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From 12/31/2019 to 01/29/2020

01/29/2020

11:28 PM task #8835: DISCUSS if the UPDATE & DELETE permission stategy should become a general principle i...
I think I should not be assignee. Katja, Andreas, can you please decide who will care? Andreas Müller
05:06 PM task #8835 (New): DISCUSS if the UPDATE & DELETE permission stategy should become a general princ...
During the E+M Training (2020-01-19) it turned out that the current default permissions are not complete to allow con... Andreas Kohlbecker
05:09 PM bug #8836 (Closed): add default role Editor-Reference (REFERENCE.[UPDATE,DELETE], TEAMORPERSONBAS...
During the E+M Training (2020-01-19) it turned out that the current default permissions are not complete to allow con... Andreas Kohlbecker
10:24 AM feature request #8749 (Resolved): Add proposalProvider to AbstractComboElement
Katja Luther
09:05 AM feature request #8749 (In Progress): Add proposalProvider to AbstractComboElement
Katja Luther

01/28/2020

02:02 PM bug #8733 (In Progress): Descriptive data set: Specimens of a newly added taxon are not listed in...
When adding or deleting a taxonnode filter to descriptive dataset the specimen cache of the matrix is set to null and... Katja Luther
12:32 PM bug #8833: distribution editor: Exception when filtering by taxon
solving this issue may be obsolete once #8834 is solved Andreas Kohlbecker
12:30 PM task #8834 (Closed): use TaxonNodeDto instead of UuidAndTitleCache
in #8815 the UuidAndTitleCache methods are to be removed. The vaadin apps need to be adapted accordingly. Andreas Kohlbecker
12:00 PM feature request #8756: Refresh button for structure tree and property tree in Character Editor
please review Katja Luther
11:59 AM feature request #8756 (Resolved): Refresh button for structure tree and property tree in Characte...
Applied in changeset commit:taxeditor|e751d1723a238ce06ee6b1dc0cd67399a7ae8618. Katja Luther
11:42 AM bug #8828 (Resolved): statistical values must not show empty brackets
Applied in changeset commit:cdm-dataportal|7f36e33afada1e19bcf605586e9ade4c64a2c264. Andreas Kohlbecker
11:39 AM feature request #8688 (Resolved): Make OriginalSourceBase.cdmSource visible in TaxEditor
now only titleCache (for identifiable entities) or uuid (for cdmBase objects) is shown Katja Luther

01/27/2020

04:49 PM bug #8833: distribution editor: Exception when filtering by taxon
This seems to be a bug in TaxonNodeDaoHibernateImpl.getUuidAndTitleCache() Andreas Kohlbecker
04:40 PM bug #8833 (New): distribution editor: Exception when filtering by taxon

====
might be fixed by fixing #8834
====
~~~
at javax.servlet.http.HttpServlet.service(HttpServle...
Andreas Kohlbecker
02:31 PM bug #8832 (Resolved): Choosing the area for distribution in details view clears the selected status
When selecting the area for a distribution and the status is already choosen, the status is cleared again. Katja Luther
12:49 PM bug #8830 (Resolved): add missing spaces to statistical value representations
Applied in changeset commit:cdm-dataportal|2dae60cd0f256dbf1c93bfcffaa28d0ca73d4c85. Andreas Kohlbecker
12:48 PM bug #8830 (In Progress): add missing spaces to statistical value representations
Andreas Kohlbecker
09:45 AM bug #8830 (Closed): add missing spaces to statistical value representations
Leerzeichen vor der Einheit und der Klammer:
~~„0 [] m“.~~ corrected after duscussion to: "0 m []"
Andreas Kohlbecker
11:54 AM bug #8831: saving name editor throws NPE
Maybe this is because the scientific name is passed as name object not the uuid and loaded on server side. Katja Luther
10:51 AM bug #8831 (New): saving name editor throws NPE
after editing authors in name editor the following exception appears, this exception
~~~
last remote method : ht...
Katja Luther
11:42 AM bug #8829 (Closed): NullPointerException (NPE) in TaxonNodeService
Your fix is correct.
I added a further null check in the controller method so that the the service responds with t...
Andreas Kohlbecker
10:24 AM bug #8829 (Feedback): NullPointerException (NPE) in TaxonNodeService
The NPE in TaxonNodeServiceImpl.dto has been fixed. Please review and check that controller returns correct http erro... Andreas Müller
09:42 AM bug #8829 (Closed): NullPointerException (NPE) in TaxonNodeService
the request http://api.cybertaxonomy.org:80/euromed/taxonNode/f7a20e6e-c144-4d9e-b307-03a1f3b5305a causes
~~~
...
Andreas Kohlbecker

01/24/2020

01:23 PM bug #8828: statistical values must not show empty brackets
Andreas Kohlbecker wrote:
> Hallo,
>
>
>
> ggf auch auf das Leerzeichen vor der Einheit (und ggf. der Klamme...
Andreas Kohlbecker
01:23 PM bug #8828: statistical values must not show empty brackets
Hallo,

ggf auch auf das Leerzeichen vor der Einheit (und ggf. der Klammer) achten. Ich habe nicht überprüft, ...
Andreas Kohlbecker
11:23 AM bug #8828 (Closed): statistical values must not show empty brackets
bei den Höhenangaben gab es nun jahrelang bei den Arten, wo Max. und Min. gleich sind, den Standard, dass dann nicht ... Andreas Kohlbecker
11:47 AM bug #8548: ReferenceEditor: Layout problem when opening Reference editor (new journal, new book, ...
Layout in Reference editor is fine, now. If corrected within the production UI the ticket can be closed. Thanks a lot. Wolf-Henning Kusber
11:30 AM bug #8548 (Resolved): ReferenceEditor: Layout problem when opening Reference editor (new journal,...
Hallo Henning, das Layoutproblem ist gelöst. Bitte teste das einmal im Test Server. Andreas Kohlbecker
11:27 AM bug #6036 (Closed): Problems with deleting type names
Katja Luther
11:12 AM bug #6036: Problems with deleting type names
The problem was that removing a NameTypeDesignation did not delete the NameTypeDesignation this is fixed now. I will ... Katja Luther

01/23/2020

01:53 PM EDIT Platform Etablierung task #8827 (New): Add Chapters to Term, TermTrees, Characters to the documentation
Andreas Kohlbecker
01:36 PM bug #8785 (Feedback): Move functionality of buttons to context menu of the character matrix
removing of a specimen description from a descriptive dataset works in character matrix by selecting the whole row of... Katja Luther
01:16 PM task #8826 (New): DISCUSS: Display of name facts in the portal

[walter:]
Wenn ich mich richtig erinnere, greift das Portal bei der Darstellung von Fakten auf einen Feature Tre...
Andreas Kohlbecker
11:51 AM bug #8784: Deleting a specimen description not possible
please review Katja Luther
11:40 AM bug #8784 (Resolved): Deleting a specimen description not possible
Applied in changeset commit:taxeditor|8cc448f70b9f3752a606b01d147dcd46aa685178. Katja Luther
10:49 AM bug #8825: Name features are shown in menu of factual data view of taxa when no preferences defined
please review. Katja Luther
10:48 AM bug #8825 (Resolved): Name features are shown in menu of factual data view of taxa when no prefer...
Applied in changeset commit:taxeditor|b19e08c16ecd56b8e2b425975573c07ddd006a6b. Katja Luther
10:44 AM bug #8825 (Closed): Name features are shown in menu of factual data view of taxa when no preferen...
The right click menu of a taxon factual data set shows taxon and name features when no preferences defined. The name ... Katja Luther
10:00 AM bug #8824 (New): No dirty flag when adding new factual data set
mail AM:
bei mir wird das dirty Flag nicht gesetzt, wenn ich Fact DataSets anlege, egal ob NameFacts oder TaxonFac...
Katja Luther
09:39 AM bug #8782 (Resolved): Delete a description included in a CdmSource should not be possible
now deletion is possible only for not referenced descriptions. Katja Luther

01/22/2020

03:09 PM bug #8791 (Resolved): Measurement units are not assigned to quantitative data in matrix
please review. Katja Luther
02:43 PM feature request #8823 (New): Better exception handling in cdm light export
Sometimes excpetions appear because of missing data (e.g. emtpy textual type designations) or wrong sort index. These... Katja Luther
10:02 AM feature request #8624 (Resolved): Add abbrev title cache to search in bulk editor
Katja Luther

01/21/2020

10:55 AM feature request #8749: Add proposalProvider to AbstractComboElement
this ticket was solved for vocabulary combo elemtents in 5.12 and for all other combo elements in 5.13 Katja Luther
10:55 AM feature request #8749 (Resolved): Add proposalProvider to AbstractComboElement
Applied in changeset commit:taxeditor|aae0ca069a639007aa180a7193fa0b510c0499d7. Katja Luther
09:32 AM feature request #8822 (New): Handle exceptions caused by sortinex problems in cdm light export
The exception handling in cdm light should handle sortindex problems with better exception message.
At the moment...
Katja Luther

01/20/2020

04:04 PM bug #8821 (New): ConcurrentModificationException during deduplication in bulk editor
Hallo,
etwas Neues – Referenzen Deduplizierung, nach delete Nachfrage Save für vorheriges Delete.
HG
W
~~~
log...
Andreas Müller
03:53 PM bug #8627: NullPointerException (NPE) on saving Specimen Editor (list)
AK, why is this a **copy** of #8626?
Did you mean "related to"?
Andreas Müller
03:50 PM bug #7699 (New): NPE when searching for specimen in bulk editor
This exception appears quite often therefore I put it to the current milestone.
We need to find to handle it so t...
Andreas Müller
03:06 PM feature request #8721 (Closed): Use webservice to get all biocase provider listed by gbif
Generally this works. Open issues moved to #8820 Andreas Müller
03:04 PM task #8820 (New): Improve BioCase provider selection list
Copied from #8721
* The access points should be searchable also by the accesspoint title, For the BGBM Herbarium t...
Andreas Müller
02:52 PM feature request #8489 (Resolved): Further issues for DB preferences
putting back to 5.10 for review, no changes since then. Follow up ticket for open issues: #8818.
During review put n...
Andreas Müller
02:51 PM feature request #8819 (New): import cf. and aff. names as child taxa of the mentioned genus
Names with cf. or aff. should handled as child taxa of the mentioned genus for example *Amphora cf. minutissima W. Sm... Katja Luther
02:48 PM task #8818 (New): Remaining issues for DB preferences
Copied from #8489
* check wether all (wanted) preferences are available as db preferences
* menu.disableMul...
Andreas Müller
02:25 PM bug #8817 (New): abcd import gathering date contains T00:00:00 when time is missing
The string comes from biocase and the parser is not able to parse it.
This time information is wrong, this should be...
Katja Luther
12:55 PM feature request #8677 (Closed): Add distribution aggregation to set subtree menu
>source type selection per source mode
maybe there is a misunderstanding, I meant source **type** . There is still...
Andreas Müller
12:50 PM feature request #8677: Add distribution aggregation to set subtree menu
>use message() for enumeration labels
This seems not yet to be used by "Aggregation mode". I move this to follow u...
Andreas Müller
12:45 PM feature request #8805 (Closed): In distribution editor synoms should be available as concatenated...
Works and ticket can be closed. Maybe in future we can also include ppSyns and MAN and maybe there is even the possib... Andreas Müller
10:48 AM feature request #8805 (Resolved): In distribution editor synoms should be available as concatenat...
Andreas Müller
12:17 PM bug #8736 (Closed): LazyInitializationException (LIE) during adding Specimens to Matrix Editor
Katja Luther
12:12 PM bug #8736 (Feedback): LazyInitializationException (LIE) during adding Specimens to Matrix Editor
I guess this can be closed in 5.12 as there is a follow up ticket in 5.13? Andreas Müller
11:24 AM feature request #6676 (Duplicate): A user with READ access to taxa but WRITE access to factual da...
Katja Luther wrote:
> I think this is fixed with #8810, @AK is this right?
Exactly.
Andreas Kohlbecker
11:07 AM feature request #6676 (Resolved): A user with READ access to taxa but WRITE access to factual dat...
I think this is fixed with #8810, @AK is this right? Katja Luther
11:23 AM bug #8816 (Worksforme): NoSuchElementException during adding Specimens to Matrix Editor
Exception during adding Specimens to Matrix Editor
Server side:
~~~
[caryophyllales_spp] 11:42:48,590 INFO [Th...
Katja Luther
11:20 AM bug #6585 (Rejected): Combo menu items have orange font
I cant reproduce this.
This depends for sure on the linux desktop theme that Patrick was using in this case. Since h...
Andreas Kohlbecker
11:05 AM bug #6585 (Feedback): Combo menu items have orange font
Andreas Müller
11:04 AM bug #6585: Combo menu items have orange font
on windows I can't reproduce this issue, @AK, could you please have a look on linux? Katja Luther
11:09 AM bug #8810 (Closed): In taxeditor parts without permissions should be disabled
Katja Luther
11:02 AM bug #6036: Problems with deleting type names
to have look if this is still an open issue set to Highest. Katja Luther
10:59 AM feature request #7981: Add configuration UI for matrix description aggregation
Move this to 5.13 Katja Luther
10:48 AM feature request #8749: Add proposalProvider to AbstractComboElement
check which parts are already solved and which still open, therefore move to 5.13 but maybe create a new ticket and m... Katja Luther
10:37 AM bug #8645 (Closed): rename menu item General > Import > "OWL Import" to "Term Tree OWL Import"
fixed Andreas Müller

01/17/2020

09:21 PM feature request #8706: taxeditor error report with timestamps
ready for review Andreas Kohlbecker
09:21 PM feature request #8706 (Resolved): taxeditor error report with timestamps
Applied in changeset commit:taxeditor|6e1d17962e4f23d254da242b13a7e188d69793ca. Andreas Kohlbecker
03:13 PM feature request #8706 (In Progress): taxeditor error report with timestamps
Andreas Kohlbecker
12:09 PM task #8813 (In Progress): Zen theme base font with better redability
Andreas Kohlbecker
12:08 PM task #8813: Zen theme base font with better redability
Dann gehen wir das nach dem Release an:

1. Umstellen des Portals auf größere Schrift und etwas größeren Zeilena...
Andreas Kohlbecker
12:08 PM task #8813: Zen theme base font with better redability
Hallo Andreas,

danke! Ja, finde ich eine gute Idee, das breiter abzustimmen.

Schöne Grüße,
Norbert
Andreas Kohlbecker
11:29 AM task #8813 (Feedback): Zen theme base font with better redability
Hier nochmal die alte (Droid Sans) und neue Schrift (DejaVu Sans) im Vergleich:
![](Schriftenvergleich-DejaVu-Droi...
Andreas Kohlbecker
09:29 AM task #8813: Zen theme base font with better redability
Hallo Andreas,

herzlichen Dank für Deine hilfreichen Ausführungen; diese Zusammenhänge mit dem jeweiligen Bet...
Andreas Kohlbecker
08:36 AM task #8813 (Resolved): Zen theme base font with better redability
Hallo Norbert,

Bei den Cichorien hatten wir die Verdana eingestellt, diese steht aber nur auf Windowssystemen...
Andreas Kohlbecker
08:35 AM task #8813 (Duplicate): Zen theme base font with better redability
Hallo Andreas,

denkst Du noch daran, wenn Du die Zeit findest, dem Cichorieae-Portal wieder seinen ursprüngli...
Andreas Kohlbecker
09:22 AM bug #8815 (Closed): Clean up TaxonNodeDto and UuidAndTitleCache usage in TaxonNodeService/Dao
In TaxonNodeService and Dao the usage of TaxonNodeDtp and UuidAndTitleCache duplicates some functionality. This shoul... Katja Luther
09:08 AM bug #8814: Clean implementation for permissions with combination of Taxonnode and other permissions
Please always add "related issues" to follow up tickets not only in ticket description. This way it is linked bedirec... Andreas Müller
08:49 AM bug #8814 (New): Clean implementation for permissions with combination of Taxonnode and other per...
this is a follow up ticket for #8810.
With the actual implementation it is not possible to decide with one call wh...
Katja Luther

01/16/2020

05:11 PM bug #8810 (Feedback): In taxeditor parts without permissions should be disabled
Andreas Müller
03:20 PM bug #8810: In taxeditor parts without permissions should be disabled
this temporary solution works as expected, but we will need a more complete solution.
This ticket can be closed on...
Andreas Kohlbecker
01:53 PM bug #8810 (Resolved): In taxeditor parts without permissions should be disabled
Andreas Müller
12:02 PM bug #8810 (Closed): In taxeditor parts without permissions should be disabled
The user should not be able to edit entities, he/she does not have the permissions for. When checking the permission ... Katja Luther
05:09 PM feature request #8805 (Feedback): In distribution editor synoms should be available as concatenat...
For me no synonyms are shown in the column. I tested on rem_conf_am with classification "Testklass". At least taxon N... Andreas Müller
02:13 PM feature request #8805 (Resolved): In distribution editor synoms should be available as concatenat...
Applied in changeset commit:taxeditor|77172e4955db32cfa9193fbbb03ec81aa7851734. Katja Luther
03:52 PM bug #8812 (Resolved): Connection losses in taxeditor HTTP invoker (RemoteAccessException: Could n...
A couple of situations exist in which users report problems due to RemoteAccessExceptions ("Could not access HTTP inv... Andreas Kohlbecker
02:01 PM feature request #8749: Add proposalProvider to AbstractComboElement
should we split the ticket and move open issue to 5.13. At least partly it works as far as I remember from vocabulary... Andreas Müller
01:58 PM feature request #8749 (In Progress): Add proposalProvider to AbstractComboElement
need to have a look at this topic again Katja Luther
02:00 PM feature request #6760 (Worksforme): specimen import configuration
I don't what this means exactly. When importing e.g DNA samples of already existing specimen, this is correctly attac... Katja Luther
01:54 PM bug #8745 (Closed): Type designations of synonyms missing on specimen page
This is fixed! Andreas Kohlbecker
01:42 PM bug #8745 (Resolved): Type designations of synonyms missing on specimen page
Andreas Müller
01:48 PM feature request #8299 (Closed): add typification column to scientific name and homotypical group ...
Katja Luther
01:38 PM feature request #8299: add typification column to scientific name and homotypical group in cdm light
I don't think we should move this. It was probably fixed in 5.12 Andreas Müller
01:35 PM bug #8645 (Resolved): rename menu item General > Import > "OWL Import" to "Term Tree OWL Import"
Applied in changeset commit:taxeditor|8e6b3b25d268778b6fd3e90a28fe1c3fa9a62e3b. Katja Luther
01:33 PM bug #8780 (Closed): Repair sortindex does not work on TermTree index
seems to work, now. Katja Luther
01:10 PM bug #8790 (In Progress): Update measurement units for existing quantitative data missing a unit
Andreas Müller
01:08 PM task #8672: Source handling during (distribution) aggregation
This might be partly implemented in 5.12 already. If fully fixed revert milestone to 5.12 Andreas Müller
01:05 PM feature request #8677 (Resolved): Add distribution aggregation to set subtree menu
Moved open issues to #8811
Review needed for **this** ticket.
Andreas Müller
01:04 PM task #8811 (New): Open issues for "Add distribution aggregation to set subtree menu"
copied from #8677
* disable rank fields in case aggregation should run only on the 1 selected taxon (and not on s...
Andreas Müller
12:55 PM bug #8788 (Feedback): Cloned descriptions do not show up in dataportal anymore
Is this still an open issue? I somehow remember that you have worked on it at the beginning of the year. Andreas Müller
12:23 PM feature request #6812: Improve TaxEditor download site
Issues open here? Andreas Müller
12:19 PM bug #8809 (Closed): CdmLight Export area without level results in NPE
Katja Luther
11:29 AM bug #8809 (Resolved): CdmLight Export area without level results in NPE
Applied in changeset commit:cdmlib|5996b524f4493fa800a843769a45061f497e4b1a. Katja Luther
11:27 AM bug #8809 (Closed): CdmLight Export area without level results in NPE
Areas without a level throwing a NPE. Katja Luther
11:33 AM bug #8737 (Closed): delete taxon included in two classifications deletes taxonname
this works now as expected Andreas Kohlbecker
11:29 AM task #8130: Check if related feature data is cleared when supported facts type is changed
I guess this is not yet fixed. Andreas Müller
11:24 AM bug #8808 (Closed): Cdm-Light Export fix name identifier export
I won't review as it takes too much time. I guess feedback from WGB should be enough. Andreas Müller
11:19 AM bug #8808 (Resolved): Cdm-Light Export fix name identifier export
Katja Luther
11:17 AM bug #8808 (Closed): Cdm-Light Export fix name identifier export
mail WB:
Hallo Katja,
noch eine Frage zum (derzeitigen) CDM-light output: Kann es sein, dass in die NameIdentifie...
Katja Luther
11:23 AM EDIT Platform Etablierung task #8722 (Closed): Provide Manuals and Dokumentation for the Kurs „Integrated Taxonomy“ WiSe 20...
Andreas Kohlbecker
11:23 AM EDIT Platform Etablierung task #8727 (Closed): Test Workshop workflow
Andreas Kohlbecker
11:22 AM EDIT Platform Etablierung task #8704 (Closed): Test specimen import via BioCase and write documentation
Andreas Kohlbecker
11:20 AM feature request #8759 (Resolved): Description aggregation : suppress state present when more deta...
please review Andreas Kohlbecker
10:14 AM bug #8797 (Closed): Navigator tree collapse after moving taxon node
This works as expected now. Andreas Müller
10:12 AM feature request #8807 (Closed): description page: Adapt table header to the nature of descriptio...
Andreas Kohlbecker
10:12 AM feature request #8807 (Resolved): description page: Adapt table header to the nature of descript...
Applied in changeset commit:cdm-dataportal|0e414cc1ad6b178dd09a57eed2bd47d25d07677a. Andreas Kohlbecker
09:48 AM feature request #8807 (Closed): description page: Adapt table header to the nature of descriptio...

ich sehe gerade, dass die Tabelle die Überschrift „States“ hat in der 2. Spalte. Das ist nicht ganz richtig, da d...
Andreas Kohlbecker
09:59 AM bug #8806: Multiple representations problem on saving Desriptive Data Set
If this is reproducable it should be fixed soon. Andreas Müller

01/15/2020

04:55 PM feature request #8759 (In Progress): Description aggregation : suppress state present when more d...
Andreas Kohlbecker
04:39 PM bug #8733: Descriptive data set: Specimens of a newly added taxon are not listed in Select Specim...
I updated the ticket description to give some more details on what is did exactly.
Even if there are multiple ways...
Andreas Kohlbecker
04:33 PM bug #8806 (Worksforme): Multiple representations problem on saving Desriptive Data Set
This is reproducible each time:
**preparation*
* connect to caryophyllales_spp (version from 2019-12-06) - avai...
Andreas Kohlbecker
03:18 PM bug #8797 (Resolved): Navigator tree collapse after moving taxon node
now before refresh the navigator remembers the expanded elements and reopens them after refresh Katja Luther
01:48 PM bug #8797 (Feedback): Navigator tree collapse after moving taxon node
For me the problem still exists. No matter if I use d&d or menu or if I move within a classification or to another cl... Andreas Müller
03:09 PM bug #8511 (Closed): The structure path in the character details view should have a line break
This works as expected Andreas Müller
03:00 PM feature request #8805 (Closed): In distribution editor synoms should be available as concatenated...
For searching for synonym names the distribution editor should have an additional column with the concatenated synonyms. Katja Luther
02:24 PM bug #8804 (Worksforme): taxeditor hangs when creating a new classification
Reproducible with the latest cdm-server and Taxeditor Version: 5.12.0-SNAPSHOT, Build Date: 2020-01-15 **11:50 CET** ... Andreas Kohlbecker
02:06 PM bug #8804: taxeditor hangs when creating a new classification
I can't reproduce it on my local db. And the recursion seems to be something on library side in PermissionEvaluator Katja Luther
01:56 PM bug #8804: taxeditor hangs when creating a new classification
I tested again locally with another DB where it also occurs ....
will test also on the test server, but this will re...
Andreas Kohlbecker
01:40 PM bug #8804: taxeditor hangs when creating a new classification
Can you please test on test/nightly also. This is our reference system for ticket reviews etc. Ofcourse we also need ... Andreas Müller
01:35 PM bug #8804: taxeditor hangs when creating a new classification
Andreas Müller wrote:
> I can't reproduce this. Can you give more information. I created classifications in multiple...
Andreas Kohlbecker
01:17 PM bug #8804: taxeditor hangs when creating a new classification
I can't reproduce this. Can you give more information. I created classifications in multiple DBs and it worked.
Whic...
Andreas Müller
01:08 PM bug #8804: taxeditor hangs when creating a new classification
I put this into the current milestone since it is really an awful regression.
This issue is really critical and mayb...
Andreas Kohlbecker
01:05 PM bug #8804 (Worksforme): taxeditor hangs when creating a new classification

~~~
[caryophyllales_spp] 13:04:59,556 DEBUG [qtp759156157-135][or.sp.we.se.DispatcherServlet] - DispatcherServle...
Andreas Kohlbecker
01:57 PM feature request #8656 (Closed): [DISCUSS] Should only characters be allowed for DescriptiveDataSe...
This is fixed with the new implementation. Andreas Müller
01:44 PM bug #8801 (Closed): Deselected menu items are not reactivated in navigator
Works as expected now Andreas Müller
01:21 PM bug #8737: delete taxon included in two classifications deletes taxonname
Please test on test/caryo_spp. #8804 is not valid for at least this DB (at least on my pc). Andreas Müller
01:13 PM bug #8737: delete taxon included in two classifications deletes taxonname
review blocked by #8804 Andreas Kohlbecker
01:19 PM bug #8746 (Rejected): Multiple representations problem on saving Matrix Editor
this MRE did not occur again so far. Andreas Kohlbecker
12:51 PM feature request #7701 (New): Add link to typified name on specimen page of data portal
this is still an open issue:
http://test.e-taxonomy.eu/dataportal/preview/phycobank/cdm_dataportal/occurrence/8236...
Andreas Kohlbecker
12:46 PM bug #8745 (Feedback): Type designations of synonyms missing on specimen page
do you have an example link? Andreas Kohlbecker
12:38 PM task #8683 (Closed): TaxonDaoHibernateImpl.countTaxaByName rename parameter authorship authorshi...
Andreas Kohlbecker
12:36 PM bug #8731 (Closed): BioCase Specimenimport: empty result list and SWTException:Invalid thread acc...
obviously works since this import has been used very often in the preparation phase for the workshop and in the works... Andreas Kohlbecker
11:46 AM bug #8736 (In Progress): LazyInitializationException (LIE) during adding Specimens to Matrix Editor
The LIE is apparently fixed but I received another exception:
Server side:
~~~
[caryophyllales_spp] 11:42:48,5...
Andreas Kohlbecker
11:13 AM feature request #8803 (Resolved): Add "per mm²" to measurement units
Applied in changeset commit:cdmlib|a65a935cd5279773ac1d32f98e4be04ecd5ea065. Andreas Müller
11:08 AM feature request #8803 (Closed): Add "per mm²" to measurement units
This is needed for some Cactaceae characters Andreas Müller

01/14/2020

03:21 PM bug #8684 (Closed): ITaxonService.findTaxaByName misses initStrategy Parameter
Andreas Kohlbecker
03:21 PM bug #8684: ITaxonService.findTaxaByName misses initStrategy Parameter
also tested on t edit-test and confirmed that the service is working now
~~~
http http://test.e-taxonomy.eu/cdmse...
Andreas Kohlbecker
01:56 PM bug #8684 (Resolved): ITaxonService.findTaxaByName misses initStrategy Parameter
the webservice is now working, tested with:
~~~
http :8081/portal/taxon/doFindByNameParts.json genusOrUninomial=...
Andreas Kohlbecker
11:31 AM feature request #8802 (In Progress): Implement flowering period for Flora of Cyprus
Andreas Müller
11:31 AM feature request #8802 (Closed): Implement flowering period for Flora of Cyprus
(was "Blütezeiten")
This includes a new DescriptionElement subclass "TermporalData" and a new TimePeriod subclass ...
Andreas Müller

01/13/2020

05:32 PM bug #8684 (In Progress): ITaxonService.findTaxaByName misses initStrategy Parameter
testing the web service (locally with the caryophlalles_spp database):
~~~
http :8081/portal/taxon/doFindByNamePa...
Andreas Kohlbecker
05:11 PM bug #8719 (Closed): installation profile 'CDM_Portal' causes Integrity constraint violation: 1048...
as this problem did no longer occur we can close this issue. Andreas Kohlbecker
05:10 PM task #8716 (In Progress): Configure taxeditor to run with GTK2 in linux
Andreas Kohlbecker
05:07 PM feature request #8686 (Closed): Support CdmLink sources in bibliography
fragment removed from links - closing ticket. Andreas Kohlbecker
04:56 PM feature request #8771: display of average value with precision so that it differs from min and m...
By now we are having quite good solution, and I suggest to close this issue. Please move further requirements and wis... Andreas Kohlbecker
04:16 PM feature request #8771: display of average value with precision so that it differs from min and m...
Andreas Kohlbecker wrote:
> Andreas Müller wrote:
> > 3 Verbesserungsvorschläge:
> >
> Derzeit ist u.A. vor al...
Andreas Kohlbecker
04:06 PM feature request #8771: display of average value with precision so that it differs from min and m...
Andreas Müller wrote:
> 3 Verbesserungsvorschläge:
>
> * Avg, StdAbw und Var nur ausblenden bei min=max, wenn Avg...
Andreas Kohlbecker

01/10/2020

10:55 AM bug #8800 (Closed): If supplemental data view shows reference it is not possible to select anothe...
I could not reproduce this error anymore, so we can close it. Katja Luther
10:54 AM bug #8801: Deselected menu items are not reactivated in navigator
please review Katja Luther

01/09/2020

01:12 PM feature request #8771: display of average value with precision so that it differs from min and m...
Andreas Müller wrote:
> Die Zeile verstehe ich nicht:
>
> $precision += $precision < 0 ? - 1 : 1;
>
> Waru...
Andreas Kohlbecker
12:30 PM feature request #8771: display of average value with precision so that it differs from min and m...
Die Zeile verstehe ich nicht:
$precision += $precision < 0 ? - 1 : 1;
Warum muss die Richtung der Präzision...
Andreas Müller
12:04 PM feature request #8771: display of average value with precision so that it differs from min and m...
Example on test/cactaceae:
http://test.e-taxonomy.eu/dataportal/preview/caryophyllales_spp/cdm_dataportal/descript...
Andreas Müller
12:01 PM feature request #8771 (Resolved): display of average value with precision so that it differs from...
Applied in changeset commit:cdm-dataportal|8480271c782d1cce2fffdb4cb95b0f30d9367712. Andreas Kohlbecker
11:47 AM feature request #8771: display of average value with precision so that it differs from min and m...
Is there an example page available? Andreas Müller
11:46 AM feature request #8771 (Feedback): display of average value with precision so that it differs from...
3 Verbesserungsvorschläge:
* Avg, StdAbw und Var nur ausblenden bei min=max, wenn Avg=min(=max) bzw. StdAbw und Va...
Andreas Müller
11:29 AM feature request #8771: display of average value with precision so that it differs from min and m...
Hallo,

der Fall x=0 ist der Fall min=max. => avg=min(=max). Also trivial, die Dezimalstellen sollten die gleich...
Andreas Kohlbecker
11:09 AM feature request #8771: display of average value with precision so that it differs from min and m...
please review Andreas Kohlbecker
11:08 AM feature request #8771 (Resolved): display of average value with precision so that it differs from...
Applied in changeset commit:cdm-dataportal|793df79047e8716b03d8ba09feeec495d5f410aa. Andreas Kohlbecker

01/08/2020

05:48 PM task #8786 (Resolved): Display of mean value with min max
Done!
The trivial case where only one value exists or when Min = Max or when TypicalLowerBoundary = TypicalUpperBo...
Andreas Kohlbecker
03:32 PM task #8786: Display of mean value with min max
ich habe in der Ticketbeschreibung nochmals alles zusammengefasst Andreas Kohlbecker
03:22 PM task #8786: Display of mean value with min max
Sieht gut aus.

Kleine Anmerkung: ich bin mir nicht sicher, ob wir immer eine Sample Size haben. Gerade bei de...
Andreas Kohlbecker
03:22 PM task #8786: Display of mean value with min max
Hallo,

Könnten wir den bis-Strick jeweils in die Klammer hinein nehmen, das ist die gebräuchlichere Variante?...
Andreas Kohlbecker
03:21 PM task #8786: Display of mean value with min max
Achso, ne, wollten wir nicht eckige Klammern um den Mittelwert? Und die Frage steht noch aus, ob in die eckigen Klamm... Andreas Kohlbecker
03:21 PM task #8786: Display of mean value with min max
um sicher zu gehen, dass wir jetzt wirklich vom Selben sprechen.

Das Beispiel aus der Ticket Beschreibung (1....
Andreas Kohlbecker
10:28 AM task #8786: Display of mean value with min max
Hallo Norbert,

wie gesagt, finde ich unschön, dass es sprachabhängig ist (in einem Deutschen Portal müssten w...
Andreas Kohlbecker
10:27 AM task #8786: Display of mean value with min max
Hallo Andreas,

ja, hab ich auch so gefunden, wäre ich auch mit einverstanden. Ich hatte "mean" ausgeschrieben...
Andreas Kohlbecker
10:27 AM task #8786: Display of mean value with min max
Hallo,

vielleicht ist „x bar“ x̄ noch besser. Das sollte mathematisch eindeutig sein.
μ wird wohl auch man...
Andreas Kohlbecker
10:26 AM task #8786: Display of mean value with min max
Hallo Andreas,

Mittelwert: ja, solche Details der Darstellung hatte wir noch gar nicht besprechen können.
...
Andreas Kohlbecker
10:25 AM task #8786: Display of mean value with min max
Hallo,

es kann gut sein, dass die Schreibweise mit dem Mittelwert zwischen den Min und Max Werten nicht abges...
Andreas Kohlbecker
03:14 PM feature request #8771: display of average value with precision so that it differs from min and m...
Eine Funktion zum runden oder trunkieren nach signifikanten Stellen gibt es in php nicht aber in diesem Stackoverflow... Andreas Kohlbecker
02:59 PM feature request #8771: display of average value with precision so that it differs from min and m...

Hallo,

der Vorschlag die Differenz Max - Min für die Berechnung der signifikanten Stellen des Mittelwertes ...
Andreas Kohlbecker
02:57 PM feature request #8771: display of average value with precision so that it differs from min and m...
Eigentlich ist das entscheidende ja, wie weit min und max von einander entfernt sind. Bei 98-190 reicht eine Zahl ohn... Andreas Kohlbecker
02:56 PM feature request #8771: display of average value with precision so that it differs from min and m...
Weitere Beispiele für die Ticket-Beschreibung Andreas Kohlbecker
01:29 PM bug #8800 (Resolved): If supplemental data view shows reference it is not possible to select anot...
Applied in changeset commit:cdmlib|db7b0ee79b966b68a1d2958214303d4b101f1022. Andreas Müller
12:32 PM bug #8800: If supplemental data view shows reference it is not possible to select another reference
I checked Walters log-file (see below). So he also got an error in ReferenceDaoHibernateImpl.getUuidAndTitle but in a... Andreas Müller
12:14 PM bug #8800: If supplemental data view shows reference it is not possible to select another reference
AM:
Das klingt ein bisschen wie der Fehler den ich gestern mit dem nicht möglichen Aufrufen des Referenzdialoges f...
Andreas Müller
09:31 AM bug #8800 (Closed): If supplemental data view shows reference it is not possible to select anothe...
mail WB:
Hallo,
ich habe ein merkwürdiges Problem beim Editieren einer Referenz, und zwar sowohl aus dem Bulk Edi...
Katja Luther
12:19 PM bug #8801: Deselected menu items are not reactivated in navigator
Being resolved this can go into 5.12, correct? Andreas Müller
11:15 AM bug #8801 (Resolved): Deselected menu items are not reactivated in navigator
Katja Luther
11:15 AM bug #8801: Deselected menu items are not reactivated in navigator
the problem seems to be that the menu items are submenu items of "edit subtree" and when for all menu items visibilit... Katja Luther
09:33 AM bug #8801 (Closed): Deselected menu items are not reactivated in navigator
mail AM:
noch ein Problem. Wenn ich ein Multiselect auf Taxa im Navigator mache wird das Set for Subtree Menü di...
Katja Luther

01/07/2020

04:50 PM feature request #8787: Improve layout for ExactValue on Description Pages
Andreas Kohlbecker wrote:
> Implemented.
>
> I did not change the separator to semicolon since we are using the ...
Andreas Müller
04:35 PM feature request #8787 (Resolved): Improve layout for ExactValue on Description Pages
Implemented.
I did not change the separator to semicolon since we are using the comma already for separating all ...
Andreas Kohlbecker
04:30 PM feature request #8787: Improve layout for ExactValue on Description Pages
implemented in commit:cdm-dataportal|88e622d25 Andreas Kohlbecker
03:48 PM feature request #8787 (In Progress): Improve layout for ExactValue on Description Pages
Andreas Kohlbecker
03:47 PM feature request #8787: Improve layout for ExactValue on Description Pages
[norbert wrote]
ich sehe keine Notwendigkeit einen exact value besonders zu kennzeichnen, bin für semikolon-separ...
Andreas Kohlbecker
03:39 PM feature request #8787 (Feedback): Improve layout for ExactValue on Description Pages
Rauten stehen nach meinem Verständniss üblicherweise für "Nummer" oder "Anzahl", damit eine "Exact Value" zu kennzeic... Andreas Kohlbecker
04:42 PM feature request #8798 (Resolved): description page: Show character hierarchy
done Andreas Kohlbecker
01:45 PM feature request #8798 (Resolved): description page: Show character hierarchy
The hierarchy character of the characters in the chracter tree should be visualized in the description table Andreas Kohlbecker
04:16 PM task #8799 (New): [PESI][E+M] [Discuss] Use reference author instead of (sec)-reference for (Spec...
Other databases in PESI use only the expert name (e.g. http://www.eu-nomen.eu/portal/taxon.php?GUID=urn:lsid:marinesp... Andreas Müller
03:42 PM task #8786: Display of mean value with min max
[Norbert wrote:]
Noch zu der Darstellung der Werte mit Mittelwert. Wenn ich mich richtig erinnere, waren wir uns e...
Andreas Kohlbecker
11:49 AM bug #8774 (In Progress): Reimplement term tree editors to implement the general save strategy
Katja Luther

01/06/2020

12:31 PM bug #8797 (Resolved): Navigator tree collapse after moving taxon node
please review Katja Luther
12:28 PM bug #8797 (Closed): Navigator tree collapse after moving taxon node
mail Nadja:
Liebe alle,
ich habe einen Bug festgestellt, der das Arbeiten extrem verlangsamt:
Verschiebt man...
Katja Luther
 

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