Activity
From 08/21/2019 to 09/19/2019
09/19/2019
- 06:31 PM task #8559 (Worksforme): Revision of the technical concept for the demosites
- from [[Meeting_2019-09-02]]
* "AK entwickelt Konzept für die Demo-Sites und damit den technischen Hintergrund von ... - 06:28 PM discussion #8558 (Closed): Questionaire to get user feedback
- from [[Meeting_2019-09-02]]
AK entwickelt einen einen Fragenkatalog, anhand dessen Interviews mit Nutzern geführt ... - 06:25 PM task #8557 (New): Reorganization of platform user documentation
- Spezialfunktionen von einleitenden Teilen abgrenzen und in Teildokumentationen gliedern.
- 06:24 PM EDIT Platform Etablierung report #8556 (Closed): sifting of existing documentation
- Documentation mainly exists at `bgbmc2.bgbm.fu-berlin.de:/GRUPPEN/BDI/EDIT-Plattform/_Latest Versions/User Manual/`
... - 05:25 PM EDIT Platform Etablierung task #8555 (Closed): Evaluate document format and management for the documentation
- 1. research on suitable document formats
1. documentation within the taxeditor would be preferable (see [[Meeting_20... - 04:34 PM Revision 4f8c0d92 (taxeditor): Fix potential NPE
- 04:31 PM Revision eeca944f (cdmlib): cleanup
- 04:28 PM bug #8488 (Closed): Characters can not be added to feature trees
- Currently it is not possible to select a Character term itself because the vocabulary for that is not accessible from...
- 03:06 PM bug #8488 (Feedback): Characters can not be added to feature trees
- Adding via context menu is possible but not via d&d. To close this ticket we should either implement d&d also or crea...
- 04:28 PM feature request #8554 (Duplicate): Allow drag&drop from character into FeatureTrees
- ~~Currently it is not possible to select a Character term itself because the vocabulary for that is not accessible fr...
- 03:23 PM bug #8329 (Worksforme): Multiple representations exception when adding name relationship with already existing author
- I also can't reproduce anymore.
- 01:54 PM Revision efc4a9f8 (taxeditor): ref #8494: layout issues in abcd import preference page
- 01:43 PM Revision ce80191a (taxeditor): ref #7321 fix NPE in PolytomousKeyListLabelProvider (II)
- 01:33 PM bug #8382 (Closed): Local Supplemental Data Source Preferences should reflect the state of admin preferences
- Works as expected and can be closed
- 01:30 PM Revision 5c7792df (cdmlib): ref #8450 Move key generation to long running task
- 01:30 PM Revision 8ab41788 (taxeditor): ref #8450 Move key generation to long running task
- 01:28 PM bug #8034 (Closed): Recently used references shows all references
- works fine
- 01:16 PM Revision a6381bb2 (cdmlib): fix NPE in abcd import
- 12:40 PM Revision 1d03dc2b (cdmlib): minor
- 12:27 PM Revision 152b29a9 (cdmlib): ref #8469 fix NoSuchElementException (but issue itself might still be open)
- 12:23 PM Revision 2033d56d (cdmlib): add derivedFrom to propertyPath in findFieldUnitDTO
- 11:58 AM Revision f74a7b15 (taxeditor): minor
- 11:41 AM Revision 9b1e9a85 (cdmlib): ref #8533: minor
- 11:27 AM Revision 581bf882 (taxeditor): ref #7321 fix NPE in PolytomousKeyListLabelProvider
- 11:26 AM Revision 2f767512 (cdmlib): removing AdvancedBeanInitializer log level TRACE
- 10:26 AM bug #8553: progress monitor needs information about running process
- Is there a reason why you explicitly mentioned cdmlight in title? I think this information should be available for al...
- 09:57 AM bug #8553 (New): progress monitor needs information about running process
- long running tasks like the cdmlight export sometimes need a lot of ressources.
To get more informations about why ... - 10:09 AM Revision 301fa63e (cdmlib): ref #8450 Optimize aggregation
- - Only aggregate descriptions with character data
- delete all aggregation before new aggregation - 09:55 AM Revision c335a01c (taxeditor): ref #8450 Create and cache label for quantitative data in row wrapper
- 09:45 AM bug #8533: missing collector and fieldnumber in abcd import
- the imported field unit for B GT 0023581 has collector and fieldNumber see attached file (picture607-1.png)
- 09:42 AM bug #8533: missing collector and fieldnumber in abcd import
- Patrick Plitzner wrote:
> ok, this seems to be a bigger problem.
>
> If you compare your debug output with the tw... - 09:42 AM Revision 7a6a6604 (cdmlib): ref #8450 Create and cache label for quantitative data in row wrapper
09/18/2019
- 07:36 PM bug #8329 (Feedback): Multiple representations exception when adding name relationship with already existing author
- 03:55 PM bug #8329 (Closed): Multiple representations exception when adding name relationship with already existing author
- Played aroung on on rem_conf_am with nightly build and could not reprodcue the problem
- 06:23 PM Revision 4c331cd7 (cdm-dataportal): fixing and improving test assertions
- 05:56 PM bug #8034 (Resolved): Recently used references shows all references
- fix is committed, please review.
- 05:51 PM bug #8034: Recently used references shows all references
- Patrick Plitzner wrote:
> Hmm, now when I already have a reference for the secundum, the selection dialog only shows... - 05:26 PM bug #8034: Recently used references shows all references
- Hmm, now when I already have a reference for the secundum, the selection dialog only shows some of the last used refe...
- 05:11 PM bug #8034: Recently used references shows all references
- Katja Luther wrote:
> Did you selected the book in a selection dialog or only in bulk editor? The recently selected ... - 04:53 PM bug #8034: Recently used references shows all references
- Did you selected the book in a selection dialog or only in bulk editor? The recently selected references are only for...
- 03:42 PM bug #8034: Recently used references shows all references
- ok, I tested the recently selected references with Article and Journal as InReference which works fine. Nevertheless ...
- 03:38 PM bug #8034: Recently used references shows all references
- Another thing I tested:
1. I imported a specimen via ABCD import which had the generic reference "DNA_Bank"
1. I ... - 03:35 PM bug #8034: Recently used references shows all references
- the reference needs to be an article because therefore an inreference type exist
- 03:33 PM bug #8034 (Feedback): Recently used references shows all references
- I am not sure if I tested this correctly. Here is what I did:
1. I selected a Generic reference as secundum for on... - 05:55 PM Revision 25e92728 (taxeditor): ref #8034: fixes for recently selected references
- 05:42 PM Revision 3ea88987 (taxeditor): ref #8034: fix handling with recently selected references in s
- 05:36 PM Revision 030ddaa9 (taxeditor): ref #8450 Only save edited rows in matrix editor
- 05:05 PM bug #8386 (Closed): Disable admin menu when not logged into a DB
- works fine
- 02:17 PM bug #8386 (Resolved): Disable admin menu when not logged into a DB
- fixed with commit:taxeditor|c2b34f0b89feff1b91fdb6eaa3434cad9dfa510f
- 05:04 PM bug #8533: missing collector and fieldnumber in abcd import
- ok, this seems to be a bigger problem.
If you compare your debug output with the two files it seems like it has mi... - 04:47 PM bug #8533 (In Progress): missing collector and fieldnumber in abcd import
- I think we have to move this to 5.11
- 04:46 PM bug #8533: missing collector and fieldnumber in abcd import
- Patrick Plitzner wrote:
> Katja Luther wrote:
> > the collector problem is solved, but the fieldnumber is not deliv... - 04:44 PM bug #8533: missing collector and fieldnumber in abcd import
- Katja Luther wrote:
> ah there is another problem, the gathering agent for the tissue is Hutchison and for the tissu... - 04:43 PM bug #8533: missing collector and fieldnumber in abcd import
- Katja Luther wrote:
> the collector problem is solved, but the fieldnumber is not delivered. I debugged and also loo... - 04:37 PM bug #8533: missing collector and fieldnumber in abcd import
- ah there is another problem, the gathering agent for the tissue is Hutchison and for the tissue sample Lautner
- 04:34 PM bug #8533: missing collector and fieldnumber in abcd import
- the collector problem is solved, but the fieldnumber is not delivered. I debugged and also looked at the output and t...
- 03:20 PM bug #8533 (Feedback): missing collector and fieldnumber in abcd import
- I attached the two sample file: one is the DNA unit the other one the associated tissue sample.
I tested on night... - 05:00 PM feature request #8489: Further issues for DB preferences
- move to 5.11 for a last review whether all (wanted) preferences are available as db preferences
- 04:58 PM task #8458 (In Progress): document FieldUnitDTOOccurrenceServiceImpl.findFieldUnitDTO()
- 04:56 PM bug #8494 (In Progress): Better ABCD Preferences Page
- I move this to 5.11 to solve the layout issues.
- 02:39 PM bug #8494: Better ABCD Preferences Page
- Andreas Müller wrote:
> >This is fixed but still "Restore default" does not completely remove the preference (and ev... - 02:25 PM bug #8494: Better ABCD Preferences Page
- >This is fixed but still "Restore default" does not completely remove the preference (and even does not clear the exi...
- 02:23 PM bug #8494: Better ABCD Preferences Page
- The "New provider" text field should have a label "New provider" or similar. Also the "Add Provider" button should be...
- 02:22 PM bug #8494: Better ABCD Preferences Page
- Second time it worked but still there was an empty entry in the provider list
- 02:20 PM bug #8494: Better ABCD Preferences Page
- Trying to create a new provider results in
~~~
login : admin
editor version : 5.10.0.201909180750
server : loc... - 02:19 PM bug #8494 (Feedback): Better ABCD Preferences Page
- is #8385#note-51 already fixed? It is part of **this** ticket description! (copied from)
The field NomenclaturalCo... - 01:10 PM bug #8494 (Resolved): Better ABCD Preferences Page
- The issues above are solved, so I think we can close this ticket.
- 04:54 PM Revision fde0968c (cdm-dataportal): fixing and improving test assertions
- 04:54 PM Revision d8de8d4d (cdm-dataportal): fixing order of typedesignations in registration page
- 04:53 PM task #8456 (Closed): FieldUnitDTO: remove newInstanceMethod
- Katja Luther wrote:
> sorry I missed to add the last commit to this ticket.
Yes, I just realized that, too.
co... - 04:51 PM task #8456 (Resolved): FieldUnitDTO: remove newInstanceMethod
- 04:50 PM task #8456: FieldUnitDTO: remove newInstanceMethod
- sorry I missed to add the last commit to this ticket.
- 04:41 PM task #8456: FieldUnitDTO: remove newInstanceMethod
- Katja Luther wrote:
> Patrick Plitzner wrote:
> > looks fine. Only on question: Why did you remove the null check w... - 04:39 PM task #8456: FieldUnitDTO: remove newInstanceMethod
- Katja Luther wrote:
>
> the null check is now in the gatheringEventDto
The parameter `gathering` is not checked... - 04:30 PM task #8456: FieldUnitDTO: remove newInstanceMethod
- Patrick Plitzner wrote:
> looks fine. Only on question: Why did you remove the null check when creating the Gatherin... - 04:08 PM task #8456 (Feedback): FieldUnitDTO: remove newInstanceMethod
- looks fine. Only on question: Why did you remove the null check when creating the GatheringEvent -> https://dev.e-tax...
- 04:04 PM feature request #8350 (Closed): Search dialog for named areas should work with abbreviations
- tested on nightly. works fine.
- 03:51 PM feature request #8123 (Closed): Make available features a DB preference
- tested on nightly for local and DB prefs. works fine.
- 03:43 PM task #8130: Check if related feature data is cleared when supported facts type is changed
- Move to next milestone for remaining discussion
- 03:43 PM feature request #8242: Implement filtered combo boxes for state selection in CharacterMatrix
- Move to next milestone because this is still considered experimental
- 03:05 PM bug #7321 (Closed): multi-language textfields should not show empty text when there is text
- tested on nightly. works fine
- 02:42 PM Revision c1bd899f (taxeditor): use last selected abcd provider for import
- 02:24 PM feature request #8539 (Closed): Add IndividualsAssociation when adding specimens to the character matrix
- IndividualsAssocations are created when adding specimens which do not yet have one.
Still experimental so no revie... - 02:22 PM feature request #8335 (Closed): Store character matrix table state as DB preference
- closing the ticket -> created a new ticket for using the preference cache #8552
- 02:22 PM bug #8552 (Closed): Avoid DB call for matrix state DB preferences
- Copied from #8335:
looks fine, but if you want to avoid a db call, you can use CdmPreferenceCache.instance().get(P... - 02:19 PM bug #8488 (Resolved): Characters can not be added to feature trees
- 02:11 PM Revision 5bceba97 (taxeditor): ref #8494: save last abcd import configurator
- 01:46 PM feature request #8469 (In Progress): Open PolytomousKeyGenerator issues
- 01:39 PM bug #8517 (Feedback): SpecimenOrObservation: data from protected titleCache missig in portal pages
- This seems to work but handling the protected title cache of the **field** unit in the **derived**unit cachestrategy ...
- 01:20 PM Revision 547189fd (taxeditor): ref #8494: abcd config nom. code is set to default nom. code
- 01:03 PM Revision 5d616c75 (taxeditor): fix taxon search configurator preference
- 12:46 PM Revision 49fbe818 (cdmlib): add ExactValue to possible input for PolytomousKeyGenerator
- 11:43 AM Revision e07260d7 (cdmlib): some cleanup in PolytomousKeyGenerator
- 11:39 AM Revision 430c5895 (taxeditor): fix taxon search configurator preference
- 10:49 AM Revision b42c7515 (cdmlib-apps): ref #8509 fix missing IsraeliExclusiveEconomicZone issue
- 10:48 AM Revision c32dfb15 (cdmlib-apps): ref #1444, ref #8508, ref #8509 improve ERMS notes pipeline
- 10:44 AM Revision 23a201e7 (cdmlib-apps): ref #1444, ref #8508, ref #8508 Finish ERMS image import and some export improvement (not yet ready)
- 10:41 AM Revision 79c223b6 (cdmlib-apps): cleanup
- 10:37 AM Revision 93243e0f (cdmlib): ref #1444 fix missing status in DistributionCreation for ERMS
- 10:36 AM Revision 2dd7e54d (cdmlib): cleanup
- 09:36 AM Revision 9fb73f2a (taxeditor): minor in l10n
09/17/2019
- 05:03 PM Revision 41027fc8 (cdmlib): ref #1444 fix feature creation mapper on setting the feature to the object
- 05:03 PM Revision db5a2cc2 (cdmlib): cleanup
- 04:41 PM Revision c2f509ab (taxeditor): ref #8450 Use cached display data for matrix cells
- 04:40 PM Revision 14ce7344 (cdmlib): ref #8450 Cache display data in row wrapper
- 04:26 PM bug #8382 (Resolved): Local Supplemental Data Source Preferences should reflect the state of admin preferences
- 04:26 PM bug #8382: Local Supplemental Data Source Preferences should reflect the state of admin preferences
- this is fixed with #8489
- 03:33 PM Revision 64705220 (taxeditor): ref #8329: fix multiple representation exception
- 03:33 PM bug #8329 (Resolved): Multiple representations exception when adding name relationship with already existing author
- with the last commit, I could not reproduce this problem anymore. please review.
- 03:23 PM bug #8551 (New): Some preferences should be available without login
- Some preferences like the application language should be available even if not logged into a database.
Currently t... - 02:59 PM bug #7321: multi-language textfields should not show empty text when there is text
- this is fixed.
please review. - 02:59 PM bug #7321 (Resolved): multi-language textfields should not show empty text when there is text
- Applied in changeset commit:taxeditor|3ac05bdb7abe97395018f3fbd57ed143c1a018d7.
- 02:59 PM bug #8034: Recently used references shows all references
- Applied in changeset commit:taxeditor|44bee70cbd379cac7115a2e9de9fda497fd4894f.
- 02:17 PM bug #8034 (Resolved): Recently used references shows all references
- this is fixed. please review.
For review you should open a reference selection dialog and choose a journal.
In a... - 02:58 PM Revision 3ac05bdb (taxeditor): fix #7321: check whether text of default language is set otherwise get another language
- 02:58 PM Revision 44bee70c (taxeditor): fix #8034: preselected references should have correct type
- 02:37 PM bug #7766 (In Progress): Remaining issues for using relationship DTO webservice in portal
- The sort order seem to have problems. Is this an regression or has this point be missed?
- 02:37 PM Revision 91408e53 (cdmlib-apps): ref #8509 increase number of taxa for description export partition
- 02:36 PM Revision 405dc768 (cdmlib-apps): ref #1444, ref #8508, ref #8509 some improvements on ERMS taxon source pipeline
- 02:35 PM Revision 047b2976 (cdmlib-apps): ref #1444, ref #8508, ref #8509 some improvements on ERMS notes and source uses pipeline
- 02:33 PM feature request #8092 (Closed): set default for term and vocabulary selection preferences in selection wizard
- I think this is solved with #8489
- 02:32 PM Revision 7487f98f (cdmlib-apps): ref #1444, ref #8508, ref #8509 improve ERMS vernacular name transformations
- 02:30 PM Revision fa27ce80 (cdmlib-apps): ref #1444, ref #8508, ref #8509 improve ERMS distribution pipeline
- 02:29 PM feature request #8335 (Feedback): Store character matrix table state as DB preference
- looks fine, but if you want to avoid a db call, you can use CdmPreferenceCache.instance().get(PrefKey key)
instead ... - 02:24 PM Revision 1437e192 (cdmlib-apps): ref #8509 improve isPesi taxon handling for export
- 02:23 PM Revision f8226169 (cdmlib-apps): ref #1444, ref #8508, ref #8509 improve rank handling in ERMS pipeline (II)
- 02:19 PM Revision 6535f3fe (cdmlib-apps): ref #8509 latest changes to PesiExportActivatorERMS
- 02:19 PM Revision c3b66cac (cdmlib-apps): ref #1444 latest changes to ErmsImportActivator
- 02:18 PM Revision d7f95f72 (cdmlib-apps): ref #1444, ref #8508, ref #8509 improve rank handling in ERMS pipeline
- 02:12 PM Revision e126ec3a (cdmlib): ref #8034: filter last selected references by inReference type
- 02:12 PM Revision 6af26c13 (cdmlib): ref #8034: filter last selected references by inReference type
- 02:10 PM Revision f953097d (cdmlib-apps): ref #8509 adapt log4j.properties for PESI export
- 02:09 PM Revision 3b2e07f3 (cdmlib-apps): adapt FaueEuErmsMergeActivator to TaxonName.addRelationship changes
- 02:08 PM Revision 668cae43 (cdmlib-apps): ref #1444 adapt ERMS vernacular name import
- 02:07 PM Revision 3c993316 (cdmlib-apps): ref #8509 handle doEmpty tables for PesiDescriptionExport
- 02:05 PM Revision b4ffff96 (cdmlib-apps): adapt FaueEuTaxonNameImport to TaxonName.addRelationship changes
- 02:04 PM Revision a0f9168d (cdmlib-apps): ref #8508 latest changes to ERMS pipeline validation
- 02:03 PM Revision 1491a132 (cdmlib-apps): cleanup
- 02:00 PM Revision 710a5727 (taxeditor): ref #8450 Display full statistical measure label
- 01:54 PM Revision d8053698 (cdmlib): ref #8509 reduce logging for multiple sources problem
- 01:54 PM Revision 1adda666 (cdmlib): ref #1444 fix image import mapping
- 01:54 PM Revision 9db13e41 (cdmlib): fix (revert) incorrect signature in DbLanguageMapper
- 01:54 PM Revision 0997cbeb (cdmlib): update Feature mapper to set the feature immediately to the description item
- 01:54 PM Revision 865c4dc7 (cdmlib): cleanup
- 12:57 PM Revision c88416e1 (cdm-dataportal): ref #7766 completing test case
- 12:36 PM bug #8550 (New): taxon concept relationship editor is hard to find
- It is hard to find the editor for taxon relationships. The UI gives not hints.
This view... - 12:34 PM feature request #8350 (Resolved): Search dialog for named areas should work with abbreviations
- the search dialog searches for the selected abbreviation when the preference is set (default is the titlecache).
Y... - 12:31 PM task #8458 (Resolved): document FieldUnitDTOOccurrenceServiceImpl.findFieldUnitDTO()
- Applied in changeset commit:cdmlib|6b929840715bd88dc66fd3f0cc9abd88530b2487.
- 12:31 PM Revision 6b929840 (cdmlib): fix #8458: remove unused parameter
- 12:25 PM bug #8531: factual data and media view always opened when opening taxon
- the editor now remember whether the facts and media view were open before distribution editor was opened and dependin...
- 12:21 PM task #8425 (Closed): FieldUnitDTO: remove taxonRelatedDerivedUnits
- it is removed.
- 12:19 PM Revision a853ae40 (cdmlib): fix NPE in FieldUnitDto
- 12:07 PM Revision 87b9d856 (taxeditor): ref #8489: show local values in local distr status table
- 11:33 AM feature request #8409 (Closed): add nomenclatural code select to NameRelationField
- Wolf-Henning Kusber wrote:
> works for me as implemented.
>
> Would like to see for all codes ICBN (in capital le... - 11:18 AM feature request #8409: add nomenclatural code select to NameRelationField
- works for me as implemented.
Would like to see for all codes ICBN (in capital letters) except of 2011, and 2018 = ... - 11:11 AM feature request #8409: add nomenclatural code select to NameRelationField
- > Was genau ist mit NameRelationField gemeint? Wir haben so etwas bisher nur bei "Orthographical correction"
Das g... - 10:52 AM feature request #8409: add nomenclatural code select to NameRelationField
- Rückfrage: bei allen Namen ist die "NomenclaturalStatusRow". Was genau ist mit NameRelationField gemeint? Wir haben s...
- 11:31 AM task #8456: FieldUnitDTO: remove newInstanceMethod
- please review
- 11:31 AM task #8456 (Resolved): FieldUnitDTO: remove newInstanceMethod
- Applied in changeset commit:cdmlib|ed34f59fbc07b3029f7c6f939d2108fc324a7d08.
- 11:31 AM Revision ed34f59f (cdmlib): fix #8456: remove newInstance methof in FieldUnitDTO
- 11:24 AM Revision bd131507 (cdm-dataportal): ref #8134 fixing wrong case in type designation status labels
- 11:16 AM Revision f186b3b2 (cdmlib): add citation to type statement in cdm light export
- 11:15 AM Revision f6bc63b0 (cdm-dataportal): avoiding access to unset variable
- 11:07 AM bug #8376 (Closed): RegistrationWorkingsetEditor: prevent clicking any futher buttons after the openting of a popup editor has been triggered
- 10:01 AM bug #8376: RegistrationWorkingsetEditor: prevent clicking any futher buttons after the openting of a popup editor has been triggered
- resolved, ticket can be closed.
- 11:07 AM bug #8377 (Closed): TypeDesignationsEditors: Delete must not be allowe before the workingset is saved
- 10:12 AM bug #8377: TypeDesignationsEditors: Delete must not be allowe before the workingset is saved
- no problems with name types and specimen types to not save erroneously opened editors or close editors with informati...
- 11:07 AM bug #8527 (Closed): TaxonNameEdior: 'Validations' and 'Orthographocal corrections' are lost when editor is saved a second time
- 10:39 AM bug #8527: TaxonNameEdior: 'Validations' and 'Orthographocal corrections' are lost when editor is saved a second time
- No problems with orthographical corrections. Ticket can be closed.
- 10:33 AM bug #8527: TaxonNameEdior: 'Validations' and 'Orthographocal corrections' are lost when editor is saved a second time
- So far no problems with orthographical variants.
No problems with validations. Ex-author teams are shown once the ... - 11:06 AM feature request #8408 (Closed): add nomenclatural code select to NomenclaturalStatusRow
- 10:49 AM feature request #8408: add nomenclatural code select to NomenclaturalStatusRow
- issue resolved, ticket can be closed.
- 11:06 AM feature request #8342 (Closed): shift field Field number
- 09:57 AM feature request #8342: shift field Field number
- perfect, ticket can be closed.
- 11:04 AM Revision 9f9135ff (cdm-dataportal): avoiding access to unset variable
- 11:02 AM feature request #8549 (New): while abcd import problems should be logged more in detail
- this is a ticket to collect all that needs to be handled more in detail while abcd import:
problems like different... - 10:59 AM bug #8548 (Closed): ReferenceEditor: Layout problem when opening Reference editor (new journal, new book, new thesis)
- Layout when opening Reference editor (new journal, new book, new thesis).
see test system, as of 17 Sept 2019. are... - 10:56 AM bug #8533 (Resolved): missing collector and fieldnumber in abcd import
- problems like this should be handled more in detail and the user should be informed about this problems. Therefore I ...
- 10:49 AM feature request #8123 (Resolved): Make available features a DB preference
- 10:44 AM feature request #8123: Make available features a DB preference
- Name facts and taxon facts are preferences available as local and db preference, at the moment there is no vocabulary...
- 10:42 AM bug #8547: Default type of a newly created inReference should depend on the type of the reference
- this problem appears only when the newly created in-reference is not of the type journal.
- 10:18 AM bug #8547 (Closed): Default type of a newly created inReference should depend on the type of the reference
- mail from WB:
Hallo,
ich habe ausgehend vom Details view eine neue NomReferenz (Artikel) eingegeben. Dabei musste... - 10:21 AM Revision 8c34de8f (cdmlib): Fix potential NPE
- 08:48 AM Revision 0fd965ee (cdm-dataportal): ref #8134 simplifying code
- 08:40 AM Revision 85ac09e7 (cdm-dataportal): ref #8134 reverting change which caused duplication of annotation footnotes
- 08:27 AM Revision f3baa35e (cdm-dataportal): fixing bug in initialization of feature_block_distribution
09/16/2019
- 02:48 PM Revision db45a69b (taxeditor): Fix potential NPE
- 02:35 PM Revision f8fa200d (taxeditor): ref #8489: code cleaning
- 01:59 PM feature request #8489 (In Progress): Further issues for DB preferences
- 01:58 PM Revision 6fd0ac3c (taxeditor): ref #8489: improve table on dist status preference page
- 01:29 PM Revision 12c30592 (cdmlib): ref #8450 Fix potential mysql syntax exception
- 12:45 PM Revision b2a4dcd5 (cdmlib-apps): adapt app-import to changes in taxonName.addRelationship
- 12:41 PM Revision 0813a168 (taxeditor): fix potential NPE in NameDescriptionFilter
- 12:36 PM Revision 9557c1a9 (taxeditor): fix potential NPE in NameDescriptionFilter
- 12:25 PM Revision 29d0296e (taxeditor): fix potential NPE in NameDescriptionFilter
- 12:03 PM task #8546 (New): type specimen editor: published in vs. designated by
- Normally the bibliographical authors are also nomenclatural authors who designate types, so far no problem.
If a tre... - 11:19 AM bug #8545 (New): Name editor: Erroneous status in Status type cannot be made withdrawn
- Example: Navicula tenuis F.Meister was erroneously set as "illegitimate"
It was not possible to make this reversible... - 10:33 AM Revision 19b5c3ee (cdmlib): Revert "Use only aggregated taxon descriptions for key generation"
- This reverts commit d6567bcdd0ad9fc7768b7ab85be7f09386c05c6b.
- 10:10 AM bug #8494: Better ABCD Preferences Page
- now the Unit ID mapping is a combo box and the dna provider is a combo box containing the providers defined in the pr...
- 09:34 AM Revision d2389430 (cdmlib): ref #8450 Load supported categorical states in service layer
- 09:32 AM Revision 1d424e89 (taxeditor): ref #8450 Load supported categorical states in service layer
- 09:14 AM Revision 7b1740fe (cdmlib): ref #8489: PreferencePredicate update
- 08:46 AM Revision d9a1b833 (cdmlib): ref #8450 Delete association taxon description when deleting specimen
- 06:46 AM Revision 34c65e31 (taxeditor): Set taxonomic scope for generated polytomous key
- 06:46 AM Revision 40f360dd (taxeditor): ref #8539 Update local data set after aggregation
- 06:46 AM Revision c1bf973e (taxeditor): ref #8539 Update local data set after adding specimen
- 06:46 AM Revision ddb0eef3 (taxeditor): ref #8539 Add specimens to matrix as long running task
- 06:46 AM Revision c0ad6a65 (taxeditor): Fix potential NPE
- 06:46 AM Revision 656fdfa3 (taxeditor): Fix potential NPE
- 06:45 AM Revision 92044c86 (cdmlib): Add missing classes to PermissonClass
- 06:45 AM Revision d6567bcd (cdmlib): Use only aggregated taxon descriptions for key generation
- 06:45 AM Revision ef0587b0 (cdmlib): ref #8539 Set data set for aggregation
- 06:45 AM Revision c67a9006 (cdmlib): Fix potential NPE
- 06:45 AM Revision bbd7e287 (cdmlib): ref #8539 Add specimens to matrix as long running task
09/13/2019
- 02:10 PM Revision 85c6cfb6 (taxeditor): ref #8488: adapt all term related preferences, abcd preference page
- 11:22 AM Revision c9ac7f0d (taxeditor): ref #8489: adapt commonname named area voc selection to other voc preferences
- 11:07 AM Revision e7cdc2fb (taxeditor): ref #8385: better handling of distr preferences and term related preferences
- 11:04 AM Revision e1be2e3b (taxeditor): code cleaning
- 11:02 AM Revision b6ea6bbc (cdmlib): ref #8385: methods for better voc selection pref pages
- 10:03 AM Revision 1805001b (taxeditor): adaptions to changes in PreferencesUtil
09/12/2019
- 02:26 PM Revision e87ad53b (taxeditor): Disabling aggregation charts
- 02:26 PM Revision bf26c791 (taxeditor): Fix potential NPE
- 02:26 PM Revision d19ffefd (taxeditor): ref #8539 Performance and session handling fixes
- 02:26 PM Revision 0e1a7631 (taxeditor): ref #8539 Add association taxon description to descriptive data set
- 02:26 PM Revision ff159227 (cdmlib): ref #8539 Performance and session handling fixes
- 02:26 PM Revision 47c3158d (cdmlib): ref #8539 Add taxon description to wrapper
- 02:26 PM Revision 47def0a1 (cdmlib): ref #8539 Filter aggregated, literature or default descriptions
- 01:54 PM Revision 7915799e (taxeditor): ref #8350: searchfield for namedArea is configurable
- 01:46 PM Revision f541ce53 (cdmlib): ref #8350: create new predicate for namedArea search by abbreviation
- 01:09 PM feature request #8544 (New): check for number of synonyms entered in name editor by copy paste and warn if it is a long list
- mail WB:
ich habe gerade aus Versehen die Fehlermeldung in den Name-Editor kopiert. Das gibt eine SEHR lange Sy... - 11:44 AM feature request #8350 (In Progress): Search dialog for named areas should work with abbreviations
- 10:36 AM Revision e5299170 (cdmlib-apps): cleanup
- 10:29 AM Revision 9bc63b7a (cdmlib): cleanup
09/11/2019
- 07:25 PM feature request #8134: Implement verbatim type information in dataportal
- Andreas Kohlbecker wrote:
> The textual type designation are now at least shown in the taxon synonymy and in the nam... - 04:53 PM feature request #8134: Implement verbatim type information in dataportal
- test data dumped and stored in _testdata/edit-int/testdb/5.10/cdm_integration_reference-2019-09-11-001.sql.bz2
- 04:41 PM feature request #8134: Implement verbatim type information in dataportal
- The textual type designation are now at least shown in the taxon synonymy and in the name page.
Open issues are:
... - 11:50 AM feature request #8134 (In Progress): Implement verbatim type information in dataportal
- 11:50 AM feature request #8134: Implement verbatim type information in dataportal
- [Feedback from Walter]
Hallo,
mit Bezug auf das Portal folgender Vorschlag meinerseits:
Wenn nach dem Ausgabet... - 10:19 AM feature request #8134 (New): Implement verbatim type information in dataportal
- 10:18 AM feature request #8134: Implement verbatim type information in dataportal
- Andreas Kohlbecker wrote:
> Hi Andreas,
>
> the verbatim type information is represented by the class `TextualTyp... - 08:34 AM feature request #8134 (Feedback): Implement verbatim type information in dataportal
- Hi Andreas,
the verbatim type information is represented by the class `TextualTypeDesignation`. This class has a b... - 07:18 PM bug #4964: footnotes for taxonRelationship sources and annotations should be rendered together
- The other milestone should not be used anymore
- 04:37 PM Revision 2d95e99f (cdm-dataportal): ref #8134 displaying textual type designations in the taxon synonymy and in the name page
- 04:30 PM feature request #8538 (Closed): add text_l10n for TextualTypeDesignation.text to web service respones
- 12:53 PM feature request #8538 (Resolved): add text_l10n for TextualTypeDesignation.text to web service respones
- Applied in changeset commit:cdmlib|c4942e5e5d1cc2acc566cf357a22a90a140ca5e0.
- 08:49 AM feature request #8538 (Closed): add text_l10n for TextualTypeDesignation.text to web service respones
- The free text in `TextualTypeDesignation` needs to be localized for web service responses. See `DescriptionElementBea...
- 04:29 PM Revision 5dbe78e5 (cdmlib): adding annotations endpoint to TypeDesignationController
- 03:50 PM Revision cae05f09 (cdmlib): ref #8538 initalization of type designation sources
- 03:23 PM Revision f814b2cd (cdm-dataportal): ref #8543 documenting foonote-key-suggestino handling in some functions
- 03:19 PM task #8543 (Closed): overcome distinction of annotation and other foonotes
- The distinction of annotation and other foonotes is causing problems as reported in #2602 and in #4964
Moreover it... - 02:03 PM Revision 85f2a3c3 (taxeditor): ref #8539 Add association when adding specimens to the matrix
- 02:03 PM Revision d956f204 (taxeditor): ref #8450 Show recordBasis and isIndividualsAssociation in table
- 02:03 PM Revision 64952a5f (taxeditor): typo
- 02:02 PM Revision d6cce84d (cdmlib): ref #8539 Add new DescriptionType for IndividualsAssociations
- 02:02 PM Revision 0ef48948 (cdmlib): ref #8450 Add recordBasis and isIndividualsAssociation to wrapper
- 01:40 PM Revision 7fd4839f (cdmlib-apps): ref #1444 fix author handling for ERMS sources import
- 01:39 PM Revision e23437fb (cdmlib-apps): ref #1444 fix taxon handling for source of synonymy (but probably not yet ready and not yet implemented for export)
- 01:38 PM Revision 9ec5ede2 (cdmlib-apps): ref #8508 latest changes to ERMS pipeline validator
- 01:37 PM Revision 768bf497 (cdmlib-apps): cleanup
- 01:36 PM Revision bee39571 (cdmlib-apps): ref #8509 add last action mapping to PesiDescriptionExport
- 01:35 PM Revision e91902c3 (cdmlib-apps): ref #8509 fix empty list bug for pesi RelTaxon export
- 01:34 PM Revision 1030c26a (cdmlib-apps): ref #8509 cleanup and handle nomCode not as class variable
- 01:29 PM Revision 8687bbb5 (cdmlib-apps): ref #1444 improve vernacular import (ERMS)
- 01:26 PM Revision b2956a5e (cdmlib-apps): ref #8509 add Subterclass, Parvorder and Infrakingdom, adapt number for (sub)section, make (sub)division and (sub)phylum equal and some other improvements for rank handling
- 01:17 PM Revision be6b41e5 (cdmlib-apps): cleanup
- 01:05 PM Revision 35b3906e (cdmlib): cleanup
- 01:05 PM feature request #8542 (New): TaxEditor only remembers the last db and credentials not last db for server
- mail AM:
derzeit scheint es so zu sein, dass sich der TaxEditor nur die allgemein zuletzt verwendete DB + credenti... - 01:04 PM bug #8541 (New): Unify Phylum and Division
- According to ICNAFP (https://www.iapt-taxon.org/nomen/pages/main/art_3.html) phylum and division are the same. Also i...
- 01:03 PM feature request #8540 (New): for localhost mgd the name of the db is not shown in title
- mail AM:
bei Verwendung von Localhost Mgd. Wird derzeit die DB nicht im Titel angezeigt. Das ist gerade etwas st... - 12:53 PM Revision c4942e5e (cdmlib): fix #8538 serialization of TextualTypeDesignation.text as text_l10 implemented in TypeDesignationBaseBeanProcessor and fixing minor probelms related to AbstractModifiableThingBeanProcessor
- 12:51 PM task #8513 (Closed): CdmUtils: remove MUST_EXIST_FILE and getResourceFolderSeperator()
- everything works as expected
- 12:50 PM task #8505 (Closed): ConfigFileUtil: turn all spring bean methods into not statical methods.
- fully solved and working as expected since there are no longer any problems in the dependent products
- 11:48 AM feature request #8539 (Closed): Add IndividualsAssociation when adding specimens to the character matrix
- 10:21 AM Revision 983f0766 (cdmlib): ref #8526: fix failing test in editor
- 10:12 AM Revision eeaeb3d1 (taxeditor): fix failing test
- 10:10 AM Revision 2b83f448 (taxeditor): fix NPE for inverse TaxonrelationshipTypeInverseContainer
- 10:10 AM Revision 6b77cd39 (taxeditor): ref #8526: remove workaround for hotfix
- 09:30 AM Revision 95468153 (cdmlib): ref #8526: fix failing test
- 09:21 AM bug #8535: Connect Dialog: Connect failure warning unreadable
- Thank you for this screenshot. This clarifies the situation. There are a couple of eclipse bugs due to which eclipse ...
- 08:28 AM bug #8535: Connect Dialog: Connect failure warning unreadable
- This is how it looks on Windows:
Should look similar after changing for linux. But open ... - 06:57 AM bug #8535: Connect Dialog: Connect failure warning unreadable
- Andreas Kohlbecker wrote:
> Andreas Müller wrote:
> > This is only an issue on linux.
>
> Maybe only for KDE. @P... - 09:05 AM feature request #7695: web service providing compact TypeDesignation representation for homotypic groups and individual taxa
- moving to release 5.10 as this is prerequisite for #7696
- 09:00 AM feature request #7695: web service providing compact TypeDesignation representation for homotypic groups and individual taxa
- The `TextualTypeDesignation` also need to be handled by the `TypeDesignationSetManager` currently the controller meth...
09/10/2019
- 09:22 PM Revision cfcd10fd (cdmlib): ref #8526: fix swap syn and acc taxon in service method
- 06:11 PM Revision b7e96f18 (cdm-dataportal): fixing typo in class attribute
- 05:45 PM bug #8537 (New): Connect Dialog: Connect failure warning can be missleading
- When attempting to connect with invalid credentials the "Connect Dialog" reports this incident with an in-appropriate...
- 05:33 PM bug #8535: Connect Dialog: Connect failure warning unreadable
- Andreas Müller wrote:
> This is only an issue on linux.
Maybe only for KDE. @Patrick: Do you have similar experie... - 05:20 PM bug #8535: Connect Dialog: Connect failure warning unreadable
- This is only an issue on linux.
- 05:15 PM bug #8535 (New): Connect Dialog: Connect failure warning unreadable
- The relative luminance of font color and background are too close. Enhance the contrast for better readability.
![... - 05:20 PM bug #8536 (Duplicate): Connect Dialog: UI elements exceed the available space
- Depending on the system font dpi settings and "Widget style" parts of the Connect Dialog can become unreadable (see s...
- 05:06 PM task #8534 (New): Usability/UX ticket overview
- This ticket gives an overview on Usability/UX issues in the Taxeditor.
*Although user experience design (UX Desi... - 01:33 PM Revision 16031bd8 (taxeditor): Merge branch 'hotfix/5.9.4'
- 01:29 PM Revision 02a1a17e (taxeditor): ref #8238 Allow adding subtypes to term trees
- 01:22 PM Revision 9b84aae8 (taxeditor): Minor output formatting
- 01:16 PM Revision 32d2424e (taxeditor): Extract utility method for setText() without ModifyEvent
- 01:15 PM Revision 2394b07d (cdmlib): ref #8526: fix swap syn and acc taxon in service method
- 12:22 PM Revision 736f31ef (taxeditor): fix #8532: fix missing selection in common name language combo
- 12:07 PM Revision 4e4592ee (taxeditor): Updated version in pom / project files to taxeditor version : 5.9.4 and cdmlib version : 5.9.0
- 12:05 PM Revision a3a55498 (cdmlib): ref #8533: check for all fields in gatheringEvent whether it is set already
- 11:28 AM bug #8533 (Closed): missing collector and fieldnumber in abcd import
- when importing specimen/dna as associated units where the gathering event information is not complete in one of the d...
- 11:23 AM feature request #8014: Label wording im UI Name Editor
- yes, perfectly implemented, thanks
- 11:17 AM feature request #8014 (Closed): Label wording im UI Name Editor
- 11:16 AM feature request #8014: Label wording im UI Name Editor
- I implemented it exactly as suggested in the screenshot which is attached to the decription of this ticket:
Sugg... - 10:57 AM feature request #8014: Label wording im UI Name Editor
- "Replaced synonym" as decided, fine.
"Validation of": the idea was "Validation of designation" this would be the cor... - 11:03 AM bug #8462 (Closed): NoSuchElementException accessing Optional<RegistrationDTO> in RegistrationWorkingsetPresenter.findRegistrationInContext()
- agreed.
- 09:25 AM bug #8462 (Resolved): NoSuchElementException accessing Optional<RegistrationDTO> in RegistrationWorkingsetPresenter.findRegistrationInContext()
- New species name with new genus with new replaced synonym with new orthographic variant successfully tested. I think ...
- 08:39 AM bug #8462 (Feedback): NoSuchElementException accessing Optional<RegistrationDTO> in RegistrationWorkingsetPresenter.findRegistrationInContext()
- the orthographic variant could also be tested, but I think your tests have sufficient coverage if you have started a ...
- 10:14 AM bug #8532 (Resolved): common name language selection is not selected
- Applied in changeset commit:taxeditor|c2a852f6e6b376780709a8da2ac614b1baf64bef.
- 10:13 AM bug #8532 (Closed): common name language selection is not selected
- Hallo Katja,
in nightly und jetzt auch auf Prduction getestet (mit Cichorieen – Cichorium endivia – Common Name „B... - 10:14 AM Revision c2a852f6 (taxeditor): fix #8532: fix missing selection in common name language combo
09/09/2019
- 06:50 PM bug #8462: NoSuchElementException accessing Optional<RegistrationDTO> in RegistrationWorkingsetPresenter.findRegistrationInContext()
- Tested: new genus with new reference: no problems
Tested: new basionym or replaced synonym with new reference: no pr... - 03:34 PM bug #8374 (Duplicate): Save genus generated for a species with a different reference
- duplicates #8462
- 03:10 PM feature request #8014: Label wording im UI Name Editor
- done, please review.
- 03:09 PM feature request #8014 (Resolved): Label wording im UI Name Editor
- Applied in changeset commit:cdm-vaadin|218b286e1ebf5a962c239f2bd726df714652257e.
- 03:09 PM Revision 218b286e (cdm-vaadin): fix #8014 improving lables related to validation and replaced basionyms, fixing labeling issue in NameRelationField and harmonizing add/remove button
- 01:21 PM bug #8531 (In Progress): factual data and media view always opened when opening taxon
- 01:20 PM bug #8531 (Resolved): factual data and media view always opened when opening taxon
- 01:02 PM bug #8531 (Closed): factual data and media view always opened when opening taxon
- the factual data and media view should stay closed when opening a new taxon.
when opening the distribution editor th... - 01:16 PM Revision 4297a77c (taxeditor): ref #8531: open facts view only if it was open before
- 01:06 PM Revision 0c80b317 (taxeditor): ref
- 01:05 PM Revision bcf07bcc (taxeditor): ref #8385: minor in preferencesUtil
- 11:54 AM feature request #8528: new author should be entered atomized
- If possible we should make this configurable. I guess there is a reason why we currently have it as it is.
- 09:28 AM feature request #8528 (New): new author should be entered atomized
- mail of ERS:
wenn man einen neuen Autoren einer bibliographischen Referenz eingeben will, ist der Cache default-m... - 11:05 AM bug #8530: Multiple Representation Exceptions when editing Textual Type Designations
- Alles war vorher abgespeichert. Nur existierenden Type-Text aufgemacht, Text hinzugefügt, gespeichert.
~~~
login ... - 11:04 AM bug #8530: Multiple Representation Exceptions when editing Textual Type Designations
- Hallo,
der Fehler scheint bei einfachen nom. details nicht aufzutauchen, also wenn nur eine Seitenangabe vorliegt.
... - 11:04 AM bug #8530: Multiple Representation Exceptions when editing Textual Type Designations
- Hallo,
und jetzt einfach nach Anfügen der nom. Referenz des Synonyms und speichern – der Name war offenbar noch nich... - 11:04 AM bug #8530 (New): Multiple Representation Exceptions when editing Textual Type Designations
- there is again a multiple representation exception when editing nomenclatural reference and textual type designation....
- 10:02 AM feature request #8529 (New): [DISCUSS]Display of aggregated descriptions
- NK:
~~Für die Ausgabe der Daten im Portal sind sicher noch darstellungstechnische Anpassungen nötig, ich stelle mi... - 07:55 AM Revision 5d0c723b (taxeditor): setup project: forcing update of snapshot builds
- 07:53 AM Revision e0a54776 (taxeditor): fixing broken imports
09/06/2019
- 10:59 PM bug #8527: TaxonNameEdior: 'Validations' and 'Orthographocal corrections' are lost when editor is saved a second time
- fixed! Please review once the server is updated.
- 10:58 PM bug #8527 (Resolved): TaxonNameEdior: 'Validations' and 'Orthographocal corrections' are lost when editor is saved a second time
- Applied in changeset commit:cdm-vaadin|81472d534399543096e4e64d32b0026f5a8a6023.
- 09:58 PM bug #8527 (Closed): TaxonNameEdior: 'Validations' and 'Orthographocal corrections' are lost when editor is saved a second time
- # THIS BUG IS CRITICAL SINCE IT CAN CAUSE UN-NOTICED DATA LOSS!!!!!!!!
This bug affects the widgets for 'Validati... - 10:58 PM Revision 81472d53 (cdm-vaadin): fix #8527 fixing loss of name relations when saving the name editor again
- 10:29 PM Revision 20abbff9 (taxeditor): ref #8398 adapting taxeditor to changes in NameRelationship
- 10:04 PM feature request #8408: add nomenclatural code select to NomenclaturalStatusRow
- please review once the server is up to date
- 07:38 PM feature request #8408 (Resolved): add nomenclatural code select to NomenclaturalStatusRow
- Applied in changeset commit:cdm-vaadin|ee2bbfeb4aaffddede5d2788b9e3db733282e591.
- 10:04 PM feature request #8409: add nomenclatural code select to NameRelationField
- please review once the server is up to date
- 10:02 PM feature request #8409 (Resolved): add nomenclatural code select to NameRelationField
- Applied in changeset commit:cdm-vaadin|7ee1c79ac0fd622d7a7e7d8acf3963aaae2cf109.
- 10:01 PM Revision 7ee1c79a (cdm-vaadin): fix #8409 adding select for code editions to NameRelationField
- 09:37 PM Revision 29de4478 (cdmlib): ref #8398 adding codeEdition to NameRelationship constructors and to related add* methods in TaxonName and some more
- 09:34 PM feature request #8398: Add nomenclatural code edition to ruleConsidered
- excellently implemented, thanks a lot!
I extended the protected constructors in `NameRelationship` and the related... - 07:38 PM Revision ee2bbfeb (cdm-vaadin): fix #8408 adding select for code editions to nom status row
- 07:35 PM bug #8462: NoSuchElementException accessing Optional<RegistrationDTO> in RegistrationWorkingsetPresenter.findRegistrationInContext()
- ... once the server is updated ;-)
- 06:38 PM bug #8462: NoSuchElementException accessing Optional<RegistrationDTO> in RegistrationWorkingsetPresenter.findRegistrationInContext()
- please review
- 06:35 PM bug #8462 (Resolved): NoSuchElementException accessing Optional<RegistrationDTO> in RegistrationWorkingsetPresenter.findRegistrationInContext()
- Applied in changeset commit:cdm-vaadin|c80e35c14a41f15fc00f6bfa0cd5c46eadf5b37a.
- 06:35 PM Revision c80e35c1 (cdm-vaadin): fix #8462 fuffering new blocking registrations for later association with main registration
- 02:40 PM Revision fe036473 (taxeditor): Merge branch 'hotfix/5.9.3'
- 02:29 PM Revision b52b3d9a (taxeditor): Disable taxon filter + enable text filter on taxon names
- 02:28 PM Revision eac96113 (taxeditor): Disable taxon filter + enable text filter on taxon names
- 02:22 PM Revision f82960da (taxeditor): fix #8526: fix problem swap synonym and taxon
- 02:19 PM bug #8516: Specimen editor (list) can not find FieldUnits with data only in protected titleCache
- correct the `*` at the beginning of the search term helps.
I suggest renaming this issue to "improve and harmonize... - 02:13 PM bug #8526 (Resolved): Swap synonym with accepted taxon does not work
- Applied in changeset commit:taxeditor|cd9c544a43ceb69db7609d422f5c68abc1ccc115.
- 02:08 PM bug #8526 (Closed): Swap synonym with accepted taxon does not work
- the swap synonym with accepted taxon handler/operation calls the service but saves the old taxon afterwards and the n...
- 02:13 PM Revision cd9c544a (taxeditor): fix #8526: fix problem swap synonym and taxon
- 01:39 PM Revision 9a7757ab (taxeditor): Updated version in pom / project files to taxeditor version : 5.9.3 and cdmlib version : 5.9.0
- 01:13 PM Revision edec16d2 (cdmlib): ref #8248 Create State when termType is STATE
- 12:49 PM Revision 530ab926 (taxeditor): Revert "Add checkboxes for associating the ABCD unit with the field unit->wizard"
- This reverts commit 7e19a94091e29289d12df03cf2ad3bcb78b29b81.
- 11:48 AM bug #8525 (Duplicate): search for infraspecific name not working as expected
- Example: https://cybertaxonomy.eu/eu-bon/utis/1.3/search?query=Corvus%20corone%20subsp.%20corone&providers=bgbm-cdm-s...
- 11:46 AM bug #8523: add taxonuuid to name webservice for cdm providers
- Gabriele Dröge wrote:
>
> Higher Taxa klappt irgendwie nicht. Habe folgende uuid probiert: http://caryophyllales... - 11:43 AM bug #8523 (Closed): add taxonuuid to name webservice for cdm providers
- 11:19 AM bug #8523: add taxonuuid to name webservice for cdm providers
- https://cybertaxonomy.eu/eu-bon/utis/1.3/search?query=Hylocereus%20setaceus&providers=bgbm-cdm-server%5Bcaryophyllale...
- 11:15 AM bug #8523: add taxonuuid to name webservice for cdm providers
- hallo Gabi, hast du noch den Beispiel URL?
- 10:54 AM bug #8523 (Closed): add taxonuuid to name webservice for cdm providers
- search results in UTIS without taxonuuid. This uuid is needed to get higher taxa.
Tried with bgbm-cdm-server[caryo... - 11:45 AM bug #8524: Classification service not working with AbstractCdmServerClient
- das kann ich mir eventuell nächste Woche ansehen.
- 11:45 AM bug #8524 (New): Classification service not working with AbstractCdmServerClient
- Higher Taxa klappt irgendwie nicht. Habe folgende uuid probiert: http://caryophyllales.org/cactaceae/cdm_dataportal/t...
- 11:42 AM Revision 95ee3622 (utis-core): fix using taxon.uuid as identifier for cdm server checklists
- 11:01 AM bug #8520 (Rejected): Adding new user Group fails
- Ticket rejected.
- 10:57 AM bug #8521: User details view: Change password button accessible for ROLE_USER_MANAGER
- according to what I wrote in https://dev.e-taxonomy.eu/redmine/projects/edit/wiki/CdmAuthorisationAndAccessControl th...
- 09:44 AM Revision caa2350d (cdmlib): Revert "Add flag for associating the ABCD unit with the field unit"
- This reverts commit 55b1bb529f2938de88202fd3b51447cab3cc5b58.
- 09:44 AM Revision 56dbf016 (cdmlib): ref #8248 Fix lazy loading problems for OWL import
- 09:44 AM Revision fc593598 (cdmlib): Add flag for associating the ABCD unit with the field unit
- 09:44 AM Revision bcd7cc5a (taxeditor): Fix compile errors
- 09:40 AM Revision a7c1650e (cdmlib): ref #1444, ref #8509 improve ZoologicalNameCacheStrategy for infraspecific ranks not being subspecies
- 09:29 AM Revision 7e19a940 (taxeditor): Add checkboxes for associating the ABCD unit with the field unit->wizard
- 08:46 AM Revision c084a011 (taxeditor): adapt TaxEditor to new name type
- 08:12 AM Revision 275bfcd0 (cdmlib): add Vlaans to Language uuids
- 08:12 AM Revision 0f44e94a (cdmlib): ref #1444, ref #8509 improve ZoologicalNameCacheStrategy for infraspecific ranks not being subspecies
09/05/2019
- 11:43 PM Revision 27f61726 (cdmlib): cleanup
- 11:32 PM Revision b8911db5 (cdmlib): ref #1444, ref #8509 fix lastAction handling for ERMS
- 11:32 PM Revision 31b1547a (cdmlib): cleanup and remove ITaxonNameBase.getNomenclaturalCode
- 11:32 PM Revision b47d72dc (cdmlib): rename TaxonNameDefaultCacheStrategyTest
- 10:20 PM bug #8521: User details view: Change password button accessible for ROLE_USER_MANAGER
- I think not only the change password button but generally all User related issues need to be accessible. Can you plea...
- 05:08 PM bug #8521 (Duplicate): User details view: Change password button accessible for ROLE_USER_MANAGER
- The "Change password button" must also be accessible for the Role `ROLE_USER_MANAGER` not only for `Admin`
- 10:16 PM bug #8520 (Feedback): Adding new user Group fails
- Isn't it self-explaining: "must match "[A-Za-z0-9_\.\-]+"?
As discussed we have a rule since 5.9 that usernames an... - 03:47 PM bug #8520 (Rejected): Adding new user Group fails
- I attempted to created the Group "User Manager", this failed with the following exception:
~~~
login : admin
... - 10:02 PM bug #8516: Specimen editor (list) can not find FieldUnits with data only in protected titleCache
- Andreas Kohlbecker wrote:
> Andreas Müller wrote:
> > Have you tried with Asterisk search. The specimen bulk editor... - 09:52 PM Revision 3a180cbe (cdmlib-apps): ref #8508 improve ERMS validation
- 09:51 PM Revision 7e83bb1d (cdmlib-apps): ref #1444 force titleCache update for ERMS import
- 09:51 PM Revision f6c86214 (cdmlib-apps): ref #8508 improve import-export pipeline for ERMS
- 09:49 PM Revision de8788bd (cdmlib-apps): cleanup
- 09:49 PM Revision dc55d92e (cdmlib-apps): ref #1444, ref #8509 Updates for ERMS reference handling
- 09:47 PM Revision 2eaad1b1 (cdmlib-apps): ref #1444, ref #8509 LastAction(Date) handling for ERMS
- 06:59 PM Revision 3f545c52 (cdmlib-apps): minor
- 06:57 PM Revision f13666da (cdmlib-apps): ref #8104 adapt CubaExcelImport to lastNamePart
- 06:56 PM Revision c195f4fb (cdmlib-apps): fix #8513 adapt some Activators to missing CdmUtils method
- 06:15 PM bug #8522 (Closed): Make type status mandatory in Name type designation editor
- Make "type status" mandatory in "Name type designation editor"
Record can be saved without entering a name status. - 05:48 PM bug #8462: NoSuchElementException accessing Optional<RegistrationDTO> in RegistrationWorkingsetPresenter.findRegistrationInContext()
- The solution to this problems is tightly related to #7843.
Since I am assuming that we will decide for strategy 3.... - 05:23 PM bug #8462: NoSuchElementException accessing Optional<RegistrationDTO> in RegistrationWorkingsetPresenter.findRegistrationInContext()
- this seems to happen, when the first name editor has been opened for a new name to be registered and has not jet been...
- 05:45 PM task #7843: blocking registrations can get lost when first TaxonNamePopupEditor with new name is not saved
- I consider strategy 3 from above the most user friendly and robust solution
- 05:19 PM Revision 62de7ebf (taxeditor): Merge branch 'hotfix/5.9.2'
- 04:03 PM bug #8519 (Closed): ROLE_USER_MANAGER missing in FirstDataInserter
- done
- 04:01 PM bug #8519 (Resolved): ROLE_USER_MANAGER missing in FirstDataInserter
- Applied in changeset commit:cdmlib|06e3b3f860d1e1813e97118ead71807ca7ee6414.
- 03:42 PM bug #8519 (Closed): ROLE_USER_MANAGER missing in FirstDataInserter
- The role `ROLE_USER_MANAGER` is missing in data bases and can not be created via the Taxeditor, see
- 04:01 PM Revision 06e3b3f8 (cdmlib): fix #8519 adding ROLE_USER_MANAGER to FirstDataInserter
- 03:34 PM bug #7991: GrantedAuthority selection dialog extremly slow
- this is a massive problem for me. This dialog is completely unusable.
- 03:26 PM bug #8377: TypeDesignationsEditors: Delete must not be allowe before the workingset is saved
- please review
- 03:25 PM bug #8377 (Resolved): TypeDesignationsEditors: Delete must not be allowe before the workingset is saved
- Applied in changeset commit:cdm-vaadin|66af3161e72892bc06cb3ca9d9eb6e292f87c2fa.
- 03:25 PM Revision 66af3161 (cdm-vaadin): fix #8377 disabling delete buttons in editors for new type designations and fixing bug in button state handling
- 03:14 PM Revision 8a925e42 (taxeditor): ref #8389: adapt term preference handling
- 03:13 PM Revision 1ced89e3 (taxeditor): ref #8389: fix problems with search preferences
- 03:11 PM Revision 05bfe276 (taxeditor): ref #8389: fix problems with search preferences
- 01:35 PM Revision 35910f47 (taxeditor): ref #8389: common name language combo needs termtype
- 01:33 PM Revision 03fa610a (taxeditor): ref #8389: common name language combo needs termtype
- 01:03 PM Revision d4527e75 (taxeditor): ref #8389: adapt term preference handling for nametypedesignation
- 01:00 PM Revision acd9267c (taxeditor): ref #8389: adapt term preference handling for nametypedesignation
- 12:53 PM Revision 62ae7823 (taxeditor): ref #8389: adapt term preference handling
- 12:29 PM Revision ad368340 (taxeditor): ref #8389: fix preferred TaxonFeature Tree creation
- 12:28 PM Revision 901d433e (taxeditor): ref #8389: fix preferred TaxonFeature Tree creation
- 12:01 PM task #8518 (New): [PESI][DW] PESI export rules documented
- Source:
Taxon:
* Displayname: seems not to be used in PESI portal; creation unclear, in ERMS SQL export only t... - 10:58 AM Revision 0be6d8aa (taxeditor): ref #8389: minor
- 10:57 AM Revision 45d7ee4e (taxeditor): ref #8389: minor
- 10:08 AM Revision d947e6ad (taxeditor): ref #8389: fix NPE and smaller issues in preferences
- 10:07 AM Revision e3fb78b6 (taxeditor): ref #8389: fix NPE and smaller issues in preferences
09/04/2019
- 07:00 PM bug #8377 (In Progress): TypeDesignationsEditors: Delete must not be allowe before the workingset is saved
- 06:58 PM bug #8376: RegistrationWorkingsetEditor: prevent clicking any futher buttons after the openting of a popup editor has been triggered
- please review
- 06:57 PM bug #8376 (Resolved): RegistrationWorkingsetEditor: prevent clicking any futher buttons after the openting of a popup editor has been triggered
- Applied in changeset commit:cdm-vaadin|4e9b68d2176a076bf7bd07ee6680f752f2223e2d.
- 06:57 PM Revision 4e9b68d2 (cdm-vaadin): fix #8376 disabling add new button after first click
- 06:18 PM Revision 11c97eb8 (taxeditor): logging feedback on connecting local dev cdm instance
- 05:56 PM Revision ca8b3fe8 (taxeditor): ref #8505 inverting incorrect null check
- 04:27 PM bug #8516: Specimen editor (list) can not find FieldUnits with data only in protected titleCache
- Andreas Müller wrote:
> Have you tried with Asterisk search. The specimen bulk editor like all bulk editor do only a... - 03:21 PM bug #8516 (Feedback): Specimen editor (list) can not find FieldUnits with data only in protected titleCache
- Have you tried with Asterisk search. The specimen bulk editor like all bulk editor do only an exact search. The speci...
- 04:01 PM feature request #8342: shift field Field number
- please review
- 04:01 PM feature request #8342 (Resolved): shift field Field number
- Applied in changeset commit:cdm-vaadin|764269a10375767ce378c5e51a81639543a53eae.
- 04:01 PM Revision 764269a1 (cdm-vaadin): fix #8342 solving layout problems of the AbstractTimePeriodField
- 03:50 PM Revision 079dd1a6 (taxeditor): ref #8489: disable combo for local taxonnode sort preference if not allowed
- 03:49 PM Revision 41b6cbb7 (taxeditor): ref #8489: disable combo for local taxonnode sort preference if not allowed
- 03:33 PM Revision 43b350e8 (taxeditor): ref #8489: taxon node order preferences
- 03:32 PM Revision 14f76d1e (taxeditor): ref #8489: taxon node order preferences
- 03:19 PM Revision d54dbb90 (taxeditor): ref #8489: fix preference and term issues - continue
- 03:19 PM Revision 95ef4486 (taxeditor): fix preferences and term issues
- 03:17 PM Revision d5a2a496 (taxeditor): ref #8489: fix preference and term issues - continue
- 03:08 PM Revision cee6ae63 (taxeditor): Updated version in pom / project files to taxeditor version : 5.9.2 and cdmlib version : 5.9.0
- 02:38 PM Revision 876d7bb3 (cdmlib): ref #8505 adapting ApplicationConfiguration
- 11:57 AM bug #8517 (Resolved): SpecimenOrObservation: data from protected titleCache missig in portal pages
- please review
- 11:55 AM bug #8517: SpecimenOrObservation: data from protected titleCache missig in portal pages
- this is actually a problem in the `DerivedUnitFacadeCacheStrategy` which misses to respect protected `FieldUnit` titl...
- 11:56 AM Revision c487ac2e (cdmlib): ref #8517 DerivedUnitFacadeCacheStrategy handling protected FieldUnit title caches correctly
- 11:14 AM Revision eba7ec9d (taxeditor): ref #8505 adapting taxeditor to changes in ConfigFileUtil
- 10:33 AM Revision 2169c8d6 (cdmlib): ref #8505 removing test code
- 10:31 AM Revision 805b1fcf (cdmlib): ref #8505 making getCdmHomeSubDirFallback() static again
- 09:40 AM Revision 8a7e7d33 (taxeditor): fix preferences and term issues
- 02:31 AM Revision 66061a00 (cdmlib): ref #1444, ref #8509 fix problems in TimePeriod mapping and toXXX method
- 02:31 AM Revision 7efb614a (cdmlib): ref #1444, ref #8509 add last action mapping
- 02:31 AM Revision 30643752 (cdmlib): ref #1444, ref #8509 add DOI mapper
- 02:31 AM Revision 6e9df385 (cdmlib): ref #1444, ref #8509 better handling of trim in mappers
- 02:31 AM Revision b1674bbf (cdmlib): cleanup
- 02:31 AM Revision 563333d2 (cdmlib): minor
- 02:30 AM Revision bb97054a (cdmlib-apps): minor
09/03/2019
- 06:51 PM bug #8517 (Closed): SpecimenOrObservation: data from protected titleCache missig in portal pages
- The following portal pages are missing to show data from protected SpecimenOrObservation.titleCaches:
* Registrati... - 06:49 PM bug #8516 (Feedback): Specimen editor (list) can not find FieldUnits with data only in protected titleCache
- while the *Specimen editor (list)* misses finding the below shown FielUnits the *Specimen editor (tree)* finds them ...
- 06:06 PM bug #6523: Correct display of misspellings in synonymy
- Andreas Kohlbecker wrote:
> Guten Morgen,
>
> ich bin hinsichtlich einer endgültigen Lösung leidenschaftslos und... - 05:04 PM task #8512: Consider making Registration a subclass of IdentifiableEntity
- As far as I understood will PhycoBank repeat the same registration that has been done in another registration.
Thi... - 04:54 PM task #8512: Consider making Registration a subclass of IdentifiableEntity
- We first need more information about the semantic of the additional registration. Should it be a pure clone like in G...
- 12:59 PM task #8512 (New): Consider making Registration a subclass of IdentifiableEntity
- For Phycobank it is needed to refer to external registration identifiers.
E.g.: A registration made in mycobank, z... - 04:21 PM task #8514 (Closed): remove all PhycoBank redmine instances
- copied from #7265
- 04:12 PM bug #8189: Allow configuration of 'user.home' via the spring environment
- Andreas Müller wrote:
> Andreas Müller wrote:
> > The test ConfigFileUtilTest.testGetFolderSeperator does not work ... - 04:11 PM task #8513: CdmUtils: remove MUST_EXIST_FILE and getResourceFolderSeperator()
- if there are no problems in the products a review by another person will not be needed and the ticket can be closed.
- 04:09 PM task #8513 (Resolved): CdmUtils: remove MUST_EXIST_FILE and getResourceFolderSeperator()
- Applied in changeset commit:cdmlib|c3fca4bd9b4120f48b605f36f5efc59dd8e4bba8.
- 04:08 PM task #8513 (Closed): CdmUtils: remove MUST_EXIST_FILE and getResourceFolderSeperator()
- follow up to #8189
The getResourceFolderSeperator() method is not needed at all. The separator character is only u... - 04:09 PM Revision c3fca4bd (cdmlib): fix #8513 removing MUST-EXIST file and getResourceFolderSeperator() method
- 03:29 PM Revision 768f6835 (cdmlib): ref #8505 renaming method to getResourceFolderSeperator() and adapting documentation
- 03:12 PM task #8505 (Resolved): ConfigFileUtil: turn all spring bean methods into not statical methods.
- Applied in changeset commit:cdmlib|68ea5e65a8f844fef8efbf698f53f4fbfa6367b3.
- 03:11 PM task #8505 (In Progress): ConfigFileUtil: turn all spring bean methods into not statical methods.
- 03:12 PM Revision 68ea5e65 (cdmlib): fix #8505 turning statical methods of ConfigFileUtil into non statical bean methods
- 10:00 AM bug #8511 (Closed): The structure path in the character details view should have a line break
- As seen in the screen shot, a large structure path expands the width of the details view so that the user has to scro...
- 09:51 AM bug #8510 (New): Non unique object exception when creating FeatureStates
- I could reproduce this by creating about 4-5 FeatureStates for a character tree, then save, and then create another 3...
09/02/2019
- 05:29 PM Revision ae1db989 (cdmlib-apps): new PESI Source and some cleanup
- 05:28 PM Revision a99910b1 (cdmlib-apps): ref #8509 link and notes for ERMS source export
- 04:59 PM Revision ca169a1e (cdmlib-apps): ref #8509 improve findKingdomIdFromTreeIndex
- 04:57 PM Revision 2741552d (cdmlib-apps): ref #8508 further improvements to ERMS pipeline validator
- 04:56 PM Revision 33f66be4 (cdmlib-apps): cleanup
- 04:55 PM Revision 3d4c80f2 (cdmlib-apps): ref #1444 add year to ErmsReferenceImport and not yet handled for source_doi
- 04:54 PM Revision 292c6d7f (cdmlib-apps): cleanup and remove pureNames from ERMSExport (not existing)
- 04:49 PM Revision 1893cc6d (cdmlib-apps): ref #1444 minor changes in ErmsImportActivator
- 04:46 PM Revision b59d1b6d (cdmlib): ref #1444 Add TimePeriodMapper for Referece.year import
- 04:46 PM Revision 42798909 (cdmlib): cleanup
- 01:12 PM Revision 83d22c83 (taxeditor): Merge branch 'hotfix/5.9.1'
- 11:10 AM Revision 0b7666e2 (taxeditor): fix NPE in NomenclaturalStatusElement
- 11:08 AM Revision 5e692cf1 (taxeditor): Updated version in pom / project files to taxeditor version : 5.9.1 and cdmlib version : 5.9.0
- 10:27 AM Revision 63a07f6f (taxeditor): fix NPE in NomenclaturalStatusElement
- 08:59 AM bug #8488 (In Progress): Characters can not be added to feature trees
- It is now possible to add characters to a feature tree via the context menu.
- 08:47 AM Revision f4abf969 (taxeditor): Fix log message
- 08:21 AM Revision e9a06541 (cdmlib): ref #8488 Recurse sub types of term types
- 01:19 AM Revision 7034419f (cdmlib-apps): ref #8509 latest changes to PesiExportActivatorERMS
- 01:19 AM Revision 988f3c81 (cdmlib-apps): ref #8509 fix TaxonName id finding
- 01:18 AM Revision 3deab5ac (cdmlib-apps): cleanup
- 01:15 AM Revision 9ee93cb4 (cdmlib-apps): ref #8508 add some more columns to Reference validation
- 12:13 AM Revision adbd4a26 (cdmlib): fix compile error
09/01/2019
- 11:30 PM Revision 6861320c (cdmlib-apps): ref #8509 update PesiExportActivatorERMS
- 11:22 PM Revision 308df7ca (cdmlib-apps): ref #8509 fix synonym handling in PesiTransformer
- 11:21 PM Revision 0f099b94 (cdmlib-apps): ref #8509 handle ClassCastException for Kingdom taxa
- 11:20 PM Revision 06039e15 (cdmlib-apps): ref #8509 update PesiExportActivatorERMS
- 11:14 PM Revision 3221710a (cdmlib-apps): cleanup
- 11:08 PM Revision 68fa46a4 (cdmlib-apps): ref #8508 add single reference diff to ERMS pipeline validation
- 11:06 PM Revision 2fda02f8 (cdmlib): Exception handling in DbSingleAttributeExportMapperBase
- 11:03 PM Revision 739fa8d6 (cdmlib): minor
- 06:59 PM Revision 96dc2943 (cdmlib-apps): ref #8508 add first ERMS pipeline tests
- 06:23 PM Revision cb547089 (cdmlib-apps): ref #8508 add first ERMS pipeline tests
- 06:21 PM Revision 2c7f7f9b (cdmlib-apps): ref #8509 changes to ERMS export activator
- 06:15 PM task #8509 (In Progress): [PESI][ERMS] Export ERMS data to PESI
- 06:10 PM Revision 72fbf719 (cdmlib-apps): ref #1444 latest changes on ERMS import
- 05:58 PM Revision 52825a0c (cdmlib-apps): cleanup
- 05:52 PM Revision 071a4ba6 (cdmlib): ref #8508 add uniqueResult methods to Source
- 05:52 PM bug #8508 (In Progress): [PESI][ERMS] ERMS import pipeline validation
- Add validation for the correctnes of the ERMS->CDM->PESI pipeline
- 05:49 PM Revision 990febd3 (cdmlib): ref #1444 add some ISO 639-3 languages for ERMS import
- 05:48 PM Revision cfe5663e (cdmlib): error handling in Language csv reading
- 05:47 PM Revision b2c0f0f3 (cdmlib): cleanup and add new TermVocabulary.NewInstance method
08/31/2019
- 03:00 PM Revision c6c1ede7 (cdmlib-apps): ref #1444 handle truncated source.name (reference.titleCache)
- 02:59 PM Revision cdf5b39d (cdmlib-apps): cleanup
- 02:56 PM Revision 649ffe58 (cdmlib-apps): ref #1444 rename ERMS transformer uuids
- 02:51 PM Revision c4879dac (cdmlib-apps): some changes to activators
- 02:50 PM Revision 8804a550 (cdmlib-apps): ref #1444 update pesi/erms sources and destinations
- 02:47 PM Revision 2002808b (cdmlib): ref #1444 handle truncated source.name (reference.titleCache)
- 02:27 PM Revision 21cbca85 (cdmlib): cleanup
08/30/2019
- 09:40 PM bug #8189: Allow configuration of 'user.home' via the spring environment
- Andreas Müller wrote:
> The test ConfigFileUtilTest.testGetFolderSeperator does not work anymore on windows systems ... - 04:50 PM bug #8189 (Closed): Allow configuration of 'user.home' via the spring environment
- all remaining tasks copied to #8505
and closing this ticket - 08:59 PM feature request #8507 (New): Handle common names with same name and language but different area better in data portal
- As an example see: https://www.europlusmed.org/cdm_dataportal/taxon/eaa22491-9bf2-44f6-ba13-3eb3af6134a9
We could... - 08:04 PM task #8391: Name page shows complete name information (II)
- If you create subtasks you should put all tasks to subtasks. Otherwise ticket handling doesn't work well.
Preferred ... - 05:17 PM task #8506 (New): Remove the UpdatableRoutingDataSource, related classes and configuration
- The UpdatableRoutingDataSource has not been used for years and will never be reactivated since this concept would cau...
- 04:54 PM Revision 949c21de (cdmlib-apps): try to fix some compile errors with FeaturNode.NewInstance
- 04:45 PM task #8505 (Closed): ConfigFileUtil: turn all spring bean methods into not statical methods.
- follow up to #8189
in ConfigFileUtil
**1.** turn all spring bean methods into not statically methods.
**2.*... - 04:41 PM Revision 2e8d7de8 (cdmlib-apps): adapt erms destination and some minor cleanup
- 04:40 PM Revision 9c9b6f73 (cdmlib-apps): cleanup
- 04:35 PM Revision 4095de9d (cdmlib): remove deprecated listRankSpecificRootNodes
- 04:30 PM task #8504 (Closed): Name page: allow hiding the Taxon section via settings
- works as expected
- 03:22 PM task #8504 (Resolved): Name page: allow hiding the Taxon section via settings
- Applied in changeset commit:cdm-dataportal|c05ac190012f0f56d4d2b8d47d6e227eabe353ed.
- 03:05 PM task #8504 (Closed): Name page: allow hiding the Taxon section via settings
- 03:22 PM Revision c05ac190 (cdm-dataportal): fix #8504 setting to hide the taxa section in the name page
- 02:37 PM feature request #8344 (Feedback): Cdm light export: add dummy line in simple facts table
- I have no time to review this. But I remember a discussion with WGB where he complaint that the line endings are linu...
- 01:08 PM feature request #8178 (Rejected): Auto-create absence/presence character for every structure
- Rejecting ticket -> It does not always make sense to auto-create the "presence" character e.g. "Tepal Tip" is a struc...
- 08:56 AM feature request #8299: add typification column to scientific name and homotypical group in cdm light
- move to 5.10 for feedback of WB
08/29/2019
- 10:17 PM bug #8385: Open issues in DB preferences
- can you move open issues to #8489?
- 04:25 PM bug #8385: Open issues in DB preferences
- Andreas Müller wrote:
> In local preferences Publish Flag for "Use Default" the Camel Case is used, not the current ... - 03:30 PM bug #8385: Open issues in DB preferences
- In local preferences Publish Flag for "Use Default" the Camel Case is used, not the current correct label. E.g. (NotP...
- 02:37 PM bug #8385: Open issues in DB preferences
- Andreas Müller wrote:
> Distribution editor: Restore default removes the entry "distribution.status.term" from the a... - 02:37 PM bug #8385: Open issues in DB preferences
- Katja Luther wrote:
> Andreas Müller wrote:
> > Distribution editor status and area selection: restore default dele... - 02:32 PM bug #8385: Open issues in DB preferences
- Distribution editor: Restore default removes the entry "distribution.status.term" from the above table (and completel...
- 02:30 PM bug #8385: Open issues in DB preferences
- Andreas Müller wrote:
> Distribution editor status and area selection: restore default deletes the values correctly ... - 02:28 PM bug #8385: Open issues in DB preferences
- Distribution editor status and area selection: restore default deletes the values correctly but when opening the sele...
- 02:21 PM bug #8385: Open issues in DB preferences
- Names.NomenclaturalStatus restores default only after clicking 2x "Restore Default". Or more exact, clicking the firs...
- 01:58 PM bug #8385: Open issues in DB preferences
- Andreas Müller wrote:
> Andreas Müller wrote:
> > Generally values recovered by "Restore default" often seem not to... - 01:22 PM bug #8385: Open issues in DB preferences
- Andreas Müller wrote:
> Generally values recovered by "Restore default" often seem not to be persisted but old value... - 01:16 PM bug #8385: Open issues in DB preferences
- Andreas Müller wrote:
> Andreas Müller wrote:
> > Saving of "Publish Flag" does not always work. You may try differ... - 01:15 PM bug #8385: Open issues in DB preferences
- Andreas Müller wrote:
> Andreas Müller wrote:
> > General: When choosing "No - allow override" for all 3 entries th... - 01:12 PM bug #8385: Open issues in DB preferences
- Andreas Müller wrote:
> Saving of "Publish Flag" does not always work. You may try different states including allow ... - 12:53 PM bug #8385: Open issues in DB preferences
- Katja Luther wrote:
> Andreas Müller wrote:
> > Is there a reason why allow override is always disabled for "Enable... - 12:48 PM bug #8385: Open issues in DB preferences
- Andreas Müller wrote:
> General: When choosing "No - allow override" for all 3 entries the values shown in local pre... - 12:45 PM bug #8385: Open issues in DB preferences
- Andreas Müller wrote:
> Is there a reason why allow override is always disabled for "Enable Distribution Editor"?
... - 12:34 PM bug #8385 (Feedback): Open issues in DB preferences
- Is there a reason why allow override is always disabled for "Enable Distribution Editor"?
- 11:58 AM bug #8385 (Resolved): Open issues in DB preferences
- abcd preferences are moved to a new ticket, please review the rest.
- 06:58 PM Revision 064339ce (cdm-server): jenkins merging release branch into master (strategy: theirs)
- 06:57 PM Revision abc1d0c7 (cdm-server): updating poms for branch'release/5.9.0' with non-snapshot versions
- 06:49 PM Revision 227b1bf9 (cdm-webapp): Merge branch 'release/5.9.0' into develop
- 06:48 PM Revision 4afdb1a4 (cdm-webapp): jenkins merging release branch into master (strategy: theirs)
- 06:48 PM Revision 284c75d7 (cdm-webapp): updating poms for branch'release/5.9.0' with non-snapshot versions
- 06:48 PM Revision 59697fa9 (cdm-webapp): jenkins bumping cdmlib.version and cdm.vaadin.version to 5.9.0
- 06:40 PM Revision 6c55794d (cdm-vaadin): Merge branch 'release/5.9.0' into develop
- 06:40 PM Revision f96f11e8 (cdm-vaadin): jenkins merging release branch into master (strategy: theirs)
- 06:37 PM Revision 56fdc29e (cdm-vaadin): updating poms for branch'release/5.9.0' with non-snapshot versions
- 06:37 PM Revision 48bf314c (cdm-vaadin): jenkins bumping cdmlib.version to 5.9.0
- 06:36 PM Revision ba26d477 (taxeditor): Merge branch 'release/5.9.0' into develop
- 06:36 PM Revision f002ce64 (taxeditor): Merge branch 'release/5.9.0'
- 06:35 PM Revision 18a58edc (cdm-dataportal): Merge branch 'release/5.9.0' into develop
- 06:35 PM Revision 1472f5e7 (cdm-dataportal): updating poms for branch'release/5.9.0' with non-snapshot versions
- 06:35 PM Revision 697769be (cdm-dataportal): release-preparation: production level css
- 06:35 PM Revision 81b02ea5 (cdmlib): Updating develop poms back to pre merge state
- 06:35 PM Revision 42c74407 (cdmlib): Merge branch 'master' into develop
- 06:34 PM Revision 8ef7ee37 (cdmlib): updating develop poms to master versions to avoid merge conflicts
- 06:34 PM Revision 12d3d93e (cdmlib): Merge branch 'release/5.9.0'
- 06:17 PM Revision 3c1d7890 (cdmlib): updating poms for branch'release/5.9.0' with non-snapshot versions
- 04:19 PM Revision 0a635f6d (taxeditor): ref #8385: label issues
- 04:16 PM Revision bff2fb0f (cdm-webapp): jenkins bumping cdmlib.version and cdm.vaadin.version to 5.9.0-SNAPSHOT
- 04:16 PM Revision 4150c139 (cdm-webapp): updating poms for 5.10.0-SNAPSHOT development
- 04:16 PM Revision 35a26a79 (cdm-webapp): jenkins bumping cdmlib.version and cdm.vaadin.version to 5.10.0-SNAPSHOT
- 04:15 PM Revision ada5bbbd (cdm-server): updating poms for 5.10.0-SNAPSHOT development
- 04:15 PM Revision bd4d96d0 (cdm-dataportal): updating poms for 5.10.0-SNAPSHOT development
- 04:15 PM Revision 76b888e0 (taxeditor): Updated version in pom / project files to taxeditor version : 5.10.0-SNAPSHOT and cdmlib version : 5.10.0-SNAPSHOT
- 04:14 PM Revision a1db19cb (taxeditor): Updated version in pom / project files to taxeditor version : 5.9.0 and cdmlib version : 5.9.0
- 04:14 PM Revision 07aaf958 (cdm-vaadin): jenkins bumping cdmlib.version to 5.9.0-SNAPSHOT
- 04:13 PM Revision cdf24655 (cdm-vaadin): updating poms for 5.10.0-SNAPSHOT development
- 04:13 PM Revision 1526db86 (cdm-vaadin): updating poms for 5.9.0 branch with snapshot versions
- 04:13 PM Revision c191327f (cdm-vaadin): jenkins bumping cdmlib.version to 5.10.0-SNAPSHOT
- 04:11 PM Revision d29d8048 (cdmlib): updating poms for 5.10.0-SNAPSHOT development
- 04:06 PM Revision 22a5aeff (cdmlib): ref #8248 Minor fixes for session saving
- 03:40 PM feature request #8503: Create abstract base UI from RegistrationUI and use it for all UIs
- > Especially it needs to be available for the distribution editor
agreed! This means it need to be done for the Di... - 03:10 PM feature request #8503: Create abstract base UI from RegistrationUI and use it for all UIs
- Especially it needs to be available for the distribution editor
- 03:08 PM feature request #8503 (Closed): Create abstract base UI from RegistrationUI and use it for all UIs
- The code which configures the error hanlder should also go into the abstract base class:
~~~java
Delegati... - 03:32 PM feature request #8304: Name page redirects to according taxon depending on query parameter
- the result of our call was the following:
The global switch which overrides the redirect behavior is not causing p... - 03:05 PM Revision 27bf6632 (cdmlib): ref #8441 remove cascading from FeatureState.feature and .state
- 02:49 PM bug #8462: NoSuchElementException accessing Optional<RegistrationDTO> in RegistrationWorkingsetPresenter.findRegistrationInContext()
- the same issue was reported once again:
Test New name entered (not saved) new Basionym, new reference or selected ... - 02:36 PM Revision 75ca45ac (taxeditor): ref #8385: do not show default preference for distributionstatus
- 02:36 PM bug #8502: taxa with doubtful flag lack proper formatting
- Eckhard please can you test in http://test.e-taxonomy.eu/dataportal/preview/euromed/ if this issue is solved now?
- 02:35 PM bug #8502 (Resolved): taxa with doubtful flag lack proper formatting
- Applied in changeset commit:cdm-dataportal|61fc6c9311b1053b08ebb32085842f231edb3746.
- 02:15 PM bug #8502 (Closed): taxa with doubtful flag lack proper formatting
- taxa with doubtful flag lack proper formatting. The dataportal uses the titleCache instead of the taggedTitle.
- 02:35 PM Revision 61fc6c93 (cdm-dataportal): fix #8502 proper handling of tagged text for douptful taxa
- 02:28 PM Revision d84ac885 (taxeditor): ref #8489: fix set default for db term preferences
- 02:12 PM Revision 1d3ab649 (taxeditor): ref #8489: local term list are set to db preference value if default is selected
- 02:06 PM Revision cb75abfb (taxeditor): ref #8385: show db preference for local term preferences if default is selected
- 01:39 PM Revision 6f5b48f3 (taxeditor): ref #8385: setToDefault needs to setApply = true
- 01:15 PM Revision 53d771bb (taxeditor): ref #8385: fix enabling and disabling of distribution editor pref page
- 01:10 PM Revision 643f70e0 (taxeditor): ref #8385: adapt local default labels to db preference
- 12:52 PM Revision 44c33856 (taxeditor): ref #8385: fix enabling of allow override button
- 12:50 PM Revision c4ae573c (taxeditor): ref #8385: fix NPE
- 12:10 PM task #8501 (New): setup OWASP vulnerability checker for projects
The (jenkins plugin](https://wiki.jenkins.io/display/JENKINS/OWASP+Dependency-Check+Plugin) seems not to be worki...- 11:38 AM bug #8500: DistributionStatusUI: Error while detaching UI from session
- back to unassigned ....
- 10:54 AM bug #8500 (New): DistributionStatusUI: Error while detaching UI from session
~~~
[flora-cuba] 2019-08-29 10:12:43,276 WARN [org.eclipse.jetty.server.session.HashSessionManager@5330da99Timer...- 10:58 AM Revision bad6ba63 (cdmlib): avoid NPE in abcd import
- 10:52 AM Revision 10aabbdd (cdmlib): smaller issues in Abcd import
- 09:26 AM Revision 10a23387 (cdmlib-apps): ref #8499 committed additional parameter import for E+M
- 09:20 AM task #8499 (New): Decide how to handle additional parameters like refAuthorString and originalNomenclaturalTitle for Berlin Model/E+M
- They have been additionally imported to CDM from BM, as the information may be needed in future.
For Person it has... - 09:14 AM Revision f49ceeee (cdmlib-apps): cleanup
- 09:11 AM Revision c202fe96 (cdmlib): ref #8248 Check existing feature/state of FeatureState during import
- 09:10 AM Revision 576de855 (cdmlib): ref #8248 Adapt to new term node service
- 09:09 AM Revision f0109d06 (cdmlib-apps): ref #8479 split taxon and description import, remove auditing and some other improvements
- 05:14 AM feature request #8282 (Closed): Implement placementDoubtful in TaxEditor
- We could still add symbols with the current state of the flag to the "Set Flags" submenu. I created a new ticket for ...
- 05:12 AM bug #8498 (In Progress): Set Flags should show the current status of the flags
- Currently when setting the flag one does not know if the flag is set before or not. Especially for doubtful this is t...
08/28/2019
- 05:00 PM bug #8497 (Closed): NullPointerException (NPE) in AbstractCdmServerClient.generateTaxon()
- 03:47 PM bug #8497 (Resolved): NullPointerException (NPE) in AbstractCdmServerClient.generateTaxon()
- Applied in changeset commit:utis-core|8aacc65061a59b7e3efac378d7348d075e2dc0f9.
- 03:39 PM bug #8497 (Closed): NullPointerException (NPE) in AbstractCdmServerClient.generateTaxon()
- this bug breaks all Phycobank requsts:
~~~
Exception in thread "Thread-8191" java.lang.NullPointerException
... - 04:51 PM feature request #8180 (Closed): Add property term "Presence/Absence" to CDM default terms
- Terms and vocabulary are available in the taxeditor and replace possible existing presence/absence terms.
- 04:50 PM feature request #8475 (Closed): Adapt applicable state detail view elements to FeatureState
- 01:27 PM feature request #8475 (Feedback): Adapt applicable state detail view elements to FeatureState
- For future a real freetext search might be preferable for the states in case there are >>10 states, but for now it is...
- 10:00 AM feature request #8475 (Resolved): Adapt applicable state detail view elements to FeatureState
- Removed empty element after first selection.
All issues should be fixed now. - 04:46 PM Revision 076d19ba (cdmlib): ref #8248 Fix import of character structure and property
- 03:47 PM Revision 8aacc650 (utis-core): fix #8497 avoiding NPE when using UTIS with older cdm instance (<5.9)
- 03:45 PM bug #8389 (Resolved): Correct handling of default values with allowOverride=false
- now the allow override selection is now handled seperatly and the preference is only removed when default + allow ove...
- 10:28 AM bug #8389: Correct handling of default values with allowOverride=false
- But this is what this ticket is all about.
I can't remember that we decided to delete if "default" was selected AND ... - 10:12 AM bug #8389: Correct handling of default values with allowOverride=false
- Andreas Müller wrote:
> Katja Luther wrote:
> > The actual implementation is that if the default value is chosen al... - 10:03 AM bug #8389 (Feedback): Correct handling of default values with allowOverride=false
- Katja Luther wrote:
> The actual implementation is that if the default value is chosen allowOverride is set to true ... - 09:58 AM bug #8389 (Resolved): Correct handling of default values with allowOverride=false
- 09:37 AM bug #8389: Correct handling of default values with allowOverride=false
- The actual implementation is that if the default value is chosen allowOverride is set to true and the checkbox is dis...
- 03:41 PM feature request #8282 (Resolved): Implement placementDoubtful in TaxEditor
- the labels are moved
- 03:40 PM Revision 76ab205e (taxeditor): ref #8282: adapt order in navigator menu
- 03:40 PM Revision 89683c7f (taxeditor): ref #8385: smaller label issues
- 03:25 PM Revision 8849a7eb (cdmlib): Merge branch 'develop' of ssh://dev.e-taxonomy.eu/var/git/cdmlib into develop
- 03:24 PM Revision c87189a7 (cdmlib): SpecimenTypeDesignation representations for names
- 03:09 PM bug #8496 (New): Improve public setters for entity collections
- I had a problem when writing the CDM2CDM import. Here I wanted to call the setter and replace the old collection (whi...
- 02:35 PM bug #8496 (Feedback): Improve public setters for entity collections
- Does this implementation cause any real problems or is it only semantically problem?
As far as I remember the culp... - 02:20 PM bug #8496 (New): Improve public setters for entity collections
- These were implemented in #7600.
Unfortunately the current semantics is that e.g. AnnotatableEntity.setAnnotations... - 02:54 PM Revision edf56664 (taxeditor): ref #8475 Remove empty element when single parent is selected
- 02:53 PM Revision ecc03050 (cdmlib): ref #8248 Import applicability feature states
- 02:23 PM feature request #8495 (Closed): classification tree horizontally scrolls to active entrty
- done!
- 02:16 PM feature request #8495 (Closed): classification tree horizontally scrolls to active entrty
- Wenn man sich durch die Classification klickt, verschwindet ab einer gewissen Ebene das, was man eigentlich sehen wil...
- 02:22 PM Revision dab60a9f (cdm-dataportal): ref #8495 classification tree scrolls horizontally to the active item
- 02:21 PM feature request #7600: public setters for entity collections
- There is an open issue with the current implementation. I created a new ticket: #8496
- 02:13 PM task #8479 (In Progress): [PESI][FE] Cdm-2-Cdm import for FauEu
- 02:05 PM bug #8494 (In Progress): Better ABCD Preferences Page
- to be done
see also #8489
also #8385#note-51,
#8385#note-52
~~Why does the nomenclatural code not provid... - 02:04 PM bug #8493: hide taxon page general tab TOC block if empty
- adding work in progress as patch file: attachment:issue-8493.patch
- 02:00 PM bug #8493 (In Progress): hide taxon page general tab TOC block if empty
- I tried solving this issue and found that the table of contents is not empty. For Euro+Med the synonymy has been hidd...
- 01:16 PM bug #8493 (In Progress): hide taxon page general tab TOC block if empty
- reported by Anton:
Hallo,
da ist so ein verrutschtes “Content” (s.u.).
https://www.europlusmed.org/?q=cdm_d... - 01:49 PM Revision de9fe10f (taxeditor): ref #8385: smaller label issues
- 12:57 PM Revision 95a16223 (cdmlib): ref #6774 export feature states
- 12:36 PM Revision 79bd864f (taxeditor): ref #8389: revert disabling of allowOverride for default selection
- 12:14 PM Revision 065f7e99 (cdmlib): ref #6794 Fix endless loop in OWL export
- 11:58 AM bug #8492: Adapt CsvNameExport to rollback only and generally review where and how it should be used
- These 2 tests failed:
~~~
Tests in error:
IOServiceExportTest.exportCSVNameTest:99 ? UnexpectedRollback Trans... - 11:57 AM bug #8492 (New): Adapt CsvNameExport to rollback only and generally review where and how it should be used
- To make the 2 CsvNameExport tests in TaxEditor test environment not fail, read only was set to false in CsvNameExport...
- 11:33 AM Revision 9622040d (cdmlib): ref #6794 Add progress monitor break point
- 11:32 AM Revision fe330183 (cdmlib): ref #6794 Fix potential ClassCastException
- 11:16 AM feature request #8491 (New): show higher taxon graph in name and taxon pages optionally
- Step 1: discuss the concept of showing the higher graph paths
- 10:50 AM Revision 5087fadc (cdm-dataportal): renaming search page tab to 'Taxon graph search'
- 09:59 AM Revision e8617cf0 (taxeditor): ref #8475 Remove empty element after first feature selection
- 09:58 AM Revision e1dfd329 (taxeditor): ref #8389: disable allowOverride when 'use default' is selected
- 09:52 AM Revision 5801fcdb (taxeditor): ref #8475 Update Finish button after state selection
- 09:40 AM feature request #8490 (New): Sitemap implemented
- This feature has been requested since the early days of the dataportal.
A "sitemap" for the following data types i... - 09:17 AM Revision cdbc4cb1 (cdmlib): adapt cdm light column names
- 02:06 AM Revision 5e8ef6ba (cdmlib): fix NPE in setNomenclaturalSource
- 02:05 AM Revision dc6b9347 (cdmlib): revert JAXB issues on NamedArea
- 02:05 AM Revision 1d213d90 (cdmlib): cleanup
- 01:43 AM Revision b617691e (cdmlib): remove redundant JAXB parameters from NamedArea
- 01:42 AM Revision 8da0b07f (cdmlib): ref #8479 add listUUIDs method
- 01:41 AM Revision 91c82b50 (cdmlib): cleanup
08/27/2019
- 10:12 PM Revision e03ae1b2 (cdmlib-apps): ref #8479 rename taxon node import class
- 10:10 PM Revision e94f29fe (cdmlib-apps): ref #8479 add concurrency to configurator
- 10:08 PM Revision c0238c65 (cdmlib-apps): ref #8479 move cdm2cdm methods down to base class
- 04:49 PM Revision b440115a (cdmlib-apps): ref #8479 concurrency in FauEu2CdmImport and some other improvements(?) like parent handling
- 04:36 PM Revision f1783317 (cdmlib): improved logging for TaxonNode with missing sortIndex
- 04:36 PM Revision d8ab86ef (cdmlib): ref #8479 propertyPaths fix for TermVocabulary
- 04:36 PM Revision 61f5e0eb (cdmlib): ref #8479 add concurrency, TaxonNodeOutStreamPartitionerConcurrent
- 04:36 PM Revision fccd79b3 (cdmlib): ref #8479 ordering for taxon nodes implemented in TaxonNodeFilter and in loadById
- 04:36 PM Revision 73556d6c (cdmlib): ref #8479 propertyPaths for TaxonNodeOutStreamPartitioner and introduce interface ITaxonNodeOutStreamPartitioner
- 04:36 PM Revision 676533cc (cdmlib): minor
- 02:44 PM Revision 531b0ee6 (taxeditor): ref #8385: fix specimen pref page
- 12:41 PM Revision 8fecfdbd (taxeditor): ref #8385: fix general prefs and publish flag prefs page
- 12:06 PM Revision d2a55134 (cdmlib): ref #8385: label issues
- 12:06 PM Revision e649e0cb (taxeditor): ref #8385: label issues, search dialog prefs...
- 09:08 AM Revision 694a5f9c (cdmlib): ref #8299: CdmLightExportTable new column
08/26/2019
- 03:27 PM Revision c793c58b (taxeditor): ref #8385: fix namedetails view configuration and rank selection
- 03:16 PM Revision 3d31b229 (taxeditor): ref #8385: fix nomenclatural status page
- 02:56 PM feature request #8299: add typification column to scientific name and homotypical group in cdm light
- I added two columns to homotypical group table: TypeString (for SpecimenTypeDesignations) and TypeCache (for TextualT...
- 02:55 PM Revision 423aaea9 (cdmlib): ref #8299: add TypeCache and TypeString to homotypical group table
- 02:43 PM Revision f02e08f4 (taxeditor): ref #8385: fix general and abcd pages
- 01:46 PM bug #8389: Correct handling of default values with allowOverride=false
- Has this been fixed in 5.9 together with #8385. To me it looks like fixed but I did not test systematically.
Pleas... - 01:41 PM bug #8385: Open issues in DB preferences
- ~~Generally values recovered by "Restore default" often seem not to be persisted but old values are kept.~~
fixed - 01:36 PM bug #8385: Open issues in DB preferences
- ~~Saving of "Publish Flag" does not always work. You may try different states including allow override adn "Restore D...
- 01:35 PM bug #8385: Open issues in DB preferences
- Andreas Müller wrote:
> Andreas Müller wrote:
> > General: When choosing "No - allow override" for all 3 entries th... - 01:22 PM bug #8385: Open issues in DB preferences
- ~~Search dialog: "Search also for titlecache ..." -> "... title cache ..."~~
fixed - 01:20 PM bug #8385: Open issues in DB preferences
- Andreas Müller wrote:
> General: When choosing "No - allow override" for all 3 entries the values shown in local pre... - 01:15 PM bug #8385: Open issues in DB preferences
- ~~Publish Flage:~~
~~"Not Publish" -> "Don't Publish"~~
~~"Use Default (InheritFromParent)" -> kein Camel Case so... - 01:10 PM bug #8385: Open issues in DB preferences
- Andreas Müller wrote:
> Name details view: "Restore Defaults" does not enable "Secundum enabled" and "Secundum Refer... - 01:08 PM bug #8385: Open issues in DB preferences
- ~~NDV: "Whole Authorship section" -> "Whole authorship section"~~
- 01:08 PM bug #8385: Open issues in DB preferences
- ~~NDV: NameCache of the name ... -> "Name cache of the name ..."~~
- 01:07 PM bug #8385: Open issues in DB preferences
- ~~NDV: "Secundum Reference Details" -> "Secundum reference details"~~
- 01:06 PM bug #8385: Open issues in DB preferences
- ~~Name details view: "Restore Defaults" does not enable "Secundum enabled" and "Secundum Reference Details"~~
fixed - 01:02 PM bug #8385: Open issues in DB preferences
- Andreas Müller wrote:
> Same for ranks. They are not stored.
Hmm, maybe I made a mistake. This seems to work. - 12:59 PM bug #8385: Open issues in DB preferences
- ~~Same for ranks. They are not stored.~~
fixed - 12:58 PM bug #8385: Open issues in DB preferences
- ~~Nomenclatural status is not stored. Neither after reopening the pref dialog nor after restarting the TaxEditor the ...
- 12:13 PM bug #8385: Open issues in DB preferences
- ~~General: When choosing "No - allow override" for all 3 entries the values shown in local preferences are "Use Defau...
- 10:48 AM bug #8385: Open issues in DB preferences
- >similar for BiocaseProvider: io.ABCD.providerList is stored with "Keine Provider verfügbar;" which seems to be incor...
- 10:45 AM bug #8385: Open issues in DB preferences
- Andreas Müller wrote:
> > Biocase Provider for associated DNA should be moved to "Biocase Provider"
> >>this is no... - 10:38 AM bug #8385: Open issues in DB preferences
- >io.ABCD.config is stored in DB with value NULL even if nothing has changed, if this is default value, the default sh...
- 10:23 AM bug #8385: Open issues in DB preferences
- ~~ABCD: Restore defaults does not seem to set allowOverride~~
- 10:21 AM bug #8385: Open issues in DB preferences
- Why does the nomenclatural code not provide a default? Is this wanted? Does ABCD not need a nomenclatural code? I rem...
- 10:14 AM bug #8385: Open issues in DB preferences
- > Biocase Provider for associated DNA should be moved to "Biocase Provider"
>>this is not the same because this pro... - 10:00 AM bug #8385: Open issues in DB preferences
- ~~ABCD: Ignore Authorship ... -> Ignore authorship ...~~
fixed - 09:52 AM bug #8385: Open issues in DB preferences
- ~~"Show rank in Distribution Editor" should be relabled -> "Show rank column"~~
this is fixed - 09:05 AM bug #8385: Open issues in DB preferences
- ~~Name Details View: when selecting "restore defaults" allow override is not set to default~~
this is fixed - 09:04 AM bug #8385 (Feedback): Open issues in DB preferences
- ~~Name Details View: if UseDefaults(Disable) is selected the fields are not disabled in the same way as when selectin...
- 01:37 PM feature request #8489 (Resolved): Further issues for DB preferences
- * ~~Common names vocabulary select list:~~
* ~~has no "allow override" (as not yet present in local preferenc... - 01:21 PM feature request #8235 (Closed): Create separate menu for term tree editors for each term tree type
- Created new ticket for adding characters to feature trees - #8488
- 01:20 PM bug #8488 (Closed): Characters can not be added to feature trees
- 08:46 AM feature request #8486 (New): Indicating doubtful state in navigator and add set-doubtful to Set-Flags menu
- Reviewed the setFlag part and set back to new for main task.
- 08:43 AM feature request #8180 (Resolved): Add property term "Presence/Absence" to CDM default terms
- 08:42 AM feature request #8282 (Feedback): Implement placementDoubtful in TaxEditor
- A minor issue: can we have the order of the flags in the same order as in the assistent. That makes it more intuitive...
- 08:39 AM feature request #8447 (Closed): Adapt setPublishForSubtree to new parameters for pro parte, misapplications and hybrids
08/25/2019
- 01:39 PM Revision 7e398530 (cdmlib-apps): ref #8479 fix duplicate source repo creation
- 01:38 PM Revision 712e980f (cdmlib-apps): cleanup
- 01:37 PM Revision e3159da6 (cdmlib-apps): ref #8479 manual last commit for FauEu cdm2cdm import
- 01:35 PM Revision b71e7a9e (cdmlib): ref #8479 allow manual last commit for TaxonNodeOutStreamPartitioner
08/24/2019
- 12:44 AM Revision 42134444 (cdmlib): allow TaxonNodeOutStreamPartitioner to be readOnly = false and use in in CsvNameExport preliminary
- 12:43 AM Revision 774b85df (cdmlib): cleanup
08/23/2019
- 11:56 PM Revision e899bbdf (taxeditor): adapt rollback to new name
- 11:55 PM Revision 80b81212 (cdmlib): remove setRollbackOnly to test if this causes exception in TaxEditor tests. Also it looks like it should be used only in specific contexts
- 11:54 PM Revision 29421c03 (cdmlib): rename rollback method
- 11:53 PM Revision 063973ca (cdmlib): cleanup
- 11:44 PM Revision 8da3d0db (taxeditor): fix compile error due to new rollback method
- 11:10 PM Revision def8dda3 (cdmlib-apps): cleanup TaxonExcelCaryophyllalesActivator
- 11:10 PM Revision 5815f954 (cdmlib-apps): ref #8479 FauEu Cdm2Cdm import more or less running but still slow
- 11:09 PM Revision 9718c259 (cdmlib-apps): minor
- 11:07 PM Revision 52b594a2 (cdmlib): add rollback to ICdmRepository and use in TaxonNodeOutStreamPartitioner
- 11:06 PM Revision d0390c50 (cdmlib): cleanup
- 06:20 PM Revision 48a40f35 (taxeditor): ref #8475 Use feature selection dialog in feature state wizard
- 04:39 PM Revision 26d39860 (cdmlib): cleanup
- 04:12 PM feature request #8475 (Feedback): Adapt applicable state detail view elements to FeatureState
- Patrick Plitzner wrote:
> Andreas Müller wrote:
> > In this case we do not need an "empty" choice for the dropdowns... - 02:59 PM feature request #8475 (Closed): Adapt applicable state detail view elements to FeatureState
- Andreas Müller wrote:
> In this case we do not need an "empty" choice for the dropdowns. A FeatureState always needs... - 10:07 AM feature request #8475: Adapt applicable state detail view elements to FeatureState
- In general this ticket can be closed as it works as expected.
- 10:06 AM feature request #8475: Adapt applicable state detail view elements to FeatureState
- I wonder if we could reduce the availability of "InapplicableIf" and "OnlyApplicableIF" to term nodes of term type "...
- 10:02 AM feature request #8475 (Feedback): Adapt applicable state detail view elements to FeatureState
- In this case we do not need an "empty" choice for the dropdowns. A FeatureState always needs to have both, feature an...
- 04:01 PM feature request #8486: Indicating doubtful state in navigator and add set-doubtful to Set-Flags menu
- Can you add the changes to the ticket or is this not yet pushed?
- 04:00 PM feature request #8486 (Resolved): Indicating doubtful state in navigator and add set-doubtful to Set-Flags menu
- I preliminary give this to me to not forgot reviewing the next function. Disabling already is a good solution though ...
- 09:54 AM feature request #8486 (Closed): Indicating doubtful state in navigator and add set-doubtful to Set-Flags menu
- Indicate the doubtful state in the taxon navigator somehow. E.g. by symbol "?" that we normally use for doubtful info...
- 03:49 PM Revision 11f52a90 (taxeditor): ref #8475 Remove not needed super method
- 03:34 PM feature request #8282: Implement placementDoubtful in TaxEditor
- the setDoubtful menu item is now implemented for the navigator, but it was not possible to set the menu to invisible ...
- 01:45 PM feature request #8282 (Closed): Implement placementDoubtful in TaxEditor
- 12:24 PM feature request #8282: Implement placementDoubtful in TaxEditor
- ok
- 11:37 AM feature request #8282: Implement placementDoubtful in TaxEditor
- Andreas Müller wrote:
> Andreas Müller wrote:
> > Also we should add the doubtful flag to the "Set flags" method in... - 11:35 AM feature request #8282: Implement placementDoubtful in TaxEditor
- Katja Luther wrote:
> the checkbox is moved below the publish checkbox.
works as expected. Ticket can be closed o... - 11:34 AM feature request #8282 (Feedback): Implement placementDoubtful in TaxEditor
- Andreas Müller wrote:
> Also we should add the doubtful flag to the "Set flags" method in the taxon navigator right ... - 09:52 AM feature request #8282 (Resolved): Implement placementDoubtful in TaxEditor
- the checkbox is moved below the publish checkbox.
- 09:51 AM feature request #8282: Implement placementDoubtful in TaxEditor
- Andreas Müller wrote:
> The new field should be close to the taxon node information as it is from taxon node. Curren... - 03:29 PM Revision e9eec17d (taxeditor): Restructure ui.combo package
- 03:25 PM Revision 43ed2498 (taxeditor): ref #8282: add setDoubtful to setFlag menu in navigator
- 03:20 PM Revision d3ca3e94 (taxeditor): ref #8479 fix removeTaxonAgentRelation in TaxEditor
- 03:16 PM bug #8482 (Closed): java.lang.IllegalArgumentException: Collection is empty in DescriptionType.includesType(DescriptionType.java:151)
- The more sophisticated way is to adapt the underlying method to return an EnumSet, not an ordinary Set. With EnumSet ...
- 01:12 PM bug #8482 (Feedback): java.lang.IllegalArgumentException: Collection is empty in DescriptionType.includesType(DescriptionType.java:151)
- The problems obviously is fixed and the implementation looks good. Why did you comment the commit with "workaround"? ...
- 03:11 PM feature request #8235 (Feedback): Create separate menu for term tree editors for each term tree type
- Andreas Müller wrote:
> Generally it works and can be closed.
>
> Open issue (new ticket?) is that Characters can... - 12:06 PM feature request #8235 (Closed): Create separate menu for term tree editors for each term tree type
- Adjusted the context menu entries. Closing ticket.
- 09:50 AM feature request #8235: Create separate menu for term tree editors for each term tree type
- Generally it works and can be closed.
Open issue (new ticket?) is that Characters can not be added to Featuretrees... - 09:49 AM feature request #8235 (Feedback): Create separate menu for term tree editors for each term tree type
- Andreas Müller wrote:
> "New" and "Delete" is enough, we do not need "... Term Tree"
This seems not yet implement... - 02:57 PM Revision 570b874c (taxeditor): ref #8475 Only enable details view for feature and character term nodes
- 02:51 PM Revision b3fbf38e (cdmlib): ref #8180 ... and again try to fix the test data
- 02:37 PM feature request #8447 (Resolved): Adapt setPublishForSubtree to new parameters for pro parte, misapplications and hybrids
- Andreas Müller wrote:
> Andreas Müller wrote:
> > Hybrids are not a set of independent taxa but more a filter on ea... - 11:38 AM feature request #8447 (Feedback): Adapt setPublishForSubtree to new parameters for pro parte, misapplications and hybrids
- Andreas Müller wrote:
> Hybrids are not a set of independent taxa but more a filter on each group. So we should mayb... - 09:44 AM feature request #8447 (Resolved): Adapt setPublishForSubtree to new parameters for pro parte, misapplications and hybrids
- moving synonyms and hybrids is done.
- 09:42 AM feature request #8447: Adapt setPublishForSubtree to new parameters for pro parte, misapplications and hybrids
- Andreas Müller wrote:
> "Pro Parte Synonyme" as pro parte is latin and usually in small letters. However, I don't kn... - 02:36 PM Revision 0c676821 (taxeditor): ref #8447: disable finish if nothing is selected and hybrids disabled if no taxa or syn selected
- 02:35 PM Revision 0a788123 (cdmlib): ref #8180 ... and update test data in other projects
- 02:25 PM Revision 03335762 (cdmlib): ref #8180 fix incorrect UUID in test data
- 02:08 PM Revision 57ab1b79 (cdmlib): ref #7600 add explict adders for adder and remover methods to EntityCollectionSetterAdapter
- 02:08 PM Revision b781b5d5 (cdmlib): minor
- 02:08 PM Revision ed29b851 (cdmlib): ref #8479 make TaxonNode.addAgentRelation public and adapt remove method name
- 02:08 PM Revision 8b10ca03 (cdmlib): adapt CdmLightClassificationExport to hasXXX methods
- 02:08 PM Revision 749e8fb4 (cdmlib): ref #8180 Add vocabulary to test data
- 01:06 PM task #8437 (Resolved): ITermTreeService provides a list method which supports filtering by TermTree.termType,
- my implementation now is generic.
> Also it might be nice to have a little test that it works. Have you tested in ... - 10:28 AM task #8437 (Feedback): ITermTreeService provides a list method which supports filtering by TermTree.termType,
- Andreas Kohlbecker wrote:
> Agreed ... and implemented in the way you pointed out.
The current implementation is ... - 10:21 AM task #8437: ITermTreeService provides a list method which supports filtering by TermTree.termType,
- To me it looks like commit 1a5b2194 is not related to *this* ticket. Can you please check?
- 12:59 PM Revision acdfa184 (cdmlib): ref #8437 using TermType.getGeneralizationOf() to expand the termType restriction
- 12:44 PM Revision 6d8c9ff0 (cdmlib): add doubtful flag to TaxonNodeDto
- 12:30 PM Revision aa312f10 (taxeditor): ref #8475 Enhance FeatureStateWizard
- - Pre-select single parent feature if exists
- filter out features without supported categorical states - 12:07 PM task #8406 (Closed): specimens and occurrence code cleaning and harmonization
- dead code removed.
I think we can close this issue now since all open tasks have been copied to other tickets. - 09:04 AM task #8406: specimens and occurrence code cleaning and harmonization
- Andreas Kohlbecker wrote:
> thank you for fixing this.
>
> there are two commented code parts in this method:
> ... - 12:05 PM Revision c1639218 (cdm-dataportal): ref #8406 removing commented dead code
- 12:04 PM Revision 38f0da6e (taxeditor): ref #8235 adjust context menu items
- 12:04 PM Revision 0d40526c (taxeditor): remove debug message
- 11:21 AM Revision 47ca6691 (cdmlib): cleanup
- 11:18 AM Revision 2c2b731a (cdmlib): fix clone method for User
- 11:17 AM Revision b0a48ddf (cdmlib): ref #8180 Add Presence state vocabulary to default terms
- 11:08 AM Revision 04eabef3 (cdmlib): ref #8479 add hasXXX methods to TaxonNodeFilter
- 11:07 AM Revision e68bc8fa (cdmlib): ref #8479 make TaxonNodeOutStreamPartitioner read only by default.
- 10:34 AM feature request #7450 (Closed): Allow setPublish for subtree to include misapplied names and pro parte synonyms
- Moved better reporting to new ticket #8487 and close *this* ticket.
- 10:33 AM feature request #8487 (New): Report results of set publish
- It should include numbers per each group (taxa, synonyms, MAN, ...)
Also those MAN, ppSyns, shared taxa, which wer... - 10:09 AM bug #8481 (Rejected): NPE when opening feature tree
- I agree. Had a look to the data and for some reason the term with the given id really doesn't exist anymore. Don't kn...
- 09:55 AM feature request #8470: Handle username constraints in user and group editing
- I will implement this for the next release.
- 09:51 AM Revision b850c728 (taxeditor): ref #8282: move doubtful checkbox below publish checkbox
- 09:50 AM Revision aee8ed69 (taxeditor): ref #8447: move hybrids and synonyms
- 09:40 AM Revision 245bd5bc (taxeditor): ref #8447: only misapplied names or pro parte syn should work as well
- 09:31 AM Revision 962e47b4 (taxeditor): ref #3472: adapt labels for operation
- 09:31 AM feature request #3472 (Closed): Update name in source data when changing an accepted taxon into a synonym
- the new ticket is #8478 and the labels are adapted.
08/22/2019
- 04:10 PM Revision c2b34f0b (taxeditor): Do not show admin menu when not logged in
- 04:10 PM Revision a9abb9b0 (taxeditor): Fix "General" missing menu items
- 12:05 PM Revision 0c64a24d (taxeditor): Hide terms menu when not connected
- 11:34 AM Revision 7f9d6ac4 (cdm-vaadin): removing vaading testbench test
- 11:33 AM Revision c4ce17b3 (cdm-vaadin): removing runtime artifact
08/21/2019
- 04:12 PM bug #8481 (Feedback): NPE when opening feature tree
- Looking at the stacktrace this seem like corrupted data as the exception happen during TermRelationBase.getTerm().
... - 04:10 PM feature request #8485 (Closed): Add column groups to character matrix
- Does not have to be reviewed because still experimental
- 04:09 PM feature request #8485 (Resolved): Add column groups to character matrix
- Applied in changeset commit:taxeditor|c264cd9262db5bb03b83d94858c559cc985b8bc2.
- 03:09 PM feature request #8485 (Closed): Add column groups to character matrix
- Groups should reflect the hierarchy of the character tree.
- 04:10 PM feature request #8235 (Resolved): Create separate menu for term tree editors for each term tree type
- 04:09 PM Revision 422fbab5 (taxeditor): ref #8235 Fix term tree sub menu and context menu
- 04:09 PM Revision c264cd92 (taxeditor): fix #8485 Add column groups to character matrix
- 04:09 PM Revision c9332db4 (taxeditor): Move util method to StoreUtil
- 12:29 PM bug #8484 (New): Exception is swallowed in taxon navigator
- In a corrupt database with taxon nodes without classification I got the following exception in the log file.
However... - 11:49 AM task #8483 (New): Return EnumSets in EnumeratedTermVoc.getGeneralizationOf and similar methods
- This may prevent from errors like in #8482
- 11:46 AM bug #8482 (Resolved): java.lang.IllegalArgumentException: Collection is empty in DescriptionType.includesType(DescriptionType.java:151)
- Applied in changeset commit:cdmlib|244c62c6bee1863dfe79d71e0ecae7bdeb4d06b5.
- 11:18 AM bug #8482 (Closed): java.lang.IllegalArgumentException: Collection is empty in DescriptionType.includesType(DescriptionType.java:151)
- Can be reproduced by:
http://int.e-taxonomy.eu/cdmserver/integration_palmae/portal/taxon/ce870eca-0422-4a3c-b849-0... - 11:46 AM Revision 244c62c6 (cdmlib): fix #8482 workaround fix for DescriptionType includes error
- 11:46 AM Revision 59b19202 (cdmlib): minor
- 11:09 AM bug #8385 (Resolved): Open issues in DB preferences
- please review
- 09:51 AM Revision 4a3a3258 (taxeditor): add higher taxon to search options for specimen - taxeditor
- 09:49 AM Revision 319a163b (cdmlib): add higher Taxon search option to specimen search
- 09:17 AM feature request #8339: Completely remove the potentially redundant 'acceptedFor' parameter from synonym page
- Hallo Andreas,
danke für deine Einschätzung. Da du mich in meiner Auffassung bestätigst, werde ich das "is accept... - 09:17 AM feature request #8339: Completely remove the potentially redundant 'acceptedFor' parameter from synonym page
- Hallo Andreas,
das war mir völlig unbekannt, dass wir sowas überhaupt haben/hatten. Daher hatte ich das ganze...
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