Activity
From 10/06/2019 to 11/04/2019
11/04/2019
- 10:06 PM Revision 14e5960f (cdmlib): cleanup
- 10:06 PM Revision 0668c27e (cdmlib): better exception handling in MethodMapper
- 04:03 PM Revision 4b428921 (cdm-dataportal): ref #8595 Show count for StateData + only show data when state!=null
- 03:33 PM Revision 879048dd (taxeditor): ref #8642 Change menu oder for tree editors
- 02:02 PM Revision 0b52ae5c (cdmlib): revert changes in abcd import test
- 01:39 PM Revision 064a8014 (taxeditor): ref #8450 Fix initial expansion state when refreshing matrix
- 01:37 PM Revision 2d931a85 (cdmlib): ref #8450 Display StateData.count if present
- 01:22 PM Revision 54c2a6e5 (taxeditor): ref #8572: some more indention for sub preferences
- 01:18 PM Revision 5006c242 (taxeditor): ref #8572: rule considered and code edition enable/disable in preferences
- 12:57 PM Revision 9b17d62b (taxeditor): layout issues in name details view preference
- 12:48 PM Revision 25364108 (taxeditor): ref #8410: add indent to code edition
- 10:48 AM Revision 6e9bf931 (taxeditor): ref #8226: fix show modifier
- 08:47 AM Revision 29b04663 (cdmlib): minor refactoring
11/03/2019
11/01/2019
- 05:25 PM Revision 0d988e0a (cdmlib-apps): ref #8643 adapt PesiExportActivatorFE to current state
- 05:10 PM Revision bb4d8757 (cdmlib-apps): cleanup
- 05:05 PM Revision 446b1e61 (cdmlib): ref #8450 Set "count" when aggregating StateData
- 04:45 PM Revision 882e2c02 (cdm-dataportal): ref #8595 Show aggregation description elements on taxon page
- 03:07 PM Revision caacf65b (taxeditor): adapt TaxEditor Test-H2 to model changes v5.11
- 03:06 PM Revision c6865762 (cdm-vaadin): adapt vaadin Test-H2 to model changes v5.11
- 02:53 PM Revision 43fdbc98 (taxeditor): fix #8642 Add tree editor for rank, NamedArea and PresenceAbsence
- 02:26 PM Revision 5f0a3093 (cdmlib): update H2 test data and model cache
- 02:20 PM Revision 3a1e8815 (cdmlib): cleanup
- 02:10 PM Revision d7c686f4 (cdmlib): ref #8625 add count to StateData to FullCoverageDataGenerator
- 01:28 PM Revision 74b86998 (cdmlib): fix #8466 remove old FeatureTree tables
- 01:27 PM Revision 748cefc1 (cdmlib): cleanup
- 01:26 PM Revision 320e07b6 (cdmlib): fix #8625 add count to StateData
- 12:32 PM Revision 2b8a30e9 (cdmlib): move categorical data up in StateData and cleanup
- 12:11 PM Revision bd074233 (cdmlib): some cleanup for TransmissionEngineDistribution
- 12:10 PM Revision 0ced6c29 (cdmlib): cleanup
10/31/2019
- 03:58 PM Revision 42e926d0 (cdmlib): cleanup
- 03:51 PM Revision 2f18fc04 (cdmlib): cleanup
- 02:29 PM Revision a3314925 (cdmlib): add dummy file to cdmlib-cache/src/test/java to make the folder exist in git-repo
10/30/2019
- 11:38 PM Revision 910fd9d6 (cdmlib-apps): fix #8612 final changes to E+MIpniImport
- 04:33 PM Revision 824f5653 (cdmlib): ref #8450 Fix potential NPE
- 04:30 PM Revision eb4a043b (cdmlib): ref #8450 Recurse through parent taxon nodes for default description
- 03:00 PM Revision a2d32af1 (cdmlib): remove whitespace after title for default references with only title and year
- 02:55 PM Revision 4ebcecf9 (cdmlib-apps): ref #8612 implementation of E+MIpniImport (near ready)
- 02:19 PM Revision c2f6e700 (cdmlib): fix test because dna provider is not set as default anymore
- 02:00 PM Revision cdbfdfb0 (cdmlib): cleanup
- 02:00 PM Revision 52a42c7d (cdmlib): ref #8612 use better generics for findByExample
- 01:49 PM Revision e28238b0 (cdmlib): add test file
- 01:27 PM Revision 0203fed0 (taxeditor): rename cdm instance to database
- 01:18 PM Revision 8a720214 (taxeditor): ref #8631: remove the possibility to search for dna when importing from abcd file
- 01:07 PM Revision 4ef89673 (cdmlib): add test for import abcd with search for available dna
- 01:07 PM Revision a021cb95 (cdmlib): remove default dna source
- 01:05 PM Revision c3d2f6db (cdmlib): change biocase provider to herbar to fix test
- 12:04 PM Revision be76eb89 (taxeditor): use same ABCDImportConfiguratorWizardPage for file import and search
- 10:21 AM Revision 92546b65 (taxeditor): ref #8631: fix ClassCastException for abcd import and NPE in abcd preferences
- 09:54 AM Revision f7717334 (cdmlib): ref #8631: fix errors in abcd import
10/29/2019
- 05:43 PM Revision df69489f (taxeditor): fix login problem
- 01:24 PM Revision 5f0db270 (taxeditor): fix #8582: fix refresh in navigator
- 12:48 PM Revision 788e46eb (taxeditor): ref #7143: enable finish correctly when titlecache is set
- 11:48 AM Revision 9ca58dbb (taxeditor): ref #8584: move appended phrase and publish flag
10/28/2019
- 03:58 PM Revision d02bffd6 (taxeditor): ref #8450 Fix config labels for default matrix values
- 12:19 PM Revision 34a22853 (cdmlib-apps): Merge branch 'master' of ssh://dev.e-taxonomy.eu/var/git/cdmlib-apps
- 11:21 AM Revision 8241040a (cdmlib): Do not show empty brackets if no identifier is present for specimen
10/26/2019
- 08:52 AM Revision d2c54d6f (cdmlib): cleanup
- 08:51 AM Revision f270c866 (cdmlib): normalize getAllXXX methods in ReferenceService
- 08:16 AM Revision 24ff7df5 (cdmlib-apps): cleanup
- 08:15 AM Revision b5f5a43c (cdmlib-apps): ref #8612 first implementation of E+MIpniImport
- 08:11 AM Revision 31502678 (cdmlib): cleanup
- 08:10 AM Revision 5899ca52 (cdmlib): ref #8612 add marker type for epublished references
- 08:10 AM Revision 932e616d (cdmlib): ref #8612 add Now to VerbatimTimePeriod factory methods
- 08:09 AM Revision b04afca3 (cdmlib): ref #8612 add addOriginalSpelling to TaxonName
10/25/2019
10/24/2019
- 01:46 PM Revision b08a856c (cdm-dataportal): typo in doc
- 11:46 AM Revision 073285dc (taxeditor): ref #8613: add missing interfaces
- 11:45 AM Revision e01ad27b (taxeditor): set flag... should not be enabled for classifications
- 11:13 AM Revision c39ae40f (taxeditor): adapt granted authority editor to feature based rights
- 11:06 AM Revision df947da5 (taxeditor): ref #8239: disable details for missing rights
- 10:06 AM Revision 44d90517 (taxeditor): ref #8613: using default reference also when adding new source in distribution editor
10/23/2019
- 10:43 AM Revision 406cc5b9 (cdmlib-apps): remove import TestDatabase
- 09:31 AM Revision 5398839e (cdmlib-apps): Merge branch 'master' of ssh://dev.e-taxonomy.eu/var/git/cdmlib-apps
- 09:30 AM Revision 17d546a5 (cdmlib-apps): ref #1445: smaller changes in activators
- 02:13 AM Revision fae562e5 (cdmlib-apps): update E+M mapping csv file
10/22/2019
- 11:02 PM Revision e9ac7c6f (cdm-dataportal): fix #8610 tagged_text_extract_nomstatus() can handle multiple status
- 04:02 PM Revision 38672714 (cdmlib-apps): ref #8479 add import source to FauEu2CDM/CDM-2-CDM import
- 03:57 PM Revision 2e4f981e (cdmlib-apps): cleanup
- 02:35 PM Revision 618fae65 (taxeditor): move source section to the bottom of typedesignation section
- 01:46 PM Revision 9eaf34b7 (taxeditor): adapt editor to changes in typestatus.isLectotype -> hasDesignationSourcve
- 01:25 PM Revision 4a8d1955 (cdmlib): cleanup
- 01:25 PM Revision 0e32b8d4 (cdmlib): rename isLectotype to hasDesignationSource
- 11:31 AM Revision c6828e67 (taxeditor): fix NoSuchElementException for taxa without nodes - continue
- 11:09 AM Revision ffd20969 (taxeditor): fix NoSuchElementException for taxa without nodes
- 10:42 AM Revision c6315a5d (taxeditor): rename taxonnode wizard to taxonnode dialogue
- 10:41 AM Revision a801b069 (taxeditor): rename taxonnode wizard to taxonnode dialog
10/21/2019
- 02:01 PM Revision 770828ca (cdmlib-apps): cleanup and ref #8587 handle special form as rank for fungi (IF)
- 01:47 PM Revision a0aeb474 (taxeditor): ref #8562: fix allow override handling in admin distribution status
- 10:54 AM Revision ebb98af0 (taxeditor): minor
- 10:51 AM Revision 89d6c211 (cdmlib): ref #8458: revert removing of fieldUnitDto list as parameter
10/17/2019
- 02:40 PM Revision fa53f121 (cdmlib): ref #1445: code cleaning - continue
- 02:38 PM Revision 4678a7ed (cdmlib): ref #1445: code cleaning
- 02:02 PM Revision e592fdfe (cdmlib-apps): Merge branch 'master' of ssh://dev.e-taxonomy.eu/var/git/cdmlib-apps
- 02:02 PM Revision c972cf2d (cdmlib-apps): ref #1445: adapt merging activator to changes in cdmlib
- 02:01 PM Revision 43892a41 (cdmlib): ref #1445: improve search for identical names
- 01:29 PM Revision 8e64a09b (taxeditor): fix #8600: enable scrolling for drag & drop
- 12:46 PM Revision 9a17a3b1 (taxeditor): adapt tax editor to changes in longrunning task service
- 12:24 PM Revision 67ce7111 (cdm-dataportal): ref #8595 Show associated specimen on description detail page
- - drupal formatting code
- 12:17 PM Revision 0e2ba0e1 (cdmlib): adapt defaultApplicationContext to moved longRunningService
- 12:09 PM Revision ca82cffd (cdmlib): move longrunningService to service
- 11:52 AM Revision 9d88232c (cdm-dataportal): ref #8595 Fix taxon page TOC
- 11:31 AM Revision 4a3669c6 (cdm-dataportal): ref #8596 Only show TOC entry when data available
- 10:04 AM Revision 5d7a1103 (cdmlib): Merge branch 'develop' of ssh://dev.e-taxonomy.eu/var/git/cdmlib into develop
- 10:04 AM Revision 99e61c10 (cdmlib): fix app-import cache updater
10/16/2019
- 05:45 PM Revision af9984b8 (cdmlib): ref #8595 Add sources to description init strategy
- 05:38 PM Revision 8b384421 (cdm-dataportal): ref #8595 Show clickable sources on description detail page
- 03:02 PM Revision e170a53e (cdm-dataportal): ref #8595, #8596 Show list of aggr. descriptions on taxon page and link to detail page
- 09:06 AM Revision 5213125b (cdm-dataportal): fix #8594 support for Registration, occurrences, events in cdm_base_url(), sanitizing base ulrs in cdm_tagged_text_expand_entity_references() & better problem reporting
- 08:48 AM Revision ec49a23d (cdmlib): ref #8450 Add service method to find default description
10/14/2019
- 03:30 PM Revision 9cfe15fd (taxeditor): ref #8450 Fix config labels for default matrix values
- 11:23 AM Revision 6ca34ebe (taxeditor): ref #8450 Fix imports
- 11:07 AM Revision 6bf3f55e (cdmlib): ref #8450 Store default description wrapper in specimen wrapper
- 11:06 AM Revision 647d3230 (cdmlib): ref #7957 Add (web) service for filtering descriptions by type
- 10:53 AM Revision c85838fb (taxeditor): ref #8450 Set config labels according to default values
10/13/2019
- 12:58 AM Revision d9ece393 (cdmlib-apps): ref #8587 handle null rank names in PESI export a bit better
- 12:56 AM Revision 1363732b (cdmlib-apps): minor
- 12:55 AM Revision 02bf7c25 (cdmlib-apps): ref #2826 fix IF subspecies import, link to genus if species not exists
- 12:53 AM Revision b313991f (cdmlib-apps): adapt some classes to new CommonService.getSourcedObjectSByIdInSource and cleanup
- 12:51 AM Revision 812d0045 (cdmlib): remove old CommonService.getSourcedObjectSByIdInSource
10/12/2019
- 11:51 PM Revision e0935f63 (cdmlib-apps): adapt some classes to new CommonService.getSourcedObjectSByIdInSourceC and cleanup
- 11:49 PM Revision 3bc8dd61 (cdmlib): add additional method for more specific return type of CommonService.getSourcedObjectSByIdInSource
- 11:04 PM Revision 2d09ccf7 (cdmlib): add more specific return type to CommonService.getSourcedObjectByIdInSource
- 11:02 PM Revision 925afb79 (cdmlib-apps): cleanup
- 05:26 PM Revision a3842bd8 (cdmlib): cleanup
- 12:07 PM Revision 891031f6 (cdmlib): ref #8509, ref #8508 some fixes to E+M PESI export and validation
- 12:06 PM Revision d9f92b40 (cdmlib-apps): ref #8509, ref #8508 some fixes to E+M PESI export and validation
- 12:05 PM Revision 1f9eb0e0 (cdmlib-apps): ref #8509 fix trailing whitespace for reference titleCaches
- 12:01 PM Revision 506f2414 (cdmlib-apps): ref #8577 cleanup E+M PESI validation
- 11:59 AM Revision 8e00239d (cdmlib-apps): ref #8587 adapt IF exporter
- 11:22 AM Revision ffd6058e (cdmlib-apps): ref #2826 cleanup IF import
10/11/2019
- 02:19 PM Revision 8543d48b (cdmlib-apps): cleanup
- 02:19 PM Revision b639d1f2 (cdmlib-apps): ref #8577 updates to the E+M PESI export validation
- 02:19 PM Revision a2a0c1de (cdmlib-apps): ref #2717 some fixes E+M Pesi export
- 02:19 PM Revision f53e8dce (cdmlib-apps): reef #2717 add notNull handling to description export
- 01:48 PM Revision 869b76f8 (cdmlib): ref #2717 improve SimpleFilterMapper to use allowed and not allowed values
- 01:46 PM Revision 580e88c9 (cdmlib): ref #2717 fix notNull handling in ObjectMapper
- 01:45 PM Revision c0a697ab (cdmlib): ref #2717 improve ExportIgnore and NotYetImplemented and NullMapper
- 01:44 PM Revision da9caa6c (cdmlib): fix annotation mapper includedTypes handling
- 01:44 PM Revision 62262304 (cdmlib): cleanup
- 11:39 AM Revision 10dd6a16 (taxeditor): fix #8581: renaming taxon navigator
10/10/2019
- 12:01 PM Revision 972ff1cf (cdmlib): fix incorrect obligatory handling in DoiMapper and TimePeriodMapper
- 12:00 PM Revision faa0db48 (cdmlib): ref #2717 allow notNull for SingleAttribute mappers (needed for required fields in PESI)
- 11:58 AM Revision 15cfae05 (cdmlib): ref #2717 fix incorrect error handling in CollectionExportMapping, only throw exception for single record, not all records
- 11:56 AM Revision 66925277 (cdmlib): fix incorrect defaultValue handling in BooleanMapper factory method
- 11:55 AM Revision 23720f5f (cdmlib): cleanup
- 10:57 AM Revision e0a12099 (cdmlib-apps): Merge branch 'master' of ssh://dev.e-taxonomy.eu/var/git/cdmlib-apps
- 10:56 AM Revision 3f87d726 (cdmlib-apps): fix compile errors in app-import
- 10:11 AM Revision af221f0d (cdmlib-apps): commented 2 lines to make edaphobase compile
- 09:47 AM Revision dd919d85 (cdmlib-apps): reef #2717 better handling of status undefined
- 09:47 AM Revision 9d857396 (cdmlib-apps): ref #2717 add Valencian, High Aragonese, Majorcan and Faroer to PESI Export
- 09:47 AM Revision 8d5e5e53 (cdmlib-apps): cleanup
- 09:47 AM Revision b9dcae47 (cdmlib-apps): cleanup
- 09:32 AM Revision bf7e9675 (cdmlib-apps): Merge branch 'master' of ssh://dev.e-taxonomy.eu/var/git/cdmlib-apps
- 09:31 AM Revision ff5db610 (cdmlib-apps): ref #1445: merging fauna europaea and erms
10/09/2019
- 09:05 PM Revision 855ea64a (cdmlib-apps): ref #1444, ref #8509 add defined vocabulary to ERMS areas
- 09:04 PM Revision 81bc4733 (cdmlib-apps): ref #2717 add EM common name area handling to PesiTransformer
- 09:01 PM Revision e2fb06b3 (cdmlib): cleanup
- 09:00 PM Revision 9801bfb4 (cdmlib): ref #2717 add EM common name area UUIDs to BerlinModelTransformer
- 02:49 PM Revision 4b6dc990 (taxeditor): Remove unused class variable
- 02:49 PM Revision e9958b2a (taxeditor): ref #8450 Expand matrix rows only to taxon level
- 01:08 PM Revision 0c308148 (cdmlib): cleanup
- 11:25 AM Revision 5afad693 (cdmlib-apps): # 2717 fix NPE in finding areas (still needs to be tested by ERMS import)
- 11:24 AM Revision 99414418 (cdmlib-apps): # 2717 better logging for E+M distribution status "undefined"
- 11:23 AM Revision 9fe94bfe (cdmlib-apps): # 2717 improve handling of name types which do not exist as taxa (in the area)
- 11:22 AM Revision ab4a17f5 (cdmlib-apps): # 2717 fix finding kingdom for valueless EM taxa
- 11:19 AM Revision b643bc02 (cdmlib-apps): ref #8577 some changes to E+M export validation
- 11:16 AM Revision 6f79628c (cdmlib-apps): # 2717 cleanup and better logging for PesiExport
- 11:05 AM Revision fb82651c (cdmlib): #8577 fix handling of long values in getUniqueInteger
- 11:05 AM Revision 5d0804d6 (cdmlib): cleanup
- 10:40 AM Revision 3f5bef06 (cdmlib): ref #1445: fix helper methods for pesi merging
10/08/2019
- 11:30 PM Revision 01bc5fe1 (cdmlib-apps): ref #8508 some refactoring for ERMS validation
- 11:29 PM Revision 55da90fc (cdmlib-apps): ref #1444 trim displayname for ERMS import
- 11:28 PM Revision 2e058f2b (cdmlib-apps): # 2717 add PesiEuroMedValidator
- 11:28 PM Revision 67426b79 (cdmlib-apps): ref #2717 adapt PesiExport to EuroMed requirements and adapt PesiExportActivatorEM
- 11:23 PM Revision 803707ee (cdmlib-apps): GreeceImageActivator latest import file
- 11:22 PM Revision 2f628c0c (cdmlib-apps): cleanup
- 10:54 PM Revision e5c18a95 (cdmlib): fix default schema validation for ImportConfiguratorBase
- 10:54 PM Revision e0f9407f (cdmlib): cleanup
- 10:54 PM Revision 73eeeb34 (cdmlib): ref #1444 add diffIndex method to CdmUtils
- 10:21 PM Revision d346bae9 (cdmlib-apps): ref #2717 script for adding E+M source to all E+M taxa
- 12:23 PM Revision 87820880 (cdmlib): smaller changes in CdmLightExport (syn sec and fullAuthor in references)
10/07/2019
- 09:24 PM Revision 58cd368c (cdmlib-apps): ref #8509 use kingdomId to define rank for PESI export
- 09:23 PM Revision 22e0d6ae (cdmlib-apps): ref #8509 use EnumSet instead of BitSet for source definition
- 09:21 PM Revision 39d481af (cdmlib-apps): cleanup
- 08:48 PM Revision 787b3ec2 (cdmlib-apps): ref #8509 cleanup rank handling in PesiTranformer
- 08:46 PM Revision 0b1be0da (cdmlib-apps): ref #1444, ref #8508 move diffIndex method to CdmUtils
- 01:55 AM Revision 65866505 (taxeditor): fix compile error
- 12:51 AM Revision b8fc4ee4 (cdmlib): ref #1444, ref #8509 adapt IncludedInMapper and TaxonRelationshipType uuid access to ERMS needs
- 12:49 AM Revision 57fc748f (cdmlib-apps): ref #8508 adapt ERMS pipeline validator to taxon relationships
- 12:49 AM Revision 54a3d685 (cdmlib-apps): cleanup
- 12:48 AM Revision 41cf69c5 (cdmlib-apps): ref #1444, ref #5809 fix taxon relationships in ERMS import and export
- 12:43 AM Revision aa44c220 (cdmlib-apps): ref #1444 improve logging and case sensitive handling for synonym relationship type
- 12:42 AM Revision 75f6d666 (cdmlib-apps): ref #8509 add included taxon relationship export to PESI
- 12:39 AM Revision d87e224c (cdmlib-apps): ref #5809 change partition size for source export
10/06/2019
- 03:03 PM Revision c1ff510c (taxeditor): cleanup
- 10:04 AM Revision 9afc9463 (cdmlib-apps): ref #8508 add TODO to validation
- 10:03 AM Revision 664255b8 (cdmlib-apps): ref #8508 add nomstatus, name rel and taxon rel validation
- 10:00 AM Revision 2b21e6b8 (cdmlib-apps): ref #8508 add Monera to ERMS validation again
- 09:58 AM Revision 7599c655 (cdmlib-apps): ref #1444 revert order of nomstatus to make it similar to SQL script
- 09:57 AM Revision 60d45927 (cdmlib-apps): cleanup
- 09:56 AM Revision 1bbfa4c0 (cdmlib-apps): ref #1444 fix included in and synonym relationship handling for ERMS import (1 rel per taxon)
- 09:53 AM Revision a39ba704 (cdmlib-apps): ref #1444 implement ERMS getSynonymRelationTypesByKey
- 09:52 AM Revision 6dbf7ff0 (cdmlib-apps): ref #1444 make ERMS getNomenclaturalStatusByKey case insensitiv
- 09:48 AM Revision 397a8033 (cdmlib-apps): ref #1444, ref #8508, ref #8509 move synonymTaxonRelationshiptype uuid to TaxonRelationship class
- 09:46 AM Revision b607fa1a (cdmlib-apps): ref #8509 handle doubtful NomenclaturalStatusType.COMB_NOV() to PESI export
- 09:44 AM Revision 7dcac868 (cdmlib-apps): ref #8509 add missing misapplied name and pro parte synonym relations to PESI export
- 09:42 AM Revision 0049964a (cdmlib-apps): cleanup
- 09:38 AM Revision 5ee6ca0b (cdmlib-apps): minor for Greece import
- 09:37 AM Revision 1a278727 (cdmlib): ref #1444 make getTaxonRelationshipType public in importers to make it usable in mappers
- 09:37 AM Revision 63c18ef5 (cdmlib): ref #1444 handle no language as unknown language for imported new nomenclatural status
- 09:37 AM Revision 8588c491 (cdmlib): ref #1444, ref #8509 move ERMS synonym taxon relationship uuids to TaxonRelationship class
- 09:37 AM Revision 0578d459 (cdmlib): ref #1444 adapt DbImportSynonymMapper to ERMS requirements
- 09:37 AM Revision 52c1c6a3 (cdmlib): ref #1444 add getSynonymRelationTypesByKey to IInputTransformer
- 09:37 AM Revision 95c828bc (cdmlib): ref #8509 fix NPE in getAnnotations(by type-uuid)
- 09:37 AM Revision f1319b4b (cdmlib): reduce log level for non latin nom status representations
- 09:36 AM Revision 74336004 (cdmlib): cleanup
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