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From 09/11/2019 to 10/10/2019

10/10/2019

08:23 PM feature request #8583: Change Longitude Latitude to Latitude Longitude in Vaadin Geo location
![](picture231-1.png) Wolf-Henning Kusber
08:22 PM feature request #8583 (New): Change Longitude Latitude to Latitude Longitude in Vaadin Geo location
Type Specimen Editor:
Change Longitude/Latitude to Latitude/Longitude in Vaadin Geo location.
Reason: In publicat...
Wolf-Henning Kusber
05:49 PM bug #8582 (Closed): Taxon Navigator: Classification label not refreshed & new taxa not visible
1. The Classification label is not refreshed in the Taxon Navigator after changing it in the "Classification Wizzard... Andreas Kohlbecker
05:42 PM bug #5670: refresh of Taxon Navigator
I think this ticket needs more details.
Refresh of what? General refresh of all nodes and the classifications?
Andreas Kohlbecker
05:19 PM bug #8545: Name editor: Erroneous status in Status type cannot be made withdrawn
Reason: a valid name (Botany) has no status information, wheras nom. val. is explicitly a zoological status with diff... Wolf-Henning Kusber
05:12 PM bug #8581: Naming inconsitency: Taxon Navigator or Taxonomic Tree?
Can you check when (and why, in which context) it was changed. I can't remember that we decided to rename it.
To m...
Andreas Müller
04:28 PM bug #8581 (Closed): Naming inconsitency: Taxon Navigator or Taxonomic Tree?
The View is named like "Taxonomic Tree" but the menu entry is Window->Show View->"Taxon Navigator"
In the manual "...
Andreas Kohlbecker
03:06 PM EDIT Platform Etablierung task #8580 (In Progress): Update documentation to latest revision of the Taxeditor
Andreas Kohlbecker
03:06 PM EDIT Platform Etablierung task #8580 (In Progress): Update documentation to latest revision of the Taxeditor

Documents to check:
* Manual-EDIT-Platform-01-INSTALL.docx **DONE**
* Manual-EDIT-Platform-02-DEMO.docx
* Manu...
Andreas Kohlbecker
02:58 PM bug #8443: a user with only rights on a subtree can edit taxa and names of another subtree
Andreas Müller wrote:
> is this only an UI issue or is it also a cdmlib-security issue?
I think this is also a cd...
Katja Luther
12:01 PM Revision 972ff1cf (cdmlib): fix incorrect obligatory handling in DoiMapper and TimePeriodMapper
Andreas Müller
12:00 PM Revision faa0db48 (cdmlib): ref #2717 allow notNull for SingleAttribute mappers (needed for requi...
Andreas Müller
11:58 AM Revision 15cfae05 (cdmlib): ref #2717 fix incorrect error handling in CollectionExportMapping, on...
Andreas Müller
11:56 AM Revision 66925277 (cdmlib): fix incorrect defaultValue handling in BooleanMapper factory method
Andreas Müller
11:55 AM Revision 23720f5f (cdmlib): cleanup
Andreas Müller
10:57 AM Revision e0a12099 (cdmlib-apps): Merge branch 'master' of ssh://dev.e-taxonomy.eu/var/git/cdmlib-...
Katja Luther
10:56 AM Revision 3f87d726 (cdmlib-apps): fix compile errors in app-import
Katja Luther
10:11 AM Revision af221f0d (cdmlib-apps): commented 2 lines to make edaphobase compile
Andreas Müller
09:47 AM Revision dd919d85 (cdmlib-apps): reef #2717 better handling of status undefined
Andreas Müller
09:47 AM Revision 9d857396 (cdmlib-apps): ref #2717 add Valencian, High Aragonese, Majorcan and Faroer to ...
Andreas Müller
09:47 AM Revision 8d5e5e53 (cdmlib-apps): cleanup
Andreas Müller
09:47 AM Revision b9dcae47 (cdmlib-apps): cleanup
Andreas Müller
09:32 AM Revision bf7e9675 (cdmlib-apps): Merge branch 'master' of ssh://dev.e-taxonomy.eu/var/git/cdmlib-...
Katja Luther
09:31 AM Revision ff5db610 (cdmlib-apps): ref #1445: merging fauna europaea and erms
Katja Luther

10/09/2019

09:22 PM bug #8579: Search in PhycoBank Portal with error
Search for scientific name Planothidium: 34x error Wolf-Henning Kusber
07:18 PM bug #8579 (Worksforme): Search in PhycoBank Portal with error
Search for Publication "Wetzel". Search is working but errors are displayed.
![](picture035-1.png)
Wolf-Henning Kusber
09:05 PM Revision 855ea64a (cdmlib-apps): ref #1444, ref #8509 add defined vocabulary to ERMS areas
Andreas Müller
09:04 PM Revision 81bc4733 (cdmlib-apps): ref #2717 add EM common name area handling to PesiTransformer
Andreas Müller
09:01 PM Revision e2fb06b3 (cdmlib): cleanup
Andreas Müller
09:00 PM Revision 9801bfb4 (cdmlib): ref #2717 add EM common name area UUIDs to BerlinModelTransformer
Andreas Müller
05:04 PM EDIT Platform Etablierung task #8578 (Closed): Discuss and find appropriate terms for major editor parts (window, view, edi...
In the Taxeditor documentation the term 'window' is being used as simple and common term to refer to the various top ... Andreas Kohlbecker
02:49 PM Revision 4b6dc990 (taxeditor): Remove unused class variable
Patrick Plitzner
02:49 PM Revision e9958b2a (taxeditor): ref #8450 Expand matrix rows only to taxon level
Patrick Plitzner
01:08 PM Revision 0c308148 (cdmlib): cleanup
Andreas Müller
11:25 AM Revision 5afad693 (cdmlib-apps): # 2717 fix NPE in finding areas (still needs to be tested by ERM...
Andreas Müller
11:24 AM Revision 99414418 (cdmlib-apps): # 2717 better logging for E+M distribution status "undefined"
Andreas Müller
11:23 AM Revision 9fe94bfe (cdmlib-apps): # 2717 improve handling of name types which do not exist as taxa...
Andreas Müller
11:22 AM Revision ab4a17f5 (cdmlib-apps): # 2717 fix finding kingdom for valueless EM taxa
Andreas Müller
11:19 AM Revision b643bc02 (cdmlib-apps): ref #8577 some changes to E+M export validation
Andreas Müller
11:16 AM Revision 6f79628c (cdmlib-apps): # 2717 cleanup and better logging for PesiExport
Andreas Müller
11:05 AM Revision fb82651c (cdmlib): #8577 fix handling of long values in getUniqueInteger
Andreas Müller
11:05 AM Revision 5d0804d6 (cdmlib): cleanup
Andreas Müller
11:03 AM task #8577 (In Progress): [PESI][E+M] Validation for E+M export
Implement validation for E+M export to PESI warehouse
Maybe duplicated by #2792
Andreas Müller
10:40 AM Revision 3f5bef06 (cdmlib): ref #1445: fix helper methods for pesi merging
Katja Luther

10/08/2019

11:30 PM Revision 01bc5fe1 (cdmlib-apps): ref #8508 some refactoring for ERMS validation
Andreas Müller
11:29 PM Revision 55da90fc (cdmlib-apps): ref #1444 trim displayname for ERMS import
Andreas Müller
11:28 PM Revision 2e058f2b (cdmlib-apps): # 2717 add PesiEuroMedValidator
Andreas Müller
11:28 PM Revision 67426b79 (cdmlib-apps): ref #2717 adapt PesiExport to EuroMed requirements and adapt Pes...
Andreas Müller
11:23 PM Revision 803707ee (cdmlib-apps): GreeceImageActivator latest import file
Andreas Müller
11:22 PM Revision 2f628c0c (cdmlib-apps): cleanup
Andreas Müller
10:54 PM Revision e5c18a95 (cdmlib): fix default schema validation for ImportConfiguratorBase
Andreas Müller
10:54 PM Revision e0f9407f (cdmlib): cleanup
Andreas Müller
10:54 PM Revision 73eeeb34 (cdmlib): ref #1444 add diffIndex method to CdmUtils
Andreas Müller
10:21 PM Revision d346bae9 (cdmlib-apps): ref #2717 script for adding E+M source to all E+M taxa
Andreas Müller
12:23 PM Revision 87820880 (cdmlib): smaller changes in CdmLightExport (syn sec and fullAuthor in references)
Katja Luther
10:22 AM task #8576 (New): [PESI][DW] Dokumentation for PESI export
This ticket documents how to run a complete PESI export. Later the content will be moved to a Wiki page.
* Ask fo...
Andreas Müller

10/07/2019

09:24 PM Revision 58cd368c (cdmlib-apps): ref #8509 use kingdomId to define rank for PESI export
Andreas Müller
09:23 PM Revision 22e0d6ae (cdmlib-apps): ref #8509 use EnumSet instead of BitSet for source definition
Andreas Müller
09:21 PM Revision 39d481af (cdmlib-apps): cleanup
Andreas Müller
08:48 PM Revision 787b3ec2 (cdmlib-apps): ref #8509 cleanup rank handling in PesiTranformer
Andreas Müller
08:46 PM Revision 0b1be0da (cdmlib-apps): ref #1444, ref #8508 move diffIndex method to CdmUtils
Andreas Müller
05:57 PM EDIT Platform Etablierung task #8555 (In Progress): Evaluate document format and management for the documentation
Andreas Kohlbecker

10/06/2019

01:55 AM Revision 65866505 (taxeditor): fix compile error
Andreas Müller
12:51 AM Revision b8fc4ee4 (cdmlib): ref #1444, ref #8509 adapt IncludedInMapper and TaxonRelationshipType...
Andreas Müller
12:49 AM Revision 57fc748f (cdmlib-apps): ref #8508 adapt ERMS pipeline validator to taxon relationships
Andreas Müller
12:49 AM Revision 54a3d685 (cdmlib-apps): cleanup
Andreas Müller
12:48 AM Revision 41cf69c5 (cdmlib-apps): ref #1444, ref #5809 fix taxon relationships in ERMS import and ...
Andreas Müller
12:43 AM Revision aa44c220 (cdmlib-apps): ref #1444 improve logging and case sensitive handling for synony...
Andreas Müller
12:42 AM Revision 75f6d666 (cdmlib-apps): ref #8509 add included taxon relationship export to PESI
Andreas Müller
12:39 AM Revision d87e224c (cdmlib-apps): ref #5809 change partition size for source export
Andreas Müller
03:03 PM Revision c1ff510c (taxeditor): cleanup
Andreas Müller
10:04 AM Revision 9afc9463 (cdmlib-apps): ref #8508 add TODO to validation
Andreas Müller
10:03 AM Revision 664255b8 (cdmlib-apps): ref #8508 add nomstatus, name rel and taxon rel validation
Andreas Müller
10:00 AM Revision 2b21e6b8 (cdmlib-apps): ref #8508 add Monera to ERMS validation again
Andreas Müller
09:58 AM Revision 7599c655 (cdmlib-apps): ref #1444 revert order of nomstatus to make it similar to SQL sc...
Andreas Müller
09:57 AM Revision 60d45927 (cdmlib-apps): cleanup
Andreas Müller
09:56 AM Revision 1bbfa4c0 (cdmlib-apps): ref #1444 fix included in and synonym relationship handling for ...
Andreas Müller
09:53 AM Revision a39ba704 (cdmlib-apps): ref #1444 implement ERMS getSynonymRelationTypesByKey
Andreas Müller
09:52 AM Revision 6dbf7ff0 (cdmlib-apps): ref #1444 make ERMS getNomenclaturalStatusByKey case insensitiv
Andreas Müller
09:48 AM Revision 397a8033 (cdmlib-apps): ref #1444, ref #8508, ref #8509 move synonymTaxonRelationshiptyp...
Andreas Müller
09:46 AM Revision b607fa1a (cdmlib-apps): ref #8509 handle doubtful NomenclaturalStatusType.COMB_NOV() to ...
Andreas Müller
09:44 AM Revision 7dcac868 (cdmlib-apps): ref #8509 add missing misapplied name and pro parte synonym rela...
Andreas Müller
09:42 AM Revision 0049964a (cdmlib-apps): cleanup
Andreas Müller
09:38 AM Revision 5ee6ca0b (cdmlib-apps): minor for Greece import
Andreas Müller
09:37 AM Revision 1a278727 (cdmlib): ref #1444 make getTaxonRelationshipType public in importers to make i...
Andreas Müller
09:37 AM Revision 63c18ef5 (cdmlib): ref #1444 handle no language as unknown language for imported new nom...
Andreas Müller
09:37 AM Revision 8588c491 (cdmlib): ref #1444, ref #8509 move ERMS synonym taxon relationship uuids to Ta...
Andreas Müller
09:37 AM Revision 0578d459 (cdmlib): ref #1444 adapt DbImportSynonymMapper to ERMS requirements
Andreas Müller
09:37 AM Revision 52c1c6a3 (cdmlib): ref #1444 add getSynonymRelationTypesByKey to IInputTransformer
Andreas Müller
09:37 AM Revision 95c828bc (cdmlib): ref #8509 fix NPE in getAnnotations(by type-uuid)
Andreas Müller
09:37 AM Revision f1319b4b (cdmlib): reduce log level for non latin nom status representations
Andreas Müller
09:36 AM Revision 74336004 (cdmlib): cleanup
Andreas Müller

10/04/2019

06:20 PM bug #8575 (New): Specimen details in PhycoBank Portal
Example: http://phycobank.org/102053
PhycoBank Portal output
There are two issues:
(1) The footnot should lead to ...
Wolf-Henning Kusber
06:10 PM task #8574 (New): Übernahme von Namen in PhycoBank
Wenn eine Gattung, um eine neue Art anzulegen oder ein Species Epitheton, um ein neues infraspezifisches Epitheton an... Wolf-Henning Kusber

10/02/2019

02:37 PM task #7976: [PESI][ERMS] Erms taxon import
NO synonyms exist with an accepted taxon again being a synonym of another accepted taxon:
~~~
SELECT acc.id ac...
Andreas Müller
09:12 AM task #7976: [PESI][ERMS] Erms taxon import
ACCEPTED TAXON:
336 taxa have NO accepted taxon (tu_acctaxon IS NULL)
57003 are their own accepted taxon (tu_ac...
Andreas Müller
08:34 AM task #7976: [PESI][ERMS] Erms taxon import
There are 82 tu_status=accepted taxa with unaccept reason: (mail sent)
~~~
SELECT *
FROM tu
WHERE tu_status = 1...
Andreas Müller
10:44 AM Revision d0a4f3d9 (taxeditor): ref #5873: performance issues
Katja Luther

10/01/2019

03:03 PM Revision d3796291 (cdmlib): ref #5873: check for general description editing right
Katja Luther
03:02 PM Revision d48b6aa4 (taxeditor): ref #5873: authentication as parameter for service method
Katja Luther
01:38 PM Revision a4ff8cb0 (cdmlib): revert some changes
Katja Luther
01:33 PM feature request #5873 (In Progress): Implement rights&roles for TaxEditor distribution editor
implemented:
* check in OpenDistributionEditorHandler whether the user has the permission to edit subtree.
* filt...
Katja Luther
01:28 PM Revision e913a037 (cdmlib): ref #5873: filter nodes without permission
Katja Luther
01:20 PM Revision 1503d9ad (taxeditor): ref #5873: check rights for selected subtree for distribution editor
Katja Luther
10:14 AM Revision 9498b2f0 (taxeditor): Use parentDto() service method
Patrick Plitzner

09/30/2019

02:09 PM Revision 077e5556 (taxeditor): ref #8572: minor
Katja Luther
02:04 PM feature request #7457 (Resolved): E+M: Allow filtering for only published in search
Applied in changeset commit:taxeditor|d12fef53934e5bc7a8869160e63f6c2f1a14b52c. Katja Luther
02:04 PM Revision d12fef53 (taxeditor): fix #7457: add filter option for unpublished taxa in taxon search
Katja Luther
01:54 PM bug #8573: Übernahme sec. als syn. sec.
Can you please further define what the concrete problem is. This behavior always existed and is default. Usually syno... Andreas Müller
01:47 PM bug #8533: missing collector and fieldnumber in abcd import
I uploaded the correct tissue sample file and will test again. Patrick Plitzner
01:24 PM bug #8533 (Resolved): missing collector and fieldnumber in abcd import
as the used example was about two different field units I close this ticket. Please make a last review for closing th... Katja Luther
01:22 PM feature request #8572 (Resolved): Rule considered configurable
please review Katja Luther
01:21 PM feature request #8486 (Resolved): Indicating doubtful state in navigator and add set-doubtful to ...
now doubtful is "??", unplaced "?" Katja Luther
01:21 PM Revision 24802dc7 (taxeditor): ref #8486: add symbol to doubtful taxonnode in navigator
Katja Luther
11:52 AM Revision 39af4e55 (cdmlib-apps): ref #1444 remove ErmsGeneralImportValidator from import for now
Andreas Müller
11:49 AM Revision dd9fed99 (cdmlib-apps): ref #8508 latest version of import + export for ERMS activators
Andreas Müller
11:48 AM Revision 8a133607 (cdmlib-apps): ref #1444, ref #8508 add Monera filter handling in ERMS validati...
Andreas Müller
10:32 AM Revision 651cb4bc (cdmlib-apps): ref #1444 improve handling of infra-infra-species and include te...
Andreas Müller
10:29 AM Revision 33337032 (cdmlib-apps): ref #1444, ref #8509, ref #8508 handle NomenclaturalStatusType i...
Andreas Müller
10:20 AM Revision bb4404d2 (cdmlib-apps): cleanup
Andreas Müller
10:16 AM Revision 6e51084a (cdmlib): ref #1444 allow to create new NomenclaturalStatusTypes during import
Andreas Müller
10:15 AM Revision f0327d32 (cdmlib): cleanup
Andreas Müller
09:59 AM Revision c219c816 (taxeditor): fix NPE in NameDetailsView Preference processing
Katja Luther

09/29/2019

10:23 PM Revision 2cbe08de (cdmlib): cleanup
Andreas Müller
10:22 PM Revision 67ed9b99 (cdmlib): ref #1444 add resetTitleCache method
Andreas Müller
09:54 PM Revision d1dec4a7 (cdmlib): ref #1444 adapt DbImportMethodMapper for ERMS titleCache testing
Andreas Müller
09:52 PM Revision 2120777b (cdmlib): cleanup
Andreas Müller
08:33 PM Revision 118bc6b8 (cdmlib-apps): ref #8508 latest changes to PesiErmsValidator
Andreas Müller
08:33 PM Revision 93c92edc (cdmlib-apps): ref #8509 minor fix
Andreas Müller
08:32 PM Revision b91853a7 (cdmlib-apps): cleanup PesiTransformer
Andreas Müller
08:32 PM Revision 383b85b1 (cdmlib-apps): ref #8509 fix missing non-default language notes
Andreas Müller
08:30 PM Revision 9bb5ffae (cdmlib-apps): ref #1444, ref #8508, ref #8509 handle truncated reference cache...
Andreas Müller
08:28 PM Revision a1340c69 (cdmlib-apps): ref #1444, ref #8508, ref #8509 handle rank, kingdom and code co...
Andreas Müller
08:25 PM Revision 79276af0 (cdmlib-apps): cleanup
Andreas Müller
08:18 PM Revision effd09f0 (cdmlib): ref #8509 handle non-default language textdata correctly in DbTextDat...
Andreas Müller
08:17 PM Revision 492451b1 (cdmlib): ref #8509 handle truncated titlecaches in DbObjectMapper correctly
Andreas Müller
08:16 PM Revision f19a4363 (cdmlib): cleanup
Andreas Müller
04:26 PM Revision 2e170952 (taxeditor): preliminary comment sectionMap handling in PreferencesUtil
Andreas Müller

09/28/2019

12:33 AM Revision 2c11da48 (cdmlib-apps): ref #8508 latest changes for erms pipeline validation
Andreas Müller
12:33 AM Revision 7990caf9 (cdmlib-apps): ref #1444 trim notes import ERMS
Andreas Müller
12:32 AM Revision de3c38ba (cdmlib-apps): ref #8509 fix link (and ecology) export ERMS
Andreas Müller
12:30 AM Revision 80911706 (cdmlib): ref #8509 dependend IdIncMapper
Andreas Müller
12:29 AM Revision 11263195 (cdmlib): ref #1444 add trim to DbImportMultiLanguageTextMapper
Andreas Müller
12:29 AM Revision ae12a9be (cdmlib): cleanup
Andreas Müller
09:12 PM Revision 81dfc7e2 (cdmlib-apps): ref #8509 add CommonNameSource to doDelete for ERMS export
Andreas Müller
09:11 PM Revision 17655285 (cdmlib-apps): ref #8509 fix ERMS image export to support multiple media
Andreas Müller
09:10 PM Revision 95df0734 (cdmlib-apps): ref #1444 fix sql for link import ERMS
Andreas Müller
09:09 PM Revision 644b2537 (cdmlib-apps): cleanup
Andreas Müller
07:08 PM Revision 440b7828 (cdmlib-apps): ref #8508 latest changes to ERMS validator and activators
Andreas Müller
07:07 PM Revision ddc988ed (cdmlib-apps): ref #1444 fix note for synonyms handling for ERMS import
Andreas Müller
07:06 PM Revision c32ee6d2 (cdmlib-apps): ref #8509 adapt description source handling for ERMS export
Andreas Müller
07:05 PM Revision 73558a3c (cdmlib-apps): ref #1444 fix note source handling in ERMS
Andreas Müller
07:05 PM Revision 6ae21a57 (cdmlib-apps): ref #1444, ref #8508, ref #8509 fix link handling and add ecolo...
Andreas Müller
07:02 PM Revision 7b61057c (cdmlib-apps): ref #1444 fix reference type handling for ERMS
Andreas Müller
07:00 PM Revision 2ae4e7ca (cdmlib-apps): ref #1444, ref #8508, ref #8509 handle taxon.cacheCitation in ERMS
Andreas Müller
06:58 PM Revision 23801854 (cdmlib-apps): cleanup
Andreas Müller
06:46 PM Revision 7e6fc953 (cdmlib-apps): ref #1444, ref #8508, ref #8509 handle SpeciesExpertName in ERMS
Andreas Müller
06:41 PM Revision 5dc4b31d (cdmlib): ref #8509 some helper methods for ERMS export
Andreas Müller
06:40 PM Revision f02afae4 (cdmlib): ref #8509 new factory method for MethodMapper
Andreas Müller
06:40 PM Revision 88f75039 (cdmlib): ref #1444, ref #8509 add some import and export mappers
Andreas Müller
06:39 PM Revision aa30ebde (cdmlib): ref #1444, ref #8509 fix some import and export mappers
Andreas Müller
06:38 PM Revision e6f237b7 (cdmlib): cleanup
Andreas Müller

09/27/2019

09:49 PM bug #8565 (Closed): external links and dois no longer showing up
NK:
ja, das Link Symbol wird angezeigt und die Weiterleitung funktioniert.
Andreas Müller
08:42 PM bug #8573 (New): Übernahme sec. als syn. sec.
Wenn ich im Taxonomic EDITor ein akzeptiertes Taxon in die Synonymie verschiebe, wird (neuerdings?) die sec. ref. des... Wolf-Henning Kusber
05:46 PM Revision 09e2bb85 (cdmlib-apps): adapt classes to changes in DbAnnotationMapper with excluded set
Andreas Müller
05:45 PM Revision 788f4a81 (cdmlib-apps): ref #8509 rename old PESI factual data exports
Andreas Müller
05:43 PM Revision 344f4ac6 (cdmlib-apps): adapt classes to changes in DbAnnotationMapper with excluded set
Andreas Müller
05:39 PM Revision 299bbd45 (cdmlib): ref #1444 refactor DbAnnotationMapper and add included type filtering
Andreas Müller
05:39 PM Revision a98f6dad (cdmlib): ref #1444 use sourceReferenceTitle instead of database name where ava...
Andreas Müller
05:39 PM Revision bd9b07e3 (cdmlib): cleanup
Andreas Müller
02:58 PM feature request #8572 (In Progress): Rule considered configurable
Katja Luther
10:34 AM feature request #8572 (Closed): Rule considered configurable
Rule considered is not needed in all projects, therefore it should be configurable whether it should be shown or not Katja Luther
01:29 PM Revision da5756d8 (taxeditor): ref #8572: code cleaning and rule considered configurable
Katja Luther
01:29 PM Revision 6e2d027c (taxeditor): code cleaning
Katja Luther
12:30 PM Revision bd0e8d04 (taxeditor): Fix for setting the cursor for key statements in detail view
Patrick Plitzner
12:21 PM Revision e52a98ef (taxeditor): Fix potential NPE
Patrick Plitzner
11:22 AM Revision a92dd19c (taxeditor): Fix class cast exception for poltomous key graph view
Patrick Plitzner
11:17 AM Revision a6871bd2 (cdmlib-apps): cleanup
Andreas Müller
10:34 AM feature request #8410 (Resolved): Add nomenclatural code edition to ruleConsidered in TaxEditor
this is implemented now. Configuration is moved to new ticket (#8572). Katja Luther
10:29 AM Revision cc1f8735 (taxeditor): ref #8410: disable code edition combo when rule considered is empty
Katja Luther
09:36 AM Revision 192396cd (cdmlib): ref #8450 minor refactoring
Patrick Plitzner
09:36 AM Revision 4e9c11d6 (cdmlib): ref #8450 Add sample size to quantitative data aggregate
Patrick Plitzner

09/26/2019

04:58 PM bug #8571: PolytomousKeyNode.otherNode not editable in TaxEditor
AM:
Mir ist gerade aufgefallen, dass hinzufügen von „Other Node“ noch nicht funktioniert. Für Cuba bräuchten wir d...
Andreas Müller
04:57 PM bug #8571 (New): PolytomousKeyNode.otherNode not editable in TaxEditor
Andreas Müller
04:19 PM Revision 7d377aab (taxeditor): ref #8410: add nomencl. code edition - continue
Katja Luther
04:16 PM bug #8570: PolytomousKeyNode.otherNode missing in REST service response
done! Andreas Kohlbecker
04:15 PM bug #8570 (Resolved): PolytomousKeyNode.otherNode missing in REST service response
Applied in changeset commit:cdmlib|0d7fac88d9f91c91f5233a858d4d0245e1e25af8. Andreas Kohlbecker
04:14 PM bug #8570 (Closed): PolytomousKeyNode.otherNode missing in REST service response
http://api.cybertaxonomy.org/flora-cuba/polytomousKeyNode/11be28e1-00d6-4368-89d9-16782b7e5ac8.json
lacks the dat...
Andreas Kohlbecker
04:15 PM Revision 0d7fac88 (cdmlib): fix #8570 adding PolytomousKeyNode.otherNode to web service response
Andreas Kohlbecker
04:14 PM Revision ec00e362 (taxeditor): ref #8410: add nomencl. code edition
Katja Luther
04:12 PM Revision 9dd11918 (taxeditor): ref #8568: performance issues for term and voc preference pages
Katja Luther
03:08 PM Revision 7fc77454 (cdmlib): ref #8568: fix findByUuidsAsDto for terms
Katja Luther
03:04 PM Revision 365949cd (cdmlib-apps): ref #8508, ref #8509, ref #1444 implement ERMS ref types
Andreas Müller
01:36 PM Revision d8f3c114 (taxeditor): fix call of removed method getAllRelationships
Katja Luther
01:19 PM feature request #8569 (New): Supplemental data for PolytomousKeyNodes
... are currently not yet available. Click on a row in the tables only shows suppl data for key itself.
The proble...
Andreas Müller
01:07 PM Revision d5f0d955 (cdmlib): Cleanup PolytomousKeyNode and remove deprecated methods
Andreas Müller
01:03 PM Revision c295928b (taxeditor): ref #8568: performance issues for term and voc preference pages
Katja Luther
01:01 PM Revision 22bbda04 (cdmlib): ref #8568: methods to get term and voc dtos by uuid list
Katja Luther
12:59 PM feature request #8568 (Closed): improve performance for term and vocabulary preference pages
the performance for the term and vocabulary preference pages is really slow. We need better service methods to get th... Katja Luther
11:41 AM Revision 9355fbbb (cdmlib): ref #1444 fix ResultSetPartitioner for imports with >1 ID columns
Andreas Müller
11:41 AM Revision 4ad2dc40 (cdmlib): ref #8509 replace deprecated INameService.allRelationships for PESI ...
Andreas Müller
11:41 AM Revision f0a9c28e (cdmlib): ref #8509 Adapt DbAnnotationMapper to work for PESI RelTaxon export
Andreas Müller
11:41 AM Revision 5f4207f3 (cdmlib): cleanup
Andreas Müller
11:40 AM Revision fc3c0b4e (cdmlib-apps): adapt BerlinModelNameRelationExport to new NameService.listNameR...
Andreas Müller
11:39 AM Revision 2cb6ad67 (cdmlib-apps): ref #8508, ref #8509, ref #1444 latest changes to ERMS import an...
Andreas Müller
11:38 AM Revision f08f9f6d (cdmlib-apps): ref #8508, ref #8509, ref #1444 fix source use for ERMS
Andreas Müller
11:37 AM Revision 164fc327 (cdmlib-apps): ref #8508 latest changes to PesiErmsValidator
Andreas Müller
11:37 AM Revision 5a251c5c (cdmlib-apps): ref #8509 fix RelTaxon export for ERMS / PESI
Andreas Müller
11:35 AM Revision 03241a1f (cdmlib-apps): ref #8509 fix missing rank for Biota
Andreas Müller
11:33 AM Revision 03538949 (cdmlib-apps): cleanup
Andreas Müller
11:25 AM Revision d3530340 (cdmlib-apps): ref #8508, ref #8509, ref #1444 add additional taxon source hand...
Andreas Müller
09:48 AM Revision 9ba00ebb (cdmlib): ref #8450 Only clone specimen descriptions once
Patrick Plitzner

09/25/2019

08:59 PM feature request #8226: make modifiers for description elements configurable
why did you remove the target version? On purpose? Andreas Müller
02:06 PM feature request #8226: make modifiers for description elements configurable
please review Katja Luther
02:06 PM feature request #8226 (Resolved): make modifiers for description elements configurable
Applied in changeset commit:taxeditor|e056e66eb1fd2b32b4f2fa71bed1ce0496c6af22. Katja Luther
04:52 PM bug #8567 (Worksforme): registration search results: cdm_compose_url(): missing pathParameter 0 f...
The registration search results page shows errors:
~~~
cdm_compose_url(): missing pathParameter 0 for !uri_patte...
Andreas Kohlbecker
02:05 PM Revision 2b4872ec (taxeditor): correct handling of allowOverride in taxonnode admin preferences
Katja Luther
02:04 PM Revision e056e66e (taxeditor): fix #8226: add new preferences for modifiers
Katja Luther
01:59 PM Revision 6730fa80 (cdmlib): ref #8226: add new preferencePredicate for modifiers
Katja Luther
01:28 PM Revision ae492166 (taxeditor): Combine "feature" and "question" column
Patrick Plitzner
12:12 PM Revision ccd07768 (cdmlib): ref #8450 Speed up loading of categorical state data
Patrick Plitzner
11:48 AM Revision 2de9b87d (taxeditor): Fix "feature" column
Patrick Plitzner

09/24/2019

07:14 PM Revision f2f8c0cc (cdmlib): ignore EuroPlusMedCondensedDistributionComposerTest again. Throws exc...
Andreas Müller
07:08 PM Revision 55ef5e30 (cdmlib): refactoring
pplitzner
04:28 PM Revision 51f36cbb (cdmlib): ref #8450 Only aggregate statistical quantitative data
Patrick Plitzner
03:34 PM Revision f820f667 (cdmlib): ref #8450 Do not show duplicate categorical states in aggregation
Patrick Plitzner
03:34 PM Revision 0bdf5a9c (taxeditor): Add "feature" column to polytomous key node editor
Patrick Plitzner
03:31 PM Revision 33be43d1 (taxeditor): Fix potential NPE
Patrick Plitzner
02:40 PM Revision fa72a2a0 (cdmlib): cleanup KeyStatement and PolytomousKeyNode
Andreas Müller
02:40 PM Revision 416261db (cdmlib): cleanup
Andreas Müller
02:40 PM Revision 9ecae4a9 (cdmlib): unignore EuroPlusMedCondensedDistributionComposerTest
Andreas Müller
11:35 AM Revision 7bb2a528 (taxeditor): Merge branch 'master' into develop
Katja Luther
11:33 AM Revision 21e25285 (taxeditor): fix import
Katja Luther
10:55 AM Revision 420b21d7 (taxeditor): Merge branch 'master' into develop
Katja Luther
10:48 AM Revision 092b48da (taxeditor): fix compile error
Katja Luther

09/23/2019

02:47 PM Revision e8a240c5 (cdmlib): ref #8467 Fix re-save problem when deleting clone sources
Patrick Plitzner
02:39 PM Revision 517899da (taxeditor): Add description types to description detail element
Patrick Plitzner
01:59 PM Revision 91f6c4c6 (cdm-server): Merge branch 'release/5.10.0' into develop
jenkins
01:59 PM Revision 7cdc9603 (cdm-server): jenkins merging release branch into master (strategy: theirs)
jenkins
01:58 PM Revision 77572806 (cdm-server): updating poms for branch'release/5.10.0' with non-snapshot versions
jenkins
01:58 PM Revision 3a20e9fa (cdm-webapp): Merge branch 'release/5.10.0' into develop
jenkins
01:58 PM Revision 6eea7617 (cdm-webapp): jenkins merging release branch into master (strategy: theirs)
jenkins
01:57 PM Revision 1fb06c09 (cdm-webapp): updating poms for branch'release/5.10.0' with non-snapshot versions
jenkins
01:57 PM Revision 8e4d8682 (cdm-webapp): jenkins bumping cdmlib.version and cdm.vaadin.version to 5.10.0
jenkins
01:38 PM Revision 93c5fb44 (cdmlib): Revert "Revert "ref #8467 Save cloned source description for aggregat...
This reverts commit d646ba64ca8adcdfcc04b21e80c9d98da6b6f6f3. Patrick Plitzner
01:31 PM Revision 06da5617 (cdm-vaadin): Merge branch 'release/5.10.0' into develop
jenkins
01:31 PM Revision b44966bc (cdm-vaadin): jenkins merging release branch into master (strategy: theirs)
jenkins
01:27 PM Revision 53bf34b2 (cdm-vaadin): updating poms for branch'release/5.10.0' with non-snapshot versions
jenkins
01:27 PM Revision 32041f6c (cdm-vaadin): jenkins bumping cdmlib.version to 5.10.0
jenkins
01:27 PM Revision 619409dc (taxeditor): Merge branch 'release/5.10.0' into develop
jenkins
01:27 PM Revision 807d4d22 (taxeditor): Merge branch 'release/5.10.0'
jenkins
01:26 PM Revision 7d314a95 (cdm-dataportal): Merge branch 'release/5.10.0' into develop
jenkins
01:26 PM Revision 099d2f35 (cdm-dataportal): updating poms for branch'release/5.10.0' with non-snapshot ve...
jenkins
01:26 PM Revision 854c6849 (cdm-dataportal): release-preparation: production level css
jenkins
01:25 PM Revision 3426fa1f (cdmlib): Updating develop poms back to pre merge state
jenkins
01:25 PM Revision e6b50446 (cdmlib): Merge branch 'master' into develop
jenkins
01:25 PM Revision b088e497 (cdmlib): updating develop poms to master versions to avoid merge conflicts
jenkins
01:25 PM Revision da9461a4 (cdmlib): Merge branch 'release/5.10.0'
jenkins
01:03 PM Revision b7402ebb (cdmlib): updating poms for branch'release/5.10.0' with non-snapshot versions
jenkins
12:57 PM bug #8566 (Rejected): Recursive aggregation for common parent taxon does not work if not in data set
If you aggregate a dataset and the common parent taxon is not part of the data set the aggregation will not performed... Patrick Plitzner
12:31 PM Revision 8f35b694 (cdm-webapp): jenkins bumping cdmlib.version and cdm.vaadin.version to 5.10.0-S...
jenkins
12:31 PM Revision 43ba9e4c (cdm-webapp): updating poms for 5.11.0-SNAPSHOT development
jenkins
12:31 PM Revision 7bbf3808 (cdm-webapp): jenkins bumping cdmlib.version and cdm.vaadin.version to 5.11.0-S...
jenkins
12:31 PM Revision fd9734ef (cdm-server): updating poms for 5.11.0-SNAPSHOT development
jenkins
12:30 PM Revision dddf4caf (cdm-dataportal): updating poms for 5.11.0-SNAPSHOT development
jenkins
12:30 PM Revision 83f6b260 (taxeditor): Updated version in pom / project files to taxeditor version : 5.11...
jenkins
12:30 PM Revision cb1e67fb (taxeditor): Updated version in pom / project files to taxeditor version : 5.10...
jenkins
12:27 PM Revision 0c20eece (cdm-vaadin): jenkins bumping cdmlib.version to 5.10.0-SNAPSHOT
jenkins
12:27 PM Revision ad2d55ee (cdm-vaadin): updating poms for 5.11.0-SNAPSHOT development
jenkins
12:27 PM Revision 16928bc0 (cdm-vaadin): updating poms for 5.10.0 branch with snapshot versions
jenkins
12:27 PM Revision f44bf7da (cdm-vaadin): jenkins bumping cdmlib.version to 5.11.0-SNAPSHOT
jenkins
12:23 PM Revision 06f202a9 (cdmlib): updating poms for 5.11.0-SNAPSHOT development
jenkins
12:13 PM Revision a32f2bd0 (cdmlib): ref #1444 add new ISourceable.add method
Andreas Müller
12:12 PM Revision 3df6d29d (cdmlib): cleanup condensedDistribution classes
Andreas Müller
11:07 AM Revision d646ba64 (cdmlib): Revert "ref #8467 Save cloned source description for aggregation"
This reverts commit 16bda3fbbc8445d98653d209e8fe27f611a99890. Patrick Plitzner
10:21 AM Revision 16bda3fb (cdmlib): ref #8467 Save cloned source description for aggregation
pplitzner
10:16 AM Revision 3161ee3f (cdm-dataportal): fix #8565 switching to fa-external-link-square-alt as fa-exte...
Andreas Kohlbecker
09:46 AM bug #8565: external links and dois no longer showing up
fixed, please review Andreas Kohlbecker
09:44 AM bug #8565 (Resolved): external links and dois no longer showing up
Applied in changeset commit:cdm-dataportal|d337d8518ad929552aed9a5af0aaf5bd2395ac16. Andreas Kohlbecker
09:43 AM bug #8565 (Closed): external links and dois no longer showing up
Example: http://cichorieae.e-taxonomy.net/portal/cdm_dataportal/taxon/79d6b29a-7a73-42b6-a024-2ab35fbd60ff
the ref...
Andreas Kohlbecker
09:45 AM Revision 667f16d4 (cdm-dataportal): proper initialization of block->content array
Andreas Kohlbecker
09:44 AM Revision d337d851 (cdm-dataportal): fix #8565 switching to fa-external-link-alt as fa-external-li...
Andreas Kohlbecker

09/20/2019

05:35 PM bug #8564 (Closed): Link to PlatformDocumentation wiki page
Andreas Kohlbecker
05:34 PM bug #8564 (Resolved): Link to PlatformDocumentation wiki page
Applied in changeset commit:taxeditor|55f947d6422ef6e30616a96c07b9e3ac80081e47. Andreas Kohlbecker
04:31 PM bug #8564 (Closed): Link to PlatformDocumentation wiki page
The taxeditor site page *manual* needs to link to the PlatformDocumentation page
https://cybertaxonomy.eu/taxedi...
Andreas Kohlbecker
05:34 PM Revision 55f947d6 (taxeditor): fix #8564 linking to documentation in the wiki
Andreas Kohlbecker
03:53 PM EDIT Platform Etablierung task #8563 (Closed): Implement process to generate PDFs from the docx files
pdf cretated and published in [[edit:PlatformDocumentation]] Andreas Kohlbecker
03:52 PM EDIT Platform Etablierung task #8563 (Resolved): Implement process to generate PDFs from the docx files
Script attachment:make-pdfs.sh created in `bgbmc2.bgbm.fu-berlin.de:/GRUPPEN/BDI/EDIT-Plattform/_Latest Versions/User... Andreas Kohlbecker
03:49 PM EDIT Platform Etablierung task #8563 (Closed): Implement process to generate PDFs from the docx files
The documentation which is managed in `bgbmc2.bgbm.fu-berlin.de:/GRUPPEN/BDI/EDIT-Plattform/_Latest Versions/User Man... Andreas Kohlbecker
12:08 PM Revision 41806880 (taxeditor): Add Character to "Other" section in term editor
Patrick Plitzner
11:33 AM Revision 581e5401 (taxeditor): ref #8562: add override allowed column to distr. status preference...
Katja Luther
11:14 AM bug #8562 (Feedback): Remaining issues for preference pages
* Menu Labels:
* ~~Multi-Language Support => Application~~
* Available Languages => ~~Multi-Language Sup...
Katja Luther
11:03 AM Revision b9731166 (taxeditor): ref #8489: move taxonnode wizard pref to navigator page
Katja Luther
10:21 AM Revision c82a0bdd (taxeditor): ref #8489: some issues in DistributionStatusPreferences
Katja Luther
09:09 AM EDIT Platform Etablierung task #8561 (New): Evaluation of options for a "one klick" setup in cloud environments

* Installation auf Knopfdruck bei Cloude-Anbietern (Google, AWS, ...)?
* Wie kann das technisch so realisiert werd...
Andreas Kohlbecker
09:08 AM EDIT Platform Etablierung report #8560 (New): Identification of single user problems with the paltform
copied from [[Meeting_2019-09-07]]
* bei der lokalen Platform-Installation
* fehlendes Backup
Andreas Kohlbecker
07:45 AM Revision cdf40074 (taxeditor): Do not show subtypes in term editor
Patrick Plitzner
07:45 AM Revision 91568991 (cdmlib): Add flag to filter subtypes in service method
Patrick Plitzner

09/19/2019

06:31 PM EDIT Platform Etablierung task #8559 (New): Revision of the technical concept for the demosites
from [[Meeting_2019-09-02]]
* "AK entwickelt Konzept für die Demo-Sites und damit den technischen Hintergrund von ...
Andreas Kohlbecker
06:28 PM EDIT Platform Etablierung task #8558 (New): Questionnaire to get user feedback
from [[Meeting_2019-09-02]]
AK entwickelt einen einen Fragenkatalog, anhand desssen Interviews mit Nutzern geführt...
Andreas Kohlbecker
06:25 PM EDIT Platform Etablierung task #8557 (New): reorganization of documentation
Spezialfunktionen von einleitenden Teilen abgrenzen und in Teildokumentationen gliedern. Andreas Kohlbecker
06:24 PM EDIT Platform Etablierung report #8556 (Closed): sifting of existing documentation
Documentation mainly exists at `bgbmc2.bgbm.fu-berlin.de:/GRUPPEN/BDI/EDIT-Plattform/_Latest Versions/User Manual/`
...
Andreas Kohlbecker
05:25 PM EDIT Platform Etablierung task #8555 (In Progress): Evaluate document format and management for the documentation
1. research on suitable document formats
1. documentation within the taxeditor would be preferable (see [[Meeting_20...
Andreas Kohlbecker
04:34 PM Revision 4f8c0d92 (taxeditor): Fix potential NPE
Patrick Plitzner
04:31 PM Revision eeca944f (cdmlib): cleanup
Andreas Müller
04:28 PM bug #8488 (Closed): Characters can not be added to feature trees
Currently it is not possible to select a Character term itself because the vocabulary for that is not accessible from... Patrick Plitzner
03:06 PM bug #8488 (Feedback): Characters can not be added to feature trees
Adding via context menu is possible but not via d&d. To close this ticket we should either implement d&d also or crea... Andreas Müller
04:28 PM feature request #8554 (New): Allow drag&drop from character into FeatureTrees
Currently it is not possible to select a Character term itself because the vocabulary for that is not accessible from... Patrick Plitzner
03:23 PM bug #8329 (Worksforme): Multiple representations exception when adding name relationship with alr...
I also can't reproduce anymore. Andreas Müller
01:54 PM Revision efc4a9f8 (taxeditor): ref #8494: layout issues in abcd import preference page
Katja Luther
01:43 PM Revision ce80191a (taxeditor): ref #7321 fix NPE in PolytomousKeyListLabelProvider (II)
Andreas Müller
01:33 PM bug #8382 (Closed): Local Supplemental Data Source Preferences should reflect the state of admin ...
Works as expected and can be closed Andreas Müller
01:30 PM Revision 5c7792df (cdmlib): ref #8450 Move key generation to long running task
Patrick Plitzner
01:30 PM Revision 8ab41788 (taxeditor): ref #8450 Move key generation to long running task
Patrick Plitzner
01:28 PM bug #8034 (Closed): Recently used references shows all references
works fine Patrick Plitzner
01:16 PM Revision a6381bb2 (cdmlib): fix NPE in abcd import
Katja Luther
12:40 PM Revision 1d03dc2b (cdmlib): minor
Katja Luther
12:27 PM Revision 152b29a9 (cdmlib): ref #8469 fix NoSuchElementException (but issue itself might still ...
Andreas Müller
12:23 PM Revision 2033d56d (cdmlib): add derivedFrom to propertyPath in findFieldUnitDTO
Katja Luther
11:58 AM Revision f74a7b15 (taxeditor): minor
Patrick Plitzner
11:41 AM Revision 9b1e9a85 (cdmlib): ref #8533: minor
Katja Luther
11:27 AM Revision 581bf882 (taxeditor): ref #7321 fix NPE in PolytomousKeyListLabelProvider
Andreas Müller
11:26 AM Revision 2f767512 (cdmlib): removing AdvancedBeanInitializer log level TRACE
Andreas Kohlbecker
10:26 AM bug #8553: progress monitor needs information about running process
Is there a reason why you explicitly mentioned cdmlight in title? I think this information should be available for al... Andreas Müller
09:57 AM bug #8553 (New): progress monitor needs information about running process
long running tasks like the cdmlight export sometimes need a lot of ressources.
To get more informations about why ...
Katja Luther
10:09 AM Revision 301fa63e (cdmlib): ref #8450 Optimize aggregation
- Only aggregate descriptions with character data
- delete all aggregation before new aggregation
Patrick Plitzner
09:55 AM Revision c335a01c (taxeditor): ref #8450 Create and cache label for quantitative data in row wrapper
Patrick Plitzner
09:45 AM bug #8533: missing collector and fieldnumber in abcd import
the imported field unit for B GT 0023581 has collector and fieldNumber see attached file (picture607-1.png) Katja Luther
09:42 AM bug #8533: missing collector and fieldnumber in abcd import
Patrick Plitzner wrote:
> ok, this seems to be a bigger problem.
>
> If you compare your debug output with the tw...
Katja Luther
09:42 AM Revision 7a6a6604 (cdmlib): ref #8450 Create and cache label for quantitative data in row wrapper
Patrick Plitzner

09/18/2019

07:36 PM bug #8329 (Feedback): Multiple representations exception when adding name relationship with alrea...
Andreas Müller
03:55 PM bug #8329 (Closed): Multiple representations exception when adding name relationship with already...
Played aroung on on rem_conf_am with nightly build and could not reprodcue the problem Patrick Plitzner
06:23 PM Revision 4c331cd7 (cdm-dataportal): fixing and improving test assertions
Andreas Kohlbecker
05:56 PM bug #8034 (Resolved): Recently used references shows all references
fix is committed, please review. Katja Luther
05:51 PM bug #8034: Recently used references shows all references
Patrick Plitzner wrote:
> Hmm, now when I already have a reference for the secundum, the selection dialog only shows...
Katja Luther
05:26 PM bug #8034: Recently used references shows all references
Hmm, now when I already have a reference for the secundum, the selection dialog only shows some of the last used refe... Patrick Plitzner
05:11 PM bug #8034: Recently used references shows all references
Katja Luther wrote:
> Did you selected the book in a selection dialog or only in bulk editor? The recently selected ...
Patrick Plitzner
04:53 PM bug #8034: Recently used references shows all references
Did you selected the book in a selection dialog or only in bulk editor? The recently selected references are only for... Katja Luther
03:42 PM bug #8034: Recently used references shows all references
ok, I tested the recently selected references with Article and Journal as InReference which works fine. Nevertheless ... Patrick Plitzner
03:38 PM bug #8034: Recently used references shows all references
Another thing I tested:
1. I imported a specimen via ABCD import which had the generic reference "DNA_Bank"
1. I ...
Patrick Plitzner
03:35 PM bug #8034: Recently used references shows all references
the reference needs to be an article because therefore an inreference type exist Katja Luther
03:33 PM bug #8034 (Feedback): Recently used references shows all references
I am not sure if I tested this correctly. Here is what I did:
1. I selected a Generic reference as secundum for on...
Patrick Plitzner
05:55 PM Revision 25e92728 (taxeditor): ref #8034: fixes for recently selected references
Katja Luther
05:42 PM Revision 3ea88987 (taxeditor): ref #8034: fix handling with recently selected references in s
Katja Luther
05:36 PM Revision 030ddaa9 (taxeditor): ref #8450 Only save edited rows in matrix editor
Patrick Plitzner
05:05 PM bug #8386 (Closed): Disable admin menu when not logged into a DB
works fine Katja Luther
02:17 PM bug #8386 (Resolved): Disable admin menu when not logged into a DB
fixed with commit:taxeditor|c2b34f0b89feff1b91fdb6eaa3434cad9dfa510f Patrick Plitzner
05:04 PM bug #8533: missing collector and fieldnumber in abcd import
ok, this seems to be a bigger problem.
If you compare your debug output with the two files it seems like it has mi...
Patrick Plitzner
04:47 PM bug #8533 (In Progress): missing collector and fieldnumber in abcd import
I think we have to move this to 5.11 Katja Luther
04:46 PM bug #8533: missing collector and fieldnumber in abcd import
Patrick Plitzner wrote:
> Katja Luther wrote:
> > the collector problem is solved, but the fieldnumber is not deliv...
Katja Luther
04:44 PM bug #8533: missing collector and fieldnumber in abcd import
Katja Luther wrote:
> ah there is another problem, the gathering agent for the tissue is Hutchison and for the tissu...
Patrick Plitzner
04:43 PM bug #8533: missing collector and fieldnumber in abcd import
Katja Luther wrote:
> the collector problem is solved, but the fieldnumber is not delivered. I debugged and also loo...
Patrick Plitzner
04:37 PM bug #8533: missing collector and fieldnumber in abcd import
ah there is another problem, the gathering agent for the tissue is Hutchison and for the tissue sample Lautner Katja Luther
04:34 PM bug #8533: missing collector and fieldnumber in abcd import
the collector problem is solved, but the fieldnumber is not delivered. I debugged and also looked at the output and t... Katja Luther
03:20 PM bug #8533 (Feedback): missing collector and fieldnumber in abcd import
I attached the two sample file: one is the DNA unit the other one the associated tissue sample.
I tested on night...
Patrick Plitzner
05:00 PM feature request #8489: Further issues for DB preferences
move to 5.11 for a last review whether all (wanted) preferences are available as db preferences Katja Luther
04:58 PM task #8458 (In Progress): document FieldUnitDTOOccurrenceServiceImpl.findFieldUnitDTO()
Katja Luther
04:56 PM bug #8494 (In Progress): Better ABCD Preferences Page
I move this to 5.11 to solve the layout issues. Katja Luther
02:39 PM bug #8494: Better ABCD Preferences Page
Andreas Müller wrote:
> >This is fixed but still "Restore default" does not completely remove the preference (and ev...
Katja Luther
02:25 PM bug #8494: Better ABCD Preferences Page
>This is fixed but still "Restore default" does not completely remove the preference (and even does not clear the exi... Andreas Müller
02:23 PM bug #8494: Better ABCD Preferences Page
The "New provider" text field should have a label "New provider" or similar. Also the "Add Provider" button should be... Andreas Müller
02:22 PM bug #8494: Better ABCD Preferences Page
Second time it worked but still there was an empty entry in the provider list Andreas Müller
02:20 PM bug #8494: Better ABCD Preferences Page
Trying to create a new provider results in
~~~
login : admin
editor version : 5.10.0.201909180750
server : loc...
Andreas Müller
02:19 PM bug #8494 (Feedback): Better ABCD Preferences Page
is #8385#note-51 already fixed? It is part of **this** ticket description! (copied from)
The field NomenclaturalCo...
Andreas Müller
01:10 PM bug #8494 (Resolved): Better ABCD Preferences Page
The issues above are solved, so I think we can close this ticket. Katja Luther
04:54 PM Revision fde0968c (cdm-dataportal): fixing and improving test assertions
Andreas Kohlbecker
04:54 PM Revision d8de8d4d (cdm-dataportal): fixing order of typedesignations in registration page
Andreas Kohlbecker
04:53 PM task #8456 (Closed): FieldUnitDTO: remove newInstanceMethod
Katja Luther wrote:
> sorry I missed to add the last commit to this ticket.
Yes, I just realized that, too.
co...
Patrick Plitzner
04:51 PM task #8456 (Resolved): FieldUnitDTO: remove newInstanceMethod
Katja Luther
04:50 PM task #8456: FieldUnitDTO: remove newInstanceMethod
sorry I missed to add the last commit to this ticket. Katja Luther
04:41 PM task #8456: FieldUnitDTO: remove newInstanceMethod
Katja Luther wrote:
> Patrick Plitzner wrote:
> > looks fine. Only on question: Why did you remove the null check w...
Katja Luther
04:39 PM task #8456: FieldUnitDTO: remove newInstanceMethod
Katja Luther wrote:
>
> the null check is now in the gatheringEventDto
The parameter `gathering` is not checked...
Patrick Plitzner
04:30 PM task #8456: FieldUnitDTO: remove newInstanceMethod
Patrick Plitzner wrote:
> looks fine. Only on question: Why did you remove the null check when creating the Gatherin...
Katja Luther
04:08 PM task #8456 (Feedback): FieldUnitDTO: remove newInstanceMethod
looks fine. Only on question: Why did you remove the null check when creating the GatheringEvent -> https://dev.e-tax... Patrick Plitzner
04:04 PM feature request #8350 (Closed): Search dialog for named areas should work with abbreviations
tested on nightly. works fine. Patrick Plitzner
03:51 PM feature request #8123 (Closed): Make available features a DB preference
tested on nightly for local and DB prefs. works fine. Patrick Plitzner
03:43 PM task #8130: Check if related feature data is cleared when supported facts type is changed
Move to next milestone for remaining discussion Patrick Plitzner
03:43 PM feature request #8242: Implement filtered combo boxes for state selection in CharacterMatrix
Move to next milestone because this is still considered experimental Patrick Plitzner
03:05 PM bug #7321 (Closed): multi-language textfields should not show empty text when there is text
tested on nightly. works fine Patrick Plitzner
02:42 PM Revision c1bd899f (taxeditor): use last selected abcd provider for import
Katja Luther
02:24 PM feature request #8539 (Closed): Add IndividualsAssociation when adding specimens to the character...
IndividualsAssocations are created when adding specimens which do not yet have one.
Still experimental so no revie...
Patrick Plitzner
02:22 PM feature request #8335 (Closed): Store character matrix table state as DB preference
closing the ticket -> created a new ticket for using the preference cache #8552 Patrick Plitzner
02:22 PM bug #8552 (Closed): Avoid DB call for matrix state DB preferences
Copied from #8335:
looks fine, but if you want to avoid a db call, you can use CdmPreferenceCache.instance().get(P...
Patrick Plitzner
02:19 PM bug #8488 (Resolved): Characters can not be added to feature trees
Patrick Plitzner
02:11 PM Revision 5bceba97 (taxeditor): ref #8494: save last abcd import configurator
Katja Luther
01:46 PM feature request #8469 (In Progress): Open PolytomousKeyGenerator issues
Andreas Müller
01:39 PM bug #8517 (Feedback): SpecimenOrObservation: data from protected titleCache missig in portal pages
This seems to work but handling the protected title cache of the **field** unit in the **derived**unit cachestrategy ... Andreas Müller
01:20 PM Revision 547189fd (taxeditor): ref #8494: abcd config nom. code is set to default nom. code
Katja Luther
01:03 PM Revision 5d616c75 (taxeditor): fix taxon search configurator preference
Katja Luther
12:46 PM Revision 49fbe818 (cdmlib): add ExactValue to possible input for PolytomousKeyGenerator
Andreas Müller
11:43 AM Revision e07260d7 (cdmlib): some cleanup in PolytomousKeyGenerator
Andreas Müller
11:39 AM Revision 430c5895 (taxeditor): fix taxon search configurator preference
Katja Luther
10:49 AM Revision b42c7515 (cdmlib-apps): ref #8509 fix missing IsraeliExclusiveEconomicZone issue
Andreas Müller
10:48 AM Revision c32dfb15 (cdmlib-apps): ref #1444, ref #8508, ref #8509 improve ERMS notes pipeline
Andreas Müller
10:44 AM Revision 23a201e7 (cdmlib-apps): ref #1444, ref #8508, ref #8508 Finish ERMS image import and som...
Andreas Müller
10:41 AM Revision 79c223b6 (cdmlib-apps): cleanup
Andreas Müller
10:37 AM Revision 93243e0f (cdmlib): ref #1444 fix missing status in DistributionCreation for ERMS
Andreas Müller
10:36 AM Revision 2dd7e54d (cdmlib): cleanup
Andreas Müller
09:36 AM Revision 9fb73f2a (taxeditor): minor in l10n
Katja Luther

09/17/2019

05:03 PM Revision 41027fc8 (cdmlib): ref #1444 fix feature creation mapper on setting the feature to the o...
Andreas Müller
05:03 PM Revision db5a2cc2 (cdmlib): cleanup
Andreas Müller
04:41 PM Revision c2f509ab (taxeditor): ref #8450 Use cached display data for matrix cells
pplitzner
04:40 PM Revision 14ce7344 (cdmlib): ref #8450 Cache display data in row wrapper
pplitzner
04:26 PM bug #8382 (Resolved): Local Supplemental Data Source Preferences should reflect the state of admi...
Katja Luther
04:26 PM bug #8382: Local Supplemental Data Source Preferences should reflect the state of admin preferences
this is fixed with #8489 Katja Luther
03:33 PM Revision 64705220 (taxeditor): ref #8329: fix multiple representation exception
Katja Luther
03:33 PM bug #8329 (Resolved): Multiple representations exception when adding name relationship with alrea...
with the last commit, I could not reproduce this problem anymore. please review. Katja Luther
03:23 PM bug #8551 (New): Some preferences should be available without login
Some preferences like the application language should be available even if not logged into a database.
Currently t...
Andreas Müller
02:59 PM bug #7321: multi-language textfields should not show empty text when there is text
this is fixed.
please review.
Katja Luther
02:59 PM bug #7321 (Resolved): multi-language textfields should not show empty text when there is text
Applied in changeset commit:taxeditor|3ac05bdb7abe97395018f3fbd57ed143c1a018d7. Katja Luther
02:59 PM bug #8034: Recently used references shows all references
Applied in changeset commit:taxeditor|44bee70cbd379cac7115a2e9de9fda497fd4894f. Katja Luther
02:17 PM bug #8034 (Resolved): Recently used references shows all references
this is fixed. please review.
For review you should open a reference selection dialog and choose a journal.
In a...
Katja Luther
02:58 PM Revision 3ac05bdb (taxeditor): fix #7321: check whether text of default language is set otherwise...
Katja Luther
02:58 PM Revision 44bee70c (taxeditor): fix #8034: preselected references should have correct type
Katja Luther
02:37 PM bug #7766 (In Progress): Remaining issues for using relationship DTO webservice in portal
The sort order seem to have problems. Is this an regression or has this point be missed? Andreas Kohlbecker
02:37 PM Revision 91408e53 (cdmlib-apps): ref #8509 increase number of taxa for description export partition
Andreas Müller
02:36 PM Revision 405dc768 (cdmlib-apps): ref #1444, ref #8508, ref #8509 some improvements on ERMS taxon...
Andreas Müller
02:35 PM Revision 047b2976 (cdmlib-apps): ref #1444, ref #8508, ref #8509 some improvements on ERMS notes...
Andreas Müller
02:33 PM feature request #8092 (Closed): set default for term and vocabulary selection preferences in sele...
I think this is solved with #8489 Katja Luther
02:32 PM Revision 7487f98f (cdmlib-apps): ref #1444, ref #8508, ref #8509 improve ERMS vernacular name tr...
Andreas Müller
02:30 PM Revision fa27ce80 (cdmlib-apps): ref #1444, ref #8508, ref #8509 improve ERMS distribution pipeline
Andreas Müller
02:29 PM feature request #8335 (Feedback): Store character matrix table state as DB preference
looks fine, but if you want to avoid a db call, you can use CdmPreferenceCache.instance().get(PrefKey key)
instead ...
Katja Luther
02:24 PM Revision 1437e192 (cdmlib-apps): ref #8509 improve isPesi taxon handling for export
Andreas Müller
02:23 PM Revision f8226169 (cdmlib-apps): ref #1444, ref #8508, ref #8509 improve rank handling in ERMS pi...
Andreas Müller
02:19 PM Revision 6535f3fe (cdmlib-apps): ref #8509 latest changes to PesiExportActivatorERMS
Andreas Müller
02:19 PM Revision c3b66cac (cdmlib-apps): ref #1444 latest changes to ErmsImportActivator
Andreas Müller
02:18 PM Revision d7f95f72 (cdmlib-apps): ref #1444, ref #8508, ref #8509 improve rank handling in ERMS pi...
Andreas Müller
02:12 PM Revision e126ec3a (cdmlib): ref #8034: filter last selected references by inReference type
Katja Luther
02:12 PM Revision 6af26c13 (cdmlib): ref #8034: filter last selected references by inReference type
Katja Luther
02:10 PM Revision f953097d (cdmlib-apps): ref #8509 adapt log4j.properties for PESI export
Andreas Müller
02:09 PM Revision 3b2e07f3 (cdmlib-apps): adapt FaueEuErmsMergeActivator to TaxonName.addRelationship changes
Andreas Müller
02:08 PM Revision 668cae43 (cdmlib-apps): ref #1444 adapt ERMS vernacular name import
Andreas Müller
02:07 PM Revision 3c993316 (cdmlib-apps): ref #8509 handle doEmpty tables for PesiDescriptionExport
Andreas Müller
02:05 PM Revision b4ffff96 (cdmlib-apps): adapt FaueEuTaxonNameImport to TaxonName.addRelationship changes
Andreas Müller
02:04 PM Revision a0f9168d (cdmlib-apps): ref #8508 latest changes to ERMS pipeline validation
Andreas Müller
02:03 PM Revision 1491a132 (cdmlib-apps): cleanup
Andreas Müller
02:00 PM Revision 710a5727 (taxeditor): ref #8450 Display full statistical measure label
Patrick Plitzner
01:54 PM Revision d8053698 (cdmlib): ref #8509 reduce logging for multiple sources problem
Andreas Müller
01:54 PM Revision 1adda666 (cdmlib): ref #1444 fix image import mapping
Andreas Müller
01:54 PM Revision 9db13e41 (cdmlib): fix (revert) incorrect signature in DbLanguageMapper
Andreas Müller
01:54 PM Revision 0997cbeb (cdmlib): update Feature mapper to set the feature immediately to the descripti...
Andreas Müller
01:54 PM Revision 865c4dc7 (cdmlib): cleanup
Andreas Müller
12:57 PM Revision c88416e1 (cdm-dataportal): ref #7766 completing test case
Andreas Kohlbecker
12:36 PM bug #8550 (New): taxon concept relationship editor is hard to find
It is hard to find the editor for taxon relationships. The UI gives not hints.
![](picture380-1.png)
This view...
Andreas Kohlbecker
12:34 PM feature request #8350 (Resolved): Search dialog for named areas should work with abbreviations
the search dialog searches for the selected abbreviation when the preference is set (default is the titlecache).
Y...
Katja Luther
12:31 PM task #8458 (Resolved): document FieldUnitDTOOccurrenceServiceImpl.findFieldUnitDTO()
Applied in changeset commit:cdmlib|6b929840715bd88dc66fd3f0cc9abd88530b2487. Katja Luther
12:31 PM Revision 6b929840 (cdmlib): fix #8458: remove unused parameter
Katja Luther
12:25 PM bug #8531: factual data and media view always opened when opening taxon
the editor now remember whether the facts and media view were open before distribution editor was opened and dependin... Katja Luther
12:21 PM task #8425 (Closed): FieldUnitDTO: remove taxonRelatedDerivedUnits
it is removed. Katja Luther
12:19 PM Revision a853ae40 (cdmlib): fix NPE in FieldUnitDto
Katja Luther
12:07 PM Revision 87b9d856 (taxeditor): ref #8489: show local values in local distr status table
Katja Luther
11:33 AM feature request #8409 (Closed): add nomenclatural code select to NameRelationField
Wolf-Henning Kusber wrote:
> works for me as implemented.
>
> Would like to see for all codes ICBN (in capital le...
Andreas Kohlbecker
11:18 AM feature request #8409: add nomenclatural code select to NameRelationField
works for me as implemented.
Would like to see for all codes ICBN (in capital letters) except of 2011, and 2018 = ...
Wolf-Henning Kusber
11:11 AM feature request #8409: add nomenclatural code select to NameRelationField
> Was genau ist mit NameRelationField gemeint? Wir haben so etwas bisher nur bei "Orthographical correction"
Das g...
Andreas Kohlbecker
10:52 AM feature request #8409: add nomenclatural code select to NameRelationField
Rückfrage: bei allen Namen ist die "NomenclaturalStatusRow". Was genau ist mit NameRelationField gemeint? Wir haben s... Wolf-Henning Kusber
11:31 AM task #8456: FieldUnitDTO: remove newInstanceMethod
please review Katja Luther
11:31 AM task #8456 (Resolved): FieldUnitDTO: remove newInstanceMethod
Applied in changeset commit:cdmlib|ed34f59fbc07b3029f7c6f939d2108fc324a7d08. Katja Luther
11:31 AM Revision ed34f59f (cdmlib): fix #8456: remove newInstance methof in FieldUnitDTO
Katja Luther
11:24 AM Revision bd131507 (cdm-dataportal): ref #8134 fixing wrong case in type designation status labels
Andreas Kohlbecker
11:16 AM Revision f186b3b2 (cdmlib): add citation to type statement in cdm light export
Katja Luther
11:15 AM Revision f6bc63b0 (cdm-dataportal): avoiding access to unset variable
Andreas Kohlbecker
11:07 AM bug #8376 (Closed): RegistrationWorkingsetEditor: prevent clicking any futher buttons after the o...
Andreas Kohlbecker
10:01 AM bug #8376: RegistrationWorkingsetEditor: prevent clicking any futher buttons after the openting o...
resolved, ticket can be closed. Wolf-Henning Kusber
11:07 AM bug #8377 (Closed): TypeDesignationsEditors: Delete must not be allowe before the workingset is s...
Andreas Kohlbecker
10:12 AM bug #8377: TypeDesignationsEditors: Delete must not be allowe before the workingset is saved
no problems with name types and specimen types to not save erroneously opened editors or close editors with informati... Wolf-Henning Kusber
11:07 AM bug #8527 (Closed): TaxonNameEdior: 'Validations' and 'Orthographocal corrections' are lost when ...
Andreas Kohlbecker
10:39 AM bug #8527: TaxonNameEdior: 'Validations' and 'Orthographocal corrections' are lost when editor is...
No problems with orthographical corrections. Ticket can be closed. Wolf-Henning Kusber
10:33 AM bug #8527: TaxonNameEdior: 'Validations' and 'Orthographocal corrections' are lost when editor is...
So far no problems with orthographical variants.
No problems with validations. Ex-author teams are shown once the ...
Wolf-Henning Kusber
11:06 AM feature request #8408 (Closed): add nomenclatural code select to NomenclaturalStatusRow
Andreas Kohlbecker
10:49 AM feature request #8408: add nomenclatural code select to NomenclaturalStatusRow
issue resolved, ticket can be closed. Wolf-Henning Kusber
11:06 AM feature request #8342 (Closed): shift field Field number
Andreas Kohlbecker
09:57 AM feature request #8342: shift field Field number
perfect, ticket can be closed. Wolf-Henning Kusber
11:04 AM Revision 9f9135ff (cdm-dataportal): avoiding access to unset variable
Andreas Kohlbecker
11:02 AM feature request #8549 (New): while abcd import problems should be logged more in detail
this is a ticket to collect all that needs to be handled more in detail while abcd import:
problems like different...
Katja Luther
10:59 AM bug #8548 (Closed): ReferenceEditor: Layout problem when opening Reference editor (new journal, n...
Layout when opening Reference editor (new journal, new book, new thesis).
see test system, as of 17 Sept 2019. are...
Wolf-Henning Kusber
10:56 AM bug #8533 (Resolved): missing collector and fieldnumber in abcd import
problems like this should be handled more in detail and the user should be informed about this problems. Therefore I ... Katja Luther
10:49 AM feature request #8123 (Resolved): Make available features a DB preference
Katja Luther
10:44 AM feature request #8123: Make available features a DB preference
Name facts and taxon facts are preferences available as local and db preference, at the moment there is no vocabulary... Katja Luther
10:42 AM bug #8547: Default type of a newly created inReference should depend on the type of the reference
this problem appears only when the newly created in-reference is not of the type journal. Katja Luther
10:18 AM bug #8547 (Resolved): Default type of a newly created inReference should depend on the type of th...
mail from WB:
Hallo,
ich habe ausgehend vom Details view eine neue NomReferenz (Artikel) eingegeben. Dabei musste...
Katja Luther
10:21 AM Revision 8c34de8f (cdmlib): Fix potential NPE
Patrick Plitzner
08:48 AM Revision 0fd965ee (cdm-dataportal): ref #8134 simplifying code
Andreas Kohlbecker
08:40 AM Revision 85ac09e7 (cdm-dataportal): ref #8134 reverting change which caused duplication of annota...
Andreas Kohlbecker
08:27 AM Revision f3baa35e (cdm-dataportal): fixing bug in initialization of feature_block_distribution
Andreas Kohlbecker

09/16/2019

02:48 PM Revision db45a69b (taxeditor): Fix potential NPE
pplitzner
02:35 PM Revision f8fa200d (taxeditor): ref #8489: code cleaning
Katja Luther
01:59 PM feature request #8489 (In Progress): Further issues for DB preferences
Katja Luther
01:58 PM Revision 6fd0ac3c (taxeditor): ref #8489: improve table on dist status preference page
Katja Luther
01:29 PM Revision 12c30592 (cdmlib): ref #8450 Fix potential mysql syntax exception
Patrick Plitzner
12:45 PM Revision b2a4dcd5 (cdmlib-apps): adapt app-import to changes in taxonName.addRelationship
Andreas Müller
12:41 PM Revision 0813a168 (taxeditor): fix potential NPE in NameDescriptionFilter
Andreas Müller
12:36 PM Revision 9557c1a9 (taxeditor): fix potential NPE in NameDescriptionFilter
Andreas Müller
12:25 PM Revision 29d0296e (taxeditor): fix potential NPE in NameDescriptionFilter
Andreas Müller
12:03 PM task #8546 (New): type specimen editor: published in vs. designated by
Normally the bibliographical authors are also nomenclatural authors who designate types, so far no problem.
If a tre...
Wolf-Henning Kusber
11:19 AM bug #8545 (New): Name editor: Erroneous status in Status type cannot be made withdrawn
Example: Navicula tenuis F.Meister was erroneously set as "illegitimate"
It was not possible to make this reversible...
Wolf-Henning Kusber
10:33 AM Revision 19b5c3ee (cdmlib): Revert "Use only aggregated taxon descriptions for key generation"
This reverts commit d6567bcdd0ad9fc7768b7ab85be7f09386c05c6b. Patrick Plitzner
10:10 AM bug #8494: Better ABCD Preferences Page
now the Unit ID mapping is a combo box and the dna provider is a combo box containing the providers defined in the pr... Katja Luther
09:34 AM Revision d2389430 (cdmlib): ref #8450 Load supported categorical states in service layer
pplitzner
09:32 AM Revision 1d424e89 (taxeditor): ref #8450 Load supported categorical states in service layer
pplitzner
09:14 AM Revision 7b1740fe (cdmlib): ref #8489: PreferencePredicate update
Katja Luther
08:46 AM Revision d9a1b833 (cdmlib): ref #8450 Delete association taxon description when deleting specimen
pplitzner
06:46 AM Revision 34c65e31 (taxeditor): Set taxonomic scope for generated polytomous key
pplitzner
06:46 AM Revision 40f360dd (taxeditor): ref #8539 Update local data set after aggregation
pplitzner
06:46 AM Revision ddb0eef3 (taxeditor): ref #8539 Add specimens to matrix as long running task
pplitzner
06:46 AM Revision c0ad6a65 (taxeditor): Fix potential NPE
pplitzner
06:46 AM Revision c1bf973e (taxeditor): ref #8539 Update local data set after adding specimen
pplitzner
06:46 AM Revision 656fdfa3 (taxeditor): Fix potential NPE
pplitzner
06:45 AM Revision 92044c86 (cdmlib): Add missing classes to PermissonClass
pplitzner
06:45 AM Revision ef0587b0 (cdmlib): ref #8539 Set data set for aggregation
pplitzner
06:45 AM Revision c67a9006 (cdmlib): Fix potential NPE
pplitzner
06:45 AM Revision bbd7e287 (cdmlib): ref #8539 Add specimens to matrix as long running task
pplitzner
06:45 AM Revision d6567bcd (cdmlib): Use only aggregated taxon descriptions for key generation
pplitzner

09/13/2019

02:10 PM Revision 85c6cfb6 (taxeditor): ref #8488: adapt all term related preferences, abcd preference page
Katja Luther
11:22 AM Revision c9ac7f0d (taxeditor): ref #8489: adapt commonname named area voc selection to other voc ...
Katja Luther
11:07 AM Revision e7cdc2fb (taxeditor): ref #8385: better handling of distr preferences and term related p...
Katja Luther
11:04 AM Revision e1be2e3b (taxeditor): code cleaning
Katja Luther
11:02 AM Revision b6ea6bbc (cdmlib): ref #8385: methods for better voc selection pref pages
Katja Luther
10:03 AM Revision 1805001b (taxeditor): adaptions to changes in PreferencesUtil
Katja Luther

09/12/2019

02:26 PM Revision bf26c791 (taxeditor): Fix potential NPE
Patrick Plitzner
02:26 PM Revision e87ad53b (taxeditor): Disabling aggregation charts
Patrick Plitzner
02:26 PM Revision 0e1a7631 (taxeditor): ref #8539 Add association taxon description to descriptive data set
Patrick Plitzner
02:26 PM Revision d19ffefd (taxeditor): ref #8539 Performance and session handling fixes
Patrick Plitzner
02:26 PM Revision ff159227 (cdmlib): ref #8539 Performance and session handling fixes
Patrick Plitzner
02:26 PM Revision 47def0a1 (cdmlib): ref #8539 Filter aggregated, literature or default descriptions
Patrick Plitzner
02:26 PM Revision 47c3158d (cdmlib): ref #8539 Add taxon description to wrapper
Patrick Plitzner
01:54 PM Revision 7915799e (taxeditor): ref #8350: searchfield for namedArea is configurable
Katja Luther
01:46 PM Revision f541ce53 (cdmlib): ref #8350: create new predicate for namedArea search by abbreviation
Katja Luther
01:09 PM feature request #8544 (New): check for number of synonyms entered in name editor by copy paste an...
mail WB:

ich habe gerade aus Versehen die Fehlermeldung in den Name-Editor kopiert. Das gibt eine SEHR lange Sy...
Katja Luther
11:44 AM feature request #8350 (In Progress): Search dialog for named areas should work with abbreviations
Katja Luther
10:36 AM Revision e5299170 (cdmlib-apps): cleanup
Andreas Müller
10:29 AM Revision 9bc63b7a (cdmlib): cleanup
Andreas Müller

09/11/2019

07:25 PM feature request #8134: Implement verbatim type information in dataportal
Andreas Kohlbecker wrote:
> The textual type designation are now at least shown in the taxon synonymy and in the nam...
Andreas Müller
04:53 PM feature request #8134: Implement verbatim type information in dataportal
test data dumped and stored in _testdata/edit-int/testdb/5.10/cdm_integration_reference-2019-09-11-001.sql.bz2 Andreas Kohlbecker
04:41 PM feature request #8134: Implement verbatim type information in dataportal
The textual type designation are now at least shown in the taxon synonymy and in the name page.
Open issues are:
...
Andreas Kohlbecker
11:50 AM feature request #8134 (In Progress): Implement verbatim type information in dataportal
Andreas Kohlbecker
11:50 AM feature request #8134: Implement verbatim type information in dataportal
[Feedback from Walter]
Hallo,
mit Bezug auf das Portal folgender Vorschlag meinerseits:
Wenn nach dem Ausgabet...
Andreas Kohlbecker
10:19 AM feature request #8134 (New): Implement verbatim type information in dataportal
Andreas Müller
10:18 AM feature request #8134: Implement verbatim type information in dataportal
Andreas Kohlbecker wrote:
> Hi Andreas,
>
> the verbatim type information is represented by the class `TextualTyp...
Andreas Müller
08:34 AM feature request #8134 (Feedback): Implement verbatim type information in dataportal
Hi Andreas,
the verbatim type information is represented by the class `TextualTypeDesignation`. This class has a b...
Andreas Kohlbecker
07:18 PM bug #4964: footnotes for taxonRelationship sources and annotations should be rendered together
The other milestone should not be used anymore Andreas Müller
04:37 PM Revision 2d95e99f (cdm-dataportal): ref #8134 displaying textual type designations in the taxon s...
Andreas Kohlbecker
04:30 PM feature request #8538 (Closed): add text_l10n for TextualTypeDesignation.text to web service resp...
Andreas Kohlbecker
12:53 PM feature request #8538 (Resolved): add text_l10n for TextualTypeDesignation.text to web service re...
Applied in changeset commit:cdmlib|c4942e5e5d1cc2acc566cf357a22a90a140ca5e0. Andreas Kohlbecker
08:49 AM feature request #8538 (Closed): add text_l10n for TextualTypeDesignation.text to web service resp...
The free text in `TextualTypeDesignation` needs to be localized for web service responses. See `DescriptionElementBea... Andreas Kohlbecker
04:29 PM Revision 5dbe78e5 (cdmlib): adding annotations endpoint to TypeDesignationController
Andreas Kohlbecker
03:50 PM Revision cae05f09 (cdmlib): ref #8538 initalization of type designation sources
Andreas Kohlbecker
03:23 PM Revision f814b2cd (cdm-dataportal): ref #8543 documenting foonote-key-suggestino handling in some...
Andreas Kohlbecker
03:19 PM task #8543 (Closed): overcome distinction of annotation and other foonotes
The distinction of annotation and other foonotes is causing problems as reported in #2602 and in #4964
Moreover it...
Andreas Kohlbecker
02:03 PM Revision 64952a5f (taxeditor): typo
Patrick Plitzner
02:03 PM Revision d956f204 (taxeditor): ref #8450 Show recordBasis and isIndividualsAssociation in table
Patrick Plitzner
02:03 PM Revision 85f2a3c3 (taxeditor): ref #8539 Add association when adding specimens to the matrix
Patrick Plitzner
02:02 PM Revision 0ef48948 (cdmlib): ref #8450 Add recordBasis and isIndividualsAssociation to wrapper
Patrick Plitzner
02:02 PM Revision d6cce84d (cdmlib): ref #8539 Add new DescriptionType for IndividualsAssociations
Patrick Plitzner
01:40 PM Revision 7fd4839f (cdmlib-apps): ref #1444 fix author handling for ERMS sources import
Andreas Müller
01:39 PM Revision e23437fb (cdmlib-apps): ref #1444 fix taxon handling for source of synonymy (but probabl...
Andreas Müller
01:38 PM Revision 9ec5ede2 (cdmlib-apps): ref #8508 latest changes to ERMS pipeline validator
Andreas Müller
01:37 PM Revision 768bf497 (cdmlib-apps): cleanup
Andreas Müller
01:36 PM Revision bee39571 (cdmlib-apps): ref #8509 add last action mapping to PesiDescriptionExport
Andreas Müller
01:35 PM Revision e91902c3 (cdmlib-apps): ref #8509 fix empty list bug for pesi RelTaxon export
Andreas Müller
01:34 PM Revision 1030c26a (cdmlib-apps): ref #8509 cleanup and handle nomCode not as class variable
Andreas Müller
01:29 PM Revision 8687bbb5 (cdmlib-apps): ref #1444 improve vernacular import (ERMS)
Andreas Müller
01:26 PM Revision b2956a5e (cdmlib-apps): ref #8509 add Subterclass, Parvorder and Infrakingdom, adapt nu...
Andreas Müller
01:17 PM Revision be6b41e5 (cdmlib-apps): cleanup
Andreas Müller
01:05 PM Revision 35b3906e (cdmlib): cleanup
Andreas Müller
01:05 PM feature request #8542 (New): TaxEditor only remembers the last db and credentials not last db for...
mail AM:
derzeit scheint es so zu sein, dass sich der TaxEditor nur die allgemein zuletzt verwendete DB + credenti...
Katja Luther
01:04 PM bug #8541 (New): Unify Phylum and Division
According to ICNAFP (https://www.iapt-taxon.org/nomen/pages/main/art_3.html) phylum and division are the same. Also i... Andreas Müller
01:03 PM feature request #8540 (New): for localhost mgd the name of the db is not shown in title
mail AM:
bei Verwendung von Localhost Mgd. Wird derzeit die DB nicht im Titel angezeigt. Das ist gerade etwas st...
Katja Luther
12:53 PM Revision c4942e5e (cdmlib): fix #8538 serialization of TextualTypeDesignation.text as text_l10 im...
Andreas Kohlbecker
12:51 PM task #8513 (Closed): CdmUtils: remove MUST_EXIST_FILE and getResourceFolderSeperator()
everything works as expected Andreas Kohlbecker
12:50 PM task #8505 (Closed): ConfigFileUtil: turn all spring bean methods into not statical methods.
fully solved and working as expected since there are no longer any problems in the dependent products Andreas Kohlbecker
11:48 AM feature request #8539 (Closed): Add IndividualsAssociation when adding specimens to the character...
Patrick Plitzner
10:21 AM Revision 983f0766 (cdmlib): ref #8526: fix failing test in editor
Katja Luther
10:12 AM Revision eeaeb3d1 (taxeditor): fix failing test
Katja Luther
10:10 AM Revision 2b83f448 (taxeditor): fix NPE for inverse TaxonrelationshipTypeInverseContainer
Katja Luther
10:10 AM Revision 6b77cd39 (taxeditor): ref #8526: remove workaround for hotfix
Katja Luther
09:30 AM Revision 95468153 (cdmlib): ref #8526: fix failing test
Katja Luther
09:21 AM bug #8535: Connect Dialog: Connect failure warning unreadable
Thank you for this screenshot. This clarifies the situation. There are a couple of eclipse bugs due to which eclipse ... Andreas Kohlbecker
08:28 AM bug #8535: Connect Dialog: Connect failure warning unreadable
This is how it looks on Windows:
![](picture342-2.png)
Should look similar after changing for linux. But open ...
Andreas Müller
06:57 AM bug #8535: Connect Dialog: Connect failure warning unreadable
Andreas Kohlbecker wrote:
> Andreas Müller wrote:
> > This is only an issue on linux.
>
> Maybe only for KDE. @P...
Patrick Plitzner
09:05 AM feature request #7695: web service providing compact TypeDesignation representation for homotypic...
moving to release 5.10 as this is prerequisite for #7696 Andreas Kohlbecker
09:00 AM feature request #7695: web service providing compact TypeDesignation representation for homotypic...
The `TextualTypeDesignation` also need to be handled by the `TypeDesignationSetManager` currently the controller meth... Andreas Kohlbecker
 

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