Revision 41ad665a (cdmlib): moving ReferenceEllypsisFormatter to package eu.etaxonomy.cdm.format.reference
- 10:43 AM feature request #8906: Refactor DNA Sample details view
- Andreas Müller wrote:
> Katja Luther wrote:
> > Andreas Müller wrote:
> > > By the way the derivedUnitFacace was o... - 09:37 AM feature request #8906: Refactor DNA Sample details view
- Katja Luther wrote:
> Andreas Müller wrote:
> > By the way the derivedUnitFacace was originally meant to work with ... - 09:25 AM feature request #8906: Refactor DNA Sample details view
- Andreas Müller wrote:
> By the way the derivedUnitFacace was originally meant to work with the Specimen list editor.... - 10:21 AM bug #8910: Correct handling of preference for determinations
- Andreas Müller wrote:
> AM:
>
> Wie soll denn jetzt die genaue Semantik sein? Ich würde ja vom Namen her denken, ... - 10:11 AM bug #8910: Correct handling of preference for determinations
- AM:
Wie soll denn jetzt die genaue Semantik sein? Ich würde ja vom Namen her denken, dass die Determinations für F... - 10:10 AM bug #8910 (Resolved): Correct handling of preference for determinations
- 10:06 AM bug #8910 (Closed): Correct handling of preference for determinations
- 09:37 AM Revision 10c5f268 (taxeditor): correct handling of pref determinations only for field units
03/26/2020
- 05:19 PM task #8907 (Resolved): replace UuidAndTitleCacheTaxonComparator by type save implementation
- ticket completed.
- 11:31 AM task #8907 (Resolved): replace UuidAndTitleCacheTaxonComparator by type save implementation
- copied from #8892:
`UuidAndTitleCacheTaxonComparator` is used by different methods which pass Object array with d... - 05:19 PM Revision 79ff326b (cdmlib): ref #8907 basing testGetTaxonNodeUuidAndTitleCacheOfacceptedTaxaByClassificationForNameWithoutRank on TaxonNodeDaoHibernateImplTest.findWithoutRank.xml
- 03:58 PM Revision 49bfebfd (cdmlib): ref #8907 cleaning up test data
- 03:44 PM Revision f4f6d97b (cdmlib): ref #8907 SortableTaxonNodeQueryResultComparator to replace UuidAndTitleCacheTaxonComparator - step 2
- 03:44 PM Revision db026829 (cdmlib): ref #8907 SortableTaxonNodeQueryResultComparator to replace UuidAndTitleCacheTaxonComparator
- 02:37 PM Revision 9f12da77 (cdmlib): cleanup
- 02:32 PM feature request #8906: Refactor DNA Sample details view
- As this ticket is important for cleaning up additivity data I put it to the current milestone.
- 02:31 PM feature request #8906: Refactor DNA Sample details view
- By the way the derivedUnitFacace was originally meant to work with the Specimen list editor. For the tree editor it d...
- 12:02 PM feature request #8906: Refactor DNA Sample details view
- Especially determinations are missing there.
- 11:24 AM feature request #8906 (Closed): Refactor DNA Sample details view
- The DNA Sample details view is not handled like the other derived units by using the derivedUnitFacade.
- 01:12 PM bug #8733 (Closed): Descriptive data set: Specimens of a newly added taxon are not listed in Select Specimen dialog of the matrix editor
- Andreas Müller wrote:
> The fix seems to improve the situation a lot. If the dataset is changed the specimen list is... - 01:10 PM bug #8909: IAE (IllegalArgumentException) adding specimens to matrix editor
- **NOTE:** The exception is not handled correctly. It is neither displayed by the usual error dialog not is the stackt...
- 11:56 AM bug #8909 (New): IAE (IllegalArgumentException) adding specimens to matrix editor
this error popped up while testing for #8733
* Create new descriptive data set in caryphyllales_ssp
* addin...- 11:48 AM task #8908 (New): Clean up descriptive dataset data for Cactaceae
- Thinks to do:
* ~~remove empty DescriptionElementBase~~
* ~~remove aggregated taxon descriptions~~
* ~~remove cl... - 11:33 AM bug #8892 (Closed): Taxon search does not work for names without rank
- remaining tasks are copied to #8907, so we can close this ticket now
- 11:22 AM bug #8905 (Closed): Description Handling in ABCD import
- mail AM:
bei der Korrektur der Additivity Daten in caryo_spp fällt mir auf, dass wenn Specimen im Zuge von ABCD-DN... - 10:29 AM bug #8904 (Closed): Show "cloned" icon in factual data view
- Otherwise it is only visible in the details view that the description is a cloned description which may easily lead t...
- 10:21 AM bug #8903 (Closed): Remember expansion state in factual data view
- When removing a description from factual data view afterwards all remaining descriptions are expanded. They should be...
03/25/2020
- 07:26 PM feature request #8902 (New): Add "open in" menu to row menu in matrix editor
- If the row represents a taxon or a taxon description the according taxon should be opened in name or bulk (name or ta...
- 06:14 PM bug #8901 (Resolved): Deleting an aggregated description from a descriptive matrix does not delete the aggregated description itself
- I removed aggregated taxon description via the matrix editor.
This did not remove the descriptions from their accord... - 04:27 PM bug #8900 (Closed): Layout issues with new image viewer
- see
* http://www.palmweb.org/cdm_dataportal/taxon/7c0b9529-1b28-4e1e-afda-089ac63f58a3/images#?c=&m=&s=&cv=&manif... - 02:27 PM bug #8899 (Closed): NullPointerException (NPE) in ManifestController
- Mostly happens in flora-malesiana, see below and also in
* /flora-guianas/iiif/taxon/2bc3831d-c5bd-435e-8058-8d62... - 12:21 PM bug #8784 (Closed): Deleting a specimen description not possible
- 12:16 PM bug #8784: Deleting a specimen description not possible
- Andreas Müller wrote:
> Hi Katja, I just tried to delete the "test data" as described in the description of this tic... - 11:43 AM Revision 1cf756d1 (taxeditor): fix problem with last selected references
03/24/2020
- 05:22 PM bug #8784 (Feedback): Deleting a specimen description not possible
- Hi Katja, I just tried to delete the "test data" as described in the description of this ticket and as required in co...
- 11:37 AM Revision 75d2589a (taxeditor): Merge branch 'hotfix/5.13.1'
- 11:17 AM Revision ad74c7f6 (taxeditor): fix problem with last selected references
- 11:08 AM Revision 5c3b0220 (taxeditor): Updated version in pom / project files to taxeditor version : 5.13.1 and cdmlib version : 5.13.0
- 12:16 AM bug #8790 (Closed): Update measurement units for existing quantitative data missing a unit
- I did not write a script but all data was updated on production. Updates were needed on additivity_ontology, caryo_sp...
03/23/2020
- 11:04 PM Revision 97bdbb2f (cdmlib): cleanup
- 10:53 PM Revision b5ac767a (cdmlib): cleanup
- 03:37 PM bug #8790 (Feedback): Update measurement units for existing quantitative data missing a unit
- still needs to be done
- 02:23 PM Revision d3ea983c (cdm-server): Merge branch 'release/5.13.0' into develop
- 02:23 PM Revision 6fe17279 (cdm-server): jenkins merging release branch into master (strategy: theirs)
- 02:23 PM Revision 15949fa3 (cdm-server): updating poms for branch'release/5.13.0' with non-snapshot versions
- 02:22 PM Revision f7afb56b (cdm-webapp): Merge branch 'release/5.13.0' into develop
- 02:22 PM Revision 29d9600e (cdm-webapp): jenkins merging release branch into master (strategy: theirs)
- 02:21 PM Revision fe29c376 (cdm-webapp): updating poms for branch'release/5.13.0' with non-snapshot versions
- 02:21 PM Revision eb68f936 (cdm-webapp): jenkins bumping cdmlib.version and cdm.vaadin.version to 5.13.0
- 02:19 PM Revision c082ce18 (taxeditor): Merge branch 'release/5.13.0' into develop
- 02:08 PM Revision 2e07f720 (cdm-vaadin): Merge branch 'release/5.13.0' into develop
- 02:08 PM Revision 334ed878 (cdm-vaadin): jenkins merging release branch into master (strategy: theirs)
- 02:04 PM Revision 53714f94 (cdm-dataportal): Merge branch 'release/5.13.0' into develop
- 02:04 PM Revision 184d48f2 (cdm-vaadin): updating poms for branch'release/5.13.0' with non-snapshot versions
- 02:03 PM Revision 9423951f (cdm-vaadin): jenkins bumping cdmlib.version to 5.13.0
- 02:03 PM Revision a2fb43ac (cdm-dataportal): updating poms for branch'release/5.13.0' with non-snapshot versions
- 02:03 PM Revision 802b95d9 (cdm-dataportal): release-preparation: production level css
- 02:03 PM Revision a8452960 (taxeditor): Merge branch 'release/5.13.0'
- 01:49 PM Revision 9c799041 (cdmlib): Updating develop poms back to pre merge state
- 01:49 PM Revision c82ba5e5 (cdmlib): Merge branch 'master' into develop
- 01:49 PM Revision 2d05bcbf (cdmlib): updating develop poms to master versions to avoid merge conflicts
- 01:49 PM Revision 34f1f4e4 (cdmlib): Merge branch 'release/5.13.0'
- 01:28 PM Revision d01a3644 (cdmlib): updating poms for branch'release/5.13.0' with non-snapshot versions
- 01:26 PM Revision 1ab2fe80 (cdm-webapp): jenkins bumping cdmlib.version and cdm.vaadin.version to 5.13.0-SNAPSHOT
- 01:26 PM Revision 0d42921d (cdm-webapp): updating poms for 5.14.0-SNAPSHOT development
- 12:48 PM Revision c2049e8d (cdm-webapp): jenkins bumping cdmlib.version and cdm.vaadin.version to 5.14.0-SNAPSHOT
- 12:48 PM Revision 3b4720f8 (taxeditor): Updated version in pom / project files to taxeditor version : 5.14.0-SNAPSHOT and cdmlib version : 5.14.0-SNAPSHOT
- 12:48 PM Revision dd4d7a8a (taxeditor): Updated version in pom / project files to taxeditor version : 5.13.0 and cdmlib version : 5.13.0
- 12:45 PM Revision cafc4715 (cdm-vaadin): jenkins bumping cdmlib.version to 5.13.0-SNAPSHOT
- 12:45 PM Revision 6e715ca9 (cdm-vaadin): updating poms for 5.14.0-SNAPSHOT development
- 12:45 PM Revision a55c2afa (cdm-vaadin): updating poms for 5.13.0 branch with snapshot versions
- 12:45 PM Revision d9b7e73a (cdm-vaadin): jenkins bumping cdmlib.version to 5.14.0-SNAPSHOT
- 12:45 PM Revision 1eb7ae6e (cdm-server): updating poms for 5.14.0-SNAPSHOT development
- 12:44 PM Revision 73e7ce06 (cdm-dataportal): updating poms for 5.14.0-SNAPSHOT development
- 12:41 PM Revision 43306ae2 (cdmlib): updating poms for 5.14.0-SNAPSHOT development
- 12:29 PM bug #8860 (Closed): Sec reference not inherited from classification anymore
- Ok, this is definitely fixed.
- 11:16 AM Revision fc0e5d0a (taxeditor): ref #8047: fixing number of status issues - layout
- 12:38 AM bug #8733: Descriptive data set: Specimens of a newly added taxon are not listed in Select Specimen dialog of the matrix editor
- The fix seems to improve the situation a lot. If the dataset is changed the specimen list is recomputed.
Not yet s...
03/22/2020
- 09:12 PM Revision 3afc2686 (taxeditor): ref #8047: fixing number of status issues
- 09:10 PM task #8047: Remaining issues in TaxDistributionEditor
- Andreas Müller wrote:
> Andreas Müller wrote:
> > The number field in the preferences is still not wide enough
>
... - 09:09 PM task #8047: Remaining issues in TaxDistributionEditor
- Andreas Müller wrote:
> >Try to optimize the column width at start or after area selection. Details may be discussed.... - 09:01 PM task #8047: Remaining issues in TaxDistributionEditor
- Andreas Müller wrote:
> Currently it is not possible to enter the status in the details view (the field is disabled)...
03/21/2020
- 01:29 PM bug #8562: Remaining issues for preference pages
- Katja Luther wrote:
> Andreas Müller wrote:
>
> > The Label "Acutal status selection, the area specific selectio... - 01:10 PM bug #8562 (Feedback): Remaining issues for preference pages
- Katja Luther wrote:
> Andreas Müller wrote:
> > >The general io page should contain the „Show Export/Import Menu“ o... - 12:59 PM task #8047: Remaining issues in TaxDistributionEditor
- This ticket is now fully reviewed. Only the issues I mentioned are still open (as far as I can see).
- 12:58 PM task #8047: Remaining issues in TaxDistributionEditor
- Andreas Müller wrote:
> Andreas Müller wrote:
> > >Sort status in drop down alphabetically
> >
> > This mostly seems... - 12:51 PM task #8047: Remaining issues in TaxDistributionEditor
- Andreas Müller wrote:
> >Sort status in drop down alphabetically
>
> This mostly seems to be fixed but I found 1 ... - 12:20 PM task #8047: Remaining issues in TaxDistributionEditor
- >Sort status in drop down alphabetically
~~This mostly seems to be fixed but I found 1 case in rem_conf_am where i... - 12:16 PM task #8047 (Feedback): Remaining issues in TaxDistributionEditor
- Currently it is not possible to enter the status in the details view (the field is disabled). I do not fully remember...
- 12:03 PM task #8047: Remaining issues in TaxDistributionEditor
- >Try to optimize the column width at start or after area selection. Details may be discussed. We have/had a similar d...
- 11:56 AM task #8047: Remaining issues in TaxDistributionEditor
- It is not possible to define "use default" for the number of dropdown items, neither for DB prefs nor for local prefs.
- 11:55 AM task #8047: Remaining issues in TaxDistributionEditor
- Andreas Müller wrote:
> The number field in the preferences is still not wide enough
The problem is it changes th... - 11:45 AM task #8047: Remaining issues in TaxDistributionEditor
- Katja Luther wrote:
> Katja Luther wrote:
> > Andreas Müller wrote:
> > > ... no it looks like the 2 influence eac... - 11:11 AM task #8047: Remaining issues in TaxDistributionEditor
- The number field in the preferences is still not wide enough
- 01:52 AM bug #8892: Taxon search does not work for names without rank
- By the way, I saw that there is a new test data file TaxonNodeDaoHibernateImplTest.findWithoutRank.xml which seems to...
- 01:39 AM bug #8892: Taxon search does not work for names without rank
- I do not really understand this. The test failed because commit 919b6fe025ff1b9 did change the number of parameters i...
- 01:27 AM Revision 65867bfc (cdmlib): fix #8892 fix select statement for TaxonNodeDaoHibernateImpl.getUuidAndTitleCache()
03/20/2020
- 10:16 PM bug #8892: Taxon search does not work for names without rank
- The new test method obviously fails due to the problem described above http://int.e-taxonomy.eu/jenkins/job/cdmlib-IN...
- 07:50 PM bug #8892: Taxon search does not work for names without rank
- Andreas Müller wrote:
> The ticket here is only about handling null values correctly which can be done without huge ... - 04:47 PM bug #8892: Taxon search does not work for names without rank
- The ticket here is only about handling null values correctly which can be done without huge changes.
- 04:46 PM bug #8892: Taxon search does not work for names without rank
- I have not checked the above but probably you are right that we should clean it up in such a way.
But I strongly rec... - 03:24 PM bug #8892: Taxon search does not work for names without rank
- Working on this code a couple of questions are coming up, since a couple of things are quire unclear:
1)
As las... - 07:46 PM Revision 04825efd (cdmlib): ref #8892 implementing test for TaxonNodeDaoHibernateImpl.getUuidAndTitleCache()
- 07:46 PM Revision 919b6fe0 (cdmlib): ref #8892 loading ranks in hql with LEFT OUTER JOINs
- 04:12 PM bug #8531 (Closed): factual data and media view always opened when opening taxon
- 04:11 PM bug #8898 (New): Remaining problems with closed/open facts/media view when opening taxon editor or distribution editor
- copied from #8531:
This mostly works but sometimes the behavior is still unexpected, but not that easy to reproduc... - 04:08 PM task #8047 (Resolved): Remaining issues in TaxDistributionEditor
- please review the issues, mentioned above
- 09:51 AM task #8047: Remaining issues in TaxDistributionEditor
- Andreas Müller wrote:
> "Choose Source" does not change label if a source is already selected. It may change label t... - 04:07 PM bug #8860 (Resolved): Sec reference not inherited from classification anymore
- 12:12 PM feature request #8891: Add categorical and quantiative data to DwC-A
- Please review who ever wants to review. But don't close the ticket as there are open issues (test and remaining field...
- 12:40 AM feature request #8891: Add categorical and quantiative data to DwC-A
- Test with categorical data is not yet running as saving of state is problematic (it is DefinedTermBase), all the rest...
- 11:17 AM bug #8897 (Closed): [Mac] Jre Taxeditor fails to start in MacOS X
- Problem solved. The taxeditor-JRE starts again on MacOS X
- 09:59 AM bug #8897 (Resolved): [Mac] Jre Taxeditor fails to start in MacOS X
- It looks as if the folder structure in the app has been changed due to modified tycho packaging.
I adapted the path... - 09:53 AM bug #8897 (Closed): [Mac] Jre Taxeditor fails to start in MacOS X
- The Taxeditor product which is bundled with JRE fails to start on MacOS X.
A warning is shown instead, notifying t... - 10:26 AM Revision 0f76f092 (taxeditor): ref #8047: add l10n files
- 10:15 AM task #7404: Add linux and mac to editor installation documentation
- Andreas Kohlbecker wrote:
> Hi Andreas, I take this ticket - OK?
sure
- 09:44 AM task #7404: Add linux and mac to editor installation documentation
- Hi Andreas, I take this ticket - OK?
- 09:56 AM Revision 0016bbd3 (taxeditor): ref #8897 adapting jre path to modified tycho packaging
- 09:49 AM Revision 0ac4c430 (taxeditor): ref #8047: switch button label depending of existing default source
- 09:48 AM EDIT Platform Etablierung task #8896 (Rejected): Review tickets in milestone Edit>Update Documentation
- A *Target Version* exists in the Edit project which is dedicated to documentation update tasks:
https://dev.e-tax... - 09:13 AM Revision e9069de4 (taxeditor): ref #8860: fix add classification ref as sec reference
- 12:03 AM Revision 9582c6f6 (cdmlib): ref #8891 preliminary remove state from test for categorical data (as saving does not work yet)
03/19/2020
- 11:34 PM Revision 60486ba1 (cdmlib): ref #8891 preliminary remove state from test for categorical data (as saving does not work yet)
- 11:22 PM feature request #8891 (Resolved): Add categorical and quantiative data to DwC-A
- 11:19 PM Revision 4f90ce94 (cdmlib): cleanup
- 11:19 PM Revision 44320911 (cdmlib): ref #8891 Add CategoricalData and QuantitativeData to DwCA export
- 11:19 PM Revision a81e3c1b (cdmlib): move base formatter to base package
- 09:59 PM bug #8860 (In Progress): Sec reference not inherited from classification anymore
- For me this is still not working.
The new Taxon dialog shows the sec.-reference:
But i... - 03:10 PM Revision c21cfd4b (cdm-dataportal): ref #8328 fixing bug in render_taxon_or_name related to nomrefs
- 02:33 PM bug #8892: Taxon search does not work for names without rank
- The current solution solves the problem but contradicts the idea of UuidAndTitleCache (DTO). This idea is to not init...
- 02:25 PM bug #8531 (Feedback): factual data and media view always opened when opening taxon
- This mostly works but sometimes the behavior is still unexpected, but not that easy to reproduce.
Something that o... - 02:05 PM bug #8879 (Closed): strange file name for export file
- Now it looks as expected
- 11:34 AM feature request #8044 (Closed): Add "Move to..." menu to term editor
- Excellently solved!
I could not find further problems or glitches which are not yet handled in other tickets. - 10:20 AM feature request #8044 (Resolved): Add "Move to..." menu to term editor
- Applied in changeset commit:taxeditor|29f07c5dca339559d9bc5e7efd351ec4fa5f3869.
- 09:50 AM feature request #8044: Add "Move to..." menu to term editor
- Katja Luther wrote:
> In windows the finish button is highlighted after selecting the parent and when no parent is s... - 07:15 AM feature request #8044: Add "Move to..." menu to term editor
- In windows the finish button is highlighted after selecting the parent and when no parent is selected disabled.
 - 04:23 PM feature request #8885: Distinguish between terms and vocabularies in term search dialog
- adding a screenshot to illustrate the confusion
- 02:29 PM feature request #8624 (Closed): Add abbrev title cache to search in bulk editor
- I tested with the caryophyllales_spp data at the example of the name *Achatocarpus balansae Schinz & Autran*
The ... - 01:02 PM bug #8894 (Closed): fix jenkins job cdm-server_trigger_remote-INSTALL
- I decided for using the *Build Authorization Token Root Plugin*. This adds another plugin dependency but avoids manag...
- 11:55 AM bug #8328 (Resolved): Unpublished record visible in Portal if related name is published
- Hi Henning, this is fixed. Please review after the release if it is also working in the production system.
- 11:54 AM Revision 0868ab9a (cdmlib): ref #8328 improving permission check in NameController and fixing check in RegistrationController
- 11:42 AM Revision 707cb8bc (cdmlib): ref #8328 hiding name relations with names for unpublished registrations from webservice response
- 09:35 AM Revision 29b5ec26 (taxeditor): add IRereferencingObjectsView interface
03/17/2020
- 06:44 PM bug #8894 (In Progress): fix jenkins job cdm-server_trigger_remote-INSTALL
- 06:43 PM bug #8894: fix jenkins job cdm-server_trigger_remote-INSTALL
- From reading the Jenkins issues
* https://issues.jenkins-ci.org/browse/JENKINS-61375
* https://issues.jenkins-ci.... - 08:50 AM bug #8894 (Closed): fix jenkins job cdm-server_trigger_remote-INSTALL
- the job cdm-server_trigger_remote-INSTALL when triggering the remote job via the *Parameterized Remote Trigger Plugin...
- 05:46 PM bug #7766 (Closed): Remaining issues for using relationship DTO webservice in portal
- Andreas Kohlbecker wrote:
> The sort order seem to have problems. Is this an regression or has this point be missed?... - 05:32 PM Revision 5c750190 (cdm-dataportal): ref #7766 order taxon relationships by type and scientific name, adapting tests
- 02:20 PM feature request #8867 (Closed): media list services as iiif manifest service
- above mentioned problems (comment 5) are solved.
Closing this issue. - 01:15 PM Revision c0667822 (cdmlib): ref #6970 fixing NPE
- 10:22 AM task #5083 (Closed): Alternative image viewer for dataportal
- All remaning open issues solved.
Furhter tasks related to the UV will be handled in a separate ticket.
- 10:18 AM feature request #8895 (Closed): Specimen page: show specimen description as continuous text
- For the taxon profile page the function `render_description_string($description, $root_nodes, &$item_cnt = 0) ` is be...
- 10:03 AM feature request #6878: choose a base font for the portal and deliver it from the drupal module or theme
- In den letzten 26 Tagen wurden 4 Stimmen abgegeben, alle mit positivem Votum für die Noto Sans.
Damit ist diese Find...
03/16/2020
- 06:01 PM task #8835: DISCUSS if the UPDATE & DELETE permission stategy should become a general principle in the cdmlib
- I implemented the group `Editor-Reference` for issue #8836, but we may decide to remove the group again depending on ...
- 05:58 PM bug #8836 (Closed): add default role Editor-Reference (REFERENCE.[UPDATE,DELETE], TEAMORPERSONBASE.[UPDATE,DELETE])
- I now implemented this group. We may decide removing this group again depending on the outcome of the discussion in #...
- 05:56 PM bug #8836 (Resolved): add default role Editor-Reference (REFERENCE.[UPDATE,DELETE], TEAMORPERSONBASE.[UPDATE,DELETE])
- Applied in changeset commit:cdmlib|1dd5b326e489c3a7a9a945109a077f8f1293d1d5.
- 04:24 PM bug #8836 (In Progress): add default role Editor-Reference (REFERENCE.[UPDATE,DELETE], TEAMORPERSONBASE.[UPDATE,DELETE])
- 05:56 PM Revision 1dd5b326 (cdmlib): fix #8836 group Editor-Reference implemented (see also ref #8835)
- 04:12 PM bug #8833: distribution editor: Exception when filtering by taxon
- moving this ticket to the same target version as #8834
- 04:11 PM bug #8154 (Worksforme): NameController.doGetTaggedName fails due to [UPDATE] not permitted for 'anonymousUser' on Person
- I can't reproduce this at the moment and there are no such Exceptions in the last server log
- 01:50 PM bug #8427 (Closed): LazyInitializationException in NameController.doGetTaggedFullTitle()
- fixed, as http://test.e-taxonomy.eu/cdmserver/cichorieae/name/0cdfee83-aa6a-4a22-a8dc-368781e7ddf2/taggedFullTitle no...
- 12:35 PM bug #8427 (Resolved): LazyInitializationException in NameController.doGetTaggedFullTitle()
- Applied in changeset commit:cdmlib|098b423fcbcd5f4efd7aaaa6b5e51439a9d2bcc9.
- 11:21 AM bug #8427 (In Progress): LazyInitializationException in NameController.doGetTaggedFullTitle()
- this is reproducible on the test server:
* http://test.e-taxonomy.eu/cdmserver/cichorieae/name/ddf9cc53-cdfc-45d5-... - 12:35 PM Revision 098b423f (cdmlib): fix #8427 fixing init strategy for references and authorship
- 11:03 AM bug #8866 (Closed): LazyInitializationException (LIE) in portal/taxon/{uuid}
- issue is fixed, this is confirmed by the fact that the LIE no longer occures: http://test.e-taxonomy.eu/cdmserver/car...
- 09:40 AM bug #8866 (Resolved): LazyInitializationException (LIE) in portal/taxon/{uuid}
- Applied in changeset commit:cdmlib|7e76406ea76d8a95b7cbb718f23970cb7581443a.
- 09:56 AM feature request #8890 (Resolved): Allow multiselection for open_in menu
- please review for name editor, taxon node wizard, classification wizard and distribution editor.
- 09:54 AM feature request #8893 (New): Multi select for open in bulk editor
- follow up from #8890:
in taxon navigator the dynamic menu is also available for multi select, but the implementati... - 09:52 AM Revision 924cc33b (taxeditor): ref #8890: handle dynamic menu for ref objects view and taxonnode wizard correctly
- 09:39 AM Revision 7e76406e (cdmlib): fix #8866 fixing incorrect bean initialization which has been indruduced during ref #7745
03/13/2020
- 02:02 PM Revision 8dd22643 (cdmlib): ref #8892: add missing comparator
- 01:14 PM bug #8892: Taxon search does not work for names without rank
- please review
- 01:10 PM bug #8892 (Resolved): Taxon search does not work for names without rank
- Applied in changeset commit:cdmlib|44deb132b6744b0a92b419fef363a9f98c543af0.
- 01:01 PM bug #8892 (Closed): Taxon search does not work for names without rank
- Searching for taxa by titleCache fails for taxa having a name without a rank.
The hql query with "SELECT ... , name... - 01:06 PM Revision 44deb132 (cdmlib): fix #8892: fix problem of name without rank in taxon search
- 12:32 PM feature request #8891 (Closed): Add categorical and quantiative data to DwC-A
- this is an urgent requirmenet for FoG
03/12/2020
- 09:54 AM Revision 86627d31 (taxeditor): ref #8890: fix referencing objects view open in menu
- 09:41 AM Revision dd23c061 (taxeditor): ref #8890: fix referencing objects view open in menu
03/11/2020
- 02:19 PM Revision 8f68a26c (taxeditor): ref #8450: add label to specimen filter
- 01:28 PM bug #8552 (Resolved): Avoid DB call for matrix state DB preferences
- Applied in changeset commit:taxeditor|720c82fe2d53187c2149a7fad4081e6d639bc1a9.
- 01:28 PM Revision 720c82fe (taxeditor): fix #8552: use preference cache for loading character matrix settings
- 12:54 PM bug #8881 (Closed): Use pure last names (without initials) for in-references of taxon names
- this seems to work. Tested in nightly.
- 11:38 AM Revision 23a5eb46 (taxeditor): ref #8890: add constructor for bulkeditor input with class and uuid
- 11:28 AM Revision 963170aa (taxeditor): ref #8890: allow multiselect for open in dynamic menu
- 11:27 AM feature request #8890 (Closed): Allow multiselection for open_in menu
- For the distribution editor we needed the possibility to select more than one taxon node which should be opened in di...
- 10:32 AM Revision eb61b01b (taxeditor): minor in preferences
03/10/2020
- 03:40 PM bug #8881: Use pure last names (without initials) for in-references of taxon names
- Can you please review?
- 02:16 PM bug #8881: Use pure last names (without initials) for in-references of taxon names
- Applied in changeset commit:cdmlib|6701ae84b1f1a9266fb45fd795a5a56ba8e8ae26.
- 02:11 PM bug #8881 (Resolved): Use pure last names (without initials) for in-references of taxon names
- This is implemented now.
Only for exceptional states like protectedTitleCache, protectedNomenclaturalTitel or empt... - 02:16 PM Revision 6701ae84 (cdmlib): fix #8881 Use pure last names (without initials) for in-references of taxon names
- 02:16 PM Revision 0928b8c3 (cdmlib): cleanup
- 01:05 PM Revision 895e21ca (taxeditor): code cleaning and fix potential null pointer
- 12:58 PM Revision 033e9150 (taxeditor): remove deprecated editor manager
- 12:45 PM Revision 98c05c05 (taxeditor): minor
- 11:54 AM Revision abe2817d (taxeditor): ref #8562: clone io page to ui/navigator
- 11:45 AM bug #8562 (Resolved): Remaining issues for preference pages
- Andreas Müller wrote:
> >The general io page should contain the „Show Export/Import Menu“ of the actual „General“ pa... - 11:09 AM bug #8562: Remaining issues for preference pages
- Andreas Müller wrote:
> The Label "Acutal status selection, the area specific selection is only available for ser... - 11:00 AM Revision e5b9344b (taxeditor): ref #8562: change general to default in label of status selection pref page
- 10:15 AM bug #8824: No dirty flag when adding new factual data set
- move to 5.14
- 10:03 AM task #8635: install collectd + facette for server monitoring
- mostly done.
- 10:02 AM bug #8849: NPE in synonym DetailsViewer for synonyms without accepted taxon
- move to 5.14
- 10:02 AM bug #8860 (Resolved): Sec reference not inherited from classification anymore
- This seems to be fixed already. I tested on rem_conf_am and the new taxon has the reference of the classification as ...
- 09:56 AM bug #8431: missing status bar for cdm light export
- move to 5.14
- 09:55 AM feature request #8474: Make TermCollection.orderRelevant usable for TermTrees
- move to 5.14
- 09:54 AM feature request #8476: Implement support for TermCollection.isFlat in TaxEditor
- move to 5.14
- 09:53 AM bug #8494: Better ABCD Preferences Page
- still have a look by myself if everything is fixed.
- 09:52 AM bug #8498: Set Flags should show the current status of the flags
- move to 5.14
- 09:51 AM bug #8531 (Resolved): factual data and media view always opened when opening taxon
- this should be fixed, now.
- 09:46 AM bug #8733 (Resolved): Descriptive data set: Specimens of a newly added taxon are not listed in Select Specimen dialog of the matrix editor
- please review, if this solution already solves the problem, otherwise move the ticket to 5.14
- 09:45 AM bug #8815: Clean up TaxonNodeDto and UuidAndTitleCache usage in TaxonNodeService/Dao
- the blocker is moved to 5.14, this ticket also
- 09:36 AM bug #8839 (Closed): Role misses toString method
- changed to direct field access.
- 09:35 AM Revision 31cda96c (cdmlib): ref #8839 directly referencing the role field
- 09:32 AM task #8047 (Resolved): Remaining issues in TaxDistributionEditor
- for the missing issues created a new ticket #8889 and close this ticket.
please review. - 09:28 AM feature request #8889 (In Progress): Remaining issues for distribution editor - continue
- copied from #8047:
* In preferences translate possible configuration terms "ID in Vocabulary" => "ID im Vokabular...
03/09/2020
- 09:42 PM feature request #8888 (Closed): responsive width for universal viewer
- the width of the universal viewer should be adapted to the page width
assure the problem described in #8900 are al... - 06:20 PM task #5083 (Resolved): Alternative image viewer for dataportal
- clean urls problem solved, the universalviewer is now ready to be used in the data portal
- 01:52 PM task #5083: Alternative image viewer for dataportal
- last remaining problem:
* the universalviewer gallery does not work with drupal clean urls (ui-config.json is not ... - 06:18 PM Revision b45a8503 (cdm-dataportal): ref #5083 fixing jq-universalviewer.js for clean urls
- 05:32 PM bug #8562: Remaining issues for preference pages
- >on local pref distribution status page the selection button is not disabled if db pref does not allow override.
... - 05:07 PM bug #8562 (Feedback): Remaining issues for preference pages
- >The general io page should contain the „Show Export/Import Menu“ of the actual „General“ page.-> this preference sho...
- 05:01 PM bug #8562 (Resolved): Remaining issues for preference pages
- Applied in changeset commit:taxeditor|ecdbb425f7a58d2d969aaace4f3f47874e0e4fbf.
- 04:55 PM bug #8562: Remaining issues for preference pages
- Andreas Müller wrote:
> >Common Names => Common Name Languages (and/or, if it's too long change the label of the pag... - 04:47 PM bug #8562 (Feedback): Remaining issues for preference pages
- >Common Names => Common Name Languages (and/or, if it's too long change the label of the page to "Common Name Languag...
- 02:07 PM bug #8562 (Resolved): Remaining issues for preference pages
- two issues are postponed (#8039) and the specimen features, but the rest should be fixed.
- 05:24 PM bug #8887 (New): New issues for preference pages
- Bugs:
* Distribution Data-Status: when opening the status dialog via the table the select area button is not disab... - 05:03 PM feature request #8624 (Resolved): Add abbrev title cache to search in bulk editor
- 04:52 PM feature request #8624 (Feedback): Add abbrev title cache to search in bulk editor
- Andreas Müller wrote:
> For me it still does not work. As soon as my search contains any part of the fulltitlecache ... - 04:51 PM feature request #8624 (Resolved): Add abbrev title cache to search in bulk editor
- Applied in changeset commit:taxeditor|a17b1bfce808174323c58b7cad023ce991d69ef0.
- 03:06 PM feature request #8624 (Feedback): Add abbrev title cache to search in bulk editor
- For me it still does not work. As soon as my search contains any part of the fulltitlecache I get no result. E.g sear...
- 10:47 AM feature request #8624 (Resolved): Add abbrev title cache to search in bulk editor
- I added the fulltitleCache to the search for taxon names in bulk editor. I will create a new ticket for the more deta...
- 05:00 PM Revision ecdbb425 (taxeditor): fix #8562: label issue
- 04:55 PM bug #8879 (Resolved): strange file name for export file
- Applied in changeset commit:taxeditor|d86ec22054b1e98d18820c73dd8cd94a11c08585.
- 03:11 PM bug #8879 (Feedback): strange file name for export file
- Almost perfect. Now we have 202003091510-DWCA_EXPORT_export_rem_conf_am.zip
But still we could report the redundant ... - 12:05 PM bug #8879 (Resolved): strange file name for export file
- Applied in changeset commit:taxeditor|5bf7fbd15641ea84e387fdbef464d5146b6d308a.
- 04:55 PM Revision d86ec220 (taxeditor): fix #8879: remove export from file name
- 04:51 PM Revision a17b1bfc (taxeditor): fix #8624: adapt search manager to fulltitlecache search
- 04:11 PM feature request #8756 (Resolved): Refresh button for structure tree and property tree in Character Editor
- Now I tested on another machine and it first worked. But then I tested to change the tree on 1 machine and then refre...
- 03:19 PM task #8886 (Closed): Import Lichenes Genera
- 03:14 PM bug #8881 (In Progress): Use pure last names (without initials) for in-references of taxon names
- 03:04 PM Revision 73ee58fa (taxeditor): ref #8494: better handling of providers provided by webservice and from preference in drop down
- 02:56 PM bug #8791 (Closed): Measurement units are not assigned to quantitative data in matrix
- 09:38 AM bug #8791 (Resolved): Measurement units are not assigned to quantitative data in matrix
- Applied in changeset commit:taxeditor|3209a2511593ad18ebcdf8bfeb9ff8702da64b2a.
- 02:49 PM Revision ad938fd2 (cdmlib): ref #8044: moveTerm return updateResult and voc search is contains search
- 02:46 PM bug #8847 (Closed): Name in Source is added always when moving description from one taxon to another
- 11:36 AM bug #8847 (Resolved): Name in Source is added always when moving description from one taxon to another
- Applied in changeset commit:taxeditor|322d3caae1d8adc08a0a8ae242229e5df34113fa.
- 02:42 PM feature request #8044 (Resolved): Add "Move to..." menu to term editor
- 02:41 PM feature request #8044: Add "Move to..." menu to term editor
- Andreas Müller wrote:
> Terms and vocabularies are not clearly distinguished now in the search dialog. Especially be... - 02:40 PM feature request #8885 (New): Distinguish between terms and vocabularies in term search dialog
- from #8044:
Terms and vocabularies are not clearly distinguished now in the search dialog. Especially because voca... - 02:38 PM Revision bc6f4f4e (taxeditor): ref #8044: handle update result of moveTerm correctly
- 02:07 PM bug #8830 (Closed): add missing spaces to statistical value representations
- on the page linked above as example, it now looks like:
~~~
0 m [2]
~~~
so i am closing this issue. - 02:05 PM bug #8830 (Resolved): add missing spaces to statistical value representations
- sehe ich auch so und habe den code entsprechend geändert: commit:cdm-dataportal|3603b96e
- 02:05 PM Revision 694478ab (taxeditor): ref #8562: ui issues in preferences
- 02:04 PM Revision 3603b96e (cdm-dataportal): ref #8830 statistical values: unit before brackets
- 01:51 PM feature request #8884 (Rejected): iiif manifest service: enrich metadata with information provided by other iiif image servers
- copied from #8867
The service should enrich the manifest with metadata stored within the images. Metadata for ... - 01:45 PM feature request #8883 (New): additional media list services as iiif manifest service
- for details see #8867
**Services TODO**
* `/portal/taxon/{uuid}/media` -> `/iiif/taxon/{uuid}/manifest.json` ... - 01:41 PM Revision b1c11ab3 (cdmlib): ref #8867 extending taxon manifest by includeTaxonomicChildren parameter
- 01:40 PM Revision 172bb491 (cdm-dataportal): ref #5083 using includeTaxonomicChildren iiif taxon media service mode
- 12:32 PM Revision dde81daa (cdm-dataportal): ref #5083 adding developer utility script
- 12:30 PM Revision 4a462641 (cdm-dataportal): ref #5083 using iif taxon manifest service in dataportal
- 12:27 PM Revision 86b41121 (cdmlib): ref #8867 better presentation of licenses, copyright and access right
- 12:05 PM Revision 5bf7fbd1 (taxeditor): fix #8879: add only name of datasource without server to export file name
- 11:38 AM bug #8882 (New): adapt search to handle protected or not protected titleCaches
- from #8624:
Does not yet work for TaxonName.fullTitleCache though the fulltitlecache seems to be the one that is sho... - 11:36 AM Revision 322d3caa (taxeditor): fix #8847: adapt labels for set name in source operations
- 10:51 AM Revision 1e97edc1 (cdmlib): ref #8624: add search on fulltitleCache
- 10:46 AM feature request #7793 (Closed): Master ticket for E+M editor issues
- No this was a mistake, we can close this ticket, I missed to set the filter to 5.13.
- 10:45 AM feature request #7793: Master ticket for E+M editor issues
- I don't understand why this was moved from 5.4 to 5.14. This ticket has a follow up ticket #7860 which includes all(?...
- 10:19 AM bug #8385 (Closed): Open issues in DB preferences
- Andreas Müller wrote:
> can you move open issues to #8489?
This is done, therefore I close this ticket.
- 09:38 AM Revision 3209a251 (taxeditor): fix #8791: set unit when only one unit is possible
- 08:24 AM Revision 49805fb2 (cdmlib): ref #8867 showing licenses also in manifest attributions
03/07/2020
03/06/2020
- 06:17 PM Revision 423442a0 (cdmlib): ref #8867 dedicated handling of rights and credits
- 04:38 PM bug #8881 (Closed): Use pure last names (without initials) for in-references of taxon names
- 03:52 PM bug #8830: add missing spaces to statistical value representations
- NK:
ja sehe ich auch so, die Probenzahl in eckiger Klammer muss hinter dem Wert und seiner Einheit stehen - 03:46 PM bug #8830: add missing spaces to statistical value representations
- Example with n=2 at http://test.e-taxonomy.eu/dataportal/preview/cyprus/cdm_dataportal/taxon/0f8d18a9-e861-48e8-bfab-...
- 03:23 PM bug #8830 (Feedback): add missing spaces to statistical value representations
- The original issue of this ticket is correctly fixed.
But I did realize during review that now results look like: ... - 03:46 PM bug #8828 (Closed): statistical values must not show empty brackets
- seems to be fully fixed, but there is a related open issue at #8830#note-5
- 03:04 PM feature request #8861 (Closed): Sorted feature states
- Works as expected.
- 09:53 AM feature request #8861 (Resolved): Sorted feature states
- Applied in changeset commit:taxeditor|ceb614de4edfb66745fd81ac7edb69d80a7874a0.
- 03:01 PM bug #8880 (New): No classification parameter selected for DwC-A export
- ... if export is not called on a specific classification:
Always 1 alternative should be ... - 02:39 PM bug #8879 (Feedback): strange file name for export file
- Better but still a problem exists. Now the name looks like
202003061436-DWCA_EXPORT_export-edit-test/rem_conf_am.z... - 12:03 PM bug #8879 (Resolved): strange file name for export file
- please review
- 12:02 PM bug #8879 (Closed): strange file name for export file
- The default file name for an export file contains the last used local_mgd datasource not the actual datasource name.
- 02:34 PM bug #8784: Deleting a specimen description not possible
- This is fixed.
I do not close the ticket yet as the last issue (cleaning up production data from caryo spp) needs ... - 02:31 PM bug #8782 (Closed): Delete a description included in a CdmSource should not be possible
- Sorry, I was wrong, the test record was referenced by both DDS and CdmLinkSource.
No I tested with only linking to... - 02:29 PM bug #8782 (Feedback): Delete a description included in a CdmSource should not be possible
- Now it is not possible anymore to delete a specimen description which is referenced by an OriginalSource.
Open iss... - 02:11 PM bug #8785 (New): Move functionality of buttons to context menu of the character matrix
- Katja Luther wrote:
> removing of a specimen description from a descriptive dataset works in character matrix by sel... - 01:41 PM bug #8791: Measurement units are not assigned to quantitative data in matrix
- Ahh, it seems to work, if I have to explicitly select from a list of multiple units (if >1 units are attached to the ...
- 01:38 PM bug #8791 (Feedback): Measurement units are not assigned to quantitative data in matrix
- Data does not seem to be saved yet.
In Dialog the unit appears
In the matrix it is no... - 12:42 PM bug #8847: Name in Source is added always when moving description from one taxon to another
- #4 and #5 are solved
- 12:03 PM Revision 56873306 (cdmlib): ref #8867 adding image amd cdm media metadata to the manifest
- 12:02 PM feature request #8852: Improve TaxEditor startup options
- WGB:
ich würde gerne shortcuts ablegen – aber im Prinzip ist es das gleiche Poweruser-Problem mit verschiedenen Da... - 12:00 PM Revision fdc5c13d (taxeditor): fix file name for export
- 10:55 AM feature request #8756: Refresh button for structure tree and property tree in Character Editor
- Andreas Müller wrote:
> It still does not work for me. In rem_conf_am I added a 3. term to Structure tree "Test" via... - 10:25 AM Revision f7112c5f (taxeditor): ref #8847: fix move description with setting name in source for navigator
- 10:11 AM Revision ac712404 (taxeditor): add default comparator to all term combos without own comparator
- 09:52 AM Revision ceb614de (taxeditor): fix #8861: case insensitive string comparison for term comparator
03/05/2020
- 04:25 PM bug #6970: MediaUtils.filterAndOrderMediaRepresentations perfers thumbnail MediaRepresentations over full sized
- closing as all tests succeed
- 04:25 PM bug #6970 (Closed): MediaUtils.filterAndOrderMediaRepresentations perfers thumbnail MediaRepresentations over full sized
- 04:24 PM bug #7093 (Worksforme): choosing representation which best fits the available size for taxon profile picture not working in all cases
- I could not reproduce this issue with the test cases implemented in commit:84331f40
A research in the old emails did... - 04:00 PM bug #7093 (In Progress): choosing representation which best fits the available size for taxon profile picture not working in all cases
- 12:36 PM bug #7093: choosing representation which best fits the available size for taxon profile picture not working in all cases
- Ok, I will test with these sizes ....
- 12:34 PM bug #7093: choosing representation which best fits the available size for taxon profile picture not working in all cases
- Andreas Kohlbecker wrote:
> Andreas Müller wrote:
> > Andreas Kohlbecker wrote:
> > > Thank you for pointing this ... - 12:32 PM bug #7093: choosing representation which best fits the available size for taxon profile picture not working in all cases
- Andreas Müller wrote:
> Andreas Kohlbecker wrote:
> > Thank you for pointing this out.
> > Have only the thumbnai... - 12:28 PM bug #7093: choosing representation which best fits the available size for taxon profile picture not working in all cases
- Andreas Kohlbecker wrote:
> Thank you for pointing this out.
> Have only the thumbnails been adapted or also the l... - 12:26 PM bug #7093 (Feedback): choosing representation which best fits the available size for taxon profile picture not working in all cases
- Thank you for pointing this out.
Have only the thumbnails been adapted or also the large images? Do you know more a... - 12:03 PM bug #7093: choosing representation which best fits the available size for taxon profile picture not working in all cases
- Andreas Kohlbecker wrote:
> Andreas Kohlbecker wrote:
> > This is a duplicate of the issue #6970
>
> Not really,... - 11:24 AM bug #7093 (Worksforme): choosing representation which best fits the available size for taxon profile picture not working in all cases
- Andreas Kohlbecker wrote:
> This is a duplicate of the issue #6970
Not really, since the problem in #6970 is exac... - 11:20 AM bug #7093 (Duplicate): choosing representation which best fits the available size for taxon profile picture not working in all cases
- This is a duplicate of the issue #6970
- 03:57 PM feature request #8756 (Feedback): Refresh button for structure tree and property tree in Character Editor
- It still does not work for me. In rem_conf_am I added a 3. term to Structure tree "Test" via Structre Tree Editor but...
- 03:57 PM Revision 84331f40 (cdmlib): ref #6970 fixing bug related to undefined values and adding test for ref #7093
- 03:47 PM feature request #8044: Add "Move to..." menu to term editor
- Please decide what can/should be fixed now and what better will be fixed after refactoring the term editors.
- 03:46 PM feature request #8044: Add "Move to..." menu to term editor
- Terms and vocabularies are not clearly distinguished now in the search dialog. Especially because vocabularies are sh...
- 03:44 PM feature request #8044: Add "Move to..." menu to term editor
- Andreas Müller wrote:
> When moving a term to another parent which is part of another vocabulary the term disappears... - 03:43 PM feature request #8044: Add "Move to..." menu to term editor
- When moving a term to another parent which is part of another vocabulary the term disappears in the UI. Only closing ...
- 03:36 PM feature request #8044: Add "Move to..." menu to term editor
- Pressing cancel results in a warning "you have to select one single term". Cancel should not generate warning as noth...
- 03:33 PM feature request #8044 (Feedback): Add "Move to..." menu to term editor
- Vocabulary search is an exact search now while term search is a "contains"-search. The later is what is more expected...
- 03:25 PM feature request #8749 (Closed): Add proposalProvider to AbstractComboElement
- Takes time to test everywhere but as far as I remember from using nightly during the last weeks I do not remember a p...
- 03:19 PM feature request #8688 (Closed): Make OriginalSourceBase.cdmSource visible in TaxEditor
- I can't test for CdmBase as there is no class implementing the ICdmSource interface yet which is not identifiable.
... - 02:47 PM bug #8825 (Closed): Name features are shown in menu of factual data view of taxa when no preferences defined
- Difficult to test (and not spending too much time). But it looks like it works correctly. Reopen otherwise if users c...
- 02:43 PM feature request #8861 (Feedback): Sorted feature states
- Generally this works well. Only the sorting is currently case sensitiv which IMO should not be case.
Please decide... - 02:31 PM feature request #8624: Add abbrev title cache to search in bulk editor
- Does not yet work for TaxonName.fullTitleCache though the fulltitlecache seems to be the one that is shown in the fir...
- 02:26 PM feature request #8624 (Feedback): Add abbrev title cache to search in bulk editor
- Works well for TeamOrPersonBase and Reference.
- 02:17 PM bug #8878: Author selection dialog does not work on abbrev author title
- I assigned to 5.14 as I think correct handling of dialogues is base functionality in the meanwhile and errors should ...
- 02:16 PM bug #8878 (New): Author selection dialog does not work on abbrev author title
- I tried to select an author for a reference via Reference-Detail View-select author dialogue.
Search on authors wo... - 02:11 PM bug #8877 (New): New->Reference menu should be sorted
- in bulk editor, but currently is not:
 - 02:03 PM bug #8847: Name in Source is added always when moving description from one taxon to another
- English translation "Set name in source automatically" differs from German translation.
Also source should sources... - 01:59 PM bug #8847: Name in Source is added always when moving description from one taxon to another
- Moving with name in taxon navigator does not work. Name is not set afterwords.
- 01:49 PM bug #8847 (Feedback): Name in Source is added always when moving description from one taxon to another
- The order in the menus is not always the same. I guess move without name setting should be first, move with name sett...
- 01:43 PM Revision daffb8de (taxeditor): ref
- 01:42 PM Revision 00145989 (cdmlib): ref #6970 MediaUtils: restoring removed method
- 12:05 PM Revision c3475048 (cdmlib): revert 1bfcbbafdbce6e . Tests are still not always running.
- 11:55 AM task #8868 (Closed): Bump Jackson dependencies to >= 2.9.10.1
- 11:55 AM task #8868: Bump Jackson dependencies to >= 2.9.10.1
- this seems to be fixed.
- 11:41 AM task #8130 (In Progress): Check if related feature data is cleared when supported facts type is changed
- I think the status should be In process and we should discuss how it should be handled in general because it should b...
- 11:39 AM task #8130: Check if related feature data is cleared when supported facts type is changed
- can you please check and set the correct status for the ticket?
- 11:40 AM feature request #8862 (Closed): move search result to the bottom of the navigator part
- Seems to work
- 11:22 AM feature request #8852: Improve TaxEditor startup options
- Note: Das pwds vergessen werden, kann ich persönlich nicht nachvollziehen, obwohl ich auch mit vielen verschiedenen S...
- 11:21 AM feature request #8852: Improve TaxEditor startup options
- AK:
* 1. (Test-)Automatisierung
* 2. arbeiten mit einer cdmlib-remote-webapp instanz an http://localhost:<port>/ ... - 11:20 AM feature request #8852: Improve TaxEditor startup options
- AM:
was sind denn die Usecases um die es geht. Mein persönlicher ist, möglichst schnell eine der von mir häufig ve... - 11:20 AM feature request #8852: Improve TaxEditor startup options
- AK:
Das Passwort wird zwar im Taxeditor gespeichert aber das funktioniert nicht immer zuverlässig und nicht in all... - 11:19 AM feature request #8852: Improve TaxEditor startup options
- ich finde den Vorschlag auch interessant. Pwd bräuchte man nicht unbedingt mitgeben, dass speichert er ja automatisch...
- 11:09 AM Revision b61d8614 (cdmlib): ref #8867 iiif REST service controller correctly choosing thumbnail and fullsize resolutions
- 11:09 AM Revision eaeba65c (cdmlib): ref #6970 MediaUtils.filterAndOrderMediaRepresentations with improved algorithm
- 10:50 AM feature request #8876 (Rejected): nom. & gen. cons.
- ERS (an WGB, NK, WHK, AM, KL, Nick):
im Editor finde ich in meinem drop-down-Menü für nomenklatorische Status die ... - 10:48 AM Revision 52db4e57 (taxeditor): revert contextRefresh implementation
- 10:46 AM Revision 736d82ea (taxeditor): ref #8047: adapt column width to length of header label
- 10:27 AM Revision 69bb9d71 (taxeditor): ref #8562: add supplemental data subtree to ui part
- 10:19 AM feature request #8875 (New): Filter data portal by taxonomic rank
- For some data portal (e.g. caryophyllales genera and lichenes genera) it is a requirement to filter taxa by rank (e.g...
- 09:46 AM Revision f18e2af7 (taxeditor): ref #8047: fix handling of integer preference values
- 09:40 AM bug #8874 (Resolved): move taxon is reverted when taxon is edited afterwards
- mail W.B.:
ein merkwürdiger Bug – ist mir schon mehrfach aufgefallen, aber ich habe ihn nicht so recht dokumentier...
03/04/2020
- 02:13 PM Revision 0eb94f0f (taxeditor): ref #8868 adding jetty-security to copy dependencies
- 02:13 PM Revision 912c7f60 (taxeditor): comment on module build order
- 12:49 PM Revision e0c50456 (taxeditor): fix uuid and titleCache display
- 12:35 PM bug #6970 (In Progress): MediaUtils.filterAndOrderMediaRepresentations perfers thumbnail MediaRepresentations over full sized
- Andreas Müller wrote:
> This ticket (by description and by old title) is about handling the "no filter" case. Not su... - 11:27 AM bug #6970 (Feedback): MediaUtils.filterAndOrderMediaRepresentations perfers thumbnail MediaRepresentations over full sized
- This ticket (by description and by old title) is about handling the "no filter" case. Not sure if the new title still...
- 10:21 AM bug #6970: MediaUtils.filterAndOrderMediaRepresentations perfers thumbnail MediaRepresentations over full sized
- This issue is due to problems in the algorithm implemented in `MediaUtils.filterAndOrderMediaRepresentations()`. The...
- 10:26 AM feature request #8867 (In Progress): media list services as iiif manifest service
- 08:18 AM Revision ef302cd8 (taxeditor): fixing potential NPE
- 08:11 AM Revision add676c0 (taxeditor): ref #8868 adding jetty-io to plugin
- 08:07 AM Revision 088ca9bf (taxeditor): ref #8868 adding jetty-http to plugin
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