Activity
From 11/08/2019 to 12/07/2019
12/07/2019
- 06:11 PM bug #8312 (In Progress): Test, fix, improve and run Transmission engine for E+M
- 06:07 PM feature request #6352 (Duplicate): Add Transmission Engine trigger to Admin menu
- 09:57 AM Revision ff19d87a (cdmlib): ref #8679 add done() to monitoring if unexpected exception occurred.
- 09:57 AM Revision 49c84c83 (cdmlib): add getNameCache(name, tagRules) to INameCacheStrategy
12/06/2019
- 10:04 PM bug #8754 (Resolved): DescriptionElements are not deleted with the Descriptive Data Set
- Based on the dump and situation in #8752:
* deleted both descriptive datasets
* delete the Character trees (for p... - 09:53 PM bug #8753 (Closed): EagerLoadingException on opening Character Tree Editor after deleting all Desciptive Data Sets
- Based on the dump and situation in #8752:
* deleted both descriptive datasets
* Immediately open the Character T... - 09:44 PM bug #8752 (Worksforme): Matrix Editor: Can fail showing all SpecimenDescriptions in the dataset
- It seems as if the DescriptiveDataset has been corrupted somehow.
1. I removed all "specimens" from the matrix at ... - 06:19 PM bug #8747 (New): Matrix Editor: Can not unset categorical data
- I don't consider this as user friendly. Is this default behavior of the nattable?
Since there are check boxes in t... - 12:21 PM bug #8747 (Resolved): Matrix Editor: Can not unset categorical data
- You have to hold CTRL and select the chosen state again to de-select.
- 06:16 PM bug #8746: Multiple representations problem on saving Matrix Editor
- Patrick Plitzner wrote:
> Did you just enter categorical and quantitative data?
> Did you only enter data for this... - 12:23 PM bug #8746 (Feedback): Multiple representations problem on saving Matrix Editor
- Did you just enter categorical and quantitative data?
Did you only enter data for this one specimen?
Did you edit a... - 04:03 PM Revision 66de5a6c (taxeditor): ref #8450 Fix refresh after changes
- 03:44 PM bug #8744 (Resolved): LazyInitializationException (LIE) saving the Character Editor
- This seems to be fixed now by using merge(). We still have to have a look at TermTreeEditor which currently still use...
- 02:05 PM bug #8744: LazyInitializationException (LIE) saving the Character Editor
- hmm, it does not really seem to be the problem, but I found that there seems no session to be defined
 saving the Character Editor
- After changing the users such that only 1 user was attached to all data like TermRelation, DefinedTermBase, TermVocab...
- 01:13 PM bug #8744: LazyInitializationException (LIE) saving the Character Editor
- We need to test the behavior if data is edited with different users, it seems like at least one user (former user - u...
- 01:11 PM bug #8744: LazyInitializationException (LIE) saving the Character Editor
- I do not understand how we can have a LIE within a save. With save all objects should be within the session by Merge....
- 03:42 PM bug #8751 (Duplicate): Replace saveOrUpdate() in AbstractTermTreeEditor
- Unexpectedly saveOrUpdate() is used instead of merge().
Currently, if you change to merge() an exception is thrown... - 03:36 PM Revision 64be1450 (taxeditor): ref #8744 Use merge in CharacterEditor.save()
- 02:18 PM Revision 1cfa8b28 (taxeditor): update layer doc
- 01:58 PM Revision fe281c15 (taxeditor): ws for biocase provider moved
- 01:41 PM feature request #8750 (New): Write tests for service layer methods getting the specimens for an assiociated taxon
- The service method for getting all specimen for an associated taxon needs tests:
The method should return all spec... - 01:27 PM Revision b9f38c00 (taxeditor): ref #8749: sort elements of vocabulary combo
- 01:18 PM bug #8748 (In Progress): Supported state vocabularies should be ordered
- Now there is a filter for the combo boxes.
- 11:17 AM bug #8748 (Closed): Supported state vocabularies should be ordered
- For characters there is a long list of state vocabularies now. Therefore they are difficult to find in the dropdown. ...
- 01:17 PM feature request #8749 (Duplicate): Add proposalProvider to AbstractComboElement
- 01:15 PM feature request #8749 (Closed): Add proposalProvider to AbstractComboElement
- To provide the filter to all combo elements add the proposalProvider to the AbstractComboElement.
This is used for... - 01:16 PM Revision a5a9ec69 (taxeditor): ref #8749: add proposalProvider to combo elements
- 11:59 AM feature request #7071: Reenable restore functionality
- Idea:
* After CdmStore has connected invoke "open Part" command on saved editors.
* EditorInput/UUID can be sav... - 09:20 AM Revision cbf13384 (taxeditor): ref #8677: rank combo contains rank of selected taxon
12/05/2019
- 05:20 PM bug #8747 (New): Matrix Editor: Can not unset categorical data
- Once categorical data state has been set in a cell this cell can not be made blank
- 05:01 PM bug #8744 (In Progress): LazyInitializationException (LIE) saving the Character Editor
- 04:59 PM bug #8744 (Resolved): LazyInitializationException (LIE) saving the Character Editor
- Applied in changeset commit:taxeditor|5fa6172961481d22d6282abc10b4c350fe1c8bce.
- 04:58 PM Revision 5fa61729 (taxeditor): fix #8744 Fix LIE while saving character editor
- 04:38 PM bug #8746 (Rejected): Multiple representations problem on saving Matrix Editor
we did several edits in the matrix for multiple specimens.
Last edit was setting the the state for leave architect...- 04:33 PM bug #8745 (Resolved): Type designations of synonyms missing on specimen page
- please review
- 04:31 PM bug #8745 (Closed): Type designations of synonyms missing on specimen page
- Type designations of synonyms are missing in the compressed specimen page.
mail NK:
Es geht darum, dass von den... - 04:30 PM Revision ca25238c (cdmlib): fix missing type designations of synonyms on specimen page
- 04:26 PM Revision 64c04c7d (taxeditor): ref #8450 Fix refresh of character tree after adding characters
- 04:25 PM Revision a494d916 (cdm-dataportal): add class name to type designation exception
- 04:23 PM Revision 5fedf5d5 (taxeditor): ref #8450 Do not show sec reference in matrix
- 02:57 PM Revision 3c162754 (cdmlib): ref #8679 top level error handling and renaming aggregation methods
- 02:36 PM Revision 851664fd (cdmlib): ref #8679 try to fix progress tasks and percentage not showing up
- 02:35 PM Revision 9cabea44 (cdmlib): cleanup
- 02:20 PM feature request #8677 (In Progress): Add distribution aggregation to set subtree menu
- Open issues:
* ~~highest rank should include the rank of the selected taxon~~
* ~~lowest rank should inlcude th... - 02:10 PM Revision e6b6fbe5 (taxeditor): ref #8677 minor tooltip changes
- 08:20 AM Revision c6883acf (cdmlib): ref #8679 Add test for incomplete categorical data
12/04/2019
- 10:40 PM bug #6629 (Closed): TransmissionEngineDistribution misses aggregating Uzebkistan (UZB-OO) to higher rank levels
- NK: Ist jetzt OK.
- 02:34 PM bug #6629 (Resolved): TransmissionEngineDistribution misses aggregating Uzebkistan (UZB-OO) to higher rank levels
- For Acanthoscephalus, Heteroderis, Crepis and Lagoseriopsis the aggregation seems to work now. For Cichorium intybus ...
- 06:57 PM bug #8744 (Closed): LazyInitializationException (LIE) saving the Character Editor
- saving the Character Editor after changing the Character Node details causes an LazyInitializationException every tim...
- 05:58 PM Revision 475575b3 (cdmlib): Fix gcTime calculation
- 05:58 PM Revision 2a71dd1c (cdmlib): ref #8679 Add cancel points for aggregation progress monitor
- 05:58 PM Revision 80c4e54e (cdmlib): ref #8679 Filter out cloned specimen descriptions
- 05:29 PM bug #8743 (New): BioCASE specimen import: ignore invalid biocase accesspoint urls
- This is especially important for the DNA import. If an URL is specified which is not pointing to a BioCase provider t...
- 02:51 PM Revision 724c463a (taxeditor): ref #8677: correct enabling and disabling of elements
- 02:50 PM feature request #8742 (New): Allow deleting vocabularies
- Currently it is not possible to delete a vocabulary if it contains terms.
With OWL import (additivity) it is now pos... - 02:39 PM Revision 5373a0e9 (taxeditor): ref #8677: fix wrong type
- 02:37 PM Revision 80e27bc2 (cdmlib): fix compile error
- 02:28 PM Revision c274b9cc (taxeditor): ref #8677: smaller issues
- 02:18 PM Revision ef976e5a (taxeditor): ref #8677: set default selections, sort combos and other smaller issues
- 02:07 PM Revision 19739293 (cdmlib): ref #8679 rename supports fields and make public
- 02:01 PM Revision aaafab4d (cdmlib): make misappliedName uuid public (needed for PESI)
- 02:01 PM Revision 47992818 (cdmlib): ref #8679 let AggregationMode and AggregationSourceMode implement IKeyTerm and implement some list methods
- 01:37 PM Revision de4502ef (taxeditor): ref #8679 Adapt to cdmlib changes
- 01:20 PM Revision 5ee7595c (cdmlib): ref #8679 move aggregation modes to own class file
- 11:48 AM Revision 25a98c3f (cdmlib): ref #8677: getNamedAreaDTO
- 11:47 AM Revision 629035f4 (cdmlib): ref #8677: getNamedAreaDTO
- 11:18 AM Revision 5bafde13 (cdmlib): ref #8450 Fix quantitative data + add test
- 10:12 AM task #8741 (Closed): Create test for MapServices to test if they support https
- This especially tests if the existing certificate is still valid.
- 09:53 AM Revision 70946cb4 (taxeditor): ref #8677: layout and labeling in aggregation config wizard
- 09:38 AM Revision 882f3d24 (cdmlib): add left join for level in ternmDto sql query
- 09:38 AM Revision 3fb760db (cdmlib): fix cdmlight export test
12/03/2019
- 06:37 PM feature request #8721: Use webservice to get all biocase provider listed by gbif
- I agree with the above. Maybe the title is enough. Users usually recognize a collection by its title not it's service...
- 06:24 PM feature request #8721: Use webservice to get all biocase provider listed by gbif
- The access points should be searchable also by the accesspoint title, For the BGBM Herbarium the webservice lists th...
- 06:32 PM feature request #8740 (New): BioCASE specimen import: implement data set filter in specimen import dialog page 2
- once an access point has been selected in the fist step it should be possible to limit the search to a specific data ...
- 05:31 PM Revision 98fb83d7 (cdmlib): ref #8450 Set max to min if max null and vica versa
- - static method
- 05:28 PM Revision 693b87f5 (cdmlib): ref #8450 Set max to min if max null and vica versa
- 04:35 PM feature request #8657: Order description element in portal according to CharacterTree
- Can you provide an example url?
- 12:14 PM feature request #8657: Order description element in portal according to CharacterTree
- Assignin to you Andreas M.
But maybe also Andreas K. needs to look at the code - 04:34 PM Revision 2fc6f4c0 (cdmlib): set monitor methods to protected in DescriptionAggregationBase
- 04:28 PM Revision a4ca6fce (cdmlib): ref #8679 Add sources to aggregated description
- - within taxon: specimen description
- parent taxon: aggregated taxon description - 03:15 PM feature request #8713 (Resolved): Improve structured descriptive data aggregation
- At least tests exist now and also base class algorithm is used. Can you please review and put open issues into a foll...
- 02:20 PM Revision 20245cca (cdm-dataportal): ref #8595 Do not filter description sources by class
- 02:15 PM bug #8670: Unwanted distribution aggregation/display on 2 levels
- Auch hier bitte einen letzten Check ob noch was offen ist.
Anschließend können wir das Ticket schließen. - 02:14 PM bug #4134: Transmissionengine Distribution seems to miss distributions for higher Taxa
- I think this is fully fixed with the new implementation of the transmission engine (which allows the user to decide t...
- 02:08 PM feature request #5176 (Closed): TransmissionEngineDistribution can run on selected taxa
- This should be fully fixed. As it has been used already and also a TaxEditor UI for using it has been developped I cl...
- 01:49 PM feature request #8472 (Closed): Transmission engine for distribution aggregation needs to be adapted to new DescriptionBase.types
- 01:48 PM Revision 412b2eee (cdmlib): ref #8472 remove final links to old MarkerType.COMPUTED handling
- 01:41 PM task #8468 (Closed): Remove old InapplicableIf tables
- 01:40 PM bug #8738 (Closed): CdmLink.startPos and .endPos should allow Null
- 01:40 PM bug #8702 (Closed): Remove Not null constraint for uuid in AUD tables
- 01:09 PM Revision 03d98738 (taxeditor): ref #8738 , ref #8702 , ref #8468 update TaxEditor test DB
- 01:09 PM Revision bcac7f33 (taxeditor): minor
- 01:07 PM Revision 86493549 (cdm-vaadin): ref #8738 , ref #8702 , ref #8468 update vaadin test DB
- 01:06 PM Revision b9b25534 (cdmlib): ref #8738 , ref #8702 , ref #8468 last changes for 5.12 update script
- 12:30 PM Revision 06d7ad52 (cdm-dataportal): ref #8595 Fix potential null pointer
- 12:21 PM feature request #8714: description page: Show multiple datasets per description as list of links
- To review you would have to manually add a description to multiple datasets in the database. There is no test data li...
- 12:19 PM feature request #8595: Create description detail page
- created new ticket for remaining issues and discussion -> #8739
- 12:17 PM bug #8739 (Closed): remaining issues for description detail page
- Copied from #8595
* Evtl. will man auf aggr. Description von höheren Taxa nicht die Specimen als Quellen anzeigen,... - 09:43 AM Revision dacb449b (cdmlib-apps): minor
- 09:39 AM Revision c64d9f63 (taxeditor): ref #8450 Remove aggregation/summary row
- 09:26 AM Revision ab5959ce (taxeditor): ref #8450 Remove charts and tooltip button
- 09:15 AM Revision 44e7eed6 (taxeditor): ref #8450 Disable re-ordering of columns
- 09:14 AM Revision b533829a (taxeditor): ref #8450 Fix freeze column index
12/02/2019
- 05:32 PM Revision b6143fd1 (cdmlib): cleanup
- 05:24 PM Revision 9f6ce960 (cdmlib): fix potential NPE when retrieving identifiers via type == null
- 04:56 PM Revision 0d1a8c63 (cdmlib): cleanup
- 04:53 PM Revision 1cbe14bb (cdmlib): cleanup
- 04:46 PM Revision 86c08d73 (taxeditor): Add tooltip to TermSearch menu item
- 04:35 PM Revision 287ae15a (taxeditor): ref #8450 Fix matrix taxon node hierarchy
- 03:56 PM Revision 7dd0d600 (cdmlib): ref #8766 Fix potential ArrayIndexOutOfBoundsException
- 03:43 PM Revision 57b6d909 (cdmlib): ref #8468 replace Inapplicable tables in ClearDB files (remaining)
- 03:39 PM Revision f7a5f872 (cdmlib): ref #8766 remove a.level from TermDto SELECT statement
- 03:24 PM Revision dfbe0f52 (cdmlib): ref #8468 replace Inapplicable tables in ClearDB files
- 03:05 PM Revision 2fcd811a (cdmlib): ref #8468 further fix test schema
- 02:19 PM Revision 32d3420e (cdmlib): ref #8468 fix model cache and test sql
- 01:33 PM Revision 69b55e11 (cdmlib): ref #8766: add level to TermDto
- 01:29 PM Revision 07b9b244 (taxeditor): ref #8679 Set taxon node filter and no batch size adaption
- 01:28 PM Revision b1b9414c (cdmlib): typo
- 01:28 PM Revision 34726589 (cdmlib): ref #8679 Add initTransaction() super method
- - hook for initializing object when a new transaction starts
- 01:27 PM Revision 26024c71 (taxeditor): ref #8677: layout issues - continue
- 01:21 PM Revision f67d22e7 (taxeditor): ref #8677: layout issues
- 12:54 PM Revision b58f9986 (cdmlib): minor
- 12:54 PM Revision 9e5a8c54 (cdmlib): ref #8468 fix JAXB for removed inapplicableIF
- 12:31 PM feature request #8433 (Duplicate): Disallow user names with whitespace
- This is a duplicate for #8454 and has been fixed in CDM UML 5.8
- 12:26 PM task #8468 (Resolved): Remove old InapplicableIf tables
- Applied in changeset commit:cdmlib|73391892ccf6af23d1f83357e460ea9b55df4e2d.
- 12:26 PM Revision a2c8f975 (cdmlib): ref #8468 remove old attributes from TermNode
- 12:25 PM Revision 65397e52 (cdmlib): rename TableDroper -> TableDropper
- 12:23 PM Revision 73391892 (cdmlib): fix #8468
- 12:23 PM Revision cdaeac9a (cdmlib): ref #8738 , ref #8702 add update script to remove null constraints from AUD.uuid and CdmLing.endPos (II)
- 12:12 PM bug #8702 (Resolved): Remove Not null constraint for uuid in AUD tables
- 12:12 PM bug #8738 (Resolved): CdmLink.startPos and .endPos should allow Null
- 10:55 AM bug #8738 (Closed): CdmLink.startPos and .endPos should allow Null
- The table was IntextReference before. After using it for class CdmLinkSource also the originally NOT NULL columns mus...
- 12:11 PM Revision dc5a41f6 (cdmlib): ref #8738 , ref #8702 add update script to remove null constraints from AUD.uuid and CdmLing.endPos
- 12:09 PM Revision 38f1e0aa (cdmlib): cleanup
- 12:01 PM Revision c3193e02 (cdmlib): rename SchemaUpdater v5.x packages
- 11:32 AM bug #8737 (Resolved): delete taxon included in two classifications deletes taxonname
- Now there is also the possibility to set the taxonnode configurator to deletetaxon = false. This was missing in the d...
- 09:42 AM bug #8737: delete taxon included in two classifications deletes taxonname
- please review.
- 09:35 AM bug #8737 (Closed): delete taxon included in two classifications deletes taxonname
- when deleting a taxon used in two classifications, the taxon still exist, but the name is deleted. This is because of...
- 11:28 AM Revision a66ea40a (taxeditor): ref #8737: add possibility to delete taxonnode wizard for only delete taxonnode
- 10:35 AM bug #8733: Descriptive data set: Specimens of a newly added taxon are not listed in Select Specimen dialog of the matrix editor
- This ticket is complex. In the ticket description is not written HOW the taxon is added. In general the underlying se...
- 08:24 AM bug #8733 (Feedback): Descriptive data set: Specimens of a newly added taxon are not listed in Select Specimen dialog of the matrix editor
- Currently the specimens listed in the specimen selection dialog are cached after the first time opening the dialog be...
- 08:40 AM feature request #8665 (Resolved): Rename "New" to "New Tree" in Term Tree editors
- Applied in changeset commit:taxeditor|210af90ccae0c45e1234bdb8fe216285293546c6.
- 08:40 AM Revision 210af90c (taxeditor): fix #8665 Show human readable term type in new tree string
- 08:37 AM bug #8732 (Duplicate): Descriptive Data Set Navigator: label not refreshed after change in Descriptive Dataset Editor
- This is already solved for release 5.12 with #8661
Please validate with the current nightly build. - 08:15 AM Revision 6f4db5c3 (taxeditor): remove system.out
- 07:40 AM Revision 9a2d6065 (cdmlib): ref #8679 Set batchMinFreeHeap in test setup
11/29/2019
- 05:17 PM bug #8736 (Closed): LazyInitializationException (LIE) during adding Specimens to Matrix Editor
- To reproduce:
* use database: caryophyllales_spp (cactaceae)
* create new Descriptive Dataset (non specimens so f... - 04:27 PM Revision 73f2833f (cdmlib-apps): cleanup
- 04:20 PM Revision b4e7eccb (cdmlib-apps): #3945 move some PESI classes to new packages and minor issues
- 04:09 PM task #7976 (In Progress): [PESI][ERMS] Erms taxon import
- 04:09 PM task #8509 (In Progress): [PESI][ERMS] Export ERMS data to PESI
- 04:06 PM task #8577 (In Progress): [PESI][E+M] Validation for E+M export
- 03:35 PM bug #8735 (Duplicate): Character Node Editor: allow line breaks at slashes in structure representation
The line wrapping does not work for long structure representation. Breaks only happen where the term labels contain...- 01:48 PM Revision 45ca2f16 (cdmlib): ref #8679 Replace existing description elements in re-aggregation
- -add test for re-aggregation
- 12:58 PM Revision 91f2c632 (cdmlib): ref #8679 Load dataset in each session
- 11:28 AM task #8734 (Closed): Update distributions from TDWG-L4 to TDWG-L3 where L4=L3
- 10:34 AM task #8734 (In Progress): Update distributions from TDWG-L4 to TDWG-L3 where L4=L3
- SQL to use
~~~
UPDATE DescriptionElementBase deb
INNER JOIN DefinedTermBase a ON deb.area_id = a.id
INNER JOIN ... - 10:33 AM task #8734 (Closed): Update distributions from TDWG-L4 to TDWG-L3 where L4=L3
- This will shorten the textuell representations of distribution data in the data portal
- 01:49 AM bug #8731 (Resolved): BioCase Specimenimport: empty result list and SWTException:Invalid thread access in search results
- now it works again with the nightly build.
- 12:47 AM bug #8731 (In Progress): BioCase Specimenimport: empty result list and SWTException:Invalid thread access in search results
- This is strange, I can not reproduce this with an editor started from the workspace, also when using the actual git d...
- 01:44 AM Revision c11b0cd2 (taxeditor): data cleaning
- 01:30 AM Revision 7b017c3e (taxeditor): test other exception handling
- 01:07 AM Revision 947597cb (cdmlib): fix test
- 12:32 AM Revision 5adfd05a (taxeditor): ref #8731: minor
- 12:11 AM Revision 9b954e94 (cdmlib): add check for taxon and name in test
- 12:03 AM Revision 25f62069 (cdmlib): fix delete problems of taxa used in multiple classifications
11/28/2019
- 06:57 PM bug #8733 (Closed): Descriptive data set: Specimens of a newly added taxon are not listed in Select Specimen dialog of the matrix editor
- to reproduce
1. create Descriptive data set in caryophyllales_spp
* adding *Rhipsalis pilocarpa* by drag and dro... - 06:33 PM bug #8732 (Duplicate): Descriptive Data Set Navigator: label not refreshed after change in Descriptive Dataset Editor
- just exactly what is written in the subject.
- 03:55 PM Revision ec07174a (cdmlib-apps): fix E+M Activator
- 03:54 PM Revision 46ae6d5a (taxeditor): ref #8679 Set taxon node filter and aggregation mode
- 03:54 PM Revision 7079d656 (cdmlib-apps): cleanup
- 03:53 PM Revision 456a8f57 (taxeditor): Fix potential NPE
- 03:52 PM Revision 2adab869 (cdmlib-apps): update BgbmInstancesUpdater
- 03:45 PM bug #8731: BioCase Specimenimport: empty result list and SWTException:Invalid thread access in search results
- An import of specimens is not possible wit the current code base in the development branch.
- 03:40 PM bug #8731 (Closed): BioCase Specimenimport: empty result list and SWTException:Invalid thread access in search results
- I am not sure about the timing of the situation in which this exception occurred.
I was searching the `http://ww3.... - 03:31 PM Revision 2b226eee (cdmlib): ref #8679 Add checks and repairs for valid quantitative data
- 03:31 PM Revision 2bc176df (cdmlib): Enhance toString()
- 03:31 PM Revision 33373464 (cdmlib): ref #8679 Remove usage of apache commons math
- 03:23 PM bug #8730 (New): OWL Term export progress monitor reports wrong process percentage
- The initial percentage is really funny:
 - 12:30 PM Revision 4bbc2279 (cdmlib): minor
- 12:29 PM bug #8720: blank perspective after using "Switch User"
- the perspective looked like this:
today is the first day this is not happening for quite ... - 12:05 PM bug #8720: blank perspective after using "Switch User"
- I am not sure if I fully understand the problem. When I try to change the user I get the "Taxonomic" perspective but ...
- 12:18 PM Revision 7903d041 (cdmlib): ref #8679 PropertyPath and code cleanup
- 12:18 PM Revision 5ef244fc (cdmlib): ref #8679 Convert to base class aggregation architecture
- - convert aggregation of quantitative data to parent
- convert aggregation of categorical data to parent - 12:18 PM Revision ba1bc425 (cdmlib): Enhance toString()
- 12:18 PM Revision 93c52359 (cdmlib): ref #8679 Convert to base class aggregation architecture
- - init dataset in preAccumulate
- filter SpecimenDescriptions by data set - 12:18 PM Revision 185e63ee (cdmlib): ref #8679 Convert to base class aggregation architecture
- - convert aggregation of quantitative data within taxon
- 12:18 PM Revision 54ed2cf2 (cdmlib): ref #8679 Add apache commons math to pom
- 12:18 PM Revision 497e4d3a (cdmlib): add toString()
- 12:18 PM Revision 1f0292f8 (cdmlib): ref #8679 Convert to base class aggregation architecture
- - convert aggregation of categorical data within taxon
- 12:18 PM Revision 1eb0391c (cdmlib): Add count to toString()
- 11:51 AM bug #8729: Refresh Taxon Navigator after Specimen import
- Seems to be very similar to #8659. So we may think about putting it also to 5.12. Katja, what do you think?
- 10:54 AM bug #8729 (New): Refresh Taxon Navigator after Specimen import
- After a successful specimen import vi BioCASE Provider the Taxon Navigator is not being refreshed.
New created Clas... - 11:03 AM Revision 0e6482c8 (cdmlib): ref #8724 fix JAXB for CdmLink
- 10:04 AM Revision 4cda0d0e (cdmlib): ref #7623: fix NPE
- 09:34 AM bug #8728: Specimen import via BioCASE silently fails
- Andreas Kohlbecker wrote:
> The problem in one specific case was that the user was not permitted to update a person:... - 09:26 AM bug #8728: Specimen import via BioCASE silently fails
- Next Problem:
~~~
[CREATE] not permitted for 'kurs1' on TaxonNode[uuid:79c3deac-ee1d-4622-91fa-746be0894161', toS... - 08:51 AM bug #8728: Specimen import via BioCASE silently fails
- The problem in one specific case was that the user was not permitted to update a person:
~~~
[UPDATE] not permitt...
11/27/2019
- 04:42 PM bug #8728: Specimen import via BioCASE silently fails
- As the import works without problems with the `admin` user, it seems as if this is a permission problem.
@Katja: 1... - 04:24 PM bug #8728: Specimen import via BioCASE silently fails
- this is reproducible
once this error has occurred the taxeditor has to be restarted, otherwise further import atte... - 04:15 PM bug #8728 (New): Specimen import via BioCASE silently fails
- ABCD Specimen import via BioCASE provider silently fails
Logged in as user with GAs: `Editor` + `TAXONNODE.[CREATE... - 03:39 PM EDIT Platform Etablierung task #8727 (In Progress): Test Workshop workflow
- 03:21 PM EDIT Platform Etablierung task #8727 (Closed): Test Workshop workflow
- **Use the simple editor user accounts: kurs1..5**
The section of taxa to test the workflow with is based in the ... - 03:00 PM Revision 700aa970 (cdmlib): Fix potential NPE
- 02:58 PM Revision 5a36818d (cdmlib): ref #8724 handle taxon in CdmLinkSource
- 02:39 PM feature request #8686: Support CdmLink sources in bibliography
- Further more there is a discussion if links to taxa should be direct links from the description(element) to the taxon...
- 02:38 PM feature request #8686: Support CdmLink sources in bibliography
- Support for link to taxa has been added in #8724. So we need to check or implement that also links to taxa are handle...
- 02:36 PM feature request #8724 (Resolved): Allow OriginalSource to link to Taxon
- 02:25 PM feature request #8724 (Closed): Allow OriginalSource to link to Taxon
- When aggregating (or moving) data one may want to link to the taxon the data originally comes from so we need a possi...
- 02:35 PM feature request #8726 (New): the search preference search field should be a list
- The preference defining the search field should be not a single value, but a list of fields on which the seach should...
- 02:34 PM feature request #8725 (Feedback): Add abbreviation to namedArea text field in distribution details view
- Some named areas have the same label therefore it would be nice to show an abbreviation like idInVoc. This should be ...
- 02:31 PM Revision 35a4f2f3 (cdmlib): ref #8724 add Taxon to ICdmTarget
- 02:31 PM Revision 41e8eb66 (cdmlib): minor
- 02:28 PM Revision de51cd68 (cdmlib): ref #7623: improve gathering agent parsing and query generation
- 02:24 PM Revision f084efb4 (taxeditor): ref #8677: layout issues in aggregation dialog
- 09:41 AM feature request #8721 (In Progress): Use webservice to get all biocase provider listed by gbif
- The prefilled combo and the filtering for entered text is implemented in the specimen dialog now.
- 09:38 AM Revision 14a62f14 (taxeditor): ref #8721: use webservice to get all biocase provider
- 09:18 AM Revision cf6340d0 (cdmlib): ref #8679 Test leaf color
- 09:11 AM bug #8723 (Worksforme): Distribution detailsview: changing the area removes the state
- When changing the area of a distribution the status is not displayed anymore. But the distribution still has the stat...
- 08:57 AM Revision 5125fb32 (cdmlib): fix NPE in media rights part of biocase import
- 07:31 AM Revision eace364b (cdmlib): ref #8679 Add leaf color
11/26/2019
- 06:41 PM Revision 6b6ebf81 (cdmlib): ref #8679 Refactoring
- 06:16 PM Revision 4bf5063f (cdmlib): ref #8679 Add specimen to sibling taxon
- 05:48 PM Revision c14bf2dc (cdmlib): Avoid empty description elements
- 05:09 PM Revision 9af9bac7 (taxeditor): ref #8679 adapt TaxEditor to changes in DescriptionAggregation dataset handling
- 05:06 PM Revision 3177d9fb (taxeditor): ref #8679 adapt TaxEditor to changes in DescriptionAggregation dataset handling
- 05:01 PM Revision f34d4889 (cdmlib): adapt TestAggregations to areaUuidList (2)
- 04:45 PM Revision 79e76c25 (cdmlib): adapt TestAggregations to areaUuidList
- 04:42 PM Revision ab856113 (cdmlib): update TestAggregations
- 04:39 PM Revision 672c7781 (cdmlib): Avoid empty description elements
- 04:32 PM Revision 84b66dd2 (cdmlib): cleanup
- 04:32 PM Revision d22d2ab0 (cdmlib): ref #8679 add tests to StructuredDescriptionAggregation and fix toGrandParent issue and allow Feature
- 04:09 PM EDIT Platform Etablierung task #8722 (Closed): Provide Manuals and Dokumentation for the Kurs „Integrated Taxonomy“ WiSe 2019/20
- Documentation needed for the Kurs:
* Matrix-Editor manual - is being prepared ...
* List of user accounts for dem... - 03:59 PM EDIT Platform Etablierung task #8712 (Closed): Kurs "Integrated Taxonomy" : prepare setup for workshop computers
- 03:01 PM Revision 1520e79e (cdmlib): implement another possibility of gathering agent text in abcd (agentText)
- 02:53 PM feature request #8721 (Closed): Use webservice to get all biocase provider listed by gbif
- For the specimen search it would be nice to have a list of all biocase provider. (Jörg provided us a webservice)
W... - 01:39 PM Revision 515150ac (cdmlib): ref #8677: revert a change of last commit
- 12:58 PM Revision ff7c0745 (cdmlib): ref #8677: use changes DistributionAggregationConfig in controller
- 12:31 PM Revision 68362152 (taxeditor): ref #8677: add distribution aggregation as long running task to editor - continue
- 12:10 PM Revision 44ba5690 (taxeditor): ref #8677: add distribution aggregation as long running task to editor
- 12:10 PM Revision 421a91e6 (taxeditor): smaller changes in specimen import view
- 12:08 PM Revision 26cfae1e (cdmlib): ref #8677: use uuid list instead of namedArea list in DistributionAggregationConfig
- 10:43 AM bug #8720 (New): blank perspective after using "Switch User"
- When switching the user *General > Switch User* all views and editors are closed, making the perspective blank. After...
- 09:19 AM bug #8719 (Resolved): installation profile 'CDM_Portal' causes Integrity constraint violation: 1048 Column 'pages' cannot be null
- Applied in changeset commit:cdm-dataportal|56d39875a598bad7e9c7591d5436b0ac63160cae.
- 08:23 AM bug #8719 (Closed): installation profile 'CDM_Portal' causes Integrity constraint violation: 1048 Column 'pages' cannot be null
- this bug has been discovered in the process of automatic creation of workshop servers (`server-scripts/workshop-setup...
- 09:19 AM Revision 56d39875 (cdm-dataportal): fix #8719 add missing page and cache values for new blocks in installation profile
- 12:01 AM Revision 775d38e1 (cdmlib): ref #8469 avoid merge to singular branches
11/25/2019
- 10:54 PM Revision 9415e8dd (cdmlib): cleanup
- 10:53 PM Revision dd864603 (cdmlib): ref #8469 fix min max issue
- 07:32 PM Revision ca93e81e (cdmlib): ref #8469 handle all sub-branch taxa on the level they belong to
- 02:51 PM feature request #8460: Show examples in text field
- Try to implement a base functionality.
This is already implemented in taxon search. - 12:14 PM Revision d1504e5a (cdmlib): ref #8469 first handling of taxa covering all subbranches, but probably wrong approach
- 12:14 PM Revision 85d65189 (cdmlib): ref #8469 fix no feature left, prepare taxon covering all subbranches, cleanup
- 12:14 PM Revision cde6a65d (cdmlib): cleanup
- 09:00 AM Revision ab96570c (cdmlib): ref #8713 Only add aggregated cat. data if states are present
- 08:52 AM Revision c8def030 (cdmlib): ref #8450 Only add aggregated quant. data if data present
11/23/2019
11/22/2019
- 10:06 PM Revision ad5bae70 (cdmlib): cleanup
- 10:06 PM Revision ad8460be (cdmlib): ref #8679 preliminary fix failing test for rank aggregation with absent status
- 09:18 PM Revision f6fda820 (cdmlib): ref #8679 remove old COMPUTE marker and move ignore lists to configurator and some cleanup
- 01:27 PM bug #8718: polytomousKey page: better handling of invalid uuids
- Patrick, this is relevant for additivity (currently PKs get a new uuid with every generation) so we may think about m...
- 12:53 PM bug #8718 (Closed): polytomousKey page: better handling of invalid uuids
- ich habe gerade gesehen, dass ein PolyKey, wenn dessen uuid nicht stimmt unschöne Fehler schmeißt:
http://test.e-t... - 10:43 AM Revision 1b7e1801 (cdm-dataportal): ref #8595 Fix moved method invocation
- 10:41 AM Revision eb89b236 (cdm-dataportal): ref #8595 Fix feature table when no data available
- 10:38 AM Revision 5ac909c0 (cdm-dataportal): ref #8595 Only show available datasets label when data available
- 12:12 AM Revision 8e29c4cc (cdmlib): ref #8469 introduce KeyTaxon to allow multiple data and multiple descriptions per taxon
11/21/2019
- 05:19 PM Revision 9b434f6a (cdm-dataportal): ref #8657 moving description methods to description.inc
- 05:13 PM Revision ab025781 (cdm-dataportal): ref #8686 removing linebreaks from description labels and simlifying render_cdm_description()
- 04:16 PM task #8716 (Resolved): Configure taxeditor to run with GTK2 in linux
- please report if you are having any problems due to the switch to GTK2
- 04:09 PM task #8716: Configure taxeditor to run with GTK2 in linux
- Andreas Kohlbecker wrote:
> as documented in https://wiki.eclipse.org/SWT/Devel/Gtk/GtkVersion the gtk version can b... - 04:03 PM task #8716 (In Progress): Configure taxeditor to run with GTK2 in linux
- as documented in https://wiki.eclipse.org/SWT/Devel/Gtk/GtkVersion the gtk version can be set via
~~~
--launcher... - 01:12 PM task #8716 (Closed): Configure taxeditor to run with GTK2 in linux
- Der Taxeditor verwendet SWT in der Version 3.105.3.v20170228-0512 (Id: org.eclipse.swt, Version: 3.105.3.v20170228-05...
- 04:15 PM Revision 2279c433 (taxeditor): ref #8716 setting GTK to version 2 in the product launcher configuration
- 04:13 PM Revision c7e854d5 (cdm-dataportal): ref #8595 Only show feature table when data available
- 03:58 PM bug #8717 (New): Improve display of PolytomousKey nodes which have a feature
- If a PKN has a feature and not a statement it is repeated multiple times for the child alternatives. A better layout ...
- 03:58 PM Revision 9078b9c6 (cdm-dataportal): ref #8686 fixing refactoring bug
- 03:29 PM bug #8313 (Feedback): Multiple categorical data get deleted when clicked on in Character Matrix
- Reopen as it happens again.
How to reproduce: in any categorical cell select 2 states. Leafe the cell (it shows bo... - 03:21 PM feature request #8714 (Resolved): description page: Show multiple datasets per description as list of links
- Applied in changeset commit:cdm-dataportal|cf89f7e20f7cbd623d7d373bbf9061003f175179.
- 11:42 AM feature request #8714 (Resolved): description page: Show multiple datasets per description as list of links
- A description can have multiple descriptive data sets. These define which features are displayed and in which order.
... - 03:21 PM Revision cf89f7e2 (cdm-dataportal): fix #8714 Show list of available datasets when description has multiple
- 02:59 PM Revision 185dfa24 (cdmlib): ref #8469 fix multiple dependencies for 1 parent feature issue
- 02:57 PM Revision 92a7f32b (cdmlib): cleanup
- 02:38 PM feature request #8595 (Resolved): Create description detail page
- 02:33 PM Revision 16515bdf (cdm-dataportal): ref #8595 Add creation date for cloned source descriptions
- 02:32 PM Revision 9705e44e (cdm-dataportal): ref #8657 Avoid null in URL
- 02:07 PM Revision 424a2bee (cdmlib): ref #8469 use FeatureState in PolytomousKeyGenerator
- 02:00 PM Revision 1e16407a (cdm-dataportal): ref #8657 Use link icon for descriptions, taxa and specimens
- 01:47 PM Revision 875d5c3b (cdm-dataportal): ref #8657 Add taxon information to description detail page
- 01:23 PM Revision 7e99b1ac (cdm-dataportal): ref #8657 Remove $linkText parameter
- 01:19 PM Revision ea0ae3c7 (cdm-dataportal): ref #8657 Add descriptive data set information to description detail page
- 12:53 PM Revision fe3a5674 (cdm-dataportal): ref #8686 showing CdmLink sources - initial implementation, needs improvement
- 12:35 PM task #8468 (In Progress): Remove old InapplicableIf tables
- 12:21 PM feature request #8715: Make 'delete Taxonnode' a lonrunning task
- Deleting nodes can take some time and results in connection warnings or timeouts. This can be solved by running the d...
- 12:16 PM feature request #8715 (New): Make 'delete Taxonnode' a lonrunning task
- 11:49 AM Revision 51133f9a (cdmlib): ref #8469 filter non-character data
- 11:49 AM Revision 3f678339 (cdmlib): cleanup PolytomousKeyGenerator
- 10:46 AM Revision c0d26dcf (cdmlib): logging of canceled import
- 10:46 AM Revision b6f0e806 (cdmlib): ref #8673 extend initstrategy by cdmSource for ref #8686
- 10:32 AM Revision 16a4ba6a (cdmlib): minor
- 10:11 AM Revision e0fce64c (cdmlib): ref #8713 add test class for StructuredDescriptionAggregation
- 08:58 AM Revision 6d2d9cf5 (cdmlib): ref #8713 add test class for StructuredDescriptionAggregation
- 08:19 AM feature request #8713 (Closed): Improve structured descriptive data aggregation
- * Tests
* Remove empty categorical data creation
* use base class algorithm from #8679
* TBC - 02:26 AM Revision e434b808 (cdmlib): ref #8469 better handling of empty or null CategoricalData
11/20/2019
- 11:54 PM Revision 7e2ee71e (cdmlib): cleanup
- 11:54 PM Revision b73be607 (cdmlib): Some more monitoring during StructuredDescriptionAggregation
- 05:11 PM EDIT Platform Etablierung task #8689: Export Flora of Greece Bupleurum using Cdm2Cdm export
- I change Project and milestone as it is mostly data related.
- 03:37 PM EDIT Platform Etablierung task #8689 (Closed): Export Flora of Greece Bupleurum using Cdm2Cdm export
- The data looks complete and did not cause any errors when opening the taxa in the editor.
I consider this issue as... - 05:01 PM feature request #8281 (Closed): Doubtful flag for TaxonNode
- E+M data updated
~~~
UPDATE TaxonNode
Set unplaced = 0, doubtful = 1
WHERE unplaced = 1
~~~
also for _AUD - 05:00 PM feature request #8686 (In Progress): Support CdmLink sources in bibliography
- 04:59 PM Revision 6527c2f5 (cdm-dataportal): php-doc: return value
- 04:51 PM EDIT Platform Etablierung task #8711 (Closed): add additivity ontologies to the bupleurum database
- completed a dump is stored at edit-test:/root/cdm_test_bupleurum-2019-11-20-001.sql.bz2
- 01:25 PM EDIT Platform Etablierung task #8711 (Closed): add additivity ontologies to the bupleurum database
- the ontology can be downloaded from https://cybertaxonomy.eu/download/data/ontology/additivity/
the characters mus... - 04:24 PM feature request #8657 (Resolved): Order description element in portal according to CharacterTree
- 02:19 PM Revision c2138217 (taxeditor): german i18n for "Descriptive Data Set"
- 02:04 PM Revision e7b6e47a (cdmlib): remove possibility to define aggreaged distributions on description element level
- 02:04 PM Revision 65bc38bc (cdmlib): cleanup
- 02:04 PM Revision b11aa70a (cdmlib): cleanup
- 01:54 PM Revision 8eaf9b31 (cdmlib): abcd import: avoid potential NPE and emtpy authors
- 01:32 PM EDIT Platform Etablierung task #8712 (Closed): Kurs "Integrated Taxonomy" : prepare setup for workshop computers
* We will be using the edit-demo-2 server for the Kurs "Integrated Taxonomy"
* prepare database: - **DONE**
...- 12:58 PM task #8710: Decide if sub-area Preference and/or status order preference rule
- relevant code:
~~~
define('CDM_DISTRIBUTION_FILTER_DEFAULT', serialize(
array(
'filter_rules' => array(
'statu... - 12:57 PM task #8710: Decide if sub-area Preference and/or status order preference rule
- Probably needs discussion with users.
- 12:56 PM task #8710 (New): Decide if sub-area Preference and/or status order preference rule
- Currently they are switched of in default dataportals.
The setting can be found in the portal settings on the genera... - 12:47 PM Revision d3ac3ea7 (cdmlib): ref #8657 Extend property path for description init strategy
- 12:41 PM Revision b6fb9923 (cdmlib): Revert "ref #8657 Add (remote) service for ordered description elements by tree"
- This reverts commit 7af2c90016dd6215526a732c2d5d8b281c779d0f.
- 12:40 PM Revision a38c0718 (cdm-dataportal): ref #8657 Retain hierarchy information of description elements
- - remove web service for flat ordered list
- 12:10 PM feature request #8709 (New): Show last selected name in selection dialog of name in source
- mail Eckhard v. Raab-Straube:
was auch nett wäre: wenn sich der Editor bei der Auswahl des „name in source“ an die... - 12:05 PM feature request #8708 (Duplicate): Sort taxa in distribution editor same as in navigator
- mail Eckhard v. Raab-Straube:
Hallo,
zum Verbreitungseditor:
wenn man den Verbreitungseditor von einem höher... - 12:03 PM feature request #8707 (New): Use NAT Table for specimen search result
- The search result for the specimen search contains not all informations needed. Therefore it should be shown in a NAT...
- 11:45 AM feature request #8706 (Closed): taxeditor error report with timestamps
- Wie wäre es wenn wir dem Fehlerprotokoll mal einen Timestamp spendierten? Damit wäre es leichter den Fehler einem bes...
- 01:35 AM bug #8670 (Resolved): Unwanted distribution aggregation/display on 2 levels
- Dieses Ticket hat primär mit der Kartenanzeige und nicht mit der Aggregation zu tun. Bei der Kartenanzeige gibt es di...
11/19/2019
- 11:12 PM task #8671: Distribution in E+M (BM) on different levels
- AM
Die Regel klingt erstmal sinnig und einfach. Ich habe allerdings gerade mal eine DB Abfrage gestartet, wie viel... - 11:05 PM task #8671: Distribution in E+M (BM) on different levels
- ERS:
die Anzeige ist so korrekt. Wenn ein Unterareal vorhanden ist, soll das höhere Areal nicht angezeigt werden, ... - 05:16 PM task #8671 (In Progress): Distribution in E+M (BM) on different levels
- 05:38 PM bug #6629 (In Progress): TransmissionEngineDistribution misses aggregating Uzebkistan (UZB-OO) to higher rank levels
- 05:31 PM feature request #8661 (Closed): "New DataSet" should ask for label and then open the dataset
- Works fine
- 05:28 PM feature request #8703 (Closed): Move TermSearch and Specimen(Import)Search to editor area of taxeditor
- Works fine. Thanks.
- 02:46 PM feature request #8703 (Resolved): Move TermSearch and Specimen(Import)Search to editor area of taxeditor
- Applied in changeset commit:taxeditor|0b7e08834f03d3e7ce2ea6c1f55c908a14d76758.
- 02:28 PM feature request #8703 (Closed): Move TermSearch and Specimen(Import)Search to editor area of taxeditor
- 05:27 PM bug #8705 (New): While specimen are loaded from provider the specimen list in specimen search should show "loading"
- to indicate that the search is not yet ready.
- 05:25 PM feature request #8665 (Feedback): Rename "New" to "New Tree" in Term Tree editors
- The problem in the ticket description is solved. Ticket can be closed.
Something I found when testing:
Can we u... - 05:19 PM Revision cd10bbf6 (cdmlib): ref #8517 handle protected fieldunit titlecache in DerivedUnitFacadeFieldUnitCacheStrategy and not in DerivedUnitFacadeCacheStrategy - fix compile error
- 05:18 PM bug #8670 (In Progress): Unwanted distribution aggregation/display on 2 levels
- 05:15 PM task #8672 (In Progress): Source handling during (distribution) aggregation
- 04:59 PM bug #7665: ConcurrentModificationException when closing Editor
- I think it happens still from time to time.
- 04:57 PM feature request #3836 (Closed): Implement modifiers and modifying text for Description Elements in TaxEditor
- I think I tested this in the context of #8226 and I think it worked.
- 04:54 PM EDIT Platform Etablierung task #8704 (In Progress): Test specimen import via BioCase and write documentation
- 04:52 PM EDIT Platform Etablierung task #8704 (Closed): Test specimen import via BioCase and write documentation
**TODO:**
* test specimen import via BioCase in taxeditor - **DONE and succesful**
* documentation **DONE**- 04:46 PM bug #8517 (Resolved): SpecimenOrObservation: data from protected titleCache missig in portal pages
- Sorry, I was not exact in my comment. I meant to move it from DerivedUnitFacadeCacheStrategy to DerivedUnitFacadeFiel...
- 04:42 PM Revision 10fda345 (cdmlib): ref #8517 handle protected fieldunit titlecache in DerivedUnitFacadeFieldUnitCacheStrategy and not in DerivedUnitFacadeCacheStrategy
- 04:42 PM Revision d0eb3b5b (cdmlib): cleanup
- 04:18 PM EDIT Platform Etablierung report #8556 (Closed): sifting of existing documentation
- 04:16 PM EDIT Platform Etablierung task #8578 (Closed): Discuss and find appropriate terms for major editor parts (window, view, editor, panel, pane)
- This task in complete since we have now a good naming strategy which should be acceptable for almost anybody:
".... - 04:08 PM bug #8243: Cdm Cache uses a lot of disk space
- The description states that the increase of diskspace usage happened in seconds "*free disk space to 100% full in sec...
- 03:59 PM bug #8702: Remove Not null constraint for uuid in AUD tables
- query in information_schema to find such columns
~~~
SELECT *
FROM COLUMNS c
WHERE c.COLUMN_NAME = 'uuid' AND ... - 03:21 PM bug #8702: Remove Not null constraint for uuid in AUD tables
- I updated most production DBs manually already.
- 01:47 PM bug #8702 (Closed): Remove Not null constraint for uuid in AUD tables
- Some databases do have uuid NOT NULL contraints in some _AUD tables. In caryo_spp I found the following tables with t...
- 03:24 PM feature request #8694 (Closed): Specimen online import - Specimen Search: import button layout problem on linux KDE
- perfectly solved!
- 02:42 PM feature request #8694 (Resolved): Specimen online import - Specimen Search: import button layout problem on linux KDE
- 02:46 PM Revision 0b7e0883 (taxeditor): fix #8703 Open term search and specimen (import) search to editor area
- 02:13 PM Revision 56036a0c (taxeditor): ref #8694: layout issues in specimen import view
- 01:54 PM bug #7683: external links Audit table should allow uuid to be null
- We need an update script for all cases where AUD tables still have uuid NOT NULL: #8702
- 12:40 PM bug #8621: Do not save empty sources
- the same should be implemented for identifiers and others
- 12:32 PM bug #8701 (New): Toggle button in GBIF Specimen import does not toggle but is select all/none
- Toggle usually inverts the current selection. But the toggle button in the specimen import does either select all or ...
- 12:07 PM feature request #8700: Geofilter for DescriptiveDataSets should be used for taxon nodes AND specimens
- This needs to be configurable.
One issue to solve is that specimen data often use other area vocabularies then ta... - 11:27 AM feature request #8700 (New): Geofilter for DescriptiveDataSets should be used for taxon nodes AND specimens
- Currently only the taxon nodes are filtered with a TaxonNodeFilter
- 11:08 AM bug #8699 (New): Add menu item to accepted name to set as basionym
- mail Eckhard von Raab-Struabe:
wie kann man eigentlich im Freitext-Editor den akzeptierten Namen als Basionym der ... - 11:02 AM Revision ad8c4e9b (cdmlib): add ORCID iD as IdentifierType
- 10:30 AM feature request #8698: Sort order in status drop down of distribution editor
- Es sollte auf jeden Fall neben einer alphabetischen Sortierung auch eine geben, die sich an der Sortierung im Vokabul...
- 09:56 AM feature request #8698 (New): Sort order in status drop down of distribution editor
- Mail Eckhard von Raab-Straube:
Hallo,
eine weitere Sache:
kann ich die Reihenfolge der Statusangaben im Drop... - 01:11 AM Revision 973bd95e (cdmlib-apps): ref #8689 some updates to BupleurumExportActivator
- 01:10 AM Revision daf61d74 (cdmlib): ref #8689 fix issus in Cdm2Cdm import and add "removeImportSource" configuration
- 01:09 AM EDIT Platform Etablierung task #8689 (Resolved): Export Flora of Greece Bupleurum using Cdm2Cdm export
- This should be ready. Database is stored at cdm_test_bupleurum on edit-test. Please review.
- 12:33 AM Revision cb3810d6 (cdmlib-apps): ref #8689 some updates to BupleurumExportActivator
11/18/2019
- 10:07 PM bug #8696 (New): ehcahe discstore conflict when using the taxeditor with multiple users on the same system
- The diskstore must be created in user specific subfolders of the system temp folder.
We should consider creating a... - 06:33 PM feature request #8695 (New): Specimen online import - provider selection should remember last choise
- During the specimen online import the choice made in the provider selection always is reset to GBIF.
If the custom p... - 05:39 PM feature request #8694 (Closed): Specimen online import - Specimen Search: import button layout problem on linux KDE
- The import button seems to have a negative offset:
 - 05:36 PM feature request #8693 (New): Specimen online import - Specimen Search: show number of result items
- The count of specimens which are found by BioCase search should be shown in the Specimen Search View.
- 05:33 PM bug #8692 (New): Specimen online import is slow
- Importing ~200 Specimens via Import > Specimen > Specimen online took more than one hour for about 200 specimens
*... - 04:29 PM bug #6484: Include all paramaters of FindOccurrencesConfigurator in HQL query
- Ok, this makes it much clearer. I will have a look if this can be implemented somehow.
- 03:50 PM bug #6484: Include all paramaters of FindOccurrencesConfigurator in HQL query
- This configurator is used in a lot of places: specimen tree editor, specimen facet search (experimental), TaxonServic...
- 03:08 PM bug #6484: Include all paramaters of FindOccurrencesConfigurator in HQL query
- Can you give some more information about context (specimen tree, matrix, dataportal, ...?) and other information requ...
- 04:02 PM bug #6036: Problems with deleting type names
- Is this still an open issue?
- 04:00 PM bug #6182: Emptying protolog URI does not work
- Protologues soon will be handled as OriginalSourceBase.externalLink, so not so important to fix
- 03:58 PM bug #6585: Combo menu items have orange font
- Is this still an open issue? Please also check on linux.
- 03:56 PM feature request #6760: specimen import configuration
- Is this still an open issue/duplicate/related to other tickets?
- 03:53 PM Revision eba2d1f7 (cdmlib): typo
- 03:35 PM feature request #6676: A user with READ access to taxa but WRITE access to factual data cannot update the factual view via the name editor
- I think this is something you are working on anyway.
- 03:33 PM feature request #6866: Improve specimen page
- Can you please relate this ticket with other tickets on this issue (specimen page)?
- 03:01 PM bug #6545 (Closed): [MASTER] Eclipse 4 bugs
- 02:52 PM bug #7512: Saving in Specimen Tree View creates unwanted scrolling on windows
- Can you please test if you can reproduce?
- 02:39 PM bug #8129 (Closed): Load images asynchronously in media details view
- 02:38 PM bug #8129: Load images asynchronously in media details view
- There is a follow up ticket #8691
- 02:36 PM bug #8691 (New): Remaining issues for asynchronous image loading
- see #8129 for open issues
- 02:33 PM bug #7911 (Worksforme): Changing areas in Distribution Editor yields to wrong column labels
- Is probably fixed.
- 02:31 PM bug #7686 (Resolved): Specimen title cache issues in data portal specimen table
- Please check what is still open
- 01:55 PM feature request #4511 (Rejected): Remove white space below EntitySelectionElement
- 01:39 PM feature request #4484: Evaluate publish flag for derivates in data portal
- There is probably a duplicate somewhere. Ticket has some importance for GBOL specimen.
- 12:41 PM Revision 29b21170 (cdmlib): add orcid and doi to identifier table
- 11:42 AM bug #1924: CIHORIEAE in-references in Footnotes
- found in old Email from 2010:
----
"als Diskussionsbeitrag schicke ich auch Dir noch unsere Richtschnur für Lit... - 10:40 AM feature request #8690 (New): DistributionTreeDTO and TreeNodeDTO implemented for description/distributionInfoFor/{uuid} webservice
- The responses of the `/portal/description/distributionInfoFor/{uuid}` web-service can get quite huge for aggregated d...
- 09:39 AM Revision f574c105 (cdmlib): revert some of the last changes
- 09:28 AM Revision 38969108 (cdmlib-apps): ref #8651 adapt EuroMedActivator to changes in DistributionAggregation/TransmissionEngine
- 09:27 AM Revision c49b3877 (cdmlib-apps): ref #8689 move Cdm2Cdm migration classes from cdm-pesi to cdmlib-io and add BupleurumExportActivator
- 09:19 AM Revision 25516d86 (cdmlib): ref #8689 revert unwanted commited files
- 09:18 AM Revision 77281e25 (cdmlib): ref #8689 Cdm2Cdm import from app-import to cdmlib-io
- 09:18 AM EDIT Platform Etablierung task #8689 (Closed): Export Flora of Greece Bupleurum using Cdm2Cdm export
- 09:16 AM Revision b37495b9 (cdmlib): ref #8679 move DistributionAggregation functionality to base class
- 09:14 AM Revision 9c0a55dd (cdmlib): cleanup
- 12:03 AM feature request #8472: Transmission engine for distribution aggregation needs to be adapted to new DescriptionBase.types
- Close only if run on cichorieae (and others?) and the tmp code removing existing "Computed" markers is not needed any...
- 12:02 AM feature request #8472 (Resolved): Transmission engine for distribution aggregation needs to be adapted to new DescriptionBase.types
- Should be fixed now.
11/16/2019
- 12:30 PM Revision c5fa3edd (cdm-dataportal): ref #8657 Add webservice call to cdm_api.module
- 12:32 AM Revision 2acab840 (cdmlib): ref #8679 improve monitoring
- 12:05 AM Revision a8496b29 (cdmlib): ref #8679 improve tests
11/15/2019
- 10:49 PM Revision 7800d0d0 (cdmlib): ref #8679 generic source handling with SourceModes
- 10:46 PM feature request #8688: Make OriginalSourceBase.cdmSource visible in TaxEditor
- Please decide who could be assignee. It would be nice to have it soon.
- 10:46 PM feature request #8688 (Closed): Make OriginalSourceBase.cdmSource visible in TaxEditor
- The field OriginalSourceBase.cdmSource is usually filled during aggregations (for now). Therefore it does not need to...
- 10:26 PM bug #8687 (New): Description page must show all DescriptionElement subclasses
- Currently it seems to show only Categorical and Quantitative Data. But one never knows what data will really come wit...
- 10:14 PM feature request #8686 (Closed): Support CdmLink sources in bibliography
- OriginalSourceBase has the new attribute cdmSource. In original source this can exist instead of citation. Currently ...
- 07:01 PM Revision c8424393 (cdmlib): cleanup
- 07:01 PM Revision 008371ae (cdmlib): ref #8679 move AggregationMode to ConfiguratorBase
- 06:07 PM Revision 7af2c900 (cdmlib): ref #8657 Add (remote) service for ordered description elements by tree
- 03:49 PM task #8679 (In Progress): Further unify description aggregation methods
- 03:30 PM feature request #8677: Add distribution aggregation to set subtree menu
- I updated the above list
- 03:09 PM feature request #8677: Add distribution aggregation to set subtree menu
- Katja Luther wrote:
> In #6352 the mentioned configuration is:
>
> * lowerRank - default: UnknownRank = 5c4d6755... - 02:31 PM feature request #8677: Add distribution aggregation to set subtree menu
- In #6352 the mentioned configuration is:
* lowerRank - default: UnknownRank = 5c4d6755-2cf6-44ca-9220-cccf8881700... - 03:00 PM Revision 4ced804f (cdmlib): Allow wild cards in term facet search
- 02:59 PM Revision c7dfbd8b (taxeditor): Do not search with empty search string in facet search
- 01:43 PM bug #8517: SpecimenOrObservation: data from protected titleCache missig in portal pages
- Andreas Müller wrote:
> This seems to work but handling the protected title cache of the **field** unit in the **der... - 01:31 PM bug #8681 (In Progress): Fix sect. parsing
- 01:04 PM Revision 9235bde5 (cdmlib): ref #8679 fix rerun DistributionAggregation with changed sources and deleted distributions
- 01:01 PM task #8651 (Closed): Unify description aggregation methods (distribution and structured descriptive data)
- 01:01 PM task #8651: Unify description aggregation methods (distribution and structured descriptive data)
- Andreas Kohlbecker wrote:
> Andreas Müller wrote:
>
> > AK and PP as you have developed the orginal classes maybe... - 12:55 PM bug #8570 (Closed): PolytomousKeyNode.otherNode missing in REST service response
- Works as expected.
- 12:43 PM bug #8622 (Closed): Missing specimen Identifier leads to empty brackets in portal
- I tested the above mentioned pages and they look fine.
- 12:10 PM bug #8685 (Closed): Exception when calling DwC-A Export
- 12:09 PM bug #8685 (Closed): Exception when calling DwC-A Export
- mail:
Dear Andreas,
I enclose the error message I get from EDIT when I try to export the data in DwC-A format.
... - 10:55 AM Revision ed98102a (cdmlib-apps): ref #8651 adapt EuroMedActivator to changes in DistributionAggregation/TransmissionEngine
- 10:54 AM Revision 83146769 (cdmlib-apps): ref #8684 fixing compile errors in cdm-pesi
- 10:49 AM Revision fd9dc38f (cdmlib): cleanup and minor
- 10:49 AM Revision 18d9b6eb (cdmlib): ref #8684 fixing compile errors in cdmlib-persistence
- 10:48 AM Revision 7d451c51 (cdmlib): fix potential NPEs in ABCD import
- 10:21 AM bug #8684 (Resolved): ITaxonService.findTaxaByName misses initStrategy Parameter
- Applied in changeset commit:cdmlib|36a4a34fab6ca46f2d4b5c3707d55c2e2078e442.
- 10:21 AM task #8683 (Resolved): TaxonDaoHibernateImpl.countTaxaByName rename parameter authorship authorshipCache
- Applied in changeset commit:cdmlib|ca3e66ff9cd00985c5175e8a38ba8eab64063a13.
- 10:21 AM Revision 36a4a34f (cdmlib): fix #8684 adding initStratery to ITaxonService.findTaxaByName
- 09:57 AM Revision ca3e66ff (cdmlib): fix #8683 TaxonDaoHibernateImpl.countTaxaByName rename parameter authorship authorshipCache
- 09:49 AM Revision c4fb8d80 (cdmlib): fixing scary string compare bug
- 09:34 AM Revision e23faa0a (taxeditor): Remove experimental status for additivity related UI parts
- 09:28 AM Revision 3a88b57a (taxeditor): ref #8656 i18n for loading label
- 09:26 AM Revision 390ef5ac (taxeditor): ref #8656 Update label if matrix loadiung failed
- 09:06 AM feature request #8661 (Resolved): "New DataSet" should ask for label and then open the dataset
- Applied in changeset commit:taxeditor|a61d053e67fceb35c6cfb0065d08651c09b002e6.
- 09:05 AM Revision a61d053e (taxeditor): fix #8661 "New DataSet" should ask for label and then open the dataset
- 08:29 AM feature request #8665 (Resolved): Rename "New" to "New Tree" in Term Tree editors
- Applied in changeset commit:taxeditor|c127cb13020855f630fc93b36842e45d063997e0.
- 08:29 AM Revision c127cb13 (taxeditor): fix #8665 Rename menu item label
11/14/2019
- 05:16 PM task #8651: Unify description aggregation methods (distribution and structured descriptive data)
- Andreas Müller wrote:
> AK and PP as you have developed the orginal classes maybe you want to have a look to the n... - 04:59 PM feature request #8673 (Closed): Allow OriginalSource to link to other CDM objects
- works as expected
- 04:57 PM Revision 524c5307 (taxeditor): Show DescriptionType message instead of toString()
- 04:52 PM bug #8676 (Closed): TaxonDaoHibernateImpl.countTaxaByName misses parameter authorship
- 04:49 PM bug #8684 (Closed): ITaxonService.findTaxaByName misses initStrategy Parameter
- ITaxonService.findTaxaByName misses initStrategy Parameter causing unsolvable LIEs when using via the portal service
... - 04:46 PM task #8683 (Closed): TaxonDaoHibernateImpl.countTaxaByName rename parameter authorship authorshipCache
- 04:42 PM bug #5048 (Closed): cdm-server causes unusual high native memory consumption for jvm
- last remaining subtask copied to #8682. ticket can now be closed.
- 04:40 PM bug #8682 (Closed): cdm-server debian packages configured for jemalloc
- in order to save native memory it is highly recommended to run the cdm-server with `jemalloc` instead of the system ...
- 04:32 PM task #8674 (Closed): configure cdm-server docker image to run with jemalloc
- everything ok!
- 03:49 PM Revision 3411af18 (cdm-server): Merge branch 'release/5.11.0' into develop
- 03:48 PM Revision 38d0d183 (cdm-server): jenkins merging release branch into master (strategy: theirs)
- 03:48 PM Revision 57b234aa (cdm-server): updating poms for branch'release/5.11.0' with non-snapshot versions
- 03:47 PM Revision f90eb6c2 (cdm-webapp): Merge branch 'release/5.11.0' into develop
- 03:47 PM Revision 11deb93a (cdm-webapp): jenkins merging release branch into master (strategy: theirs)
- 03:47 PM Revision 66a333e4 (cdm-webapp): updating poms for branch'release/5.11.0' with non-snapshot versions
- 03:47 PM Revision ffbc80d4 (cdm-webapp): jenkins bumping cdmlib.version and cdm.vaadin.version to 5.11.0
- 03:47 PM Revision cf634b20 (cdm-dataportal): Merge branch 'release/5.11.0' into develop
- 03:46 PM Revision c0b05cbc (cdm-dataportal): updating poms for branch'release/5.11.0' with non-snapshot versions
- 03:46 PM Revision cb5a98c5 (cdm-dataportal): release-preparation: production level css
- 03:46 PM Revision 56b76499 (taxeditor): Merge branch 'release/5.11.0' into develop
- 03:46 PM Revision 62c5bf9d (taxeditor): Merge branch 'release/5.11.0'
- 03:45 PM Revision e5e80f40 (cdm-vaadin): Merge branch 'release/5.11.0' into develop
- 03:45 PM Revision f302dddc (cdm-vaadin): jenkins merging release branch into master (strategy: theirs)
- 03:41 PM Revision 7649bbba (cdm-vaadin): updating poms for branch'release/5.11.0' with non-snapshot versions
- 03:41 PM Revision 0ba1a84a (cdm-vaadin): jenkins bumping cdmlib.version to 5.11.0
- 03:40 PM Revision 0fb9a6f8 (cdmlib): Updating develop poms back to pre merge state
- 03:40 PM Revision 34fc89c8 (cdmlib): Merge branch 'master' into develop
- 03:40 PM Revision 7488b0d6 (cdmlib): updating develop poms to master versions to avoid merge conflicts
- 03:40 PM Revision 458c738d (cdmlib): Merge branch 'release/5.11.0'
- 03:23 PM Revision af102b7d (cdmlib): updating poms for branch'release/5.11.0' with non-snapshot versions
- 02:34 PM bug #8681 (In Progress): Fix sect. parsing
- See open issue in #8253 . Maybe it is a more general problem.
"this is in Rank.java and the map idInVocMap is fil... - 02:32 PM feature request #8253 (Closed): Authors for genus autonyms
- I found the place. And probably fixed it but will not commit before release as it needs to be further tested.
Crea... - 02:19 PM feature request #8253: Authors for genus autonyms
- Andreas Müller wrote:
> Can you give some more information where to find these things? Especially "map of the idInV... - 02:14 PM feature request #8253: Authors for genus autonyms
- Can you give some more information where to find these things? Especially "map of the idInVocMap "
- 02:06 PM feature request #8253 (Feedback): Authors for genus autonyms
- 01:40 PM feature request #8253: Authors for genus autonyms
- I found the cause of the parsing problem:
when searching for the rank by Rank.getRankByIdInVoc(infraGenRankMarker)... - 02:26 PM Revision dd0fb528 (cdm-webapp): jenkins bumping cdmlib.version and cdm.vaadin.version to 5.11.0-SNAPSHOT
- 02:26 PM Revision c4b15330 (cdm-webapp): updating poms for 5.12.0-SNAPSHOT development
- 02:26 PM Revision 281fde70 (cdm-webapp): jenkins bumping cdmlib.version and cdm.vaadin.version to 5.12.0-SNAPSHOT
- 02:25 PM Revision 451335ef (taxeditor): Updated version in pom / project files to taxeditor version : 5.12.0-SNAPSHOT and cdmlib version : 5.12.0-SNAPSHOT
- 02:25 PM Revision fde64bdb (taxeditor): Updated version in pom / project files to taxeditor version : 5.11.0 and cdmlib version : 5.11.0
- 02:23 PM Revision e2ef05a4 (cdm-server): updating poms for 5.12.0-SNAPSHOT development
- 02:23 PM Revision b48c4700 (cdm-vaadin): jenkins bumping cdmlib.version to 5.11.0-SNAPSHOT
- 02:23 PM Revision fd8f8d26 (cdm-vaadin): updating poms for 5.12.0-SNAPSHOT development
- 02:23 PM Revision a12486b5 (cdm-dataportal): updating poms for 5.12.0-SNAPSHOT development
- 02:23 PM Revision 3f458b2b (cdm-vaadin): updating poms for 5.11.0 branch with snapshot versions
- 02:23 PM Revision 82fd6211 (cdm-vaadin): jenkins bumping cdmlib.version to 5.12.0-SNAPSHOT
- 02:21 PM Revision b0cbc440 (cdmlib): updating poms for 5.12.0-SNAPSHOT development
- 02:00 PM Revision f31fdd6b (cdm-dataportal): ref #8673 Fix description title display on taxon page
- 01:15 PM bug #8631 (Closed): ABCD import fails to put new taxa into the classification, create mediaspecimens, etc
- 01:00 PM bug #8631: ABCD import fails to put new taxa into the classification, create mediaspecimens, etc
- It looks ok in KDE!
The ticket can be closed. - 12:25 PM bug #8631: ABCD import fails to put new taxa into the classification, create mediaspecimens, etc
- Andreas Müller wrote:
> It look ok now. Only change I suggest: let the "Biocase provider for DNA" dropdown start at ... - 09:55 AM bug #8631: ABCD import fails to put new taxa into the classification, create mediaspecimens, etc
- It look ok now. Only change I suggest: let the "Biocase provider for DNA" dropdown start at the same horizontal posit...
- 01:00 PM feature request #8667 (Closed): Make Person.orcid editable in TaxEditor
- 12:56 PM feature request #8667 (Resolved): Make Person.orcid editable in TaxEditor
- this is fixed
- 12:54 PM Revision 64090e78 (cdmlib): cleanup
- 12:16 PM Revision 4c0d4268 (cdmlib): cleanup
- 12:15 PM Revision 9449fa3d (cdmlib): ref #8651 useClearExistingDistribution = false as default
- 11:56 AM Revision 91006ade (cdmlib): ref #8651 cleanup DistributionAggregation and remove old computed markers and avoid not saving of descriptions due to readonly
- 11:54 AM Revision 18683dc6 (taxeditor): ref #8631: layout issues
- 11:37 AM Revision f6a63f8b (cdmlib): ref #8673 CdmLinkSourceBeanProsessor disabled and init strategy for cdmSource.target
- 10:57 AM Revision dcc025b4 (taxeditor): use preferencePredicate.EditMapServiceAccessPoint in featureDistribution detailsview
- 10:38 AM Revision 2f1bb433 (taxeditor): cleanup
- 10:07 AM Revision e6287d4a (cdmlib): avoid NPE in dataholder
- 09:59 AM Revision d6dc2032 (cdmlib): smaller issues in abcd import
- 09:55 AM Revision 5e751d05 (cdmlib): minor
- 09:51 AM Revision b0e71e93 (taxeditor): avoid exception when export config does not have userfriendlyIOName
- 09:47 AM Revision 44434863 (cdmlib): add userFriendlyIOName to Dwca Configurator
- 07:54 AM Revision 4e506608 (cdm-dataportal): ref #8673 Fix description title display on taxon page
- 07:46 AM Revision 79e61daa (cdm-dataportal): ref #8673 Adapt more specific description type
- 12:11 AM Revision c1ede4f8 (cdmlib): ref #8651 implement reuse of distributions in DistributionAggregation
11/13/2019
- 10:50 PM Revision 85884141 (cdmlib): ref #8651 further cleanup DistributionAggregation
- 09:55 PM Revision 27dd2015 (cdmlib): fix compile error
- 09:48 PM Revision 0cfec87b (cdmlib): ref #8651 further cleanup DistributionAggregation
- 09:47 PM Revision bd522a58 (cdmlib): cleanup
- 05:26 PM Revision ec44caf9 (cdmlib): ref #8651 cleanup DistributionAggregation
- 05:23 PM Revision 7926167f (cdmlib): cleanup
- 05:21 PM Revision 778d2800 (cdmlib): cleanup ProgressMonitor
- 05:16 PM Revision 2412e7b6 (cdmlib): ref #8673 CdmLinkSourceBeanProsessor proper null handling
- 05:12 PM Revision f5c38c85 (taxeditor): fix possible NPE
- 05:06 PM Revision 3fa32caf (taxeditor): ref #8651 Adapt to finer grained aggregation description type
- 04:31 PM Revision 628c6976 (cdmlib): ref #8673 CdmLinkSourceBeanProsessor to serialize CdmLinkSource as TypedEntityReference
- 03:20 PM feature request #8673: Allow OriginalSource to link to other CDM objects
- CdmLinkSourceBeanProsessor implemented but cannot test since i can't find data with CdmLinkSource
@Patrick: please... - 12:50 PM feature request #8673: Allow OriginalSource to link to other CDM objects
- We still need to check if the empty constructor of CdmLinkSource also could be protected. Patrick could you do this?
- 03:19 PM Revision 019036d1 (cdmlib): ref #8673 CdmLinkSourceBeanProsessor to serialize CdmLinkSource as TypedEntityReference
- 03:07 PM Revision a7df73f0 (cdmlib): ref #8651 cast failing in LINUX
- 02:59 PM Revision 2a00d0b3 (cdmlib): cleanup
- 02:59 PM Revision f24fb983 (cdmlib): ref #8651 fix missing uuid
- 02:50 PM Revision a914faf1 (cdmlib): ref #8651 Introduce new description type "Aggregated Structured Description"
- 02:48 PM Revision 8a7e4037 (cdmlib): cleanup
- 02:37 PM feature request #8680 (New): Unify long running tasks framework
- Long running task are currently implemented at many places and for multiple purposes.
Some things we could do:
... - 02:14 PM Revision 8e1870d6 (cdmlib): cleanup
- 02:09 PM task #8651: Unify description aggregation methods (distribution and structured descriptive data)
- Andreas Müller wrote:
>
> Before closing we should delete the redundant methods from DescriptiveDataSetService. ... - 01:06 PM task #8651 (Resolved): Unify description aggregation methods (distribution and structured descriptive data)
- We do now have a common base class and also the LongRunningTaskService used only 1 method (with config as parameter)....
- 01:48 PM bug #8631: ABCD import fails to put new taxa into the classification, create mediaspecimens, etc
- I made some changes myself. Looks fine on Linux. Please test on windows.
- 12:35 PM bug #8631: ABCD import fails to put new taxa into the classification, create mediaspecimens, etc
- @Patrick could you have another look, whether it looks better now. It is difficult to check for me because with windo...
- 01:47 PM Revision d36d2eb8 (taxeditor): ref #8631 Fixed layout + merged constructors
- 01:27 PM Revision c68519c0 (cdmlib): ref #8651 Remove aggregation methods(now in DescriptionAggregationBase)
- 01:03 PM feature request #8253: Authors for genus autonyms
- Katja Luther wrote:
> Creating a section Achnanthes sect. Achnanthes and adding an author also results in Achnanthes... - 01:01 PM task #8679 (Closed): Further unify description aggregation methods
- Common base classes already exist. Further work might be:
* ~~use the same calls for "aggregateWithinTaxon", "aggr... - 12:59 PM feature request #8470 (Closed): Handle username constraints in user and group editing
- Seems to work as expected
- 12:53 PM feature request #7019 (Closed): sort import menu
- Works as expected.
- 09:14 AM feature request #7019 (Resolved): sort import menu
- 12:27 PM task #8678 (New): Update Fauna Europaea Master Db for common names with area = North America and language = Dutch (Middle)
- Some common names had "English-United States" as language and where imported with language = English and Area = North...
- 12:22 PM Revision 67ab92f3 (cdm-dataportal): ref #8673 Adapt portal to CdmSource eager loading
- 11:32 AM Revision f4c1a988 (cdmlib): add default priority to distribution aggregation webservice
- 11:32 AM Revision d1292203 (cdmlib): ref #8651 always add description type to aggregated descriptions
- 11:32 AM Revision 7841cf62 (cdmlib): cleanup
- 11:17 AM Revision 453261d0 (cdmlib): ref #8673 Extend property path for CdmSources
- 11:15 AM Revision 1e2fd81a (cdmlib): ref #8673 make cdmSource Eager to avoid LIEs
- 10:42 AM Revision 065e965b (cdm-dataportal): ref #8673 Adapt portal to CdmSource for aggregation clones
- 10:30 AM Revision c32e83c4 (cdmlib): ref #8673 Extend property path for CdmSources
- 08:37 AM feature request #6337 (Rejected): simple web ui to trigger the transmission engine distribution
- I also agree
- 08:36 AM feature request #6337: simple web ui to trigger the transmission engine distribution
- Norbert wrote:
I agree that TaxEditor is the preferred place to run aggregation, see no need for an implementation... - 08:35 AM Revision 4eedd13b (taxeditor): ref #8651 Adapt to cdmlib aggregation configuration
11/12/2019
- 11:46 PM Revision 67146e56 (cdmlib): cleanup
- 11:46 PM Revision 58ea183c (cdmlib): ref #8651 smaller changes to distribution accumulation webservice
- 11:32 PM bug #8676: TaxonDaoHibernateImpl.countTaxaByName misses parameter authorship
- Shouldn't we rename the parameter to authorshipCache in the service layer methods. Because that is what it is.
- 09:05 PM bug #8676: TaxonDaoHibernateImpl.countTaxaByName misses parameter authorship
- no worries, it was fixed already when I created the ticket. I only had no time to commit and push.
- 09:03 PM bug #8676 (Resolved): TaxonDaoHibernateImpl.countTaxaByName misses parameter authorship
- Applied in changeset commit:cdmlib|83c72818d2e637f56f3e956c99cb0e6c1e508cbd.
- 06:10 PM bug #8676: TaxonDaoHibernateImpl.countTaxaByName misses parameter authorship
- Why is this in 5.11. Please fix immediately if you want to keep it here. Otherwise move.
- 05:37 PM bug #8676 (Closed): TaxonDaoHibernateImpl.countTaxaByName misses parameter authorship
- The find method corresponding to `countTaxaByName(Class <? extends TaxonBase> clazz, String uninomial, String infrag...
- 11:08 PM Revision 9d192006 (cdmlib): ref #8651 register UUID lists for distribution accumulation webservice
- 11:08 PM Revision 39c4cced (cdmlib): cleanup
- 09:03 PM Revision 83c72818 (cdmlib): fix #8676 adding authorship parameter to countTaxaByName
- 09:03 PM Revision f31f3e26 (cdmlib): updating jetty microversion in launcher
- 06:36 PM feature request #6337: simple web ui to trigger the transmission engine distribution
- Andreas (and maybe Norbert, Eckhard). Can you please decide if this is still needed at all. I guess if a TaxEditor UI...
- 06:28 PM feature request #6352: Add Transmission Engine trigger to Admin menu
- This is more or less a duplicate for #8677. There it is defined as called in "Set subtree" menu.
Probably we need di... - 06:16 PM task #8651 (In Progress): Unify description aggregation methods (distribution and structured descriptive data)
- This is basically done but there are mutliple open tasks
- 06:14 PM feature request #5176 (Resolved): TransmissionEngineDistribution can run on selected taxa
- This should be fixed.
- 06:13 PM bug #4134 (Resolved): Transmissionengine Distribution seems to miss distributions for higher Taxa
- I set to resolved as I guess it is fixed. But needs to be reviewed.
- 06:09 PM feature request #8470: Handle username constraints in user and group editing
- I guess this is for review
- 11:37 AM feature request #8470: Handle username constraints in user and group editing
- Andreas Müller wrote:
> Also in the "New" dialog there is a message "Input cannot be empty". Also here further infor... - 11:36 AM feature request #8470 (Resolved): Handle username constraints in user and group editing
- Andreas Müller wrote:
> Can you please leave a message how exactly you changed the issue discussed in note 7 and 8. ... - 10:53 AM feature request #8470: Handle username constraints in user and group editing
- Also in the "New" dialog there is a message "Input cannot be empty". Also here further information on the allowed cha...
- 10:52 AM feature request #8470: Handle username constraints in user and group editing
- Can you please leave a message how exactly you changed the issue discussed in note 7 and 8. The discussion was not en...
- 10:49 AM feature request #8470: Handle username constraints in user and group editing
- Andreas Müller wrote:
> Now when creating a new user the bulkeditor is dirty. When NOT saving the bulk editor and af... - 10:47 AM feature request #8470 (Feedback): Handle username constraints in user and group editing
- Now when creating a new user the bulkeditor is dirty. When NOT saving the bulk editor and after reopening the bulk ed...
- 06:08 PM feature request #8677 (Closed): Add distribution aggregation to set subtree menu
- There is a new long running task "DisributionAggregation" which runs on a TaxonNodeFilter (#8651 and others). It shou...
- 04:48 PM Revision c655943d (cdmlib): ref #8651 factory method and base constructor for aggregation configurators
- 03:22 PM EDIT Platform Etablierung task #8578: Discuss and find appropriate terms for major editor parts (window, view, editor, panel, pane)
- Die Umfrage ist abgeschlossen und ausgewertet (attachment:Taxeditor-Terms-Poll-2019.pdf):
-----
Hallo zusammen,
... - 03:21 PM Revision a51edae3 (cdmlib): ref #8651 unify invocation call in LongRunninTasksService
- 03:00 PM Revision 140a83b3 (taxeditor): ref #8470: change null to empty in message
- 02:54 PM Revision 768595a5 (taxeditor): ref #8350: avoid IllegalArgumentException
- 02:51 PM Revision e116bd58 (taxeditor): fix NPE in StoreUtil
- 02:37 PM Revision a2dd1526 (cdmlib): ref #8651 use explicit conifguration for structured descriptions
- 02:27 PM Revision 68c9d8e4 (taxeditor): Rename menu entry for DDS navigator
- 01:45 PM Revision 99a9422e (taxeditor): ref #8667: minor
- 01:35 PM Revision a02567b7 (taxeditor): layout issues for create taxonnode wizard
- 01:35 PM Revision 95622e27 (taxeditor): ref #8470: user/group creation string localization
- 01:35 PM Revision df2a4c41 (taxeditor): ref #8667: l10n for orcid element
- 01:35 PM Revision 755b2883 (taxeditor): ref #8667: smaller layout issues for orcids
- 01:35 PM Revision 905fdec1 (taxeditor): ref #8631: same layout for unit id and nomenclatural code combobox
- 01:35 PM Revision 5dd36b69 (taxeditor): ref #8470: user/group creation continue
- 01:03 PM Revision 7f601c27 (taxeditor): ref #8651 Use unified aggregation class for matrix aggregation
- 01:02 PM Revision 5f993e31 (taxeditor): ref #7019 Fix menu sort order of navigation context menu
- 12:04 PM bug #8675: Make Ranks sortable by natural order
- Best place might be the Names-Ranks preference page
- 12:03 PM bug #8675 (New): Make Ranks sortable by natural order
- This was already available in past but seems being lost in current version.
- 11:42 AM bug #8628 (Closed): Add ORCID as person identifier
- this message is easier to understand how the identifier should look like
- 09:40 AM bug #8628 (Resolved): Add ORCID as person identifier
- I adapted the error messages a bit. Can you please review again?
- 11:40 AM bug #8664 (Closed): SQLGrammarException when opening Specimen selection
- I tested again and it seems to work now.
- 11:34 AM feature request #8253 (Resolved): Authors for genus autonyms
- By the way the parser for me now also works with names like "Achnanthes Bory sect. Achnanthes". So can you please che...
- 11:30 AM feature request #8253: Authors for genus autonyms
- Katja Luther wrote:
> Creating a section Achnanthes sect. Achnanthes and adding an author also results in Achnanthes... - 11:19 AM Revision 46278434 (cdmlib): ref #8651, #8467 Use unified aggregation class for matrix aggregation
- - Link specimen descriptions as sources as direct CDM entities
- 11:19 AM Revision 5394c18a (cdmlib): Fix potential class cast exception
- 10:56 AM Revision 6d1c29e8 (taxeditor): ref #8470: user/group editor should not be dirty after creating new entity
- 10:38 AM feature request #7019: sort import menu
- Kannst du dann noch umbenennen: ABCD => ABCD file; Excel Normal Explicit Taxa => Exel Normal Explicit; RIS Referenze...
- 10:37 AM feature request #7019: sort import menu
- Andreas Müller wrote:
> It seems to depend on experimental being switcht on or not. In later case the old menu appea... - 10:24 AM feature request #7019: sort import menu
- It seems to depend on experimental being switcht on or not. In later case the old menu appears.
- 10:02 AM feature request #7019: sort import menu
- I still get the old menu no matter what I do. I deleted the .metadata folder, I downloaded a completely new TaxEditor...
- 09:39 AM Revision e82373d1 (cdmlib): ref #8628 Improve error messages for ORCID parsing
- 09:26 AM Revision 00fafe2a (cdmlib): ref #8651 remove MarkerType.Computed where possible
- 09:25 AM Revision c597851f (cdmlib): cleanup
- 08:34 AM Revision 291ea3f3 (cdmlib): ref #8651 fix failing tests due to order of aggregation
- 01:51 AM Revision 3a97a754 (cdmlib): ref #8651 remove some comments and handle AggregationMode correctly
- 01:40 AM Revision d062baaf (cdmlib): ref #8651 fix failing tests due to use of old description markers
- 01:39 AM Revision 7c03912b (cdmlib): ref #8651 merge area and rank aggregation for DistributionAggregation
- 12:46 AM Revision 406d4d96 (cdmlib): fix max rank in DwcaExportController
- 12:45 AM Revision 3b1c92ca (cdmlib): ref #5176 add all taxon node filter attributes to distribution aggregation webservice
- 12:44 AM Revision 5c148b4e (cdmlib): ref #8651 more specific description type for DistributionAggregation
11/11/2019
- 11:48 PM Revision 3807d9cb (cdmlib): cleanup
- 11:46 PM Revision 6be3adaa (cdmlib): ref #5176, ref #8651 make DistributionAggregation treeIndex based and use TaxonNodeFilter
- 11:38 PM feature request #4366: Transmissionengine Distribution: implement rules for source references
- From AG:
The original BM Transmission Engine was handled references ONLY for the Med_Check_List 2 use cases. For E... - 11:38 PM task #8674: configure cdm-server docker image to run with jemalloc
- the new docker image is now based on ubuntu:bionic since jemalloc in alpine Linux fails with segfault.
Therefore I ... - 11:33 PM task #8674 (Resolved): configure cdm-server docker image to run with jemalloc
- Applied in changeset commit:cdm-server|a9e82e311a06d536699eefabdf13b89fbb8e6220.
- 02:41 PM task #8674 (Closed): configure cdm-server docker image to run with jemalloc
- 11:33 PM Revision a9e82e31 (cdm-server): fix #8674 docker image based on ubuntu:bionic with openjdk8 and jemalloc
- 11:31 PM Revision 3fe716be (cdm-server): gitignore
- 02:04 PM feature request #8667: Make Person.orcid editable in TaxEditor
- Please add space after "ORCID won't be saved!" , before the real error message.
- 02:01 PM feature request #8667 (Feedback): Make Person.orcid editable in TaxEditor
- The error message does not always have enough space
 - 12:39 PM feature request #8667 (Resolved): Make Person.orcid editable in TaxEditor
- The field is added to the editor. please review.
- 01:58 PM feature request #8673: Allow OriginalSource to link to other CDM objects
- Can you please review?
Please also have in mind that webservices should not deliver the full cdmobject and maybe e... - 01:52 PM bug #8631 (Feedback): ABCD import fails to put new taxa into the classification, create mediaspecimens, etc
- So the layout still needs some update for linux, I guess.
- 11:08 AM bug #8631: ABCD import fails to put new taxa into the classification, create mediaspecimens, etc
- This is how it looks for me. Started the editor from the IDE.
 - 12:59 PM bug #5048: cdm-server causes unusual high native memory consumption for jvm
- configuring the test server to use `jemalloc` instead of `malloc?` drastically reduced the native memory overhead:
... - 12:50 PM bug #8628: Add ORCID as person identifier
- This is difficult because multiple formats are possible (with http, https, only orcid.org or completely missing all p...
- 11:06 AM bug #8628 (Feedback): Add ORCID as person identifier
- Could you add an example in the exception message to show how it should look like. And that an x at the end is possib...
- 12:37 PM feature request #8253 (Feedback): Authors for genus autonyms
- Creating a section Achnanthes sect. Achnanthes and adding an author also results in Achnanthes sect. Achnanthes Bory,...
- 12:32 PM feature request #8470: Handle username constraints in user and group editing
- please review
- 12:12 PM Revision c1217ecf (cdmlib): ref #8673 Fix NPE for OriginalSourceBase.getCdmSource
- 11:14 AM feature request #7019: sort import menu
- Tried this morning. Seems to work. Please download and try again.
- 11:02 AM Revision 39913f14 (taxeditor): Add constant for term search to default perspective
- 11:02 AM Revision 11761cac (taxeditor): Externalize fragment IDs
- 10:49 AM Revision a704339f (taxeditor): ref #8667: add orcid to person detail element - continue
- 10:18 AM Revision b2e5f9bf (taxeditor): ref #8667: add orcid to person detail element
- 09:47 AM bug #8530: Multiple Representation Exceptions when editing Textual Type Designations
- mail Inan Erdogan:
ich glaube das passiert bei mir fast ausschliesslich, wenn ich entweder im Hauptansichtsfeld de... - 09:37 AM bug #4134: Transmissionengine Distribution seems to miss distributions for higher Taxa
- AM:
Ja, ich habe dann später auch festgestellt, dass die Aggregation bis zum Tribus in dem Fall gewünscht war. Dah... - 09:28 AM bug #4134 (In Progress): Transmissionengine Distribution seems to miss distributions for higher Taxa
- NK:
Vor eine Neuaggregation können und sollten die Neuberechnungen auf Subtribus- und Tribus-Ebene gelöscht werden... - 09:37 AM Revision cb45e05b (taxeditor): ref #8631: layout issues in abcd import wizard page and refresh of navigator after abcd import
11/10/2019
- 12:30 PM Revision c8c05549 (cdmlib): cleanup
- 12:30 PM Revision 186cf7ed (cdmlib): ref #8673 add Cascade.Delete and orphanRemoval and handle getter/setter on target directly
11/09/2019
- 06:37 PM Revision 3aa37a25 (cdmlib): ref #8651 remove unnecessary dependency DistributionAggregation in DescriptionElementListController
- 06:14 PM Revision d68e1b58 (cdmlib): ref #8651 try to fix failing repository dependency injection in DescriptionListController (2nd try)
- 05:55 PM Revision ade857dd (cdm-vaadin): fix #8673 update Vaadin test DB to CdmLinkSource changes
- 05:54 PM Revision 5e7c747f (taxeditor): fix #8673 update TaxEditor test DB to CdmLinkSource changes
- 05:52 PM Revision 8049524f (cdmlib): ref #8651 try to fix failing repository dependency injection in DescriptionListController
- 05:51 PM Revision b45755b5 (cdmlib): cleanup
- 05:43 PM feature request #8673 (Resolved): Allow OriginalSource to link to other CDM objects
- Applied in changeset commit:cdmlib|93ad7e545dc77e63b68e434c62c8560a68bb9dfb.
- 12:33 PM feature request #8673 (Closed): Allow OriginalSource to link to other CDM objects
- Currently links are only available to Reference and (external) URIs. However, especially for adding sources to aggreg...
- 05:41 PM Revision 93ad7e54 (cdmlib): fix #8673 Add CdmLinkSource to OriginalSourceBase
- 01:14 PM Revision 8bbb7d89 (cdmlib): ref #8651 try to fix compile error in DescriptionListController
- 12:42 PM Revision a7e34ddd (cdmlib): cleanup
- 12:41 PM Revision 3bab771f (cdmlib): ref #8651 remove @Service annotation from DistributionAggregation and moving some functionality to base class + explicit Configurator for DistributionAggregation
- 12:23 PM feature request #4366 (Feedback): Transmissionengine Distribution: implement rules for source references
- As this ticket is E+M specific, discusses only specific cases and neglects also to mention discussion from #2625 (att...
- 11:40 AM feature request #4366: Transmissionengine Distribution: implement rules for source references
- Andreas Kohlbecker wrote:
> Replying to [[comment1|a.kohlbecker]]:
>
> > Hallo Andreas,
>
> >
>
> > dem l... - 12:17 PM task #8672 (In Progress): Source handling during (distribution) aggregation
- There are different possibilities to handle sources during aggregation of factual (distribution and structured descri...
- 11:24 AM bug #8670: Unwanted distribution aggregation/display on 2 levels
- > NK:
> Frage: wenn in allen Fällen auf Level 3 aggregiert werden muss (**ist das so?**), lässt sich dann nicht weni... - 12:29 AM bug #8670: Unwanted distribution aggregation/display on 2 levels
- It needs to be decided if this is an aggregation issue or a display (output) issue.
- 12:29 AM bug #8670 (Closed): Unwanted distribution aggregation/display on 2 levels
- NK:
Der Schritt der Aggregation auf der Ebene des primären Taxons von level 3 auf level 4 führt:
(a) zu einer un... - 10:54 AM task #8671: Distribution in E+M (BM) on different levels
- SQL to find such cases in E+M BM:
~~~
SELECT occ.SummaryStatus, n.FullNameCache, pt.PTRefFk, n.NameCache
FROM em... - 10:08 AM task #8671: Distribution in E+M (BM) on different levels
- Eine Lösung für dieses Problem könnte sein, dass man nicht (wie in #8670) die Areale aufwärts aggregiert sondern abwä...
- 09:28 AM task #8671 (Rejected): Distribution in E+M (BM) on different levels
- We may need to solve the below problem in Euro+Med (Berlin Model) with new functionality in CDM.
=====
AM:
I...
11/08/2019
- 11:43 PM bug #4134 (Feedback): Transmissionengine Distribution seems to miss distributions for higher Taxa
- Das ist für mich nicht logisch. Auch wenn die Aggregation über die Areale auch auf höheren Rangstufen erfolgte (was i...
- 10:12 PM bug #8669 (New): Permission problems when caches are updated without permission
- The problem is described in #8650 . There a person title had changed and therefore the team titlecache was updated du...
- 10:08 PM bug #8650: PermissionDenied Exception for Teams when editing distributions
- I remove from milestone as this is a pure data related fix.
We need a new ticket for handling the cache update pro... - 09:05 PM Revision ed09c048 (cdmlib): cleanup
- 09:05 PM Revision 535525fc (cdmlib): fix #8628 update cdm.map.ser to Person.orcid
- 08:58 PM feature request #8668 (New): Show Person.orcid in dataportal
- ... but for this we first need an Person or Agent page I guess. So this ticket is blocked.
See https://support.orc... - 08:56 PM feature request #8667 (Closed): Make Person.orcid editable in TaxEditor
- this should be done similar to DOI in Reference class
- 08:54 PM bug #8628: Add ORCID as person identifier
- This should be fixed now. Please review.
- 08:47 PM bug #8628 (Resolved): Add ORCID as person identifier
- Applied in changeset commit:cdmlib|6e1b0ff9bdf5c8e20f1df4e5542aa44554252a81.
- 08:51 PM Revision 9d0322b2 (cdm-vaadin): fix #8628 update Vaadin test DB to Person.orcid
- 08:50 PM Revision 58a6ce02 (taxeditor): fix #8628 update TaxEditor test DB to Person.orcid
- 08:47 PM Revision 4fb5b361 (cdmlib): cleanup
- 08:46 PM Revision 6e1b0ff9 (cdmlib): fix #8628 add ORCID as person identifier
- 08:43 PM Revision 6119597f (cdmlib): cleanup
- 04:52 PM bug #8666 (New): Login fails if classification can not be loaded
- If the sortindex of a root taxon is destroyed the classification can not be loaded.
Loading classification is curr... - 03:20 PM feature request #8665 (Closed): Rename "New" to "New Tree" in Term Tree editors
- in context menu
- 03:14 PM feature request #8253: Authors for genus autonyms
- Very strange, it seems to work with Achnanthes Bory subg. Achnanthes but not with Achnanthes Bory sect. Achnanthes. T...
- 02:16 PM feature request #8253: Authors for genus autonyms
- Hm, strange, it still doesn't seem to work. Though there is a test with the exact same string "" in NonViralNameParse...
- 01:26 PM feature request #8253: Authors for genus autonyms
- should be fixed now
- 01:24 PM feature request #8253 (Resolved): Authors for genus autonyms
- Applied in changeset commit:cdmlib|6ef5a0b16df87d2bd76e8e14cc714cd845f17366.
- 12:14 PM feature request #8253: Authors for genus autonyms
- OK, the problem is I used parseFullName in NonViralNameParserImplTest. But the editor use parseReferencedName I guess...
- 10:49 AM feature request #8253 (Feedback): Authors for genus autonyms
- when entering Achnanthes Bory sect. Achnanthes in NameEditor the rank and epithets are not parsed correctly.
The e... - 03:06 PM bug #8429: Rename DeterminationEvent_Reference.setOfReferences_id
- Andreas Müller wrote:
> Please review.
- 03:05 PM feature request #8441: Add FeatureState class
- Can you still remove? Did you try to remove things? So no orphan-removal issues?
- 03:04 PM feature request #8398 (Closed): Add nomenclatural code edition to ruleConsidered
- Andreas Kohlbecker wrote:
> excellently implemented, thanks a lot!
>
> I extended the protected constructors in `... - 02:44 PM feature request #7019 (Feedback): sort import menu
- I can't see any difference tried with update and install new version of current nightly.
 - 12:27 PM feature request #7019 (Resolved): sort import menu
- Applied in changeset commit:taxeditor|708b6366b5bba1a1669243d3f7145a1967258e04.
- 11:42 AM feature request #7019: sort import menu
- We decided to use "Specimen online"
- 11:07 AM feature request #7019: sort import menu
- Andreas Kohlbecker wrote:
> "Specimen (webservice)" still is not a very good label, alternatives are
>
> * "Speci... - 10:54 AM feature request #7019: sort import menu
- "Specimen (webservice)" still is not a very good label, alternatives are
* "Specimen (BioCase)"
* "Specimen (glob... - 10:47 AM feature request #7019: sort import menu
- For now we could simply use separators in the menu to separate specimen from taxa and those from references etc. But ...
- 10:44 AM feature request #7019: sort import menu
- Also we should rename "Import Specimen" to "Specimen (webservice)" and ABCD to "ABCD file" to give them a bit more se...
- 02:42 PM feature request #8470 (Resolved): Handle username constraints in user and group editing
- Applied in changeset commit:taxeditor|a0e1ca0573bdcbd929a27e347010da83a453c93c.
- 02:00 PM feature request #8470: Handle username constraints in user and group editing
- hmm, I think users and groups are special. There names are are unique identifiers and should not be changed anymore. ...
- 11:18 AM feature request #8470: Handle username constraints in user and group editing
- Another question:
at the moment the user is created and saved immediately, but the group is created and saved when... - 02:42 PM Revision a0e1ca05 (taxeditor): fix #8470: create user/group in creator
- 02:19 PM bug #8664: SQLGrammarException when opening Specimen selection
- I can't currently review as the accoding DB can't be connected to via TaxEditor at the moment. But code looks ok. I w...
- 10:28 AM bug #8664 (Resolved): SQLGrammarException when opening Specimen selection
- 01:24 PM Revision 5f582094 (cdmlib): cleanup
- 01:24 PM Revision 6ef5a0b1 (cdmlib): fix #8253 fix problem with infrageneric autonyms full reference parsing
- 01:23 PM Revision dfd3521b (taxeditor): ref #8470: check name by regex before creating
- 12:32 PM Revision e4101b39 (taxeditor): fix #7019 fix menu string
- 12:27 PM Revision 708b6366 (taxeditor): fix #7019 sort import menu
- 11:00 AM bug #8631: ABCD import fails to put new taxa into the classification, create mediaspecimens, etc
- Andreas Müller wrote:
> Can you please leave a note if this is easy to fix? Otherwise please move to new ticket as t... - 10:57 AM bug #8631: ABCD import fails to put new taxa into the classification, create mediaspecimens, etc
- Can you please leave a note if this is easy to fix? Otherwise please move to new ticket as the layout is not really p...
- 10:42 AM Revision 9021b90c (taxeditor): ref #8410: fix NPE
- 10:35 AM feature request #8410 (Closed): Add nomenclatural code edition to ruleConsidered in TaxEditor
- It looks better now. I think we can close the ticket.
- 10:26 AM Revision fab3ab30 (taxeditor): ref #8450 Show data set navigator menu in taxon navigator menu section
- 10:25 AM Revision 46a006fa (cdmlib): ref #8450 Fix SQLGrammarException when no taxa could be found
- 10:20 AM Revision 6448502c (taxeditor): Merge branch 'develop' of ssh://dev.e-taxonomy.eu/var/git/taxeditor into develop
- 10:19 AM Revision 739dc887 (taxeditor): ref #8470: exception handling also for groups
- 10:04 AM Revision 7bbfb091 (taxeditor): ref #8410: indent only for label -continue
- 09:50 AM Revision c127b2b6 (taxeditor): ref #8410: indent only for label
- 09:42 AM bug #8632 (Closed): ABCD retrieves DNA Sample from Biocase Provider even if it is not selected in the import configuration
- 09:14 AM feature request #8613 (Closed): For distribution editor default reference should be used also when new source is created
- Seems to work now
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