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From 02/03/2020 to 03/03/2020

03/03/2020

05:20 PM Revision 1bfcbbaf (cdmlib): unignore StructuredDescriptionAggregationTest to test
... if this was really the reason for tests failing from time to time Andreas Müller
04:19 PM task #5022 (Closed): Check for dependencies from codehaus.org
Andreas Kohlbecker
04:17 PM task #5022: Check for dependencies from codehaus.org
even if commented the CodehausMuleRepository can be removed. `yjp-controller-api-redist@2015-build-15086` is availabl... Andreas Kohlbecker
02:12 PM task #5022 (Feedback): Check for dependencies from codehaus.org
As this code is commented since 2015 I did not consider it as a real repository definition. It does not contradict "A... Andreas Müller
04:18 PM Revision 907243b7 (cdmlib): ref #5022 removing commented CodehausMuleRepository
Andreas Kohlbecker
02:49 PM Revision 3cb4daac (taxeditor): update navigator after import
Katja Luther
02:33 PM Revision 75784d91 (cdmlib): using https for jboss repo
Andreas Kohlbecker
02:17 PM Revision 5e4edfe4 (cdmlib): updating jboss repo to new location: repository.jboss.org
Andreas Kohlbecker
12:50 PM Revision 14a8f9d9 (cdmlib): ref #5022 remove spring repositories
Andreas Müller
12:50 PM Revision cc2aa0f9 (cdmlib): ref #5022 remove (commented) itextpdf repository
Andreas Müller
12:50 PM Revision 6954c32f (cdmlib): cleanup
Andreas Müller
12:50 PM Revision ad22fcb8 (cdmlib): add transaction to state in ExcelImportBase
Andreas Müller
12:49 PM Revision 931981a7 (cdmlib): add some user types to noHandle for referencingObjects search
Andreas Müller
12:49 PM Revision 6c9ddf58 (cdmlib): cleanup
Andreas Müller
12:03 PM Revision fe6bf49c (taxeditor): ref #8047: code cleaning
Katja Luther
11:59 AM Revision f858de14 (taxeditor): avoid NPE and code cleaning
Katja Luther
11:54 AM Revision 7ef1ca71 (taxeditor): ref #8047: status order in drop down - continue
Katja Luther
11:54 AM Revision 44f3402d (taxeditor): fix open classification handler
Katja Luther
11:38 AM Revision 0eccefea (taxeditor): ref #8047: status order in drop down
Katja Luther
11:38 AM Revision ec05977a (cdmlib): ref #8047: add preferencePredicate for status order
Katja Luther
11:09 AM Revision b4801728 (cdmlib): fixing multiple bugs which have been reported by SpotBugs
Andreas Kohlbecker
10:28 AM Revision 33d62613 (cdm-server): ref #8868 upgrading to jetty 9.4.26.v20200117
Andreas Kohlbecker

03/02/2020

09:43 PM task #5022 (In Progress): Check for dependencies from codehaus.org
There are still the repository definition in cdmlib/pom.xml:
~~~
./pom.xml-227- <name>JBoss Repository</na...
Andreas Kohlbecker
02:38 PM task #5022 (Closed): Check for dependencies from codehaus.org
Andreas Müller
02:38 PM task #5022: Check for dependencies from codehaus.org
Andreas Kohlbecker wrote:
> itextpdf/5.0.6 has the AGPL3 license which is a free license https://mvnrepository.com/a...
Andreas Müller
02:06 PM task #5022: Check for dependencies from codehaus.org
itextpdf/5.0.6 has the AGPL3 license which is a free license https://mvnrepository.com/artifact/com.itextpdf/itextpdf... Andreas Kohlbecker
09:25 PM task #8868 (Feedback): Bump Jackson dependencies to >= 2.9.10.1
waiting for Katja checking the if the last problem in the taxeditor project is caused by something else:
Eigentlic...
Andreas Kohlbecker
01:47 PM task #8868 (In Progress): Bump Jackson dependencies to >= 2.9.10.1
Andreas Kohlbecker
06:16 PM Revision 2174ddff (taxeditor): ref #8868 configuring jetty-maven-plugin to support packaging 'ecl...
Andreas Kohlbecker
06:15 PM bug #8873 (Closed): eu.etaxonomy.taxeditor: maven-clean runs before maven-install-plugin and del...
Andreas Kohlbecker
04:57 PM bug #8873: eu.etaxonomy.taxeditor: maven-clean runs before maven-install-plugin and deletes the ...
build with maven 3.6.0
~~~
[INFO] ----------------< eu.etaxonomy:eu.etaxonomy.taxeditor >-----------------
[INFO...
Andreas Kohlbecker
04:49 PM bug #8873 (In Progress): eu.etaxonomy.taxeditor: maven-clean runs before maven-install-plugin an...
Andreas Kohlbecker
04:48 PM bug #8873: eu.etaxonomy.taxeditor: maven-clean runs before maven-install-plugin and deletes the ...
Jenkins fails with the same error when http://int.e-taxonomy.eu/jenkins/job/taxeditor-INTEGRATION/ is build with mave... Andreas Kohlbecker
04:42 PM bug #8873: eu.etaxonomy.taxeditor: maven-clean runs before maven-install-plugin and deletes the ...
my local environment:
~~~
Apache Maven 3.6.0
Maven home: /usr/share/maven
Java version: 1.8.0_131, vendor: Orac...
Andreas Kohlbecker
04:39 PM bug #8873 (Closed): eu.etaxonomy.taxeditor: maven-clean runs before maven-install-plugin and del...
this does happen when running `mvn install` locally, strangly this seems not to be a problem for the http://int.e-tax... Andreas Kohlbecker
05:36 PM Revision 959179bc (taxeditor): ref #8868, ref #8873 fixing build lifecycle for maven 3.6.*
Andreas Kohlbecker
03:50 PM bug #8866: LazyInitializationException (LIE) in portal/taxon/{uuid}
Andreas Müller wrote:
> The above error leads to the message "taxon does not exist" in the dataportal. This is incor...
Andreas Kohlbecker
03:47 PM bug #8866: LazyInitializationException (LIE) in portal/taxon/{uuid}
The above error leads to the message "taxon does not exist" in the dataportal. This is incorrect error handling. The ... Andreas Müller
03:39 PM Revision 5c3f2528 (taxeditor): ref #8868 managing jetty-version as property from parent pom v=9.4...
Andreas Kohlbecker
03:20 PM bug #8872 (New): TermEditor does not use selected language
When e.g. selecting Russion as preferred language the term editor still shows terms in English while the details view... Andreas Müller
03:14 PM bug #8417: LazyInitializationException in TermDTO for media
This needs to be discussed. Eager Loading is generally very critical for 1:n relations as objects may be duplicated.
...
Andreas Müller
02:22 PM Revision aea75171 (taxeditor): ref #8868 updating jetty to 9.4.26.v20200117
Andreas Kohlbecker
02:11 PM task #8679 (Closed): Further unify description aggregation methods
Open issues moved to new ticket #8871 Andreas Müller
02:08 PM task #8871 (New): Remaining issues to unify description aggregation methods
Copied from #8679
* merge source handling
* discuss dataset handling for distribution aggregation (DONE for Descr...
Andreas Müller
01:59 PM bug #8839 (Feedback): Role misses toString method
Andreas Müller
01:55 PM bug #8815 (In Progress): Clean up TaxonNodeDto and UuidAndTitleCache usage in TaxonNodeService/Dao
Andreas Müller
01:30 PM bug #8870 (New): UI issues for term translation wizard
* delete button beside drop down
* drop down as wide as the text field
* to be continued
Katja Luther
01:12 PM feature request #8869 (New): Multilanguage Support for terms in editor
mail AM:
Anders als bei z.B. textual Facts ist es bei den Termen nicht möglich, sofort eine nicht-englische Repres...
Katja Luther
10:37 AM Revision 029ea231 (taxeditor): ref #8868 updating jetty to 9.2.9.v20150224
Andreas Kohlbecker

02/29/2020

12:22 PM feature request #8867: media list services as iiif manifest service
Open issues:
* Only thumbnail images in the manifest. This is caused by `TaxonPortalController.getMediaForTaxon(.....
Andreas Kohlbecker
12:07 PM Revision 2340b64f (cdmlib): ref #8867 basic implementation of iiif REST service controller
Andreas Kohlbecker
10:41 AM Revision cec7510d (cdmlib): ref #8868 & ref #5083 bumping jackson to 2.10.2
Andreas Kohlbecker
10:29 AM task #8868: Bump Jackson dependencies to >= 2.9.10.1
The maven-jetty plugins in `cdmlib-remote-webapp` and in `cdm-vaadin` are on `9.4.15.v20190215` Andreas Kohlbecker
10:26 AM task #8868: Bump Jackson dependencies to >= 2.9.10.1
Andreas Kohlbecker wrote:
> **IMPORTANT:** the newer jackson jars are JEP-238 Jar, therefore it is needed to upgrade...
Andreas Kohlbecker
10:24 AM task #8868: Bump Jackson dependencies to >= 2.9.10.1
**IMPORTANT:** the newer jackson jars are JEP-238 Jar, therefore it is needed to upgrade all usages of Jetty to 9.4.9... Andreas Kohlbecker
10:21 AM task #8868 (Closed): Bump Jackson dependencies to >= 2.9.10.1
Currently we are using v2.6.5 which has multiple highly severe security issues: https://github.com/cybertaxonomy/cdml... Andreas Kohlbecker

02/28/2020

05:18 PM feature request #8867 (Closed): media list services as iiif manifest service
for providing universalviewer with manifest files (see #5083) all services returning media lists like `portal/taxon/{... Andreas Kohlbecker
05:02 PM Revision 9b614b06 (cdm-dataportal): ref #5083 cleaning up
Andreas Kohlbecker
04:47 PM Revision a6f91032 (cdm-dataportal): ref #5083 universalviewer modules setup and layout
Andreas Kohlbecker
03:22 PM Revision 794a8f08 (cdmlib-apps): implement commandline TreeIndexUpdaterActivator
Andreas Müller
02:44 PM Revision a1f7edc0 (cdm-dataportal): ref #5083 integrating universalviewer as jQuery plugin
Andreas Kohlbecker
01:41 PM task #8853 (Resolved): Import Aizoaceae from Kew World Checklist to Caryo spp
Applied in changeset commit:cdmlib-apps|26f92af1e605055a6917725ec2b6a81808e7467a. Andreas Müller
01:40 PM Revision c46cd1b0 (cdmlib-apps): some change
Andreas Müller
10:55 AM bug #8866 (Closed): LazyInitializationException (LIE) in portal/taxon/{uuid}

http://api.cybertaxonomy.org/caryophyllales_spp/portal/taxon/b15ec01d-b909-4143-b197-e752b6f34d5b.json?subtree=876a...
Andreas Kohlbecker
10:11 AM feature request #8865: more external-links to be implemented
Hallo,

zusätzliche Treffer anzuzeigen, die nicht dem eigentlichen Interesse des Nutzers entsprechen ist viel ...
Andreas Kohlbecker
10:11 AM feature request #8865: more external-links to be implemented
Hallo Andreas,
Sehr gut. Bezueglich der namensbasierten Suche, liegen da schon Erfahrungen vor? Mit Einbeziehung d...
Andreas Kohlbecker
10:11 AM feature request #8865: more external-links to be implemented
Die Anforderung "Die Suche sollte dabei über die Namen gehen" heißt, dass eine namensbasierte Suche stattfinden soll.... Andreas Kohlbecker
09:56 AM feature request #8865 (New): more external-links to be implemented
Hallo Andreas,

wie im Caryophyllales-Portal, möchten wir auch im neuen E+M-Portal gerne ein Sidebar mit exter...
Andreas Kohlbecker
10:05 AM feature request #7416: OriginalSourceBase.links should be shown in DataPortal
Andreas Kohlbecker wrote:
> First of all we need to discuss how and where the links are to be shown.
>
> * in the...
Andreas Müller
09:52 AM feature request #7416: OriginalSourceBase.links should be shown in DataPortal
First of all we need to discuss how and where the links are to be shown.
* in the sidebar, e.g. in the external li...
Andreas Kohlbecker

02/27/2020

08:13 PM Revision 51dcb6fb (cdmlib): fix abcd import with missing collectorsFieldNumber - continue
Katja Luther
02:24 PM task #8047: Remaining issues in TaxDistributionEditor
Katja Luther wrote:
> * Sort status in drop down alphabetically
>
> I think a few weeks ago we decided to sort th...
Andreas Müller
01:46 PM task #8047: Remaining issues in TaxDistributionEditor
* Sort status in drop down alphabetically
I think a few weeks ago we decided to sort the status by the id in Vocab...
Katja Luther
01:15 PM Revision 5b5a0393 (cdmlib): fix abcd import for missing collectorsFieldNumber
Katja Luther
01:12 PM Revision 0017e5a7 (cdmlib): ref #8047: add preferencePredicate NUmberOfStatus
Katja Luther
12:53 PM Revision 1e4fc9a9 (taxeditor): ref #8047: add preference for number of visible status in drop dow...
Katja Luther
12:52 PM Revision 8cf9ef9f (taxeditor): ref #8047: add preference for number of visible status in drop down
Katja Luther
11:28 AM Revision c822b3aa (taxeditor): ref #8047: missing WorkbenchEventConstants changes
Katja Luther
10:57 AM Revision f47160a6 (taxeditor): ref #8047: show taxon name in details - continue
Katja Luther
10:23 AM Revision 51270199 (taxeditor): ref #8047: show taxon name in details
Katja Luther

02/26/2020

01:17 PM bug #8174: First test fails if term data is in loaded DataSet
I think we should go for option 3) that is to remove TestingTermInitializer and to rely only on the Datasets being lo... Andreas Kohlbecker
11:56 AM task #8834: use TaxonNodeDto instead of UuidAndTitleCache
Please also have a look to #8833 and adapt the related code accordingly. Also check if #8833 can be closed afterwards. Andreas Müller
11:45 AM bug #6241: fix java doc problems in projects
we split this ticket to split workload => #8864 Andreas Müller
11:44 AM bug #8864 (New): fix java doc problems in projects in vaadin, cdmserver and dataportal
for futher information see #6241 Andreas Müller
11:02 AM Revision 05b66422 (taxeditor): disabling details for distribution editor
Katja Luther
10:18 AM Revision 68c216b6 (taxeditor): code cleaning
Katja Luther
10:16 AM Revision 68278258 (taxeditor): ref #8047: avoid NPE in filter
Katja Luther
10:14 AM Revision 7015f9f1 (taxeditor): use uuid instead of entities for specimen selection
Katja Luther
10:13 AM Revision 880c592f (taxeditor): show abbrev title in agent bulk editor
Katja Luther
10:12 AM Revision b6f0f1ad (taxeditor): code cleaning
Katja Luther
10:05 AM Revision 1c7218c8 (taxeditor): ref #8047: adapt menu item for multi select
Katja Luther
10:03 AM Revision 7953b892 (taxeditor): avoid potential NPE
Katja Luther
09:51 AM Revision 53dde875 (cdmlib): ref #8047: open list of taxa in distribution editor
Katja Luther
09:44 AM Revision 0c3b1419 (taxeditor): correct handling of checklist perspective preference - continue
Katja Luther
09:25 AM Revision 2d8cbf51 (taxeditor): correct handling of checklist perspective preference
Katja Luther
09:10 AM Revision a093f2b1 (taxeditor): ref #8047: improve handling of factual data view when switching views
Katja Luther
09:04 AM Revision 466d5ea5 (taxeditor): ref #8047: allow multiselect for open distribution editor - continue
Katja Luther

02/25/2020

03:19 PM EDIT Platform Etablierung task #8863 (New): Create full documentation on multilingual setup of the Data Portal
The documentation can be based on the information found in #5911, [[edit:CdmDataportalMultilingual]], ... Andreas Kohlbecker
02:58 PM Revision 97014a35 (cdm-dataportal): adding translation file for russian
Andreas Kohlbecker
12:21 PM Revision 884aefac (taxeditor): ref #8047: allow multiselect for open distribution editor
Katja Luther
12:15 PM Revision ab40ab80 (taxeditor): ref #8047: handling of factual data view when switching between na...
Katja Luther
10:54 AM Revision 9b792c34 (taxeditor): smaller changes in distribution aggregation ui
Katja Luther
10:29 AM feature request #8861 (Resolved): Sorted feature states
Applied in changeset commit:taxeditor|6dc61e9186aa6d2657c56d87e6a394c306330dfd. Katja Luther
09:56 AM feature request #8861 (Closed): Sorted feature states
mail AM.
ich gebe gerade testweise States für das Feature Status in die Flora Greece ein und sehe, dass die Liste ...
Katja Luther
10:29 AM Revision 6dc61e91 (taxeditor): fix #8861: sort terms in state combo
Katja Luther
10:20 AM feature request #8862 (Resolved): move search result to the bottom of the navigator part
Applied in changeset commit:taxeditor|ffcad03f739ca3035437e895aaea9f28b7a4a595. Katja Luther
10:16 AM feature request #8862 (Closed): move search result to the bottom of the navigator part
Katja Luther
10:20 AM Revision ffcad03f (taxeditor): fix #8862: move search window to the bottom of the navigator
Katja Luther

02/24/2020

05:09 PM bug #8860 (Closed): Sec reference not inherited from classification anymore
When adding a (root) child node to a classification it used to be that the sec reference for the new taxon was taken ... Andreas Müller
03:22 PM feature request #8163 (Rejected): RegistrationService.setStatus() method implemented
since #7528 is solved and setting of the status is working completely, this issue no longer seems relevant, therefore... Andreas Kohlbecker
02:45 PM feature request #8163: RegistrationService.setStatus() method implemented
is thsi ready? Andreas Müller
02:30 PM task #5083 (In Progress): Alternative image viewer for dataportal
Andreas Kohlbecker
01:50 PM bug #8859 (New): RegistrationItemNameAndTypeButtons invalid regex pattern

Hallo,

Letzte Aktion: Gattung Torquedinium ausgewählt, NameType editor ausgewählt, dort original designatio...
Andreas Kohlbecker
01:44 PM bug #8858 (New): Ordering of distribution status 'undefined' is not correct in E+M
AM
guter Hinweis. Grundsätzlich hat das nicht mit der Transmission-Engine zu tun, sondern mit der on-the-fly Berec...
Andreas Müller
01:40 PM feature request #6878: choose a base font for the portal and deliver it from the drupal module or...
Hallo Andreas,

Noto!

Schönen Gruß
Ralf

Andreas Kohlbecker
11:04 AM bug #8856: Exception when setting sec reference in navigator menu with open name editor
This is not related to setting the sec reference but it is a general issue when using the taxon navigator context menu. Andreas Müller
09:13 AM bug #8856 (New): Exception when setting sec reference in navigator menu with open name editor
mail WB:
Hallo,
hatte mich geirrt, der Fehler, der mir schon ab und zu aufgefallen war, hatte nichts mit dem New-...
Katja Luther
09:46 AM bug #8857 (Closed): NonUniqueObjectException when creating new taxon
mail WB:
Hallo,
beim Anlegen eines neuen Taxons unter Chamissoa acuminiata aus dem Navigator heraus – der Fehler ...
Katja Luther

02/21/2020

06:46 PM feature request #8855 (Closed): Show error radius in EDIT portal
The error radius perfectly displayed in Vaadin UI (PhycoBank) should be also displayed in the EDIT portal(s).
Exampl...
Wolf-Henning Kusber
06:39 PM feature request #8850: Show annotations for DerivedUnits (Fieldunits etc) in Registration and oth...
Example with editorial annotation and etymology annotation: http://phycobank.org/102135 Wolf-Henning Kusber
01:25 PM bug #7699: NPE when searching for specimen in bulk editor
As far as I am understanding this problem it is the bulk editors which can be saves or closed while a search process ... Andreas Kohlbecker
11:00 AM bug #7699: NPE when searching for specimen in bulk editor
Another report of the same issue:
~~~
Hallo,

der bulk editor ist nicht zugänglich, das ist die Fehlermeldung,...
Andreas Kohlbecker
10:51 AM bug #6971: Collect all remaining appearances of multiple representation exceptions since 4.10
~~~
last remote method : http://localhost:59007/remoting/taxonnode.service
last remote request client time : 2020-0...
Andreas Kohlbecker
10:50 AM Revision 8445f83e (cdmlib-apps): adapt datasource name for caryo_genus
Andreas Müller
10:50 AM Revision 26f92af1 (cdmlib-apps): fix #8853 Aizoaceae finalized
Andreas Müller
10:48 AM Revision 748cb818 (cdmlib-apps): cleanup
Andreas Müller
10:40 AM task #8840: display identifiers in the dataportal
Hallo,
ich wollte noch anmerken, dass mich im Portal eigentlich vor allem auch der Link zum Identifier interessier...
Andreas Kohlbecker

02/20/2020

10:19 PM bug #8851 (In Progress): display of name facts not appropriate in all cases
remaining task to do: implement test Andreas Kohlbecker
09:16 AM bug #8851 (In Progress): display of name facts not appropriate in all cases
Hallo,
wir sind bei der Flora von Cuba auf ein Portalausgabeproblem gestoßen, und zwar bei den Name Facts.
Ansc...
Andreas Kohlbecker
05:51 PM feature request #8854 (Closed): Choose new base font size for the portal
copied from #6878
Weil du Wikipedia angesprochen hast, habe ich deren Schrift Einstellungen mit denen im Portal ...
Andreas Kohlbecker
05:46 PM feature request #6878: choose a base font for the portal and deliver it from the drupal module or...
Hallo Andreas,

besten Dank!­­­­­­ Toller Fund, auch ich finde die Noto Sans deutlich angenehmer zu lesen und ...
Andreas Kohlbecker
05:46 PM feature request #6878: choose a base font for the portal and deliver it from the drupal module or...
Hallo zusammen,

vielen Dank, Andreas, für die Info und die Test-Seite. Ich finde die Noto Sans im Vergleich b...
Andreas Kohlbecker
05:45 PM feature request #6878: choose a base font for the portal and deliver it from the drupal module or...
Hallo zusammen,

bei der Rückkehr zum alten Zustand wollte ich auf Nummer Sicher gehen und habe alte Screensho...
Andreas Kohlbecker
05:45 PM feature request #6878: choose a base font for the portal and deliver it from the drupal module or...
Guten Morgen zusammen,

mit den alten Verhältnissen war ich über viele Jahre sehr zufrieden. Auch bei selten auftr...
Andreas Kohlbecker
05:44 PM feature request #6878: choose a base font for the portal and deliver it from the drupal module or...
Hallo Walter,

das Ergebnis deiner Recherche stimmt schon, nur ist es so, dass wir in der Vergangenheit Proble...
Andreas Kohlbecker
05:44 PM feature request #6878: choose a base font for the portal and deliver it from the drupal module or...
Hallo,
ok, eventuell habe ich da nicht sorgfältig genug recherchiert, ich dachte, die PostScript Schriften Times u...
Andreas Kohlbecker
05:44 PM feature request #6878: choose a base font for the portal and deliver it from the drupal module or...
Hallo,

wenn schon eine MS Font, würde ich die Verdana wählen, denn diese ist im Gegensatz zu Arial und Helvet...
Andreas Kohlbecker
05:44 PM feature request #6878: choose a base font for the portal and deliver it from the drupal module or...
Hallo,
ich plädiere auch für eine, höchstens drei Standard Fonts – eine sans-serif, eine serif und eine monospaced...
Andreas Kohlbecker
05:43 PM feature request #6878: choose a base font for the portal and deliver it from the drupal module or...
Hallo,

ich denke, wir sollten uns aus Ressourcengründen auf eine Schrift für alle Portale einigen.

Ne...
Andreas Kohlbecker
05:43 PM feature request #6878: choose a base font for the portal and deliver it from the drupal module or...
Hallo,

hier nochmal die Zusammenfassung der Diskussion zum Überblick:

Bis zum letzten Release hatten ...
Andreas Kohlbecker
05:43 PM feature request #6878: choose a base font for the portal and deliver it from the drupal module or...
Hallo,
nicht mehr untragbar, aber meine unten gemachten Observationen gelten weiter – ich finde, das Schriftbild h...
Andreas Kohlbecker
05:43 PM feature request #6878: choose a base font for the portal and deliver it from the drupal module or...
Hallo Andreas,

das ist viel besser. Vielen Dank und Gruß,

Eckhard
Andreas Kohlbecker
05:42 PM feature request #6878: choose a base font for the portal and deliver it from the drupal module or...
Hallo,

in der Situation bis vor wenigen Minuten war es noch so, dass es auf dem Produktionssystem ein Problem...
Andreas Kohlbecker
05:42 PM feature request #6878: choose a base font for the portal and deliver it from the drupal module or...
Hallo,

bei dem jetzigen Font sehen insbesondere die „y“ sehr unschön aus, wie man hier gut sehen kann:

...
Andreas Kohlbecker
05:41 PM feature request #6878: choose a base font for the portal and deliver it from the drupal module or...
Hallo,
ich hatte ja gerade Beispiele im Kuba Portal gesucht – das sieht wirklich scheußlich aus.

Die Sache...
Andreas Kohlbecker
05:40 PM feature request #6878 (In Progress): choose a base font for the portal and deliver it from the dr...
Andreas Kohlbecker
05:37 PM feature request #6878: choose a base font for the portal and deliver it from the drupal module or...
The DejaVu font seems to cause Problem in Win10 where the render engine of edge and FF apparently is not using font s... Andreas Kohlbecker
05:37 PM feature request #6878: choose a base font for the portal and deliver it from the drupal module or...
Dann gehen wir das nach dem Release an:

1. Umstellen des Portals auf größere Schrift und etwas größeren Zeilena...
Andreas Kohlbecker
05:37 PM feature request #6878: choose a base font for the portal and deliver it from the drupal module or...
Hallo Andreas,

danke! Ja, finde ich eine gute Idee, das breiter abzustimmen.

Schöne Grüße,
Norbert
Andreas Kohlbecker
05:36 PM feature request #6878: choose a base font for the portal and deliver it from the drupal module or...
Hier nochmal die alte (Droid Sans) und neue Schrift (DejaVu Sans) im Vergleich:
![](Schriftenvergleich-DejaVu-Droi...
Andreas Kohlbecker
05:36 PM feature request #6878: choose a base font for the portal and deliver it from the drupal module or...
Hallo Andreas,

herzlichen Dank für Deine hilfreichen Ausführungen; diese Zusammenhänge mit dem jeweiligen Bet...
Andreas Kohlbecker
05:35 PM feature request #6878: choose a base font for the portal and deliver it from the drupal module or...
Hallo Norbert,

Bei den Cichorien hatten wir die Verdana eingestellt, diese steht aber nur auf Windowssystemen...
Andreas Kohlbecker
05:35 PM feature request #6878: choose a base font for the portal and deliver it from the drupal module or...

Hallo Andreas,
denkst Du noch daran, wenn Du die Zeit findest, dem Cichorieae-Portal wieder seinen ursprünglic...
Andreas Kohlbecker
05:39 PM task #8813 (Duplicate): Zen theme base font with better redability
closing as duplicate of #6878 - all text and images moved to there Andreas Kohlbecker
04:57 PM Revision e61852f0 (cdm-dataportal): ref #6878 better Droid Sans web font
Andreas Kohlbecker
04:30 PM Revision 58e2064c (taxeditor): fix last used abcd config
Katja Luther
04:07 PM Revision 27a480c7 (cdm-dataportal): ref #6878 replacing Noto Sans web font with set created on tr...
Andreas Kohlbecker
03:23 PM Revision d5f4d97c (cdm-dataportal): ref #6878 adding virtual version paramter to fonts for forcin...
Andreas Kohlbecker
03:12 PM Revision f5c65cd5 (cdm-dataportal): ref #6878 css class to tests Noto Sans
Andreas Kohlbecker
02:25 PM Revision cc758b3e (cdm-dataportal): ref #6878 re-activating Droid Sans and installing Noto Sans
Andreas Kohlbecker
01:46 PM Revision 721766b0 (cdmlib-apps): ref #8853 Aizoaceae import more or less ready
Andreas Müller
01:45 PM task #8853 (Closed): Import Aizoaceae from Kew World Checklist to Caryo spp
Andreas Müller
12:23 PM Revision cb36db97 (taxeditor): ref #8047: move remove button to status bar
Katja Luther
12:23 PM Revision 98f05cec (taxeditor): avoid NPE in preferenceUtil and TermPreferencePages
Katja Luther
12:23 PM Revision a4469da8 (taxeditor): ref #8047: use icon for remove button
Katja Luther
10:00 AM feature request #8852: Improve TaxEditor startup options
das ist ein interessanter Vorschlag. Man müsste allerdings den Namen des CDM-Servers und den der Instanz als Paramete... Andreas Kohlbecker
09:52 AM feature request #8852 (New): Improve TaxEditor startup options
To start a TaxEditor DB instance currently requires multiple user interactions: clicking on TaxonomicEditor.exe, clic... Katja Luther
09:51 AM Revision 1c7c424f (cdm-dataportal): ref #8851 improving display of name facts
Andreas Kohlbecker
09:48 AM Revision 9e5ea8e0 (cdm-dataportal): ref #8851 improving display of name facts
Andreas Kohlbecker

02/19/2020

06:37 PM bug #8812 (Resolved): Connection losses in taxeditor HTTP invoker (RemoteAccessException: Could n...
After setting the `NoConnectionReuseStrategy` for `PoolingHttpClientConnectionManager` (commit:taxeditor|e2766ed7) I ... Andreas Kohlbecker
05:38 PM bug #8812: Connection losses in taxeditor HTTP invoker (RemoteAccessException: Could not access H...
From the current point of view there are following options to solve this problem:
1. Configure httclient to never ...
Andreas Kohlbecker
02:29 PM bug #8812: Connection losses in taxeditor HTTP invoker (RemoteAccessException: Could not access H...
Another combined logfile which shows the time stamps of the last package at the client side:
~~~
cdm-server_1...
Andreas Kohlbecker
06:27 PM Revision e2766ed7 (taxeditor): ref #8812 setting NoConnectionReuseStrategy for PoolingHttpClientC...
Andreas Kohlbecker
11:39 AM Revision 87e410a8 (cdm-dataportal): Merge tag '5.12.1' into develop
tagging 5.12.1 Andreas Kohlbecker
11:39 AM Revision 0ab10ccd (cdm-dataportal): Merge branch 'hotfix/5.12.1'
Andreas Kohlbecker
11:39 AM Revision 82dd0247 (cdm-dataportal): Merge branch 'develop' into hotfix/5.12.1
Andreas Kohlbecker
11:21 AM feature request #8850 (New): Show annotations for DerivedUnits (Fieldunits etc) in Registration a...
Andreas Kohlbecker
09:32 AM feature request #8850 (Rejected): Show annotations for DerivedUnits (Fieldunits etc) in Registrat...
Andreas Kohlbecker
09:27 AM feature request #8850 (Closed): Show annotations for DerivedUnits (Fieldunits etc) in Registratio...
Example:
* https://www.phycobank.org/cdm_dataportal/registration/http%253A%252F%252Fphycobank.org%252F102121
...
Andreas Kohlbecker

02/18/2020

06:25 PM bug #8812: Connection losses in taxeditor HTTP invoker (RemoteAccessException: Could not access H...
Result from a detailed analysis of the client and server behavior during communication over a local connection with s... Andreas Kohlbecker
01:10 PM bug #8849 (Closed): NPE in synonym DetailsViewer for synonyms without accepted taxon
if a synonym has no accepted taxon an exception appears.
in DetailsViewerE4.createTaxonSections():
~~~ java
...
Katja Luther
12:03 PM bug #5907: Advanced Search for taxa: search results seem to be unordered
Also reported by Eckhard:
beim Ausprobieren der advanced search options im Portal fiel mir auf, dass die Ausgabeli...
Andreas Kohlbecker

02/17/2020

02:07 PM Revision 9422faca (cdmlib): ref #8812 option for measuring remoting method execution duration
Andreas Kohlbecker
02:06 PM bug #8812: Connection losses in taxeditor HTTP invoker (RemoteAccessException: Could not access H...
Andreas Kohlbecker wrote:
> The above error is perfectly reproducible with limited rate networks (64kbit/s):
>
> ...
Andreas Kohlbecker

02/14/2020

05:18 PM bug #8848: Search fails with low data rate network (64kbit/s) network connection due to lost aut...
It is a question of which context holder strategy is being used in the application. By default `ThreadLocalSecurityCo... Andreas Kohlbecker
02:44 PM bug #8848 (Feedback): Search fails with low data rate network (64kbit/s) network connection due ...
I do not fully understand this discussion. How can the thread strategy influence if authenticaion fails with a low da... Andreas Müller
01:12 PM bug #8848 (Closed): Search fails with low data rate network (64kbit/s) network connection due to...
Andreas Kohlbecker wrote:
> Do you know about any reason why the thread local strategy has been used? If not we can ...
Katja Luther
12:59 PM bug #8848 (Resolved): Search fails with low data rate network (64kbit/s) network connection due ...
Do you know about any reason why the thread local strategy has been used? If not we can close this ticket. Andreas Kohlbecker
12:46 PM bug #8848 (Feedback): Search fails with low data rate network (64kbit/s) network connection due ...
During testing the taxeditor with low data rate network conditions [64kbit/s] (see #8812), the search fails, since th... Andreas Kohlbecker
12:57 PM Revision 5a87d221 (taxeditor): ref #8848 switching from thread local to global secutity context h...
Andreas Kohlbecker
10:54 AM task #8047: Remaining issues in TaxDistributionEditor
> ~~Disable "Add Source" or "Remove Source" depending on the current state of source selection~~
> * Use icon (delet...
Katja Luther

02/13/2020

04:53 PM bug #8812: Connection losses in taxeditor HTTP invoker (RemoteAccessException: Could not access H...
The above error is perfectly reproducible with limited rate networks (64kbit/s):
~~~
15:16:06,962 INFO CachingHt...
Andreas Kohlbecker
11:59 AM bug #8812: Connection losses in taxeditor HTTP invoker (RemoteAccessException: Could not access H...
With `httpcomponentes` updated to version 4.5.11 the taxeditor works much better.
However after making an accepted...
Andreas Kohlbecker
11:52 AM bug #8812: Connection losses in taxeditor HTTP invoker (RemoteAccessException: Could not access H...
Andreas Kohlbecker wrote:
> Andreas Müller wrote:
> > Andreas Kohlbecker wrote:
> > > Andreas Müller wrote:
> > >...
Andreas Kohlbecker
03:46 PM Revision 90b91cfb (cdmlib-apps): minor changes to GreeceImageActivator
Andreas Müller
01:14 PM bug #8847: Name in Source is added always when moving description from one taxon to another
sorry, yes please review Katja Luther
01:13 PM bug #8847: Name in Source is added always when moving description from one taxon to another
should I review? Andreas Müller
11:46 AM bug #8847 (Resolved): Name in Source is added always when moving description from one taxon to an...
Applied in changeset commit:taxeditor|ea45bb4360ae76275fde0593227d7cb0431c4ee7. Katja Luther
11:43 AM bug #8847 (Closed): Name in Source is added always when moving description from one taxon to another
When choosing move description to another taxon (without setting name in source) the name in source is added. Katja Luther
01:11 PM bug #8562 (In Progress): Remaining issues for preference pages
Andreas Müller
01:04 PM Revision d41ad916 (taxeditor): ref #8562: continue work on preference pages - supplemental data a...
Katja Luther
12:52 PM Revision 942f6e18 (taxeditor): ref #8562: continue work on preference pages - supplemental data
Katja Luther
11:54 AM Revision d147dfd6 (taxeditor): ref #8562: continue work on preference pages
Katja Luther
11:44 AM Revision ea45bb43 (taxeditor): fix #8847: fix name in source addition for moving description
Katja Luther
11:07 AM Revision f1765720 (taxeditor): updating nebula widgets 1.0.0.20190715144 -> 1.0.0.20191224110
Andreas Kohlbecker

02/11/2020

01:35 PM Revision 6720d336 (cdmlib-apps): ref #1447 improve command line merger
Andreas Müller
01:08 PM Revision 8b87aa0b (taxeditor): use PreferencePredicate for MobotOpenUrlServiceAccessPoint instead...
Katja Luther
01:01 PM Revision 4db0e47a (taxeditor): fix handleGeneralRequest, load(result) instead of load(result.getC...
Katja Luther
09:50 AM Revision 69213a6e (taxeditor): ref #8562: add admin preference page for multilanguage support
Katja Luther
08:42 AM Revision c1ad99d9 (taxeditor): ref #8812 managing dependencies via maven, removing duplicate depe...
Andreas Kohlbecker
08:35 AM bug #8812: Connection losses in taxeditor HTTP invoker (RemoteAccessException: Could not access H...
Andreas Müller wrote:
> Andreas Kohlbecker wrote:
> > Andreas Müller wrote:
> > > I don't think the dependency han...
Andreas Kohlbecker

02/10/2020

05:27 PM bug #8812: Connection losses in taxeditor HTTP invoker (RemoteAccessException: Could not access H...
Andreas Kohlbecker wrote:
> Andreas Müller wrote:
> > I don't think the dependency handling for httpcomponents is c...
Andreas Müller
05:16 PM bug #8812: Connection losses in taxeditor HTTP invoker (RemoteAccessException: Could not access H...
Andreas Müller wrote:
> I don't think the dependency handling for httpcomponents is correct. Dependencies inherited ...
Andreas Kohlbecker
04:53 PM bug #8812: Connection losses in taxeditor HTTP invoker (RemoteAccessException: Could not access H...
I don't think the dependency handling for httpcomponents is correct. Dependencies inherrited from cdmlib are handled ... Andreas Müller
05:23 PM Revision a2839297 (cdmlib): allow adding reverse representations to taxon relationship type durin...
Andreas Müller
05:22 PM Revision b729928e (cdmlib): cleanup
Andreas Müller
05:20 PM Revision bed66cf1 (cdmlib): remove commented test dependencies from ext-pom
Andreas Müller
04:56 PM task #8840: display identifiers in the dataportal
Andreas Kohlbecker wrote:
> Also consider transformation of IPNI-LSIDs to identifiers.
Can you explain what is me...
Andreas Müller
12:44 PM Revision 75785495 (taxeditor): cleanup
Andreas Müller
12:36 PM Revision b83b73a7 (taxeditor): ref #8812 logging of request duration in case of socket timeouts
Andreas Kohlbecker
12:34 PM Revision d9511145 (taxeditor): ref #8812 connect request timeouts and more doc on timeouts
Andreas Kohlbecker
11:38 AM Revision 76f6b44c (taxeditor): ref #8812 upgrading httpcomponents to 4.5.11 - cleanup
Andreas Kohlbecker
10:54 AM Revision 82227023 (taxeditor): ref #8812 upgrading httpcomponents to 4.5.11
Andreas Kohlbecker

02/06/2020

12:03 PM bug #8846 (Worksforme): Correctly parsed nomenclatural reference uncorrectly saved when taxon has...
Hallo liebes Editor Team,
ich habe einen etwas merkwürdigen Fehler, der ohne Fehlermeldung auftritt.
Wenn ich bei d...
Katja Luther
10:41 AM task #8844 (Closed): distinguish SocketTimeoutException from ConnectException
this looks good. Katja Luther

02/05/2020

05:51 PM bug #8845 (Closed): external links: GGBN not shoing up in admin section
Andreas Kohlbecker
05:50 PM bug #8845 (Resolved): external links: GGBN not shoing up in admin section
Applied in changeset commit:cdm-dataportal|10c4424f1f9360d42e2c22d9c4ddddc49b98e88b. Andreas Kohlbecker
05:35 PM bug #8845 (Closed): external links: GGBN not shoing up in admin section
This is most probably caused by commenting the "Fairchild Guide To Palms" link. By this the array keys are no longer ... Andreas Kohlbecker
05:50 PM Revision 10c4424f (cdm-dataportal): fix #8845 fixing bug in ext-links introduced by commenting br...
Andreas Kohlbecker
04:51 PM task #8844 (Resolved): distinguish SocketTimeoutException from ConnectException
Hi Katja, can you please have a look at my solution? Andreas Kohlbecker
03:16 PM task #8844 (Closed): distinguish SocketTimeoutException from ConnectException
SocketTimeoutExceptions which are caused by bad network quality between client and server should be distinguished fro... Andreas Kohlbecker
04:50 PM Revision c29cc6f1 (taxeditor): ref #8844 specific message in case of SockeTimeoutExceptions
Andreas Kohlbecker
04:49 PM Revision 2c520578 (taxeditor): ref #8812 replacing deprecated usage of apache HttpClient by new c...
Andreas Kohlbecker
01:53 PM Revision 090b67e0 (cdmlib): ref #8562: adapt language preference predicates
Katja Luther
12:39 PM bug #8843 (New): Revise term caching
The actual mechanisms of the term caching in the teaxeditor is unclear and undocumented. Several parallel classes and... Andreas Kohlbecker
12:15 PM bug #8842 (Resolved): CdmServiceRequestExecutor is not stateleass and neither thread save nor acc...
The commit:taxeditor|1c21abc1 most probably removed at least two potential root causes for MultipleRepresentation pro... Andreas Kohlbecker
11:21 AM bug #8842 (In Progress): CdmServiceRequestExecutor is not stateleass and neither thread save nor ...
Andreas Kohlbecker
12:03 PM Revision e2bff0b1 (taxeditor): ref #8842 claning up - removing obsolete classes and renaming
Andreas Kohlbecker
12:02 PM Revision 1c21abc1 (taxeditor): ref #8842 replacing caching in CdmServiceRequestExecutor by Cachin...
Andreas Kohlbecker

02/04/2020

04:34 PM Revision 7a05f578 (taxeditor): ref #8812 proper exception handling in RequestExecutor for more me...
Andreas Kohlbecker
01:59 PM bug #8842 (Resolved): CdmServiceRequestExecutor is not stateleass and neither thread save nor acc...
CdmServiceRequestExecutor uses the field
~~~java
private RemoteInvocation currentRemoteInvocation;
~~~
to re...
Andreas Kohlbecker
11:10 AM Revision 9aae99e8 (taxeditor): ref #8841 cleaning up application context config - step 1
Andreas Kohlbecker
10:28 AM task #8841 (In Progress): clean up application context configuration
Andreas Kohlbecker
10:28 AM task #8841 (In Progress): clean up application context configuration
The spring app config in the taxeditor project is messy:
* obsolete XML configuration files
* obsolete context sc...
Andreas Kohlbecker

02/03/2020

05:12 PM bug #8812: Connection losses in taxeditor HTTP invoker (RemoteAccessException: Could not access H...
an analysis of the reported RemoteAccessException as found in my Emails shows that the exceptions are having specific... Andreas Kohlbecker
03:36 PM Revision 90b2c296 (cdm-dataportal): ref #8813 installing new version of DejaVu downloaded from fo...
Andreas Kohlbecker
02:47 PM feature request #8044: Add "Move to..." menu to term editor
Applied in changeset commit:taxeditor|bac71f46b6eb8bf94a76efbb9217525700259da2. Katja Luther
02:37 PM feature request #8044 (Resolved): Add "Move to..." menu to term editor
this is fixed now, please review Katja Luther
02:47 PM Revision bac71f46 (taxeditor): fix #8044: remove injected method
Katja Luther
02:45 PM task #8813: Zen theme base font with better redability
The DejaVu font seems to cause Problem in Win10 where the render engine of edge and FF apparently is not using font s... Andreas Kohlbecker
02:39 PM bug #8763 (Duplicate): Remaining issues for "Move term" in term editor
as this ticket contains nearly the same issues mentioned in #8044, I close this ticket as duplicate Katja Luther
02:36 PM Revision cb827f5e (taxeditor): ref #8763: disable multiselect
Katja Luther
02:25 PM task #8840 (New): display identifiers in the dataportal
identifiers for all cdm types need to be shown (`IdentifiableEntity.identifier`)
Identifiers exist in Caryophyllal...
Andreas Kohlbecker
01:35 PM Revision 419f60bc (cdm-dataportal): Revert "version param for fonts to force reloading"
This reverts commit 641bfcf8e442ac671dea910b9392ba610bc06237. Andreas Kohlbecker
01:30 PM Revision 641bfcf8 (cdm-dataportal): version param for fonts to force reloading
Andreas Kohlbecker
11:30 AM Revision a57fcfb4 (taxeditor): ref #8763: set search button to default
Katja Luther
09:54 AM Revision 501ec636 (cdmlib): ref #8044: add missing termcollection dto
Katja Luther
 

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