Activity
From 10/14/2019 to 11/12/2019
11/12/2019
- 11:46 PM Revision 67146e56 (cdmlib): cleanup
- 11:46 PM Revision 58ea183c (cdmlib): ref #8651 smaller changes to distribution accumulation webservice
- 11:32 PM bug #8676: TaxonDaoHibernateImpl.countTaxaByName misses parameter authorship
- Shouldn't we rename the parameter to authorshipCache in the service layer methods. Because that is what it is.
- 09:05 PM bug #8676: TaxonDaoHibernateImpl.countTaxaByName misses parameter authorship
- no worries, it was fixed already when I created the ticket. I only had no time to commit and push.
- 09:03 PM bug #8676 (Resolved): TaxonDaoHibernateImpl.countTaxaByName misses parameter authorship
- Applied in changeset commit:cdmlib|83c72818d2e637f56f3e956c99cb0e6c1e508cbd.
- 06:10 PM bug #8676: TaxonDaoHibernateImpl.countTaxaByName misses parameter authorship
- Why is this in 5.11. Please fix immediately if you want to keep it here. Otherwise move.
- 05:37 PM bug #8676 (Closed): TaxonDaoHibernateImpl.countTaxaByName misses parameter authorship
- The find method corresponding to `countTaxaByName(Class <? extends TaxonBase> clazz, String uninomial, String infrag...
- 11:08 PM Revision 9d192006 (cdmlib): ref #8651 register UUID lists for distribution accumulation webservice
- 11:08 PM Revision 39c4cced (cdmlib): cleanup
- 09:03 PM Revision 83c72818 (cdmlib): fix #8676 adding authorship parameter to countTaxaByName
- 09:03 PM Revision f31f3e26 (cdmlib): updating jetty microversion in launcher
- 06:36 PM feature request #6337: simple web ui to trigger the transmission engine distribution
- Andreas (and maybe Norbert, Eckhard). Can you please decide if this is still needed at all. I guess if a TaxEditor UI...
- 06:28 PM feature request #6352: Add Transmission Engine trigger to Admin menu
- This is more or less a duplicate for #8677. There it is defined as called in "Set subtree" menu.
Probably we need di... - 06:16 PM task #8651 (In Progress): Unify description aggregation methods (distribution and structured descriptive data)
- This is basically done but there are mutliple open tasks
- 06:14 PM feature request #5176 (Resolved): TransmissionEngineDistribution can run on selected taxa
- This should be fixed.
- 06:13 PM bug #4134 (Resolved): Transmissionengine Distribution seems to miss distributions for higher Taxa
- I set to resolved as I guess it is fixed. But needs to be reviewed.
- 06:09 PM feature request #8470: Handle username constraints in user and group editing
- I guess this is for review
- 11:37 AM feature request #8470: Handle username constraints in user and group editing
- Andreas Müller wrote:
> Also in the "New" dialog there is a message "Input cannot be empty". Also here further infor... - 11:36 AM feature request #8470 (Resolved): Handle username constraints in user and group editing
- Andreas Müller wrote:
> Can you please leave a message how exactly you changed the issue discussed in note 7 and 8. ... - 10:53 AM feature request #8470: Handle username constraints in user and group editing
- Also in the "New" dialog there is a message "Input cannot be empty". Also here further information on the allowed cha...
- 10:52 AM feature request #8470: Handle username constraints in user and group editing
- Can you please leave a message how exactly you changed the issue discussed in note 7 and 8. The discussion was not en...
- 10:49 AM feature request #8470: Handle username constraints in user and group editing
- Andreas Müller wrote:
> Now when creating a new user the bulkeditor is dirty. When NOT saving the bulk editor and af... - 10:47 AM feature request #8470 (Feedback): Handle username constraints in user and group editing
- Now when creating a new user the bulkeditor is dirty. When NOT saving the bulk editor and after reopening the bulk ed...
- 06:08 PM feature request #8677 (Closed): Add distribution aggregation to set subtree menu
- There is a new long running task "DisributionAggregation" which runs on a TaxonNodeFilter (#8651 and others). It shou...
- 04:48 PM Revision c655943d (cdmlib): ref #8651 factory method and base constructor for aggregation configurators
- 03:22 PM EDIT Platform Etablierung task #8578: Discuss and find appropriate terms for major editor parts (window, view, editor, panel, pane)
- Die Umfrage ist abgeschlossen und ausgewertet (attachment:Taxeditor-Terms-Poll-2019.pdf):
-----
Hallo zusammen,
... - 03:21 PM Revision a51edae3 (cdmlib): ref #8651 unify invocation call in LongRunninTasksService
- 03:00 PM Revision 140a83b3 (taxeditor): ref #8470: change null to empty in message
- 02:54 PM Revision 768595a5 (taxeditor): ref #8350: avoid IllegalArgumentException
- 02:51 PM Revision e116bd58 (taxeditor): fix NPE in StoreUtil
- 02:37 PM Revision a2dd1526 (cdmlib): ref #8651 use explicit conifguration for structured descriptions
- 02:27 PM Revision 68c9d8e4 (taxeditor): Rename menu entry for DDS navigator
- 01:45 PM Revision 99a9422e (taxeditor): ref #8667: minor
- 01:35 PM Revision a02567b7 (taxeditor): layout issues for create taxonnode wizard
- 01:35 PM Revision 95622e27 (taxeditor): ref #8470: user/group creation string localization
- 01:35 PM Revision df2a4c41 (taxeditor): ref #8667: l10n for orcid element
- 01:35 PM Revision 755b2883 (taxeditor): ref #8667: smaller layout issues for orcids
- 01:35 PM Revision 905fdec1 (taxeditor): ref #8631: same layout for unit id and nomenclatural code combobox
- 01:35 PM Revision 5dd36b69 (taxeditor): ref #8470: user/group creation continue
- 01:03 PM Revision 7f601c27 (taxeditor): ref #8651 Use unified aggregation class for matrix aggregation
- 01:02 PM Revision 5f993e31 (taxeditor): ref #7019 Fix menu sort order of navigation context menu
- 12:04 PM bug #8675: Make Ranks sortable by natural order
- Best place might be the Names-Ranks preference page
- 12:03 PM bug #8675 (New): Make Ranks sortable by natural order
- This was already available in past but seems being lost in current version.
- 11:42 AM bug #8628 (Closed): Add ORCID as person identifier
- this message is easier to understand how the identifier should look like
- 09:40 AM bug #8628 (Resolved): Add ORCID as person identifier
- I adapted the error messages a bit. Can you please review again?
- 11:40 AM bug #8664 (Closed): SQLGrammarException when opening Specimen selection
- I tested again and it seems to work now.
- 11:34 AM feature request #8253 (Resolved): Authors for genus autonyms
- By the way the parser for me now also works with names like "Achnanthes Bory sect. Achnanthes". So can you please che...
- 11:30 AM feature request #8253: Authors for genus autonyms
- Katja Luther wrote:
> Creating a section Achnanthes sect. Achnanthes and adding an author also results in Achnanthes... - 11:19 AM Revision 46278434 (cdmlib): ref #8651, #8467 Use unified aggregation class for matrix aggregation
- - Link specimen descriptions as sources as direct CDM entities
- 11:19 AM Revision 5394c18a (cdmlib): Fix potential class cast exception
- 10:56 AM Revision 6d1c29e8 (taxeditor): ref #8470: user/group editor should not be dirty after creating new entity
- 10:38 AM feature request #7019: sort import menu
- Kannst du dann noch umbenennen: ABCD => ABCD file; Excel Normal Explicit Taxa => Exel Normal Explicit; RIS Referenze...
- 10:37 AM feature request #7019: sort import menu
- Andreas Müller wrote:
> It seems to depend on experimental being switcht on or not. In later case the old menu appea... - 10:24 AM feature request #7019: sort import menu
- It seems to depend on experimental being switcht on or not. In later case the old menu appears.
- 10:02 AM feature request #7019: sort import menu
- I still get the old menu no matter what I do. I deleted the .metadata folder, I downloaded a completely new TaxEditor...
- 09:39 AM Revision e82373d1 (cdmlib): ref #8628 Improve error messages for ORCID parsing
- 09:26 AM Revision 00fafe2a (cdmlib): ref #8651 remove MarkerType.Computed where possible
- 09:25 AM Revision c597851f (cdmlib): cleanup
- 08:34 AM Revision 291ea3f3 (cdmlib): ref #8651 fix failing tests due to order of aggregation
- 01:51 AM Revision 3a97a754 (cdmlib): ref #8651 remove some comments and handle AggregationMode correctly
- 01:40 AM Revision d062baaf (cdmlib): ref #8651 fix failing tests due to use of old description markers
- 01:39 AM Revision 7c03912b (cdmlib): ref #8651 merge area and rank aggregation for DistributionAggregation
- 12:46 AM Revision 406d4d96 (cdmlib): fix max rank in DwcaExportController
- 12:45 AM Revision 3b1c92ca (cdmlib): ref #5176 add all taxon node filter attributes to distribution aggregation webservice
- 12:44 AM Revision 5c148b4e (cdmlib): ref #8651 more specific description type for DistributionAggregation
11/11/2019
- 11:48 PM Revision 3807d9cb (cdmlib): cleanup
- 11:46 PM Revision 6be3adaa (cdmlib): ref #5176, ref #8651 make DistributionAggregation treeIndex based and use TaxonNodeFilter
- 11:38 PM feature request #4366: Transmissionengine Distribution: implement rules for source references
- From AG:
The original BM Transmission Engine was handled references ONLY for the Med_Check_List 2 use cases. For E... - 11:38 PM task #8674: configure cdm-server docker image to run with jemalloc
- the new docker image is now based on ubuntu:bionic since jemalloc in alpine Linux fails with segfault.
Therefore I ... - 11:33 PM task #8674 (Resolved): configure cdm-server docker image to run with jemalloc
- Applied in changeset commit:cdm-server|a9e82e311a06d536699eefabdf13b89fbb8e6220.
- 02:41 PM task #8674 (Closed): configure cdm-server docker image to run with jemalloc
- 11:33 PM Revision a9e82e31 (cdm-server): fix #8674 docker image based on ubuntu:bionic with openjdk8 and jemalloc
- 11:31 PM Revision 3fe716be (cdm-server): gitignore
- 02:04 PM feature request #8667: Make Person.orcid editable in TaxEditor
- Please add space after "ORCID won't be saved!" , before the real error message.
- 02:01 PM feature request #8667 (Feedback): Make Person.orcid editable in TaxEditor
- The error message does not always have enough space
 - 12:39 PM feature request #8667 (Resolved): Make Person.orcid editable in TaxEditor
- The field is added to the editor. please review.
- 01:58 PM feature request #8673: Allow OriginalSource to link to other CDM objects
- Can you please review?
Please also have in mind that webservices should not deliver the full cdmobject and maybe e... - 01:52 PM bug #8631 (Feedback): ABCD import fails to put new taxa into the classification, create mediaspecimens, etc
- So the layout still needs some update for linux, I guess.
- 11:08 AM bug #8631: ABCD import fails to put new taxa into the classification, create mediaspecimens, etc
- This is how it looks for me. Started the editor from the IDE.
 - 12:59 PM bug #5048: cdm-server causes unusual high native memory consumption for jvm
- configuring the test server to use `jemalloc` instead of `malloc?` drastically reduced the native memory overhead:
... - 12:50 PM bug #8628: Add ORCID as person identifier
- This is difficult because multiple formats are possible (with http, https, only orcid.org or completely missing all p...
- 11:06 AM bug #8628 (Feedback): Add ORCID as person identifier
- Could you add an example in the exception message to show how it should look like. And that an x at the end is possib...
- 12:37 PM feature request #8253 (Feedback): Authors for genus autonyms
- Creating a section Achnanthes sect. Achnanthes and adding an author also results in Achnanthes sect. Achnanthes Bory,...
- 12:32 PM feature request #8470: Handle username constraints in user and group editing
- please review
- 12:12 PM Revision c1217ecf (cdmlib): ref #8673 Fix NPE for OriginalSourceBase.getCdmSource
- 11:14 AM feature request #7019: sort import menu
- Tried this morning. Seems to work. Please download and try again.
- 11:02 AM Revision 39913f14 (taxeditor): Add constant for term search to default perspective
- 11:02 AM Revision 11761cac (taxeditor): Externalize fragment IDs
- 10:49 AM Revision a704339f (taxeditor): ref #8667: add orcid to person detail element - continue
- 10:18 AM Revision b2e5f9bf (taxeditor): ref #8667: add orcid to person detail element
- 09:47 AM bug #8530: Multiple Representation Exceptions when editing Textual Type Designations
- mail Inan Erdogan:
ich glaube das passiert bei mir fast ausschliesslich, wenn ich entweder im Hauptansichtsfeld de... - 09:37 AM bug #4134: Transmissionengine Distribution seems to miss distributions for higher Taxa
- AM:
Ja, ich habe dann später auch festgestellt, dass die Aggregation bis zum Tribus in dem Fall gewünscht war. Dah... - 09:28 AM bug #4134 (In Progress): Transmissionengine Distribution seems to miss distributions for higher Taxa
- NK:
Vor eine Neuaggregation können und sollten die Neuberechnungen auf Subtribus- und Tribus-Ebene gelöscht werden... - 09:37 AM Revision cb45e05b (taxeditor): ref #8631: layout issues in abcd import wizard page and refresh of navigator after abcd import
11/10/2019
- 12:30 PM Revision c8c05549 (cdmlib): cleanup
- 12:30 PM Revision 186cf7ed (cdmlib): ref #8673 add Cascade.Delete and orphanRemoval and handle getter/setter on target directly
11/09/2019
- 06:37 PM Revision 3aa37a25 (cdmlib): ref #8651 remove unnecessary dependency DistributionAggregation in DescriptionElementListController
- 06:14 PM Revision d68e1b58 (cdmlib): ref #8651 try to fix failing repository dependency injection in DescriptionListController (2nd try)
- 05:55 PM Revision ade857dd (cdm-vaadin): fix #8673 update Vaadin test DB to CdmLinkSource changes
- 05:54 PM Revision 5e7c747f (taxeditor): fix #8673 update TaxEditor test DB to CdmLinkSource changes
- 05:52 PM Revision 8049524f (cdmlib): ref #8651 try to fix failing repository dependency injection in DescriptionListController
- 05:51 PM Revision b45755b5 (cdmlib): cleanup
- 05:43 PM feature request #8673 (Resolved): Allow OriginalSource to link to other CDM objects
- Applied in changeset commit:cdmlib|93ad7e545dc77e63b68e434c62c8560a68bb9dfb.
- 12:33 PM feature request #8673 (Closed): Allow OriginalSource to link to other CDM objects
- Currently links are only available to Reference and (external) URIs. However, especially for adding sources to aggreg...
- 05:41 PM Revision 93ad7e54 (cdmlib): fix #8673 Add CdmLinkSource to OriginalSourceBase
- 01:14 PM Revision 8bbb7d89 (cdmlib): ref #8651 try to fix compile error in DescriptionListController
- 12:42 PM Revision a7e34ddd (cdmlib): cleanup
- 12:41 PM Revision 3bab771f (cdmlib): ref #8651 remove @Service annotation from DistributionAggregation and moving some functionality to base class + explicit Configurator for DistributionAggregation
- 12:23 PM feature request #4366 (Feedback): Transmissionengine Distribution: implement rules for source references
- As this ticket is E+M specific, discusses only specific cases and neglects also to mention discussion from #2625 (att...
- 11:40 AM feature request #4366: Transmissionengine Distribution: implement rules for source references
- Andreas Kohlbecker wrote:
> Replying to [[comment1|a.kohlbecker]]:
>
> > Hallo Andreas,
>
> >
>
> > dem l... - 12:17 PM task #8672 (In Progress): Source handling during (distribution) aggregation
- There are different possibilities to handle sources during aggregation of factual (distribution and structured descri...
- 11:24 AM bug #8670: Unwanted distribution aggregation/display on 2 levels
- > NK:
> Frage: wenn in allen Fällen auf Level 3 aggregiert werden muss (**ist das so?**), lässt sich dann nicht weni... - 12:29 AM bug #8670: Unwanted distribution aggregation/display on 2 levels
- It needs to be decided if this is an aggregation issue or a display (output) issue.
- 12:29 AM bug #8670 (Closed): Unwanted distribution aggregation/display on 2 levels
- NK:
Der Schritt der Aggregation auf der Ebene des primären Taxons von level 3 auf level 4 führt:
(a) zu einer un... - 10:54 AM task #8671: Distribution in E+M (BM) on different levels
- SQL to find such cases in E+M BM:
~~~
SELECT occ.SummaryStatus, n.FullNameCache, pt.PTRefFk, n.NameCache
FROM em... - 10:08 AM task #8671: Distribution in E+M (BM) on different levels
- Eine Lösung für dieses Problem könnte sein, dass man nicht (wie in #8670) die Areale aufwärts aggregiert sondern abwä...
- 09:28 AM task #8671 (Rejected): Distribution in E+M (BM) on different levels
- We may need to solve the below problem in Euro+Med (Berlin Model) with new functionality in CDM.
=====
AM:
I...
11/08/2019
- 11:43 PM bug #4134 (Feedback): Transmissionengine Distribution seems to miss distributions for higher Taxa
- Das ist für mich nicht logisch. Auch wenn die Aggregation über die Areale auch auf höheren Rangstufen erfolgte (was i...
- 10:12 PM bug #8669 (New): Permission problems when caches are updated without permission
- The problem is described in #8650 . There a person title had changed and therefore the team titlecache was updated du...
- 10:08 PM bug #8650: PermissionDenied Exception for Teams when editing distributions
- I remove from milestone as this is a pure data related fix.
We need a new ticket for handling the cache update pro... - 09:05 PM Revision ed09c048 (cdmlib): cleanup
- 09:05 PM Revision 535525fc (cdmlib): fix #8628 update cdm.map.ser to Person.orcid
- 08:58 PM feature request #8668 (New): Show Person.orcid in dataportal
- ... but for this we first need an Person or Agent page I guess. So this ticket is blocked.
See https://support.orc... - 08:56 PM feature request #8667 (Closed): Make Person.orcid editable in TaxEditor
- this should be done similar to DOI in Reference class
- 08:54 PM bug #8628: Add ORCID as person identifier
- This should be fixed now. Please review.
- 08:47 PM bug #8628 (Resolved): Add ORCID as person identifier
- Applied in changeset commit:cdmlib|6e1b0ff9bdf5c8e20f1df4e5542aa44554252a81.
- 08:51 PM Revision 9d0322b2 (cdm-vaadin): fix #8628 update Vaadin test DB to Person.orcid
- 08:50 PM Revision 58a6ce02 (taxeditor): fix #8628 update TaxEditor test DB to Person.orcid
- 08:47 PM Revision 4fb5b361 (cdmlib): cleanup
- 08:46 PM Revision 6e1b0ff9 (cdmlib): fix #8628 add ORCID as person identifier
- 08:43 PM Revision 6119597f (cdmlib): cleanup
- 04:52 PM bug #8666 (New): Login fails if classification can not be loaded
- If the sortindex of a root taxon is destroyed the classification can not be loaded.
Loading classification is curr... - 03:20 PM feature request #8665 (Closed): Rename "New" to "New Tree" in Term Tree editors
- in context menu
- 03:14 PM feature request #8253: Authors for genus autonyms
- Very strange, it seems to work with Achnanthes Bory subg. Achnanthes but not with Achnanthes Bory sect. Achnanthes. T...
- 02:16 PM feature request #8253: Authors for genus autonyms
- Hm, strange, it still doesn't seem to work. Though there is a test with the exact same string "" in NonViralNameParse...
- 01:26 PM feature request #8253: Authors for genus autonyms
- should be fixed now
- 01:24 PM feature request #8253 (Resolved): Authors for genus autonyms
- Applied in changeset commit:cdmlib|6ef5a0b16df87d2bd76e8e14cc714cd845f17366.
- 12:14 PM feature request #8253: Authors for genus autonyms
- OK, the problem is I used parseFullName in NonViralNameParserImplTest. But the editor use parseReferencedName I guess...
- 10:49 AM feature request #8253 (Feedback): Authors for genus autonyms
- when entering Achnanthes Bory sect. Achnanthes in NameEditor the rank and epithets are not parsed correctly.
The e... - 03:06 PM bug #8429: Rename DeterminationEvent_Reference.setOfReferences_id
- Andreas Müller wrote:
> Please review.
- 03:05 PM feature request #8441: Add FeatureState class
- Can you still remove? Did you try to remove things? So no orphan-removal issues?
- 03:04 PM feature request #8398 (Closed): Add nomenclatural code edition to ruleConsidered
- Andreas Kohlbecker wrote:
> excellently implemented, thanks a lot!
>
> I extended the protected constructors in `... - 02:44 PM feature request #7019 (Feedback): sort import menu
- I can't see any difference tried with update and install new version of current nightly.
 - 12:27 PM feature request #7019 (Resolved): sort import menu
- Applied in changeset commit:taxeditor|708b6366b5bba1a1669243d3f7145a1967258e04.
- 11:42 AM feature request #7019: sort import menu
- We decided to use "Specimen online"
- 11:07 AM feature request #7019: sort import menu
- Andreas Kohlbecker wrote:
> "Specimen (webservice)" still is not a very good label, alternatives are
>
> * "Speci... - 10:54 AM feature request #7019: sort import menu
- "Specimen (webservice)" still is not a very good label, alternatives are
* "Specimen (BioCase)"
* "Specimen (glob... - 10:47 AM feature request #7019: sort import menu
- For now we could simply use separators in the menu to separate specimen from taxa and those from references etc. But ...
- 10:44 AM feature request #7019: sort import menu
- Also we should rename "Import Specimen" to "Specimen (webservice)" and ABCD to "ABCD file" to give them a bit more se...
- 02:42 PM feature request #8470 (Resolved): Handle username constraints in user and group editing
- Applied in changeset commit:taxeditor|a0e1ca0573bdcbd929a27e347010da83a453c93c.
- 02:00 PM feature request #8470: Handle username constraints in user and group editing
- hmm, I think users and groups are special. There names are are unique identifiers and should not be changed anymore. ...
- 11:18 AM feature request #8470: Handle username constraints in user and group editing
- Another question:
at the moment the user is created and saved immediately, but the group is created and saved when... - 02:42 PM Revision a0e1ca05 (taxeditor): fix #8470: create user/group in creator
- 02:19 PM bug #8664: SQLGrammarException when opening Specimen selection
- I can't currently review as the accoding DB can't be connected to via TaxEditor at the moment. But code looks ok. I w...
- 10:28 AM bug #8664 (Resolved): SQLGrammarException when opening Specimen selection
- 01:24 PM Revision 5f582094 (cdmlib): cleanup
- 01:24 PM Revision 6ef5a0b1 (cdmlib): fix #8253 fix problem with infrageneric autonyms full reference parsing
- 01:23 PM Revision dfd3521b (taxeditor): ref #8470: check name by regex before creating
- 12:32 PM Revision e4101b39 (taxeditor): fix #7019 fix menu string
- 12:27 PM Revision 708b6366 (taxeditor): fix #7019 sort import menu
- 11:00 AM bug #8631: ABCD import fails to put new taxa into the classification, create mediaspecimens, etc
- Andreas Müller wrote:
> Can you please leave a note if this is easy to fix? Otherwise please move to new ticket as t... - 10:57 AM bug #8631: ABCD import fails to put new taxa into the classification, create mediaspecimens, etc
- Can you please leave a note if this is easy to fix? Otherwise please move to new ticket as the layout is not really p...
- 10:42 AM Revision 9021b90c (taxeditor): ref #8410: fix NPE
- 10:35 AM feature request #8410 (Closed): Add nomenclatural code edition to ruleConsidered in TaxEditor
- It looks better now. I think we can close the ticket.
- 10:26 AM Revision fab3ab30 (taxeditor): ref #8450 Show data set navigator menu in taxon navigator menu section
- 10:25 AM Revision 46a006fa (cdmlib): ref #8450 Fix SQLGrammarException when no taxa could be found
- 10:20 AM Revision 6448502c (taxeditor): Merge branch 'develop' of ssh://dev.e-taxonomy.eu/var/git/taxeditor into develop
- 10:19 AM Revision 739dc887 (taxeditor): ref #8470: exception handling also for groups
- 10:04 AM Revision 7bbfb091 (taxeditor): ref #8410: indent only for label -continue
- 09:50 AM Revision c127b2b6 (taxeditor): ref #8410: indent only for label
- 09:42 AM bug #8632 (Closed): ABCD retrieves DNA Sample from Biocase Provider even if it is not selected in the import configuration
- 09:14 AM feature request #8613 (Closed): For distribution editor default reference should be used also when new source is created
- Seems to work now
11/07/2019
- 10:19 PM bug #8664: SQLGrammarException when opening Specimen selection
- I guess an empty list was the reason here. Isn't this fixed yet? If not I guess it is very easy to fix and we should ...
- 03:56 PM bug #8664 (Closed): SQLGrammarException when opening Specimen selection
… for „Test WorkingSet“ in MatrixEditor
~~~
login : admin
editor version : 5.11.0.201911041248
serve...- 05:12 PM feature request #8613 (Resolved): For distribution editor default reference should be used also when new source is created
- Katja Luther wrote:
> Andreas Müller wrote:
> > It still does not work if a source existed already before opening t... - 05:00 PM feature request #8613 (In Progress): For distribution editor default reference should be used also when new source is created
- Andreas Müller wrote:
> It still does not work if a source existed already before opening the DistrEditor for the gi... - 03:43 PM feature request #8613 (Feedback): For distribution editor default reference should be used also when new source is created
- It still does not work if a source existed already before opening the DistrEditor for the given record. Please test i...
- 09:10 AM feature request #8613 (Resolved): For distribution editor default reference should be used also when new source is created
- Andreas Müller wrote:
> Does not work for me yet. The reference field is still empty if I selected a base source and... - 05:11 PM Revision ca9d00b6 (taxeditor): ref #8613: send event to update details view when set default source
- 03:55 PM bug #8663 (Duplicate): LIE when trying to save a tree node
I tried to edit “Character Tree Test”-“second test structure third property” node in Character node editor.
Befo...- 03:53 PM bug #8662 (Closed): "Remove Taxon" in DescriptiveDataSetEditor should only be visible if taxon is selected
- … im Taxon filter als Kontextmenü. Auch wenn noch gar kein Taxon dort angezeigt wird.
Auch wenn Taxa existier... - 03:52 PM feature request #8661 (Closed): "New DataSet" should ask for label and then open the dataset
- … im Descriptive Data Set Navigator sollte den Descriptive Data Set Editor öffnen, damit das Dataset oder zumindest s...
- 03:51 PM feature request #8642 (Closed): Add tree editor for rank, NamedArea and PresenceAbsence
- Generic term tree menu creation moved to new ticket #8660. Also handling of not allowed duplicates #8655.
Close th... - 10:24 AM feature request #8642 (Resolved): Add tree editor for rank, NamedArea and PresenceAbsence
- Order is fixed.
Create new ticket for remaining issues -> #8655 - 03:50 PM bug #8660 (Duplicate): Generic menu creation for Term trees
- Currently the term tree menu is hardcoded. It should be implemented generically as the term (vocabulary) menu.
Thi... - 03:46 PM feature request #8648 (Closed): Simplify name details view configuration
- Works as expected now.
- 03:40 PM feature request #8470 (Feedback): Handle username constraints in user and group editing
- Please also implement for groups.
- 03:39 PM Revision 55236f7f (cdm-dataportal): ref #8596 harmonizing documentation
- 03:37 PM bug #8632: ABCD retrieves DNA Sample from Biocase Provider even if it is not selected in the import configuration
- I don't insist in keeping this function in the ABCD import. I only feared that we lose valuable functionality. theref...
- 03:27 PM bug #8632: ABCD retrieves DNA Sample from Biocase Provider even if it is not selected in the import configuration
- I suggest to close this ticket and if needed open a new ticket to discuss the necessity (and best implementation) of ...
- 03:09 PM bug #8632: ABCD retrieves DNA Sample from Biocase Provider even if it is not selected in the import configuration
- As mentioned by Katja before I do not understand why we need it. It is work to keep such things running and as Katjas...
- 01:51 PM bug #8632: ABCD retrieves DNA Sample from Biocase Provider even if it is not selected in the import configuration
- Katja Luther wrote:
...
> ... But when the problems solved we can reintegrate it to the file import. It is only... - 01:33 PM bug #8632: ABCD retrieves DNA Sample from Biocase Provider even if it is not selected in the import configuration
- Andreas Kohlbecker wrote:
> Katja Luther wrote:
> > Andreas Kohlbecker wrote:
> > > Patrick Plitzner wrote:
> > >... - 01:23 PM bug #8632: ABCD retrieves DNA Sample from Biocase Provider even if it is not selected in the import configuration
- Katja Luther wrote:
> Andreas Kohlbecker wrote:
> > Patrick Plitzner wrote:
> > > Andreas Kohlbecker wrote:
> > >... - 01:14 PM bug #8632: ABCD retrieves DNA Sample from Biocase Provider even if it is not selected in the import configuration
- Andreas Kohlbecker wrote:
> Patrick Plitzner wrote:
> > Andreas Kohlbecker wrote:
> > > Patrick Plitzner wrote:
>... - 01:05 PM bug #8632: ABCD retrieves DNA Sample from Biocase Provider even if it is not selected in the import configuration
- Patrick Plitzner wrote:
> Andreas Kohlbecker wrote:
> > Patrick Plitzner wrote:
> > > We used the specimen search ... - 12:39 PM bug #8632: ABCD retrieves DNA Sample from Biocase Provider even if it is not selected in the import configuration
- Andreas Kohlbecker wrote:
> Patrick Plitzner wrote:
> > We used the specimen search for DNA in the Taxeditor. This ... - 11:49 AM bug #8632: ABCD retrieves DNA Sample from Biocase Provider even if it is not selected in the import configuration
- Andreas Müller wrote:
> why did you give this to Lutz? I guess this was a mistake?
OOPS! Thank you for fixing this. - 11:47 AM bug #8632: ABCD retrieves DNA Sample from Biocase Provider even if it is not selected in the import configuration
- why did you give this to Lutz? I guess this was a mistake?
- 11:30 AM bug #8632 (Feedback): ABCD retrieves DNA Sample from Biocase Provider even if it is not selected in the import configuration
- 11:28 AM bug #8632: ABCD retrieves DNA Sample from Biocase Provider even if it is not selected in the import configuration
- Patrick Plitzner wrote:
> We used the specimen search for DNA in the Taxeditor. This still works so no problems from... - 10:13 AM bug #8632: ABCD retrieves DNA Sample from Biocase Provider even if it is not selected in the import configuration
- So AK, you may decide if this ticket can be fully closed. But I guess so.
- 10:05 AM bug #8632: ABCD retrieves DNA Sample from Biocase Provider even if it is not selected in the import configuration
- We used the specimen search for DNA in the Taxeditor. This still works so no problems from my side
- 03:24 PM bug #8582 (Closed): Taxon Navigator: Classification label not refreshed & new taxa not visible
- Andreas Kohlbecker wrote:
> There is still a problem related to this issue.
>
> The TaxonNavigator is not being r... - 03:22 PM bug #8659 (Closed): Taxon navigator: not refreshed after ABCD file import
- Copied from #8582
The TaxonNavigator is not being refreshed after importing an ABCD file, newly created classifica... - 03:19 PM feature request #8596 (Closed): Add a list of descriptions to the taxon page
- 01:48 PM feature request #8596: Add a list of descriptions to the taxon page
- from my perspective can this ticket be closed.
- 01:46 PM feature request #8596: Add a list of descriptions to the taxon page
- Patrick Plitzner wrote:
> Andreas K.: You mentioned that it is possible to assign **weights** to these blocks. Wit... - 12:36 PM feature request #8596: Add a list of descriptions to the taxon page
- But the tree that I mentioned can be used for both the block here and for the "description detail page" (#8595)
- 12:34 PM feature request #8596: Add a list of descriptions to the taxon page
- Patrick Plitzner wrote:
> Wait, you are going in the wrong direction. We are **not** talking about FeatureTrees here... - 12:30 PM feature request #8596: Add a list of descriptions to the taxon page
- Wait, you are going in the wrong direction. We are **not** talking about FeatureTrees here. Just about the order of T...
- 12:09 PM feature request #8596: Add a list of descriptions to the taxon page
- Andreas Müller wrote:
> Andreas Kohlbecker wrote:
> Can you please explain this a bit more? Is there a Feature tr... - 11:57 AM feature request #8596: Add a list of descriptions to the taxon page
- Andreas Kohlbecker wrote:
> Andreas Müller wrote:
> > Do we need a configuration method to define the "Description ... - 11:45 AM feature request #8596: Add a list of descriptions to the taxon page
- Andreas Müller wrote:
> Do we need a configuration method to define the "Description (aggregated)" feature tree? Oth... - 09:39 AM feature request #8596: Add a list of descriptions to the taxon page
- Do we need a configuration method to define the "Description (aggregated)" feature tree? Otherwise it seems to be imp...
- 09:22 AM feature request #8596: Add a list of descriptions to the taxon page
- Currently only the aggregated descriptions are shown.
What still needs to be implemented is the sort order of this... - 03:18 PM bug #5048: cdm-server causes unusual high native memory consumption for jvm
- should we put back to "In Progress" or/and move to next milestone?
- 12:52 PM bug #5048: cdm-server causes unusual high native memory consumption for jvm
- after applying the jdk8 memleak fix the effect on the cdm-server is not as good as for the cdmlib-remote-webapp alone...
- 02:32 PM feature request #8595: Create description detail page
- Code review notes:
* description.inc#1179 : `$enclosing_tag = cdm_feature_block_element_tag_name($feature_block_se... - 12:46 PM feature request #8595: Create description detail page
- Added specs from additivity wiki
- 12:05 PM feature request #8595: Create description detail page
- There are still many open issues (most of them discussed in additivity). So we need a follow up ticket. This ticket a...
- 11:38 AM feature request #8595 (Feedback): Create description detail page
- It is hard to review this ticket since the requirements to the layout of the page are missing in the ticket. Please a...
- 09:20 AM feature request #8595: Create description detail page
- Example: http://test.e-taxonomy.eu/dataportal/preview/campanulaceae/cdm_dataportal/description/dc871867-3d87-4fce-b42...
- 01:34 PM Revision 93666c75 (cdm-dataportal): ref #8596 changing render hint
- 01:12 PM Revision 0152a834 (cdm-dataportal): adding annotation to doc
- 01:09 PM bug #8605 (Worksforme): ClassCastException in Feature editor when adding new Defined Term
- I can't reproduce this either, so it seems as if this has been fixed in the context of another task
- 11:34 AM bug #8605: ClassCastException in Feature editor when adding new Defined Term
- I tested this with the latest nightly on the mentioned database but could not reproduce this behavior.
- 12:41 PM bug #8225: Deleting one of two type designations removes both
- Andreas Müller wrote:
> I change back version as the preliminary fix was done in 5.6 I think. OK?
+1 - 10:16 AM bug #8225: Deleting one of two type designations removes both
- I change back version as the preliminary fix was done in 5.6 I think. OK?
- 10:10 AM bug #8225 (Closed): Deleting one of two type designations removes both
- Created a new ticket for a better fix -> #8654
- 12:32 PM feature request #8657 (Closed): Order description element in portal according to CharacterTree
- 12:13 PM feature request #8656 (Closed): [DISCUSS] Should only characters be allowed for DescriptiveDataSets/Character Matrix?
- du filterst in aggregateDescription() nur DescriptionElements die Characters als Feature haben. Das
~~~java
desc... - 11:35 AM feature request #8044 (Resolved): Add "Move to..." menu to term editor
- 11:15 AM bug #7143 (Closed): Finish not enabled when unprotecting titleCache in new Person dialog
- confirmed!
- 09:08 AM bug #7143: Finish not enabled when unprotecting titleCache in new Person dialog
- this is fixed now.
- 11:09 AM feature request #8238: Allow interoperability between term trees
- Moving to next milestone for remaining issues
- 10:58 AM feature request #6849 (In Progress): [DISCUSS] How to handle "kind of" term creation in TermEditor
- 10:21 AM feature request #6849 (Closed): [DISCUSS] How to handle "kind of" term creation in TermEditor
- Closing this old discussion because the project ends. Documentation can be found in the ticket description and in the...
- 10:51 AM bug #8653: NullPointerException (NPE) when focusing Taxon Name Editor
- Dump deleted as it was not crucial to understand the problem.
- 10:37 AM feature request #8467: Save a "snapshot" of the SpecimenDescriptions used for aggregation
- moving to additivitiy milestone
- 10:36 AM feature request #8242: Implement filtered combo boxes for state selection in CharacterMatrix
- moving to additivitiy milestone
- 10:23 AM feature request #8655 (Duplicate): Handle duplicates in term tree editor
- Copied from #8642:
There is one related issue: if you create a new tree, by default "allow duplicates" is false, w... - 10:22 AM bug #3732: adapt DerivedUnitBaseDetailElement and PreservationMethodMenuPreferences to cdm model changes
- moving to next milestone
- 10:10 AM task #8130: Check if related feature data is cleared when supported facts type is changed
- Move to next milestone for remaining discussion
- 10:09 AM bug #8654 (New): Find a better solution for deleting type designations
- Follow up of #8225
- 10:07 AM feature request #6774: Implement OWL export
- Move to next milestone because this is still considered experimental
- 10:06 AM feature request #8248: Implement OWL import
- Move to next milestone because this is still considered experimental
- 09:58 AM bug #8533 (Closed): missing collector and fieldnumber in abcd import
- > Why did you move it to 5.12. It has status resolved and should therefore be reviewed in 5.11 milestone. If there is...
- 08:57 AM Revision bbe6c98f (cdm-server): ref #5048 disabling url caching per instance for jdk1.8 to avoid memleak
11/06/2019
- 10:57 PM feature request #8253: Authors for genus autonyms
- Please review
- 10:34 PM feature request #8253 (Resolved): Authors for genus autonyms
- Applied in changeset commit:cdmlib|6d023e406becd840d1d95a88137f1bccb4a73eed.
- 10:34 PM Revision b06c96cf (cdmlib): cleanup
- 10:34 PM Revision 6d023e40 (cdmlib): fix #8253 correct parsing and formatting for authors of infra generic autonyms
- 10:09 PM Revision 09a3e42c (cdmlib): cleanup
- 10:06 PM Revision 029fa839 (cdmlib): cleanup
- 06:13 PM bug #5048 (Resolved): cdm-server causes unusual high native memory consumption for jvm
- Applied in changeset commit:cdm-server|d81181d86f476634377346f159ea9edcda67ba38.
- 06:08 PM bug #5048 (In Progress): cdm-server causes unusual high native memory consumption for jvm
- Andreas Kohlbecker wrote:
> I will now equip edit-test and edit-integration with the caches.xml workaround to disabl... - 05:20 PM bug #5048: cdm-server causes unusual high native memory consumption for jvm
- I will now equip edit-test and edit-integration with the caches.xml workaround to disable url caching...
- 06:13 PM Revision d81181d8 (cdm-server): fix #5048 disabling url caching for jdk1.8 to avoid memleak
- 05:06 PM Revision 84503131 (taxeditor): ref #8450 Adjust style of literature description to default description
- 04:03 PM Revision 2cace77b (taxeditor): ref #7143: fix activation of finish button
- 03:53 PM bug #7143: Finish not enabled when unprotecting titleCache in new Person dialog
- I would expect that the finish button is enabled after entering text in the TitleCache field only.
This is not y... - 03:46 PM bug #8631: ABCD import fails to put new taxa into the classification, create mediaspecimens, etc
- Katja Luther wrote:
> Andreas Kohlbecker wrote:
> > * The "Configure Import Dialog" has changed, and has two issues... - 03:31 PM bug #8631: ABCD import fails to put new taxa into the classification, create mediaspecimens, etc
- Katja Luther wrote:
> the nomenclatural code selection page is removed
Did you add a label to the code selection ... - 03:17 PM bug #8631: ABCD import fails to put new taxa into the classification, create mediaspecimens, etc
- Katja Luther wrote:
> Andreas Kohlbecker wrote:
> > There are still some problems which are not yet fixed:
> >
>... - 03:04 PM bug #8631: ABCD import fails to put new taxa into the classification, create mediaspecimens, etc
- Andreas Kohlbecker wrote:
> There are still some problems which are not yet fixed:
>
> * the taxon is not part of... - 03:02 PM bug #8631: ABCD import fails to put new taxa into the classification, create mediaspecimens, etc
- the nomenclatural code selection page is removed
- 02:57 PM bug #8631: ABCD import fails to put new taxa into the classification, create mediaspecimens, etc
- Andreas Kohlbecker wrote:
> There are still some problems which are not yet fixed:
>
> * the taxon is not part of... - 09:23 AM bug #8631: ABCD import fails to put new taxa into the classification, create mediaspecimens, etc
- There are still some problems which are not yet fixed:
* the taxon is not part of the classification.
* the speci... - 03:02 PM Revision 21850e02 (taxeditor): ref #8631: remove nomenclatural code selection page for file import
- 02:54 PM task #8652 (Closed): disentangle confusion when connecting to development cdm instance fails
- 02:51 PM task #8652: disentangle confusion when connecting to development cdm instance fails
- Andreas Kohlbecker wrote:
> apparently these changes are not causing problems.
>
> @Katja: I think the changes th... - 08:57 AM task #8652: disentangle confusion when connecting to development cdm instance fails
- apparently these changes are not causing problems.
@Katja: I think the changes that I made to `ExtReferenceSelecti... - 02:49 PM feature request #8648 (Resolved): Simplify name details view configuration
- default handling is fixed now and labeling is changed as well.
- 02:13 PM Revision 161cf0e4 (taxeditor): show report for abcd file import
- 01:26 PM Revision b5394068 (cdmlib): adding jvmArgs to the maven jetty plugin config to allow for hasslefree mvn jetty:run-forked
- 01:19 PM Revision 6c8d17c5 (taxeditor): ref #8470: export ConstraintViolationException
- 01:06 PM feature request #8454 (Closed): Only allow certain patterns as username and groupname
- tested it in Editor and it seems to work (tested ' ', 'ö', '*')
- 01:03 PM feature request #8470 (Resolved): Handle username constraints in user and group editing
- Applied in changeset commit:taxeditor|2579d7d6b01fd0879bee9ab3a7621fbe8aec1009.
- 01:03 PM Revision 2579d7d6 (taxeditor): fix #8470: handle constraint violation exception for username
- 12:14 PM Revision 0c9b9bc2 (taxeditor): ref #8450 Fix order of taxon descriptions in matrix
- 11:52 AM Revision ed2341ee (cdmlib): ref #8450 Remove description type labels
- 11:03 AM Revision 99310e0d (taxeditor): ref #8648: default handling in name details preference - continue
- 10:42 AM Revision 37cff480 (taxeditor): ref #8648: default handling in name details preference
- 10:20 AM bug #8653 (Resolved): NullPointerException (NPE) when focusing Taxon Name Editor
- 10:18 AM bug #8653: NullPointerException (NPE) when focusing Taxon Name Editor
- Please remove milestone afterwards. It is an milestone internal bugfix.
- 10:17 AM bug #8653: NullPointerException (NPE) when focusing Taxon Name Editor
- As far as I can see this came with one of the latest changes. Should be easy to fix. Important before release.
- 09:42 AM bug #8653: NullPointerException (NPE) when focusing Taxon Name Editor
- Attaching dump of the DB: attachment.cdm_caryophyllales_demo_01.sql.bz2
- 09:35 AM bug #8653 (Closed): NullPointerException (NPE) when focusing Taxon Name Editor
- * I did the same ABCD import of `Arenaria_ABCD_one_unit.xml`
three times
* Then search for Arenaria serpyllifoli*
... - 10:19 AM Revision 00a7ae7a (taxeditor): ref #8648: set default for local, label issues
- 10:14 AM Revision d2e01dec (taxeditor): ref #8653: fix NPE
- 09:29 AM bug #8632: ABCD retrieves DNA Sample from Biocase Provider even if it is not selected in the import configuration
- The question in comment 4 is for Patrick, so I am reassigning this ticket
- 09:27 AM bug #8582 (In Progress): Taxon Navigator: Classification label not refreshed & new taxa not visible
- There is still a problem related to this issue.
The TaxonNavigator is not being refreshed after importing an ABCD ... - 09:18 AM bug #8650 (Closed): PermissionDenied Exception for Teams when editing distributions
- this seems to be a problem of updated caches because of the IPNI import. After running the cache updater the problem ...
- 09:12 AM bug #8630 (Closed): ClassCastException when ABCD import has finished
- The problem is no longer reproducible, closing the issue.
- 09:09 AM bug #8634 (Closed): NullPointerException (NPE) in PreferencesUtil.getLocalAbcdImportConfigurator() on starting ABCD import
- could no longer reproduce the issue, closing the ticket.
11/05/2019
- 05:39 PM Revision 7ef0f93e (cdmlib): ref #8651 rename TransmissionEngineDistribution to DistributionAggregation
- 05:14 PM Revision ac2cee48 (cdmlib): ref #8651 fix compile error on linux (3rd try)
- 05:07 PM Revision b997cab9 (cdmlib): ref #8651 minor changes to TransmissionEngineDistribution and moving test
- 05:02 PM Revision 753627ae (cdmlib): ref #8651 fix compile error on linux (2nd try)
- 04:54 PM task #8652 (Resolved): disentangle confusion when connecting to development cdm instance fails
- Applied in changeset commit:taxeditor|2456bd7d10249f074c710ec82344610ec9226b5e.
- 04:53 PM task #8652 (Closed): disentangle confusion when connecting to development cdm instance fails
- It can be quite cumbersome to find the cause when connecting to a development cdm instance fails.
To connect this wa... - 04:54 PM Revision 2456bd7d (taxeditor): fix #8652 cleaning code related to system property cdm.server.dev.port and better error reporting
- 04:51 PM Revision 8b518049 (cdmlib): ref #8651 fix compile error on linux
- 04:39 PM feature request #8613 (Feedback): For distribution editor default reference should be used also when new source is created
- Does not work for me yet. The reference field is still empty if I selected a base source and then added a new source....
- 10:00 AM feature request #8613 (Resolved): For distribution editor default reference should be used also when new source is created
- this is implemented, please review
- 04:36 PM feature request #8648: Simplify name details view configuration
- Minor issue: can you rename the menu label in DB prefs from "Name Details View" to "Details View". From the given con...
- 04:34 PM feature request #8648 (Feedback): Simplify name details view configuration
- "Simple Name Details View" have been renamed as expected.
Also removing the field "Show simplified name detials vi... - 11:35 AM feature request #8648 (Resolved): Simplify name details view configuration
- Applied in changeset commit:taxeditor|b99d2118937199a57d8b4907a76eba41de08ed82.
- 11:24 AM feature request #8648 (Closed): Simplify name details view configuration
- mail AM:
Hallo Katja,
ich frage mich gerade, ob wir das Dropdown Feld „Show simplified name detials view with ... - 04:26 PM feature request #8410: Add nomenclatural code edition to ruleConsidered in TaxEditor
- Now the indentation is for both the label and the textfield. but I think for the label it is enough. Otherwise the la...
- 04:22 PM feature request #8410: Add nomenclatural code edition to ruleConsidered in TaxEditor
- The list should always show an empty entry to make it possible to delete the field.
- 04:21 PM feature request #8410 (Feedback): Add nomenclatural code edition to ruleConsidered in TaxEditor
- I tried to change the nom code ICNAFP to ICZN for a name but the list did not change even after reopening the taxon.
- 01:42 PM feature request #8410 (Resolved): Add nomenclatural code edition to ruleConsidered in TaxEditor
- sorry, the last changes were not pushed, now they are available in the actual nightly build.
the combo box is fill... - 04:21 PM Revision 27b19ff5 (taxeditor): ref #8450 Show description type icons in factual data view
- 04:21 PM Revision 34ec2ac2 (cdmlib): Fix potential NPE
- 04:09 PM Revision 771a5159 (cdmlib): cleanup
- 04:09 PM Revision 7c5cb694 (cdmlib): ref #8651 first base classes for unified description aggregation and move SDD aggregation from service to new class
- 04:07 PM task #8651 (Closed): Unify description aggregation methods (distribution and structured descriptive data)
- Currentyl we have at least 2 methods/classes handling description aggregation, 1 for distribution data called Transmi...
- 03:14 PM bug #8650 (Closed): PermissionDenied Exception for Teams when editing distributions
- mail of JP:
Hallo Katja, heute bekomme ich ständig diese Fehlermeldung, woran könnte das liegen? Liebe Grüße Jonat... - 03:12 PM bug #8533: missing collector and fieldnumber in abcd import
- Why did you move it to 5.12. It has status resolved and should therefore be reviewed in 5.11 milestone. If there is a...
- 02:06 PM bug #8498 (In Progress): Set Flags should show the current status of the flags
- as we closed #8282, we can use this ticket to find out why there is a delay between setting the flag and getting the ...
- 02:04 PM feature request #8486 (Closed): Indicating doubtful state in navigator and add set-doubtful to Set-Flags menu
- 01:56 PM bug #8584 (Closed): Appended phrase should be shown on top level for misapplied names
- created new ticket for the layout issues (#8649) and close this ticket
- 01:54 PM feature request #8649 (New): Layout issues for misapplied name/pro parte synonyms
- Some open minor issues (open new ticket if not immediately fixable):
* Add identation (whitespace at beginning) f... - 01:52 PM bug #8531: factual data and media view always opened when opening taxon
- this is fixed.
Last problem is when the facts view is closed while the distribution editor is already open, then t... - 01:49 PM feature request #8572 (Closed): Rule considered configurable
- 01:47 PM feature request #8624 (In Progress): Add abbrev title cache to search in bulk editor
- 01:46 PM bug #8626 (Duplicate): NullPointerException (NPE) on saving Specimen Editor (list)
- I could not reproduce the problem, but I still keep #7699, so I close this as duplicate
- 01:44 PM bug #8631 (Resolved): ABCD import fails to put new taxa into the classification, create mediaspecimens, etc
- 01:41 PM Revision 37811f53 (taxeditor): ref #8410: add only nomenclatural code editions for code of name to combo
- 01:39 PM Revision b03087a0 (cdmlib): Fix class cast for streams in aggregation
- 01:27 PM Revision 6f4ce4b3 (taxeditor): reopen factual data and media view for taxa when opened before
- 01:25 PM bug #8622 (Resolved): Missing specimen Identifier leads to empty brackets in portal
- 01:25 PM feature request #8596 (Resolved): Add a list of descriptions to the taxon page
- 01:25 PM feature request #8467 (Resolved): Save a "snapshot" of the SpecimenDescriptions used for aggregation
- 01:24 PM feature request #8625 (Closed): Add count parameter to StateData
- This is already used in the aggregation algorithm and works fine
- 01:21 PM feature request #8595 (Resolved): Create description detail page
- 12:42 PM feature request #5873: Implement rights&roles for TaxEditor distribution editor
- I reverted some of the changes because it worked only if the user had rights on a subtree. so move the ticket to 5.12
- 12:32 PM Revision 8e675e6a (taxeditor): ref #8239: revert some of the implementations for the next release
- 11:34 AM Revision b99d2118 (taxeditor): fix #8648: simplify name details view
- 11:34 AM Revision 4963861e (taxeditor): ref #8634: fix NPE and biocase provider for dna search
- 10:30 AM Revision 7f287710 (cdmlib): cleanup
- 10:21 AM bug #7143 (Resolved): Finish not enabled when unprotecting titleCache in new Person dialog
- Katja Luther wrote:
> Andreas Kohlbecker wrote:
>
> With the actual nightly I cannot reproduce this problem anymo... - 10:09 AM bug #7143: Finish not enabled when unprotecting titleCache in new Person dialog
- Andreas Kohlbecker wrote:
> Finish is not enabled when only the title cache is filled with data.
>
> Even after e... - 10:07 AM bug #8632: ABCD retrieves DNA Sample from Biocase Provider even if it is not selected in the import configuration
- Patrick, can you please check if the DNA search is somehow needed in additivity context? I don't expect it but just t...
- 09:13 AM bug #8632 (Resolved): ABCD retrieves DNA Sample from Biocase Provider even if it is not selected in the import configuration
- I removed the possibility to search for DNA for the abcd import because it created exceptions during save and it was ...
- 09:59 AM Revision 5548f6bc (cdm-dataportal): ref #8595 Fix compile error
- 09:56 AM bug #8634 (Resolved): NullPointerException (NPE) in PreferencesUtil.getLocalAbcdImportConfigurator() on starting ABCD import
- this is fixed
- 09:53 AM Revision 18110d8c (cdm-dataportal): ref #8595 Fix compile error
- 09:39 AM Revision d61e49ac (cdm-dataportal): ref #8595 Show specimen titleCache for source descriptions
- 09:24 AM Revision 074747bf (cdm-dataportal): ref #8595 Show characters in italic instead of bold
- 09:05 AM Revision 1601d218 (cdm-dataportal): ref #8595 Change header label for aggr. descriptions
- 09:01 AM bug #8630 (Resolved): ClassCastException when ABCD import has finished
- this is fixed.
11/04/2019
- 10:06 PM Revision 14e5960f (cdmlib): cleanup
- 10:06 PM Revision 0668c27e (cdmlib): better exception handling in MethodMapper
- 06:31 PM bug #5048: cdm-server causes unusual high native memory consumption for jvm
- a single cdmlib-remote-webapp instance started from within the eclipse ide:
* RSS: 1297,05078125 MB
* heap used:... - 06:07 PM bug #5048: cdm-server causes unusual high native memory consumption for jvm
- timeseries monitoring of the cdm-server running at edit-test with 6 instances:
This diagr... - 06:16 PM bug #8633: version 5.11 can not connect to workshop servers
- As this was only preliminary in 5.11 beta I remove target version
- 06:08 PM feature request #8410: Add nomenclatural code edition to ruleConsidered in TaxEditor
- Andreas Kohlbecker wrote:
> Andreas Müller wrote:
> > One more requirement I forgot to mention before:
> >
> > T... - 03:35 PM feature request #8410: Add nomenclatural code edition to ruleConsidered in TaxEditor
- Andreas Müller wrote:
> One more requirement I forgot to mention before:
>
> The list should show only those code... - 02:54 PM feature request #8410 (Feedback): Add nomenclatural code edition to ruleConsidered in TaxEditor
- One more requirement I forgot to mention before:
The list should show only those codes which fit to the nomenclatu... - 02:50 PM feature request #8410: Add nomenclatural code edition to ruleConsidered in TaxEditor
- Katja Luther wrote:
> Andreas Müller wrote:
> > Works!
> >
> > Only some layout issues:
> >
> > * ~~Please a... - 12:48 PM feature request #8410 (Resolved): Add nomenclatural code edition to ruleConsidered in TaxEditor
- 12:05 PM feature request #8410: Add nomenclatural code edition to ruleConsidered in TaxEditor
- Andreas Müller wrote:
> Works!
>
> Only some layout issues:
>
> * ~~Please add identation to label to make cl... - 06:05 PM bug #8626 (Feedback): NullPointerException (NPE) on saving Specimen Editor (list)
- I guess we can close this as Duplicate for #7699 (or as Workforme if you don't think #7699 is correct). Please remov...
- 03:08 PM bug #8626: NullPointerException (NPE) on saving Specimen Editor (list)
- I remember that it was possible to reproduce this problem on the day when I wrote this ticket. Today, however, the pr...
- 05:48 PM feature request #8647 (New): Allow selecting named areas, ranks, presence-absence terms from term trees/collections
- It is possible now to create term trees for Named Areas, Presence-Absence-Terms and Ranks (and ofcourse Features).
... - 04:31 PM bug #8610 (Closed): tagged_text_extract_nomstatus() fails handling more than one status
- 04:31 PM bug #8610: tagged_text_extract_nomstatus() fails handling more than one status
- =Labiatae Juss., Gen. Pl.: 110. 1789, nom. cons.2, nom. altern.2
is now being displayed correctly in the data port... - 04:15 PM bug #7143 (Feedback): Finish not enabled when unprotecting titleCache in new Person dialog
- Finish is not enabled when only the title cache is filled with data.
Even after entering the family name it still ... - 04:08 PM bug #8605: ClassCastException in Feature editor when adding new Defined Term
- I extended the ticket descriptions to clarify what I did
- 04:03 PM Revision 4b428921 (cdm-dataportal): ref #8595 Show count for StateData + only show data when state!=null
- 03:58 PM bug #8374: Save genus generated for a species with a different reference
- removed version as this is a duplicate
- 03:44 PM feature request #8226 (Closed): make modifiers for description elements configurable
- Yes, this works now (except for the issue to be solved in #8236, but this is another ticket)
- 10:49 AM feature request #8226 (Resolved): make modifiers for description elements configurable
- now it should work.
- 03:33 PM Revision 879048dd (taxeditor): ref #8642 Change menu oder for tree editors
- 03:33 PM feature request #8572 (Feedback): Rule considered configurable
- Personally I would give even more indentation (see #8572#note-8). But this is up to you.
Generally we can close th... - 01:39 PM feature request #8572 (Resolved): Rule considered configurable
- I think all open issues are fixed.
* sub preference have more indent
* the label for "Secundum enabled..." is ful... - 03:24 PM feature request #8642 (Feedback): Add tree editor for rank, NamedArea and PresenceAbsence
- Generally works. Menu order please like discussed with Feature and Named Area on top, separator, PresenceAbsence, Ran...
- 03:24 PM bug #8582 (Closed): Taxon Navigator: Classification label not refreshed & new taxa not visible
- Refreshing obviously is working again. Thanks for fixing.
- 02:38 PM bug #8639: Reorder Names in Preferences
- Andreas Kohlbecker wrote:
> I would prefer seeing these entries in alphabetical order.
Alphabetical order is the... - 01:21 PM bug #8639: Reorder Names in Preferences
- I would prefer seeing these entries in alphabetical order.
For me the new suggestion is harder to comprehend than... - 02:02 PM Revision 0b52ae5c (cdmlib): revert changes in abcd import test
- 01:39 PM Revision 064a8014 (taxeditor): ref #8450 Fix initial expansion state when refreshing matrix
- 01:37 PM Revision 2d931a85 (cdmlib): ref #8450 Display StateData.count if present
- 01:36 PM task #8466 (Closed): Delete FeatureTree tables
- 01:22 PM Revision 54c2a6e5 (taxeditor): ref #8572: some more indention for sub preferences
- 01:18 PM Revision 5006c242 (taxeditor): ref #8572: rule considered and code edition enable/disable in preferences
- 12:57 PM Revision 9b17d62b (taxeditor): layout issues in name details view preference
- 12:48 PM Revision 25364108 (taxeditor): ref #8410: add indent to code edition
- 10:57 AM bug #8645: rename menu item General > Import > "OWL Import" to "Term Tree OWL Import"
- Also Term Tree is not the really correct label as the import is for importing the whole ontology for structured descr...
- 10:48 AM Revision 6e9bf931 (taxeditor): ref #8226: fix show modifier
- 08:47 AM Revision 29b04663 (cdmlib): minor refactoring
11/03/2019
11/02/2019
- 10:26 PM bug #5048: cdm-server causes unusual high native memory consumption for jvm
- The diagnosis method described in this article may help analyzing the problem: https://technology.blog.gov.uk/2015/12...
- 05:44 PM bug #8646: Character Details View should provide more information on the structure and property terms
- This could be done
a. by extending the label by this information or
b. by showing an infobox when hovering ove... - 05:37 PM bug #8646 (New): Character Details View should provide more information on the structure and property terms
- It should be possible the get more information on the structure and property term which make up the Character
![]... - 05:27 PM bug #8645 (Closed): rename menu item General > Import > "OWL Import" to "Term Tree OWL Import"
- This import function is not a general OWL import.
The information on the nature of the data to be imported must be m...
11/01/2019
- 05:32 PM task #8644 (New): [PESI][FE] Verify FauEu PESI export
- 05:26 PM feature request #8643 (In Progress): [PESI][FE] Adpat new PESI export to FE requirements
- 05:24 PM feature request #8643 (In Progress): [PESI][FE] Adpat new PESI export to FE requirements
- PESI export has changed. FE export still needs to be adapted to these changes
- 05:25 PM Revision 0d988e0a (cdmlib-apps): ref #8643 adapt PesiExportActivatorFE to current state
- 05:10 PM Revision bb4d8757 (cdmlib-apps): cleanup
- 05:05 PM Revision 446b1e61 (cdmlib): ref #8450 Set "count" when aggregating StateData
- 04:45 PM Revision 882e2c02 (cdm-dataportal): ref #8595 Show aggregation description elements on taxon page
- 03:07 PM Revision caacf65b (taxeditor): adapt TaxEditor Test-H2 to model changes v5.11
- 03:06 PM Revision c6865762 (cdm-vaadin): adapt vaadin Test-H2 to model changes v5.11
- 02:55 PM feature request #8642 (Resolved): Add tree editor for rank, NamedArea and PresenceAbsence
- Applied in changeset commit:taxeditor|43fdbc98815ef71a54c68fe96a11ea189355accc.
- 02:52 PM feature request #8642 (Closed): Add tree editor for rank, NamedArea and PresenceAbsence
- 02:53 PM Revision 43fdbc98 (taxeditor): fix #8642 Add tree editor for rank, NamedArea and PresenceAbsence
- 02:43 PM task #8466 (Resolved): Delete FeatureTree tables
- Applied in changeset commit:cdmlib|74b86998eb26eb3fe74b837048f1aa9b1f0b9d3b.
- 02:43 PM feature request #8625 (Resolved): Add count parameter to StateData
- Applied in changeset commit:cdmlib|320e07b697daddc4133325fdea62ca414e0e582e.
- 02:26 PM Revision 5f0a3093 (cdmlib): update H2 test data and model cache
- 02:20 PM Revision 3a1e8815 (cdmlib): cleanup
- 02:10 PM Revision d7c686f4 (cdmlib): ref #8625 add count to StateData to FullCoverageDataGenerator
- 01:28 PM Revision 74b86998 (cdmlib): fix #8466 remove old FeatureTree tables
- 01:27 PM Revision 748cefc1 (cdmlib): cleanup
- 01:26 PM Revision 320e07b6 (cdmlib): fix #8625 add count to StateData
- 12:32 PM Revision 2b8a30e9 (cdmlib): move categorical data up in StateData and cleanup
- 12:11 PM Revision bd074233 (cdmlib): some cleanup for TransmissionEngineDistribution
- 12:10 PM Revision 0ced6c29 (cdmlib): cleanup
- 11:52 AM bug #8582: Taxon Navigator: Classification label not refreshed & new taxa not visible
- I guess this should be reviewed.
- 11:51 AM bug #8641: IAE (IllegalArgumentException) when exchanging name in taxon details view
- It happened when I tried to deduplicate some names in E+M after the IPNI 2019 import
- 11:50 AM bug #8641 (New): IAE (IllegalArgumentException) when exchanging name in taxon details view
- beim Austausch eines Namens für ein Taxon (also Wiederverwendung von Namen) bekomme ich regelmäßig (aber längst nicht...
- 11:43 AM task #8609 (Closed): Rename Taxon Node context menu entry Open in .. -> Taxon Node Wizard
- This seems to be fixed and can be closed.
Please reopen if some task is still left. - 11:38 AM bug #8622 (Feedback): Missing specimen Identifier leads to empty brackets in portal
- I will review after release on publication dataportal.
Can you please still add the link to the relevant portal si... - 11:30 AM feature request #7457 (Closed): E+M: Allow filtering for only published in search
- Seems to work.
Note: maybe we also need something like "Only unpublished", but this is another issue and needs an ... - 11:24 AM bug #8640 (New): Specimen preferences should be disabled if specimens are generally switched off
- If "Show specimen related views and menu entries" is switched off the other preferences should be disabled as they pr...
- 11:19 AM feature request #8226 (Feedback): make modifiers for description elements configurable
- Does not seem to work. If I have all switched on the modifiers do stil not show up.
- 11:13 AM feature request #8410 (Feedback): Add nomenclatural code edition to ruleConsidered in TaxEditor
- 10:57 AM feature request #8410: Add nomenclatural code edition to ruleConsidered in TaxEditor
- Works!
Only some layout issues:
* Please add identation to label to make clear belongs and depends on state of... - 11:13 AM feature request #8486 (Feedback): Indicating doubtful state in navigator and add set-doubtful to Set-Flags menu
- Sometimes I realized that the menu only synchronizes after some time. So if I swith from doubtful to not doubful and ...
- 11:08 AM feature request #8486: Indicating doubtful state in navigator and add set-doubtful to Set-Flags menu
- Katja Luther wrote:
> now doubtful is "??", unplaced "?"
I think it is the other way round. But probably it is be... - 10:49 AM feature request #8568 (Closed): improve performance for term and vocabulary preference pages
- Performance is still not really fast sometimes but definetely acceptable for (seldom used) preferences. So we can clo...
- 10:12 AM bug #8639 (New): Reorder Names in Preferences
- Currently the order is
* Nomenclatural Code
* Nomenclatural Status
* Ranks
* Type Designations
* Name De... - 10:03 AM feature request #8572: Rule considered configurable
- Andreas Müller wrote:
> Please have some more identation for the sub-preferences on the name details view. Currently... - 09:56 AM feature request #8572: Rule considered configurable
- Andreas Müller wrote:
> The filtering does not work! Neither for project prefs nor for local prefs
A sorry this w... - 09:55 AM feature request #8572: Rule considered configurable
- Please have some more indentation for the sub-preferences on the name details view. Currently it is only ~1/3 of the ...
- 09:44 AM feature request #8572: Rule considered configurable
- If "rule considered" is not switched on also "Code edition" should be automatically be switched off in the preference...
- 09:42 AM feature request #8572: Rule considered configurable
- ~~The filtering does not work! Neither for project prefs nor for local prefs~~ => see #8572#note-9
- 09:38 AM feature request #8572 (Feedback): Rule considered configurable
- Please use human readable version for rule considered. E.g. by using getMessage().
@AK: which method do you use in... - 09:46 AM bug #8570: PolytomousKeyNode.otherNode missing in REST service response
- I will check this after release. We should link the related dataportal example from cuba(?) - see mail WGB.
- 09:34 AM bug #8584 (Feedback): Appended phrase should be shown on top level for misapplied names
- 09:34 AM bug #8584: Appended phrase should be shown on top level for misapplied names
- Yes the order is correct now and also the selection for top level controls makes sense.
Some open minor issues (op...
10/31/2019
- 03:58 PM Revision 42e926d0 (cdmlib): cleanup
- 03:51 PM Revision 2f18fc04 (cdmlib): cleanup
- 02:29 PM Revision a3314925 (cdmlib): add dummy file to cdmlib-cache/src/test/java to make the folder exist in git-repo
- 12:17 PM bug #8638 (New): Session behavior not deterministic
- It seems that the behavior of the session cache handling is not deterministic. I did exchange a name for a taxon by a...
- 11:27 AM bug #8637 (New): CCE when opening Session View for taxon navigator
- When trying to open the session view for the taxon navigator I get the below exception.
I think it is expected tha...
10/30/2019
- 11:39 PM bug #8612 (Closed): Import E+M IPNI names
- 11:38 PM bug #8612 (Resolved): Import E+M IPNI names
- Applied in changeset commit:cdmlib-apps|910fd9d6b6d97781707bfd9a6d48a3486975ebc3.
- 11:38 PM Revision 910fd9d6 (cdmlib-apps): fix #8612 final changes to E+MIpniImport
- 09:12 PM bug #8626: NullPointerException (NPE) on saving Specimen Editor (list)
- This is probably the same issue as in #7699 and especially #7699#note-6
- 09:11 PM bug #8626: NullPointerException (NPE) on saving Specimen Editor (list)
- AK, can you explain how far this ticket is related to the "copied to" ticket #8627
- 01:54 PM bug #8626: NullPointerException (NPE) on saving Specimen Editor (list)
- Is this behaviour reproducable? I could not reproduce it
- 04:33 PM Revision 824f5653 (cdmlib): ref #8450 Fix potential NPE
- 04:30 PM Revision eb4a043b (cdmlib): ref #8450 Recurse through parent taxon nodes for default description
- 03:03 PM bug #8605 (Feedback): ClassCastException in Feature editor when adding new Defined Term
- I could not reproduce this exception. But I am not sure what you mean with the 3rd step "choose an existing term (e.g...
- 02:45 PM bug #8605 (In Progress): ClassCastException in Feature editor when adding new Defined Term
- 03:00 PM Revision a2d32af1 (cdmlib): remove whitespace after title for default references with only title and year
- 02:55 PM Revision 4ebcecf9 (cdmlib-apps): ref #8612 implementation of E+MIpniImport (near ready)
- 02:19 PM Revision c2f6e700 (cdmlib): fix test because dna provider is not set as default anymore
- 02:00 PM Revision cdbfdfb0 (cdmlib): cleanup
- 02:00 PM Revision 52a42c7d (cdmlib): ref #8612 use better generics for findByExample
- 01:49 PM Revision e28238b0 (cdmlib): add test file
- 01:27 PM Revision 0203fed0 (taxeditor): rename cdm instance to database
- 01:18 PM Revision 8a720214 (taxeditor): ref #8631: remove the possibility to search for dna when importing from abcd file
- 01:18 PM bug #8631: ABCD import fails to put new taxa into the classification, create mediaspecimens, etc
- As a workaround the possibility to search for dna is disabled for file import. For the biocase seach it is still poss...
- 10:26 AM bug #8631: ABCD import fails to put new taxa into the classification, create mediaspecimens, etc
- The ClassCastException should be solved with the last commit
- 09:56 AM bug #8631 (In Progress): ABCD import fails to put new taxa into the classification, create mediaspecimens, etc
- 09:55 AM bug #8631: ABCD import fails to put new taxa into the classification, create mediaspecimens, etc
- the media was not imported because of a NPE, this is fixed.
the dna was not associated to the specimen because of wr... - 01:07 PM Revision 4ef89673 (cdmlib): add test for import abcd with search for available dna
- 01:07 PM Revision a021cb95 (cdmlib): remove default dna source
- 01:05 PM Revision c3d2f6db (cdmlib): change biocase provider to herbar to fix test
- 12:04 PM Revision be76eb89 (taxeditor): use same ABCDImportConfiguratorWizardPage for file import and search
- 10:21 AM Revision 92546b65 (taxeditor): ref #8631: fix ClassCastException for abcd import and NPE in abcd preferences
- 09:54 AM Revision f7717334 (cdmlib): ref #8631: fix errors in abcd import
- 12:19 AM bug #8636 (New): Handle "Change to Person" same as deduplication
- Currently when changing a single person team to a person the action is immediately saved and no new search is running...
10/29/2019
- 06:14 PM task #8635 (In Progress): install collectd + facette for server monitoring
- 06:14 PM task #8635 (Closed): install collectd + facette for server monitoring
- We will use collectd + facette for now:
Test installation on edit-test as client and edit-staging as master to c... - 05:57 PM bug #8634 (Closed): NullPointerException (NPE) in PreferencesUtil.getLocalAbcdImportConfigurator() on starting ABCD import
~~~~
login : admin
editor version : 5.11.0.qualifier
server : 160.45.63.230 (edit-WS I) / caryophyllales_demo_01...- 05:48 PM bug #8633 (Closed): version 5.11 can not connect to workshop servers
- connecting works again - thnx!
- 05:44 PM bug #8633 (Resolved): version 5.11 can not connect to workshop servers
- please review whether this is fixed with the last changes
- 05:14 PM bug #8633 (Closed): version 5.11 can not connect to workshop servers
- a picture can tell so much more that 1000 words:
this works with version 5.10 - 05:43 PM Revision df69489f (taxeditor): fix login problem
- 04:50 PM bug #8632 (Closed): ABCD retrieves DNA Sample from Biocase Provider even if it is not selected in the import configuration
- same import configuration shown in #8631
- 03:28 PM bug #8631 (Closed): ABCD import fails to put new taxa into the classification, create mediaspecimens, etc
- To reproduce:
* import attachment:Arenaria_ABCD_one_unit.xml with the below options
at... - 03:08 PM bug #8630 (Closed): ClassCastException when ABCD import has finished
- after a ABCD import has run a ClassCastException happens on processing the result data:
~~~
!MESSAGE An internal ... - 02:24 PM bug #8629: Specimen editor (tree) new FieldUnit not in hierarchy
- The problem I rather a usability problem. The specimen can be dragged onto the field unit to create the hierarchy. Bu...
- 02:16 PM bug #8629 (New): Specimen editor (tree) new FieldUnit not in hierarchy
- I created a new field unit for a specimen by doing a right click on the specimen which has no field unit yet and choo...
- 01:53 PM bug #8628 (Closed): Add ORCID as person identifier
- WGB:
wir sollten darüber nachdenken, wie wir ORCID Identifier mit Personen verbinden - das wäre ein zusätzliches A... - 01:25 PM bug #8582 (Resolved): Taxon Navigator: Classification label not refreshed & new taxa not visible
- Applied in changeset commit:taxeditor|5f0db2701c5631c2d83e7441fc963adfba5c9f8a.
- 01:24 PM Revision 5f0db270 (taxeditor): fix #8582: fix refresh in navigator
- 01:24 PM bug #8627 (New): NullPointerException (NPE) on saving Specimen Editor (list)
- I followed the instrcutions given in Manual-EDIT-Platform-v.1.19b Chapter 4.3.7 and 9.4:
* is started as described... - 01:18 PM bug #8626 (Duplicate): NullPointerException (NPE) on saving Specimen Editor (list)
- I followed the instrcutions given in Manual-EDIT-Platform-v.1.19b Chapter 4.3.7 and 9.4:
* Start with fresh db car... - 01:17 PM bug #8498: Set Flags should show the current status of the flags
- this is already done by showing either "set doubtful" or "remove doubtful" as menu item. But there is a problem with ...
- 12:49 PM bug #7143 (Resolved): Finish not enabled when unprotecting titleCache in new Person dialog
- now it should work correctly, please review
- 12:48 PM Revision 788e46eb (taxeditor): ref #7143: enable finish correctly when titlecache is set
- 12:31 PM feature request #8625 (Closed): Add count parameter to StateData
- `count` should be used to count the number of states summarized in one StateData
Data example for leaf color:
bla... - 11:53 AM bug #8584 (Resolved): Appended phrase should be shown on top level for misapplied names
- please have a look whether the order of the fields make sense. Now all taxon related fields are at the top of the sec...
- 11:48 AM Revision 9ca58dbb (taxeditor): ref #8584: move appended phrase and publish flag
- 11:28 AM feature request #8568 (Resolved): improve performance for term and vocabulary preference pages
- please review
- 10:30 AM feature request #8624 (Closed): Add abbrev title cache to search in bulk editor
- The bulk editor results should also contain results for caches containing abbreviations like TeamOrPerson.nomenclatur...
10/28/2019
- 07:11 PM feature request #8623: BulkEditors: feedback if search is still running/ready and how many records were found
- For long time there is a requirement already to show the number of returned records for the bulk editor. This require...
- 07:08 PM feature request #8623 (New): BulkEditors: feedback if search is still running/ready and how many records were found
- Why did you set this to Feedback?
- 05:33 PM feature request #8623 (Feedback): BulkEditors: feedback if search is still running/ready and how many records were found
- This is actually working but I was too im patient after hitting enter, the search was already executing but without f...
- 05:16 PM feature request #8623 (New): BulkEditors: feedback if search is still running/ready and how many records were found
- It would be nice if the search in a BulkEditor would be executed when the user hits `enter` after typing the query st...
- 03:58 PM Revision d02bffd6 (taxeditor): ref #8450 Fix config labels for default matrix values
- 12:19 PM Revision 34a22853 (cdmlib-apps): Merge branch 'master' of ssh://dev.e-taxonomy.eu/var/git/cdmlib-apps
- 11:35 AM bug #8622 (Resolved): Missing specimen Identifier leads to empty brackets in portal
- 11:35 AM bug #8622 (Closed): Missing specimen Identifier leads to empty brackets in portal
- If a specimen has no identifier like accession number, barcode or catalog number there are empty brackets in the spec...
- 11:21 AM Revision 8241040a (cdmlib): Do not show empty brackets if no identifier is present for specimen
10/27/2019
- 07:28 PM feature request #8137: Implement sources for type designations in data portal
- Note: isLectopye() was renamed to hasDesignationSource()
10/26/2019
- 08:52 AM Revision d2c54d6f (cdmlib): cleanup
- 08:51 AM Revision f270c866 (cdmlib): normalize getAllXXX methods in ReferenceService
- 08:16 AM Revision 24ff7df5 (cdmlib-apps): cleanup
- 08:15 AM Revision b5f5a43c (cdmlib-apps): ref #8612 first implementation of E+MIpniImport
- 08:11 AM Revision 31502678 (cdmlib): cleanup
- 08:10 AM Revision 5899ca52 (cdmlib): ref #8612 add marker type for epublished references
- 08:10 AM Revision 932e616d (cdmlib): ref #8612 add Now to VerbatimTimePeriod factory methods
- 08:09 AM Revision b04afca3 (cdmlib): ref #8612 add addOriginalSpelling to TaxonName
10/25/2019
- 05:50 PM bug #8588: function of TaxonNode context menu 'Copy' is unclear
- I like the idea of having something like "Copy classification path" or "Copy hierarchy path" or so. This is something...
- 05:37 PM task #8602: Discuss: Local Preferences & Server-sided Preferences in same menu?
- Ich meine nicht das verschieben, sondern die Änderung der Semantik. Wir würden ja das jetzige Konzept aufbrechen, das...
- 05:25 PM task #8602: Discuss: Local Preferences & Server-sided Preferences in same menu?
- Andreas Müller wrote:
> Andreas Kohlbecker wrote:
> > Andreas Müller wrote:
> >
> Also dann müssten wir da alles... - 05:17 PM task #8602: Discuss: Local Preferences & Server-sided Preferences in same menu?
- Andreas Müller wrote:
> Andreas Kohlbecker wrote:
> > Andreas Müller wrote:
> >
> > > Übrigens sollten wir über... - 04:46 PM task #8602: Discuss: Local Preferences & Server-sided Preferences in same menu?
- Andreas Kohlbecker wrote:
> Andreas Müller wrote:
>
> > Also ich finde das weiterhin gut, die Projektsettings dor... - 04:41 PM task #8602: Discuss: Local Preferences & Server-sided Preferences in same menu?
- Andreas Kohlbecker wrote:
> Andreas Müller wrote:
>
> > Übrigens sollten wir über ein Recht nachdenken, die DB-P... - 05:20 PM bug #7143 (In Progress): Finish not enabled when unprotecting titleCache in new Person dialog
- Katja can you check the state here.
But we need to be very careful. I remember this has been fixed once but the fi... - 05:17 PM bug #8597: Name and taxon details: UI counter intuitive regarding cache states
- Andreas Kohlbecker wrote:
> The idea of coloring the unused fields can never be applied consistently to the UI
I ... - 04:58 PM feature request #7417 (Resolved): Make pro parte and partial synonym relationships always visible in data portals
- should be fixed already, review is pending.
- 04:33 PM bug #8547 (New): Default type of a newly created inReference should depend on the type of the reference
- Is there a reason why you did set as "Feedback" on me?
- 04:28 PM bug #8547: Default type of a newly created inReference should depend on the type of the reference
- Katja Luther wrote:
> Katja Luther wrote:
> > this problem appears only when the newly created in-reference is not ... - 03:35 PM bug #8547 (Feedback): Default type of a newly created inReference should depend on the type of the reference
- Katja Luther wrote:
> this problem appears only when the newly created in-reference is not of the type journal.
I... - 04:05 PM bug #8621: Do not save empty sources
- The question is how to implement. Maybe we simply take all OriginalSource Objects from the session cache and check if...
- 03:32 PM bug #8621 (New): Do not save empty sources
- In E+M it happened quite often that completely empty sources were created for what ever reason.
We should either de... - 01:00 PM Revision 9ff7f3d8 (cdmlib-apps): merging fauna Eu - Erms -continue
- 12:55 PM bug #7478: Fix pro parte synonym search
- Generally it looks like pro parte synonyms can be searched for but the result in the dataportal is not nice. New tick...
- 12:46 PM bug #8620 (New): Improve pro parte synonym search result for dataportal
- mir fällt gerade auf, dass die Suchergebnisse von pro parte Synonymen im Portal (z.B. E+M) noch sehr unschön sind. Da...
- 09:07 AM bug #8616: Distribution Editor: allow for hiding columns without data
- The table offers the following options on right-click on a column header:
* hide column
* show all columns
may...
10/24/2019
- 10:59 PM bug #8616: Distribution Editor: allow for hiding columns without data
- But definetly I agree that having a saveable projection might really be useful and should be handled with high priori...
- 10:46 PM bug #8616 (New): Distribution Editor: allow for hiding columns without data
- I agree that it is good to be able to easily return to the same settings as before hand. So we should add the functio...
- 04:42 PM bug #8616: Distribution Editor: allow for hiding columns without data
- The use case:
The user edits a taxonomic group which has a very specific distribution in a set of subareas and wan... - 03:57 PM bug #8616 (Feedback): Distribution Editor: allow for hiding columns without data
- Can you describe the use use case when this is really needed a bit more? For taxonomic users I can't really see this ...
- 03:07 PM bug #8616 (New): Distribution Editor: allow for hiding columns without data
- The Distribution Editor should offer an option to hide those columns which do not have any data. In order to get an o...
- 03:42 PM task #8619 (New): Distribution Selection Dialog: optimize column width for more compact layout
- The columns take more space than needed, when showing only ids in the header an cells.
Some means to reduce the c... - 03:23 PM task #8618 (New): Distribution Selection Dialog:
- add tooltip help texts to all buttons
so fat there is only a text for the third button - 03:22 PM task #8617 (New): rename Distribution Selection Wizard -> Distribution Selection Dialog
- since is not a wizard consisting of multiple steps it should be named "Dialog"
- 01:58 PM bug #8615 (New): Distribution Editor: only available if enabled in local preferences
- data base: WS1:carypophyllales_demo_01
The distribution editor is not available in the context menu:
: typo in doc
- 12:49 PM bug #8614 (New): TermEditor: details view does not follow the active term after save
- To reproduce:
* Add new Feature term
* select the new term and modify it in the details view: e.g.: select Suppor... - 11:46 AM Revision 073285dc (taxeditor): ref #8613: add missing interfaces
- 11:45 AM Revision e01ad27b (taxeditor): set flag... should not be enabled for classifications
- 11:13 AM Revision c39ae40f (taxeditor): adapt granted authority editor to feature based rights
- 11:06 AM Revision df947da5 (taxeditor): ref #8239: disable details for missing rights
- 10:06 AM Revision 44d90517 (taxeditor): ref #8613: using default reference also when adding new source in distribution editor
- 10:05 AM feature request #8613 (Closed): For distribution editor default reference should be used also when new source is created
- To confirm an existing status in a new source, the default reference should also be added to a distribution when addi...
10/23/2019
- 02:45 PM feature request #8489: Further issues for DB preferences
- Andreas Kohlbecker wrote:
> * when I set the subject to for example "Germany" I find no means to reset it to "Defa... - 02:34 PM bug #8612 (Closed): Import E+M IPNI names
- 02:32 PM feature request #8611: [DISCUSS] how to handle editor teams
- There is already a discussion on this somewhere, either in an email thread or in a ticket.
Needs to be discussed. Ha... - 10:23 AM feature request #8611 (New): [DISCUSS] how to handle editor teams
- mail ERS:
Es geht um das Formular „Edit Team“.
1.) An welcher Stelle kann oder soll ich einem Autorenteam (b... - 12:00 PM feature request #4877: implement setting for choosing the SourceTypes to be shown
- in deed, this should be easy to do, priority increased, please increase again once it gets more urgent
- 11:34 AM EDIT Platform Etablierung task #8578: Discuss and find appropriate terms for major editor parts (window, view, editor, panel, pane)
Mein vorläufiges Fazit aus der Umfrage ist, dass alle "Formular-Felder" Editoren sind, also auch der Details-View...- 11:33 AM EDIT Platform Etablierung task #8578: Discuss and find appropriate terms for major editor parts (window, view, editor, panel, pane)
- A poll on editor terms was created on 2019-10-10 : Umfrage https://terminplaner4.dfn.de/enQ2EAH8G7jKtJev
- 10:43 AM Revision 406cc5b9 (cdmlib-apps): remove import TestDatabase
- 09:31 AM Revision 5398839e (cdmlib-apps): Merge branch 'master' of ssh://dev.e-taxonomy.eu/var/git/cdmlib-apps
- 09:30 AM Revision 17d546a5 (cdmlib-apps): ref #1445: smaller changes in activators
- 02:13 AM Revision fae562e5 (cdmlib-apps): update E+M mapping csv file
10/22/2019
- 11:03 PM bug #8610 (Resolved): tagged_text_extract_nomstatus() fails handling more than one status
- Applied in changeset commit:cdm-dataportal|e9ac7c6f253ee5304766130195b650c9767496bb.
- 10:42 PM bug #8610 (Closed): tagged_text_extract_nomstatus() fails handling more than one status
https://www.europlusmed.org/cdm_dataportal/taxon/5f488ccd-526d-4b0c-833d-2014c51e50a7/synonymy?highlite=86e4601d-22...- 11:02 PM Revision e9ac7c6f (cdm-dataportal): fix #8610 tagged_text_extract_nomstatus() can handle multiple status
- 04:41 PM task #8599: TypeDesignation details pane: clarify function of the remove buttons
- Andreas Müller wrote:
> ... what about those cases where a dialog pops up and asks if we want to completely delete o... - 04:19 PM task #8599 (New): TypeDesignation details pane: clarify function of the remove buttons
- About the 2 examples: some whitespace is definetely better then the current solution. If we should use a new button i...
- 04:13 PM task #8599: TypeDesignation details pane: clarify function of the remove buttons
- Andreas Kohlbecker wrote:
> Does the remove button for the Specimen always relally delete the Specimen or is it o... - 03:51 PM task #8599: TypeDesignation details pane: clarify function of the remove buttons
- in the second case the layout could be also changed to
But this would require to adapt t... - 03:45 PM task #8599 (Feedback): TypeDesignation details pane: clarify function of the remove buttons
- How about this?
this way the button group, which acts on the Specimen, is separated fro... - 04:14 PM feature request #8589: Allow undo of typing actions in the textfields
- Andreas Müller wrote:
> Katja Luther wrote:
> > Andreas Müller wrote:
> > > We should decide which action to use f... - 04:02 PM Revision 38672714 (cdmlib-apps): ref #8479 add import source to FauEu2CDM/CDM-2-CDM import
- 03:57 PM Revision 2e4f981e (cdmlib-apps): cleanup
- 03:22 PM task #8598: Prevent from adding type designations to names with informal ranks
- Andreas Müller wrote:
> Not sure if we should implement this.
>
> 1. In E+M there were very rare cases of such na... - 03:17 PM bug #8604: Key Editor View: Details for key missing when key is empty
- Isn't ist possible to add a FocusListener to the PolytomousKey table like `viewer.getControl().addFocusListener(e -> ...
- 02:45 PM task #8602: Discuss: Local Preferences & Server-sided Preferences in same menu?
- Andreas Müller wrote:
> Also ich finde das weiterhin gut, die Projektsettings dort zu haben, wo das Projekt admini... - 02:35 PM Revision 618fae65 (taxeditor): move source section to the bottom of typedesignation section
- 02:12 PM feature request #8569: Supplemental data for PolytomousKeyNodes
- Andreas Kohlbecker wrote:
>This approach would also help in case of the Details-View for a taxon where is is require... - 02:10 PM feature request #8569: Supplemental data for PolytomousKeyNodes
- Interesting idea. Lets use the official(?) name accordion (https://en.wikipedia.org/wiki/Accordion_(GUI)).
Only I ... - 01:14 PM feature request #8569: Supplemental data for PolytomousKeyNodes
- Wouldn't it be an option to extend the supplemental data view, so that it can show the data for multiple entities at ...
- 01:50 PM bug #8586: Feature checkbox lists in perferences can neither be modified nor be scrolled
- I also agree with solution B. But maybe we can add a comma separated label list of the (server side) selected terms. ...
- 12:26 PM bug #8586: Feature checkbox lists in perferences can neither be modified nor be scrolled
- > Set back to "normal"
Agreed!
But, freezing the checklist panes is really ugly. You can't even scroll the chec... - 01:46 PM Revision 9eaf34b7 (taxeditor): adapt editor to changes in typestatus.isLectotype -> hasDesignationSourcve
- 01:25 PM Revision 4a8d1955 (cdmlib): cleanup
- 01:25 PM Revision 0e32b8d4 (cdmlib): rename isLectotype to hasDesignationSource
- 12:03 PM task #8609 (Resolved): Rename Taxon Node context menu entry Open in .. -> Taxon Node Wizard
- 12:02 PM task #8609: Rename Taxon Node context menu entry Open in .. -> Taxon Node Wizard
- 2 x +1 von AK und AM
- 12:01 PM task #8609: Rename Taxon Node context menu entry Open in .. -> Taxon Node Wizard
- Im Englischen habe ich es mit Leerzeichen geschrieben, allerdings im Deutschen habe ich Taxonknoten geschrieben, würd...
- 12:00 PM task #8609: Rename Taxon Node context menu entry Open in .. -> Taxon Node Wizard
- OK, kannst du das erstmal so implementieren. Bei Bedarf können wir es ja nochmal ändern.
AM - 12:00 PM task #8609: Rename Taxon Node context menu entry Open in .. -> Taxon Node Wizard
- Hallo,
ich wäre auch eher für TaxonNode Dialog, alle anderen Einträge, die sich Editoren nennen, gehen nicht als D... - 12:00 PM task #8609: Rename Taxon Node context menu entry Open in .. -> Taxon Node Wizard
- Hallo,
dem schließe ich mich grundsätzlich an. Ich glaube ich hatte das auch hin- und wieder mal angemerkt. Taxon ... - 11:59 AM task #8609 (Closed): Rename Taxon Node context menu entry Open in .. -> Taxon Node Wizard
- Wizard ist ja eher ein Kette von Dialogen, was sich hier öffnet ist ein einfacher Dialog zum Editieren. ("/... Wizard...
- 11:45 AM feature request #8608 (New): Show message in status bar if linking of taxon in navigator failes
- The linking in taxon navoigator failes for taxa without nodes, the check for existing nodes is implemented but we sho...
- 11:31 AM Revision c6828e67 (taxeditor): fix NoSuchElementException for taxa without nodes - continue
- 11:09 AM Revision ffd20969 (taxeditor): fix NoSuchElementException for taxa without nodes
- 10:42 AM Revision c6315a5d (taxeditor): rename taxonnode wizard to taxonnode dialogue
- 10:41 AM Revision a801b069 (taxeditor): rename taxonnode wizard to taxonnode dialog
10/21/2019
- 09:03 PM task #8607: Dataprocessing for GBOL Dataportal/Algaterra
- ToDo Henning Kusber:
Specimen Tool: Check & block all data not related to GBOL or Diatom Group research (as discus... - 01:31 PM task #8607 (New): Dataprocessing for GBOL Dataportal/Algaterra
- In this ticket we describe the steps for dataprocessing before importing data into the algaterra instance.
- 05:39 PM feature request #8137: Implement sources for type designations in data portal
- WGB:
es ist richtig, dass es hier zwei Fälle gibt: Solche, die die Quelle des Records angeben (woher kommt die Inf... - 04:56 PM bug #8604: Key Editor View: Details for key missing when key is empty
- Not sure if this is easy to solve. I had discussions on it with Cherian already. As PKs without node are very rare in...
- 04:51 PM bug #8571: PolytomousKeyNode.otherNode not editable in TaxEditor
- This is probably more or less a duplicate for #2343 so we should check if #2343 can be closed once this is resolved. ...
- 02:01 PM Revision 770828ca (cdmlib-apps): cleanup and ref #8587 handle special form as rank for fungi (IF)
- 01:50 PM feature request #8589: Allow undo of typing actions in the textfields
- Katja Luther wrote:
> Andreas Müller wrote:
> > We should decide which action to use for undo. To me the most intui... - 01:44 PM feature request #8589: Allow undo of typing actions in the textfields
- Andreas Müller wrote:
> We should decide which action to use for undo. To me the most intuitive is "ESC"-key. Any ot... - 01:47 PM Revision a0aeb474 (taxeditor): ref #8562: fix allow override handling in admin distribution status
- 11:52 AM bug #8605: ClassCastException in Feature editor when adding new Defined Term
- Personally I cannot reproduce this, but as it is a CCE we should fix it immediately.
PP+KL can you please decide w... - 11:39 AM task #8602: Discuss: Local Preferences & Server-sided Preferences in same menu?
- Also ich finde das weiterhin gut, die Projektsettings dort zu haben, wo das Projekt administriert wird und die lokale...
- 11:28 AM feature request #4877: implement setting for choosing the SourceTypes to be shown
- I wonder why this ticket has so low priority. I think it should be easy to implement and might be of some relevance i...
- 11:24 AM bug #8601 (Feedback): checkbox lists in preferences - button to expand, collapse, ... not functional
- The buttons are only not functional if "use default settings" is chosen. Therefore I suggest to either close this tic...
- 11:20 AM bug #8586: Feature checkbox lists in perferences can neither be modified nor be scrolled
- As discussed in #note-8 and #note-9 this is not critical because not unfucntional, but it needs better UI handling to...
- 11:09 AM task #8599: TypeDesignation details pane: clarify function of the remove buttons
- This behaviour is the same all over the application so users get used to it once they have ever deleted something or ...
- 11:01 AM task #8598: Prevent from adding type designations to names with informal ranks
- Not sure if we should implement this.
1. In E+M there were very rare cases of such names with nom. ref. (so there ... - 10:54 AM Revision ebb98af0 (taxeditor): minor
- 10:51 AM Revision 89d6c211 (cdmlib): ref #8458: revert removing of fieldUnitDto list as parameter
10/20/2019
- 12:56 PM feature request #8589: Allow undo of typing actions in the textfields
- We should decide which action to use for undo. To me the most intuitive is "ESC"-key. Any other suggestions?
Also ...
10/18/2019
- 05:59 PM bug #8606 (New): Feature Editor: new term should be focused and named more prominently
- * After adding a new term the term which accidentally is under the cursor is focused, leaving the impression that thi...
- 05:46 PM bug #8605 (Worksforme): ClassCastException in Feature editor when adding new Defined Term
- to reproduce
* Use the database `edit-WS I/caryophyllales_demo_01`
* open feature editor: Window > Terms > Featur... - 03:54 PM bug #8604 (New): Key Editor View: Details for key missing when key is empty
- As long as there are no entries in the key the details view is just blank.
Instead the properties for the key itsel... - 02:57 PM bug #8603 (New): Image Details: image preview not working for some sources
- The image at this URL https://www.seedlingsandcuttings.eu/media/com_hikashop/upload/lymanbensonia_micrantha_flower_16...
- 12:56 PM task #8602: Discuss: Local Preferences & Server-sided Preferences in same menu?
- Hallo Andreas,
am besten besprechen wir das nächste Woche alle zusammen, wenn auch Andreas M. wieder da ist. Da bi... - 12:55 PM task #8602: Discuss: Local Preferences & Server-sided Preferences in same menu?
- Hallo Katja,
in den meisten Fällen orientiert sich der Aufbau vom Menüs an funktionalen Zusammenhängen. Ein so sta... - 12:55 PM task #8602: Discuss: Local Preferences & Server-sided Preferences in same menu?
- Hallo Andreas,
wir haben damals alles, was nur als Admin nutzbar sein soll in das Admin Menü geschoben, eben auch ... - 12:55 PM task #8602 (New): Discuss: Local Preferences & Server-sided Preferences in same menu?
- Hallo,
gibt es einen guten Grund warum die Local Preferences in Window die Server-sided Prefernces in Admin sind?
... - 11:17 AM bug #8586: Feature checkbox lists in perferences can neither be modified nor be scrolled
- Katja Luther wrote:
> Do you select "Use local settings"? Otherwise the checkbox list is disabled.
>
You are r... - 10:56 AM bug #8586: Feature checkbox lists in perferences can neither be modified nor be scrolled
- Do you select "Use local settings"? Otherwise the checkbox list is disabled.
That the list is frozen in a strange...
10/17/2019
- 06:32 PM feature request #8489: Further issues for DB preferences
- I have some more probelms for which I did not find mentioned in here:
Further Problem:
... - 05:25 PM bug #8601 (Feedback): checkbox lists in preferences - button to expand, collapse, ... not functional
- The button row on top of checkbox lists (Available Languages, Features) are not functional:
... - 05:20 PM bug #8586: Feature checkbox lists in perferences can neither be modified nor be scrolled
- I suggest solving this issue quite soon since it blocks from setting up the editor for effective use.
- 02:40 PM Revision fa53f121 (cdmlib): ref #1445: code cleaning - continue
- 02:38 PM Revision 4678a7ed (cdmlib): ref #1445: code cleaning
- 02:02 PM Revision e592fdfe (cdmlib-apps): Merge branch 'master' of ssh://dev.e-taxonomy.eu/var/git/cdmlib-apps
- 02:02 PM Revision c972cf2d (cdmlib-apps): ref #1445: adapt merging activator to changes in cdmlib
- 02:01 PM Revision 43892a41 (cdmlib): ref #1445: improve search for identical names
- 01:30 PM bug #8600 (Resolved): Taxon Navigator: tree no longer scrolls while draging a taxon node
- Applied in changeset commit:taxeditor|8e64a09b23329e2a903eb57a69ab9861bd9acd79.
- 01:07 PM bug #8600 (Closed): Taxon Navigator: tree no longer scrolls while draging a taxon node
- The tree in the Taxon Navigator should automatically scroll when a taxon node is dragged close to the edge of the con...
- 01:29 PM Revision 8e64a09b (taxeditor): fix #8600: enable scrolling for drag & drop
- 12:46 PM Revision 9a17a3b1 (taxeditor): adapt tax editor to changes in longrunning task service
- 12:37 PM task #8599: TypeDesignation details pane: clarify function of the remove buttons
- Katja Luther wrote:
> The most right delete button removes the whole type designation and the other delete button re... - 12:30 PM task #8599: TypeDesignation details pane: clarify function of the remove buttons
- The most right delete button removes the whole type designation and the other delete button removes the specimen from...
- 12:17 PM task #8599 (New): TypeDesignation details pane: clarify function of the remove buttons
- The TypeDesignation details pane offers two identical buttons with the trashcan icon, both show "Remove" when hoverin...
- 12:24 PM Revision 67ce7111 (cdm-dataportal): ref #8595 Show associated specimen on description detail page
- - drupal formatting code
- 12:17 PM Revision 0e2ba0e1 (cdmlib): adapt defaultApplicationContext to moved longRunningService
- 12:09 PM Revision ca82cffd (cdmlib): move longrunningService to service
- 11:52 AM Revision 9d88232c (cdm-dataportal): ref #8595 Fix taxon page TOC
- 11:41 AM bug #8591: Multiple representations problem on setting synonym as basionym
- If you save before drag it as homotypic synonym, it works.
The person which causes the multiple representation excep... - 11:31 AM Revision 4a3669c6 (cdm-dataportal): ref #8596 Only show TOC entry when data available
- 11:20 AM task #8598 (New): Prevent from adding type designations to names with informal ranks
- Adding typedesignations to names with informal ranks (species groups and aggregates) should be supressed, whereas re...
- 10:04 AM Revision 5d7a1103 (cdmlib): Merge branch 'develop' of ssh://dev.e-taxonomy.eu/var/git/cdmlib into develop
- 10:04 AM Revision 99e61c10 (cdmlib): fix app-import cache updater
10/16/2019
- 05:45 PM Revision af9984b8 (cdmlib): ref #8595 Add sources to description init strategy
- 05:38 PM Revision 8b384421 (cdm-dataportal): ref #8595 Show clickable sources on description detail page
- 04:25 PM bug #8597: Name and taxon details: UI counter intuitive regarding cache states
- Ahh, now I understand the problem, it is the TaxonName.titleCache which is still protected.
I completely overlooke... - 03:08 PM bug #8597 (New): Name and taxon details: UI counter intuitive regarding cache states
- It turned out that the originally reported problem was not a technical one but rather caused by the users sightlessne...
- 03:02 PM Revision e170a53e (cdm-dataportal): ref #8595, #8596 Show list of aggr. descriptions on taxon page and link to detail page
- 02:59 PM feature request #8596 (Closed): Add a list of descriptions to the taxon page
- On the general taxon page the descriptions belonging to this taxon should be listed.
They should be separated by t... - 02:58 PM feature request #8595 (Closed): Create description detail page
- Create a description detail page like it already exists for e.g. specimens.
From additivity wiki:
Wir brauchen ... - 09:18 AM bug #8594 (Closed): registration search results page showing: cdm_compose_url(): missing pathParameter 0 for !uri_pattern
- 09:06 AM bug #8594 (Resolved): registration search results page showing: cdm_compose_url(): missing pathParameter 0 for !uri_pattern
- Applied in changeset commit:cdm-dataportal|5213125b3da787f8576f6430dd76ebc87d25a0f2.
- 08:37 AM bug #8594 (Closed): registration search results page showing: cdm_compose_url(): missing pathParameter 0 for !uri_pattern
- A drupal error is displayed on pages where registration dtos are shown:
~~~
cdm_compose_url(): missing pathParame... - 09:06 AM Revision 5213125b (cdm-dataportal): fix #8594 support for Registration, occurrences, events in cdm_base_url(), sanitizing base ulrs in cdm_tagged_text_expand_entity_references() & better problem reporting
- 08:48 AM Revision ec49a23d (cdmlib): ref #8450 Add service method to find default description
10/15/2019
- 05:23 PM bug #8593 (Duplicate): Name editor: wrong context menu for synonyms
- frequently the wrong context menu is shown for synonyms. It looks like the right click is interpreted as right click ...
- 04:24 PM bug #8592 (New): consider renaming menu entry General->Switch User
*Switch User* actually de-connects from the current database and re-displays the connect dialog.
The label *Swi...- 03:26 PM bug #8591 (In Progress): Multiple representations problem on setting synonym as basionym
- * Database: http://ws1.cybertaxonomy.org/caryophyllales_demo_01]
* EDIT Taxonomic Editor, Version: 5.10.0, Build Dat... - 12:44 PM bug #8590 (Duplicate): Details view does not show data of new synonym
- To reproduce:
* Create new Taxon: Lymanbensonia incachacana (Cárdenas) Barthlott & N.Korotkova in Wildenowia 40(2)... - 12:09 PM bug #7143: Finish not enabled when unprotecting titleCache in new Person dialog
- The problem persists, even if a commit exists for this issue.
- 11:58 AM feature request #8589 (New): Allow undo of typing actions in the textfields
- This is a request from the EDIT workshop 2013.
typing actions in the textfields as long as the text field is focus...
10/14/2019
- 03:44 PM bug #8588 (New): function of TaxonNode context menu 'Copy' is unclear
- The Copy menu item is places directly after *Delete*. *Delete* removes the taxon node instance but *Copy* does not co...
- 03:30 PM Revision 9cfe15fd (taxeditor): ref #8450 Fix config labels for default matrix values
- 11:23 AM Revision 6ca34ebe (taxeditor): ref #8450 Fix imports
- 11:07 AM Revision 6bf3f55e (cdmlib): ref #8450 Store default description wrapper in specimen wrapper
- 11:06 AM Revision 647d3230 (cdmlib): ref #7957 Add (web) service for filtering descriptions by type
- 10:53 AM Revision c85838fb (taxeditor): ref #8450 Set config labels according to default values
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