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From 07/10/2019 to 08/08/2019

08/08/2019

10:08 PM Revision 3de07382 (cdmlib): minor
Andreas Müller
03:53 PM bug #8430 (Closed): maps zoom to wrong bbox with some layers
Seems to work correctly. I could not find a non-working portal. Also checked some production portals as this was rele... Andreas Müller
03:42 PM feature request #8135 (Feedback): Implement verbatim type information in TaxEditor
Works as expected. Minor issue: translation for button is missing. Can be closed afterwards. Andreas Müller
03:39 PM feature request #8334 (Feedback): Move sources for type designations to details view
Not designated (for SpecimenTypeDesignation) shows up below the sources, but should be above. Sources should be on bo... Andreas Müller
03:24 PM Revision 63ada120 (taxeditor): ref #7597 Use aggregation config (recurse aggregation = true)
Patrick Plitzner
03:24 PM Revision dead0aaf (cdmlib): ref #7597 Add configuration to data set aggregation
- implement recursive aggregation Patrick Plitzner
02:26 PM bug #8446: Allow setPublish for subtree to filter for hybrids
Kajta, can you please review functionality once implemented in TaxEditor? Andreas Müller
02:22 PM bug #8446 (Resolved): Allow setPublish for subtree to filter for hybrids
Applied in changeset commit:cdmlib|c44fd9bd6420a032ab1e04c3b92ee4c20f2aac93. Andreas Müller
02:24 PM Revision 77f78293 (cdmlib): cleanup
Andreas Müller
02:22 PM Revision c44fd9bd (cdmlib): fix #8446 Allow setPublish for subtree to filter for hybrids
Andreas Müller
02:05 PM Revision 9c128421 (taxeditor): ref #8385: adapt local and db preference pages
Katja Luther
02:03 PM Revision fe64715e (cdmlib): ref #8385: add new preference predicates
Katja Luther
01:42 PM task #8449: improve layout of registration page to clearly show the nomencaltural act
The layout is fully satisfying (for new names/types and types)
Order also checked for example for a type only:
...
Wolf-Henning Kusber
10:24 AM feature request #8453 (New): Improve performance of DescriptiveDataSet
A DescriptiveDataSet stores taxon and specimen descriptions and a set of taxon nodes. While taxon descriptions are di... Patrick Plitzner
09:38 AM bug #8440: specimen accession numbers link to specimen page
Tested for Registration page, name page, and specimen page.
Example: Gomphonella acsiae
Links are working.
W...
Wolf-Henning Kusber
09:22 AM task #8424: evaluate publish flags in the full derivative path
As far as I know the SpecimenOrObservation publish flag is not evaluated by webservices at all, yet (or only in very ... Andreas Müller
09:14 AM feature request #8452 (New): [DISCUSS] Should taxa hava an explicit taxon description for specimen?
Maybe it would be helpful to separate taxon descriptions with specimens and those with other description elements.
...
Patrick Plitzner
09:07 AM feature request #8451 (New): Link specimen to taxon via Drag and Drop
It would be a nice feature to be able to link a specimen to a taxon via drag&drop. This could be done from the specim... Patrick Plitzner
08:36 AM feature request #7589 (Closed): Performance, UX and stability patches for CharacterMatrix
Patrick Plitzner
08:36 AM feature request #7589: Performance, UX and stability patches for CharacterMatrix
Closing this ticket to avoid getting to big -> Opening new ticket with specific UX issues -> #8450 Patrick Plitzner
08:35 AM feature request #8450 (New): Character matrix UX
**Details View für Einzelwerte in Matrix**
wenn ich in der Matrix den Details View verwende (was sicher selten der F...
Patrick Plitzner

08/07/2019

10:00 PM task #8449 (Resolved): improve layout of registration page to clearly show the nomencaltural act
please review Andreas Kohlbecker
09:44 PM task #8449 (Closed): improve layout of registration page to clearly show the nomencaltural act
As discussed with Henning on Friday 2nd of August 2019, we decided for the following solution:
* the nomenclatural...
Andreas Kohlbecker
09:47 PM Revision c5abae79 (cdm-dataportal): ref #8449 registration page: better emphasizing the nomenclatural act to make clear what has been registered
Andreas Kohlbecker
04:54 PM feature request #8403 (Rejected): name page: show types specimens as expandable derivate tree
Andreas Kohlbecker
04:54 PM feature request #8403 (Closed): name page: show types specimens as expandable derivate tree
Andreas Kohlbecker wrote:
> code need to be cleaned up
done!
Andreas Kohlbecker
04:53 PM Revision a44d210c (cdm-dataportal): ref #8403 removing rejected implementation
Andreas Kohlbecker
04:50 PM bug #8440 (Resolved): specimen accession numbers link to specimen page
please review Andreas Kohlbecker
04:48 PM Revision e69c4103 (cdm-dataportal): ref #8440 consistent display of type specimens: link to specimen page and showing preferredStableUri
Andreas Kohlbecker
04:06 PM Revision 2ac046d4 (taxeditor): Add missing dependency
Patrick Plitzner
03:52 PM bug #8448 (Resolved): Maps settings > Bounding box inconsistent
Andreas Kohlbecker
03:37 PM bug #8448 (Closed): Maps settings > Bounding box inconsistent
according to the settings documentation the *Bounding box* needs to be entered in degree.
After fixing #8430 using...
Andreas Kohlbecker
03:51 PM Revision 8e2d0259 (cdm-dataportal): ref #8448 changing the map setting to use the projection conform bbox
Andreas Kohlbecker
03:07 PM Revision 2e63da0d (cdm-dataportal): Merge tag '5.8.3' into develop
tagging hotfix 5.8.3 Andreas Kohlbecker
03:07 PM Revision 51624a65 (cdm-dataportal): Merge branch 'hotfix/5.8.3'
Andreas Kohlbecker
03:07 PM Revision 7cc1655b (cdmlib): fix #7450 try to fix failing test when running in test suite
Andreas Müller
03:06 PM Revision e39effec (cdm-dataportal): ref #8430 fixing pojection definition for epsg:7777777 (euromed)
Andreas Kohlbecker
02:44 PM Revision 89eab8c6 (taxeditor): Revert "Fix potential NPE"
This reverts commit 5e45f5399ffa158d92ef215ba484f3f230e6a5ae. Patrick Plitzner
02:44 PM Revision 40ba0cf9 (taxeditor): Revert "Disable (unused) context menu"
This reverts commit aa85a093ec65f0492e9d73cffd87f87be105e438. Patrick Plitzner
02:39 PM Revision 49c7b44e (cdm-dataportal): ref #8430 fixing pojection definition for epsg:7777777 (euromed)
Andreas Kohlbecker
02:14 PM Revision 528e8632 (taxeditor): ref #7597 Fix potential class cast exception
Patrick Plitzner
01:44 PM feature request #8447 (Closed): Adapt setPublishForSubtree to new parameters for pro parte, misapplications and hybrids
Also have in mind that the includeSharedTaxa parameter is valid for accepted taxa, misapplications and pro parte syno... Andreas Müller
01:42 PM bug #8446 (Closed): Allow setPublish for subtree to filter for hybrids
In E+M we do not want to set the publish flag to true for hybrids so we need a filter to do so. Alternatively we shou... Andreas Müller
01:39 PM feature request #7450 (Resolved): Allow setPublish for subtree to include misapplied names and pro parte synonyms
Applied in changeset commit:cdmlib|5fb16579cd1fbce2bfa19f12bebc0d4711b23b90. Andreas Müller
01:39 PM Revision 5fb16579 (cdmlib): fix #7450 allow setPublish for subtree to include misapplied names and pro parte synonyms
Andreas Müller
12:15 PM task #8445 (Closed): improve service description
a.mueller wrote:
„UTIS connects the web services of the Pan-European Species directories Infrastructure (EU-Nomen)...
Andreas Kohlbecker
09:31 AM Revision 5593cba0 (cdmlib): fixing NPE in DerivedUnitFacadeCacheStrategy.getUnitNumber()
Andreas Kohlbecker

08/06/2019

02:40 PM Revision 8a1e1e44 (cdmlib): cleanup
Andreas Müller
02:14 PM Revision 27296e89 (cdmlib): cleanup and stream API for ForSubtreeConfigurator
Andreas Müller
02:13 PM Revision 98df38b9 (cdmlib): pretty print testSetSecundumForSubtree test data
Andreas Müller
01:16 PM Revision 8f81816e (taxeditor): adapt setPublishFlagConfigurator constructor call
Katja Luther
01:14 PM Revision 278d7608 (taxeditor): adapt setPublishFlagConfigurator constructor call
Katja Luther
01:03 PM Revision a138d490 (taxeditor): adapt setPublishFlagConfigurator constructor call
Katja Luther
12:53 PM Revision e867c225 (cdmlib): ref #7450 implement interfaces and signatures for setPublishForSubtree for misapplications and ppSyns (not yet implemented)
Andreas Müller
12:44 PM Revision de671fe5 (cdmlib): minor
Andreas Müller
12:35 PM Revision 16bef6ee (taxeditor): ref #7597 Invoke aggregation in parallel thread
- add progress monitor Patrick Plitzner
12:35 PM Revision aa85a093 (taxeditor): Disable (unused) context menu
Patrick Plitzner
12:35 PM Revision 50cf49ac (taxeditor): Fix potential NPE
Patrick Plitzner
12:35 PM Revision 5e45f539 (taxeditor): Fix potential NPE
Patrick Plitzner
12:34 PM Revision e7eee67d (cdmlib): ref #7597 Add progress monitor to aggregation service call
Patrick Plitzner
11:19 AM Revision ab6c57c0 (cdmlib): ref #8365: fix NPE in abcd tests
Katja Luther
10:02 AM Revision 4e9e938f (cdmlib): use configurator for setPublish flag
Katja Luther

08/05/2019

04:19 PM Revision f928093b (cdmlib): ref #7450 revert the incorrect c&p from last commit
Andreas Müller
04:11 PM Revision 53df0a40 (cdmlib): ref #7450 use PublishForSubtreeConfigurator in TaxonNodeService
Andreas Müller
04:11 PM Revision c1a30095 (cdmlib): cleanup
Andreas Müller
04:11 PM Revision 878c54ea (cdmlib): ref #8429 add SchemaUpdater_58_581 and implement update script for setOfReferences renaming
Andreas Müller
04:11 PM Revision 7bd0a31e (cdmlib): minor
Andreas Müller
02:01 PM bug #8444 (Closed): Show warning if misapplied names / pro parte synonyms are used more then once
... please also consider a "is used more then once" check for such relations Andreas Müller
12:42 PM bug #8443: a user with only rights on a subtree can edit taxa and names of another subtree
is this only an UI issue or is it also a cdmlib-security issue? Andreas Müller
12:14 PM bug #8443 (New): a user with only rights on a subtree can edit taxa and names of another subtree
the user with rights on a subtree is able to edit taxa outside the defined subtree. The only limitation is creation a... Katja Luther
10:58 AM task #8435: Reduce logging amount of exports and other long running tasks
Katja, can you work on this? Andreas Müller
10:55 AM task #8437: ITermTreeService provides a list method which supports filtering by TermTree.termType,
Andreas Kohlbecker wrote:
> Andreas Müller wrote:
> > Have you tested with termType = Character which is a subtype ...
Andreas Müller
10:37 AM task #8437: ITermTreeService provides a list method which supports filtering by TermTree.termType,
Andreas Müller wrote:
> Have you tested with termType = Character which is a subtype for Feature. I don't think the ...
Andreas Kohlbecker
09:59 AM Revision f93dab43 (cdmlib): Revert "minor - fix merge conflict"
This reverts commit fc3932ac4dd186b6f5809863356912f949ae202d. Katja Luther
09:51 AM Revision fc3932ac (cdmlib): minor - fix merge conflict
Katja Luther

08/02/2019

08:39 PM feature request #8442 (Closed): Add fields to handle external terms to DefinedTermBase or TermBase
Similar to those created for Reference (#6663).
The fields are
* last retrieved
* externalId
* externalLink
...
Andreas Müller
08:25 PM feature request #8441 (Closed): Add FeatureState class
... for inapplicableIf and onlyApplicableIf states and add/change the relationships to TermNode Andreas Müller
08:22 PM bug #8429 (In Progress): Rename DeterminationEvent_Reference.setOfReferences_id
For now we do the column renaming with a model change.
DeterminationEvent_Reference.setOfReferences_id = reference...
Andreas Müller
05:54 PM Revision 48468c67 (cdm-dataportal): ref #8440 specimen accession numbers link to specimen page
Andreas Kohlbecker
05:53 PM feature request #8403 (In Progress): name page: show types specimens as expandable derivate tree
code need to be cleaned up Andreas Kohlbecker
05:52 PM feature request #8403 (Rejected): name page: show types specimens as expandable derivate tree
This feature request has been rejected in favor of #8440 Andreas Kohlbecker
05:51 PM bug #8440 (Closed): specimen accession numbers link to specimen page
The specimen accession numbers, aka specimen labels, should be clickable links to the specimen page.
This is neede...
Andreas Kohlbecker
05:47 PM Revision 7449720a (cdmlib): ref #8365 adding combination of collection code and unit number as specimenLabel to DerivedUnitFacade
Andreas Kohlbecker
05:29 PM task #8437: ITermTreeService provides a list method which supports filtering by TermTree.termType,
So we definetely should write tests before closing. Andreas Müller
05:27 PM task #8437 (Feedback): ITermTreeService provides a list method which supports filtering by TermTree.termType,
Have you tested with termType = Character which is a subtype for Feature. I don't think the "Restrictions" implementa... Andreas Müller
11:19 AM task #8437 (Resolved): ITermTreeService provides a list method which supports filtering by TermTree.termType,
please can you review my changes? Andreas Kohlbecker
05:11 PM feature request #8439 (New): Improve Layout of Registration in Name page and Search page
Improve Layout of Registration in Name page and Search page.
Example http://phycobank.org/100628
![](picture013-1....
Wolf-Henning Kusber
04:42 PM Revision 907f5e2f (cdmlib): ref #8422 dependency handling finalized in PolytomousKeyGenerator
Andreas Müller
04:42 PM Revision 54b77a28 (cdmlib): minor
Andreas Müller
04:42 PM Revision 73f1250e (cdmlib): ref #8422 add dependencies to PolytomousKeyGenerator
Andreas Müller
04:42 PM Revision 710cb94e (cdmlib): ref #8422 fix reuse of feature if it shouldn't
Andreas Müller
12:01 PM task #8438 (Closed): remove featureTree/* web services in August 2021 if they are unused
If the featureTree/* web services are no longer used since 2 years we can safely remove them.
Check the cdm-server...
Andreas Kohlbecker
11:56 AM task #8434 (Closed): Change FeatureTree contollers to TermTree controllers
Andreas Kohlbecker
11:55 AM task #8166 (Resolved): Adapt dataportal to term structure changes
check taxon profile settings in a couple of test portals:
* Cichorieae
* Corvidea
* Palmweb
* Cyprus
Andreas Kohlbecker
11:54 AM Revision 9725f08e (cdm-dataportal): ref #8166 using ternmType filter to restrict to feature trees only
Andreas Kohlbecker
11:51 AM Revision fc3e5e6e (taxeditor): ref #8385: fixes in preferences - continue
Katja Luther
11:48 AM Revision 515bfcff (cdmlib): ref #8385: fix TermOrder Enum
Katja Luther
11:18 AM task #8436 (Resolved): featureTree/* services should filter the termTrees by the TermType Feature
Applied in changeset commit:cdmlib|0f5323457637b6f2214287eb3101c7db121540f5. Andreas Kohlbecker
11:18 AM Revision 0f532345 (cdmlib): fix #8436 termTree/* services with termType filter and featureTree/* services restricted to feature trees only
Andreas Kohlbecker
11:18 AM Revision 2ef4c225 (cdmlib): ref #8437 using the listByRestriction method in favour of a new untested dao method & implementing page method in ITermTreeService
Andreas Kohlbecker
10:48 AM Revision c2a446b0 (taxeditor): ref #8385: fixes in preferences - getDefaults() for all pages
Katja Luther

08/01/2019

09:49 PM Revision 14987030 (cdmlib): ref #8422 fix leaf handling and simplify and complete tests
Andreas Müller
09:49 PM Revision a9256c91 (cdmlib): ref #8422 handle single value branches better
Andreas Müller
09:49 PM Revision feedd788 (cdmlib): cleanup
Andreas Müller
09:49 PM Revision aabca655 (cdmlib): ref #8422 change sort order for multi-taxon or multi-state branches
Andreas Müller
06:01 PM Revision 8cf6974b (cdmlib): ref #8434 removing deprecated featureNode/* web service mapping as this was never used since one year
Andreas Kohlbecker
05:58 PM Revision 9dddc68a (cdm-dataportal): ref #8166 adapting dataportal to TermTree novelties: using new term tree controller endpoints
Andreas Kohlbecker
03:00 PM Revision 5420e50d (cdmlib): ref #8422 some fixes for merging in PolytomousKeyGenerator
Andreas Müller
03:00 PM Revision b820a890 (cdmlib): ref #8437 first implementation for listBy termType for TermTreeService, not yet tested
Andreas Müller
03:00 PM Revision 5f16d935 (cdmlib): minor
Andreas Müller
03:00 PM Revision e0d15cb3 (cdmlib): minor toString changes
Andreas Müller
03:00 PM Revision 0174fe98 (cdmlib): ref #8422 adding test for merge mode
Andreas Müller
03:00 PM Revision 3996640f (cdmlib): minor
Andreas Müller
03:00 PM Revision b3cf04bc (cdmlib): rename dependencies
Andreas Müller
02:59 PM task #8437 (In Progress): ITermTreeService provides a list method which supports filtering by TermTree.termType,
implemented but no tests yet, but maybe you can integrate into controller already Andreas Müller
12:26 PM task #8437 (Resolved): ITermTreeService provides a list method which supports filtering by TermTree.termType,
e.g.:
~~~java
public List<TermTree> list(TermType termType, Integer limit, Integer start, List<OrderHint> orde...
Andreas Kohlbecker
01:23 PM bug #8385 (In Progress): Open issues in DB preferences
Katja Luther
12:23 PM task #8436 (Closed): featureTree/* services should filter the termTrees by the TermType Feature
Die featureTree/* Service-Endpunkte sollte selbe Verhalten anzubieten wie zuvor (#8434). In diesem Fall sollte hinter... Andreas Kohlbecker
12:18 PM Revision b2205142 (cdmlib): ref #7597 Adapt to service changes and rename long running method
Patrick Plitzner
12:07 PM Revision 6ad4013c (cdmlib): fix typo
Katja Luther
11:58 AM Revision aa3118b2 (cdmlib): ref #8435: differ between info and debug level
Katja Luther
11:36 AM task #8435 (New): Reduce logging amount of exports and other long running tasks
One single CDMLight export of the euromed database produces 49173 lines of logging like :
~~~
[euromed] 2019-07-3...
Andreas Kohlbecker
10:51 AM Revision cad668ac (cdmlib): ref #8431: adaptions to show the export name in progress monitor
Katja Luther
10:50 AM Revision 23157c56 (taxeditor): ref #8431: improve progress monitor/bar in editor for import/export
Katja Luther
10:50 AM Revision 25a3ce1e (taxeditor): ref #8385: fixes for preferences
Katja Luther
10:03 AM Revision 225e3aa7 (taxeditor): ref #7597 Adapt to service changes
Patrick Plitzner
10:02 AM Revision ed6a16ee (taxeditor): ref #7597 Remove taxon tree aggregation command and handler
Patrick Plitzner
10:01 AM Revision 85ba00f8 (taxeditor): add FIXME message
Patrick Plitzner
10:01 AM Revision 78aa2ad6 (cdmlib): ref #7597 Aggregation for each taxon based on associated specimens
Patrick Plitzner
09:08 AM feature request #7510 (Worksforme): Allow entering aggregated/statistical data for single specimens in character matrix
Entering statistical information is possible if the Feature/Character is defined to allow that.
The data is then e...
Patrick Plitzner
09:03 AM Revision 104ee19a (cdmlib): minor
Andreas Müller
09:03 AM Revision 4c0f844f (cdmlib): ref #8422 fix scoring for categoricalData
Andreas Müller
09:03 AM Revision 50e52e0f (cdmlib): minor
Andreas Müller
09:03 AM Revision ae7c9821 (cdmlib): ref #8422 let PKGenerator only work on TaxonDescriptions for now
Andreas Müller
08:49 AM Revision 50369001 (cdmlib): ref #8434 turing FeatureTree contollers into TermTree controllers
Andreas Kohlbecker
08:28 AM task #8434 (Closed): Change FeatureTree contollers to TermTree controllers
The `FeatureTree` contollers need to be adapted to the changes which have been applied for #6794:
* rename Featur...
Andreas Kohlbecker

07/31/2019

07:09 PM Revision 062686a1 (cdm-dataportal): adding missing quotes which broke the profile image
Andreas Kohlbecker
06:54 PM Revision 34852f2d (cdm-dataportal): ref #8415 using accepted name uuid to get the types if no other taxa are in the homotypical group
Andreas Kohlbecker
06:43 PM Revision 02e8615c (cdm-dataportal): refactoring cdm_dataportal_taxon_page_specimens() to compose function
Andreas Kohlbecker
05:05 PM Revision 93040e10 (taxeditor): add polytomous key generation to character matrix (experimental)
Patrick Plitzner
04:03 PM feature request #8432 (In Progress): Improve "default" feature tree handling
Andreas Müller
12:58 PM feature request #8432 (In Progress): Improve "default" feature tree handling
Definitions:
* **default feature tree** = term tree of type feature which holds all features in the database in a...
Patrick Plitzner
03:41 PM feature request #8433 (Duplicate): Disallow user names with whitespace
Allow only certain letter like [a-z][A-Z]_. Other usernames are errorprone.
Same for group names.
Andreas Müller
03:20 PM bug #6523: Correct display of misspellings in synonymy
Walter:
Also, erstmal, „orthographic variant“ gibt es anscheinend nur in der Botanik s.l.
Folgende Aussagen im C...
Andreas Müller
03:06 PM task #8405 (Rejected): Adapt cdm-vaadin to term structure changes
I deed, there is nothing to do about this in the cdm-vaadin project. Andreas Kohlbecker
03:01 PM task #8406 (Resolved): specimens and occurrence code cleaning and harmonization
Hi Katja,
can you please have a look if everything is as it was intended?
Andreas Kohlbecker
02:58 PM bug #8395 (Closed): NullPointerException (NPE) in NameCatalogueController
This is fully solved. Andreas Kohlbecker
02:57 PM task #8414 (In Progress): occurrence controller code cleaning and harmonization
Andreas Kohlbecker
02:53 PM Revision 3d14fdcf (cdm-dataportal): ref #8415 avoiding uninitialized variable
Andreas Kohlbecker
02:40 PM Revision a41f5463 (cdm-dataportal): Merge tag '5.8.2' into develop
tagging hotfix 5.8.2 Andreas Kohlbecker
02:40 PM Revision 4050c450 (cdm-dataportal): Merge branch 'hotfix/5.8.2'
Andreas Kohlbecker
02:40 PM Revision a77b6a1d (cdm-dataportal): fix #8430 fixing bbox transformation from data layer to base layer projection
Andreas Kohlbecker
02:32 PM bug #8426 (Closed): IndexOutOfBoundsException during serialization of RegistrationWorkingSet
findFirst() will returns an Optional describing the first element of this stream, or an empty Optional if the stream ... Andreas Kohlbecker
02:15 PM Revision af8e4c4e (cdmlib): ref #8414 adding cycle detection to loadFieldUnitDTO()
Andreas Kohlbecker
01:56 PM bug #8431 (In Progress): missing status bar for cdm light export
Katja Luther
10:23 AM bug #8431 (In Progress): missing status bar for cdm light export
mail from AM:
beim Export von E+M via CDM light wird bei mir seltsamer Weise keine Statusbar angezeigt, die Prozen...
Katja Luther
10:33 AM feature request #8299 (Resolved): add typification column to scientific name and homotypical group in cdm light
Applied in changeset commit:cdmlib|e05bda1e6ca35dfb77dba833f34203525024a9cb. Katja Luther
10:32 AM Revision e05bda1e (cdmlib): fix #8299: add typification columns to scientific name table of cdm light
Katja Luther
10:27 AM feature request #8344 (Resolved): Cdm light export: add dummy line in simple facts table
this is already implemented. Katja Luther
10:26 AM feature request #8322 (Resolved): add sortindex to cdm light export
yes it is already implemented, please review Katja Luther
09:04 AM bug #8430: maps zoom to wrong bbox with some layers
This should now be fixed for all situations. Could you please take a second look? Andreas Kohlbecker
08:45 AM bug #8430 (Resolved): maps zoom to wrong bbox with some layers
Applied in changeset commit:cdm-dataportal|779840f48519040a2ab59db5b7881ef0a265d6a8. Andreas Kohlbecker
08:43 AM bug #8430 (Closed): maps zoom to wrong bbox with some layers
This problem has been fixed for `POINT` maps (#8347) but is not yet fully solved for `AREA` maps.
`openlayers_map....
Andreas Kohlbecker
08:45 AM Revision 779840f4 (cdm-dataportal): fix #8430 fixing bbox transformation from data layer to base layer projection
Andreas Kohlbecker

07/30/2019

09:53 PM bug #8429: Rename DeterminationEvent_Reference.setOfReferences_id
The reason is that the references are called setOfReferences while the getter is getReferences.
Simplest solution:...
Andreas Müller
05:25 PM bug #8429 (Closed): Rename DeterminationEvent_Reference.setOfReferences_id
~~~
[algaterra_new] 2019-07-30 15:49:23,008 INFO [qtp532445947-4997] [eu.etaxonomy.cdm.remote.controller.BaseControl...
Andreas Kohlbecker
09:43 PM bug #8426: IndexOutOfBoundsException during serialization of RegistrationWorkingSet
isn't this very easy to fix? Therefore I put it to 5.9 (and also tried to fix in the meanwhile).
Open question: do...
Andreas Müller
09:40 PM bug #8426 (Resolved): IndexOutOfBoundsException during serialization of RegistrationWorkingSet
Applied in changeset commit:cdmlib|6b0f8cdfe1643a96638e02dbd924ffd0007785f8. Andreas Müller
05:09 PM bug #8426 (Closed): IndexOutOfBoundsException during serialization of RegistrationWorkingSet

IndexOutOfBoundsException during serialization of RegistrationWorkingSet:
~~~
[flora-central-africa] 2019-07-...
Andreas Kohlbecker
09:40 PM Revision ddaea59b (cdmlib): ref #8422 PolytomousKeyGenerator: improving sort order and fixing score for quantitative data, + further refactoring
Andreas Müller
09:37 PM Revision 6b0f8cdf (cdmlib): fix #8426 fix IOOB Exception in RegistrationWorkingSet serialization
Andreas Müller
05:19 PM bug #8428 (Closed): NPE in ClassificationServiceImpl.loadTreeBranchToTaxon()

~~~
[euromed] 2019-07-30 16:07:08,780 INFO [qtp532445947-5019] [eu.etaxonomy.cdm.remote.controller.ClassificationP...
Andreas Kohlbecker
05:14 PM Revision 2d0650ce (cdmlib): ref #8422 refactoring PKGenerator+test and minor fixes
Andreas Müller
05:11 PM bug #8427 (Closed): LazyInitializationException in NameController.doGetTaggedFullTitle()
found in production server log:
* /cichorieae/name/ddf9cc53-cdfc-45d5-98f9-1e5ef9a8e4df/taggedFullTitle
* /cichor...
Andreas Kohlbecker
03:27 PM feature request #8403: name page: show types specimens as expandable derivate tree
please see http://test.e-taxonomy.eu/dataportal/preview/phycobank/cdm_dataportal/name/f5048e6e-303a-41f6-933b-84c678e... Andreas Kohlbecker
11:35 AM feature request #8403 (Resolved): name page: show types specimens as expandable derivate tree
Andreas Kohlbecker
03:16 PM task #8425 (Closed): FieldUnitDTO: remove taxonRelatedDerivedUnits
FieldUnitDTO has the field `taxonRelatedDerivedUnits`. This can be removed, this is a relict of a first approach to ... Andreas Kohlbecker
03:12 PM task #8424 (New): evaluate publish flags in the full derivative path
eu.etaxonomy.cdm.remote.controller.OccurrenceController.doGetOccurencesDTO(@PathVariable(value="uuid") UUID uuid, Htt... Andreas Kohlbecker
03:01 PM bug #8423 (Closed): OccurrenceServiceImpl.findFieldUnitDTO() fails to merge derivation paths when a FieldUnit has two derivatives
OccurrenceServiceImpl.findFieldUnitDTO(DerivateDTO derivedUnitDTO, Collection<FieldUnitDTO> fieldUnits, HashMap<UUID,... Andreas Kohlbecker
02:53 PM bug #8422 (In Progress): Make PolytomousKeyGenerator work (correctly)
Andreas Müller
02:53 PM bug #8422 (Closed): Make PolytomousKeyGenerator work (correctly)
Andreas Müller
02:25 PM task #8406 (In Progress): specimens and occurrence code cleaning and harmonization
Andreas Kohlbecker
02:25 PM Revision a0be8d7e (cdm-dataportal): ref #8406 dapting portal to renamed controller endpoint: taxon/{uuid}/specimensOrObservationDTOs --> taxon/{uuid}/fieldUnitDTOs
Andreas Kohlbecker
02:22 PM Revision 2e09903a (cdmlib): ref #8414 renaming taxon/{uuid}/specimensOrObservationDTOs to taxon/{uuid}/fieldUnitDTOs
Andreas Kohlbecker
02:15 PM bug #8385: Open issues in DB preferences
Passing the ticket back to Katja. We may have a look on it together, though. Patrick Plitzner
02:14 PM feature request #8238: Allow interoperability between term trees
Does not have to be solved in this milestone -> move to 5.10 Patrick Plitzner
01:52 PM feature request #8415 (Closed): use /portal/name/{uuuid}/typeDesignationsInHomotypicalGroup to speed up type designation retrieval
Andreas Kohlbecker
01:52 PM feature request #8415 (Resolved): use /portal/name/{uuuid}/typeDesignationsInHomotypicalGroup to speed up type designation retrieval
Applied in changeset commit:cdm-dataportal|dfbc27b033a2eda86d74b57a4d14189f7d6e5cd0. Andreas Kohlbecker
01:52 PM Revision dfbc27b0 (cdm-dataportal): fix #8415 using /portal/name/{uuuid}/typeDesignationsInHomotypicalGroup service to speed up the type designation display
Andreas Kohlbecker
01:48 PM feature request #8390 (Closed): implement /portal/name/{uuuid}/typeDesignationsInHomotypicalGroup
Andreas Kohlbecker
01:46 PM Revision 7dde6846 (cdmlib): ref #8390 uncommenting typeDesignationsInHomotypicalGroup service endpoints
Andreas Kohlbecker
01:07 PM task #8414: occurrence controller code cleaning and harmonization
http://test.e-taxonomy.eu/dataportal/preview/algaterra-new/cdm_dataportal/taxon/c3350592-db9d-44cb-80ed-29bfb685e3a0/... Katja Luther
12:09 PM Revision aa8cf7e6 (cdmlib): first implementation of /portal/name/{uuuid}/typeDesignationsInHomotypicalGroup
Andreas Kohlbecker
11:35 AM bug #8421 (Rejected): icons in compose_specimen_table_top_down() are not visible
in `compose_specimen_table_top_down()` font awesome icons are added to the render array, but these are not getting di... Andreas Kohlbecker
11:28 AM task #8420 (Closed): improve admin settings for specimens representations
* The kind of representation of specimens lists needs to be selectable via a set of radio buttons.
* should the sett...
Andreas Kohlbecker
11:25 AM task #8419 (In Progress): Harmonization of the different specimen representations
**There are different kinds of "views" for specimens lists**
* some of them provide a pager others do not
* do op...
Andreas Kohlbecker
11:21 AM task #8418 (Closed): specimens and occurrence links must not have a target=_blank attribute
Andreas Kohlbecker
11:01 AM task #8418 (Closed): specimens and occurrence links must not have a target=_blank attribute
Even is this was frequently requested by users using the target attribute is in general considered an UX anti-pattern... Andreas Kohlbecker
11:02 AM Revision cea59762 (cdm-dataportal): ref #8418 removing all target=_blank attributes from specimen representations
Andreas Kohlbecker
10:18 AM Revision f7a4716c (taxeditor): ref # 8135 Make textual type designation element non-experimental
Patrick Plitzner
10:14 AM bug #8417 (New): LazyInitializationException in TermDTO for media
Im TaxonRelationshipsDTOTest, der ein einfacher UnitTest ist kommt es zu Problemen wegen der media die neuerdings an ... Patrick Plitzner
09:20 AM feature request #8412 (In Progress): Remaining issues for cdm light export (II)
Katja Luther
08:58 AM Revision ae177dac (cdm-dataportal): ref #8403 types specimens as expandable derivate tree in name page finally working
Andreas Kohlbecker
08:57 AM Revision 4c158e4e (cdm-dataportal): ref #8414 adapting portal to modified service mapping
Andreas Kohlbecker
08:44 AM Revision d2cbce25 (cdmlib): ref #8414 refactoring OccurrenceController:
- method to load a single FieldUnitDTO
- adding all intermediate derivatives to the FieldUnitDTO
- renaming servi...
Andreas Kohlbecker

07/29/2019

03:14 PM Revision df79024a (taxeditor): Adapt to model change - (DescriptiveDataSet TermTree<Feature>)
Patrick Plitzner
02:31 PM Revision f79b990b (cdmlib): Remove wildcard from generics
Patrick Plitzner
02:21 PM Revision 10858926 (cdm-dataportal): using the /portal/name/{uuuid}/typeDesignationsInHomotypicalGroup webservice to avoid fetching for each name in the group
Andreas Kohlbecker
02:20 PM Revision 961319fe (cdm-dataportal): ref #8406 clenaing and harmonization of the specimen related code in the dataportal
Andreas Kohlbecker
02:13 PM bug #8416 (Worksforme): Array to string conversion problem in render array produced for specimen page
At least the specimen page for (B B GT 0024094) in phycobank ( http://edit.test/d7/phycobank/cdm_dataportal/occurrenc... Andreas Kohlbecker
02:06 PM Revision 70b053e4 (cdmlib): ref #8406 cleaning up occurrence controller code
Andreas Kohlbecker
02:04 PM feature request #8415 (Closed): use /portal/name/{uuuid}/typeDesignationsInHomotypicalGroup to speed up type designation retrieval
copied from #6380.
This webservice should be used to speed up `type_designations_for_synonymy_group($synonymy_grou...
Andreas Kohlbecker
02:02 PM Revision dd49afb6 (cdmlib-apps): ref #6794 TermTreeNode-> TermNode in cdmlib-apps
Andreas Müller
01:59 PM task #8414 (Closed): occurrence controller code cleaning and harmonization
eu.etaxonomy.cdm.remote.controller.OccurrenceController.doGetOccurencesDTO(@PathVariable(value="uuid") UUID uuid, Htt... Andreas Kohlbecker
12:36 PM feature request #8413 (New): Abcd import with file containing list of unit ids
For a bulk import it is necessary to have the possibility to import all specimen of a list of unit IDs Katja Luther
10:36 AM bug #6627 (Resolved): Remaining cdm light issues
created a new "remaining issues" ticket and close this one Katja Luther
10:35 AM feature request #8412 (In Progress): Remaining issues for cdm light export (II)
* Instance name and instance ID
* Discuss whether we should handle the citation facts separate to the other simple...
Katja Luther
10:29 AM feature request #8411 (New): additional requirements for export/import path selection
mail from w.b.
Hallo,
ein nice to have, wohl vor allem für Leute die nicht ständig in einer Datenbank arbeiten, ...
Katja Luther

07/27/2019

01:22 AM Revision 3fcd7421 (cdmlib): fix PolytomousKeyGenerator (not yet ready)
Andreas Müller
01:22 AM Revision 90bce0d8 (cdmlib): add some factory methods
Andreas Müller
01:21 AM Revision 1ed092db (cdmlib): allow handle multiTaxon nodes in polytomousKey.print
Andreas Müller
01:20 AM Revision 8c7285ac (cdmlib): fix asList(Recursive) methods
Andreas Müller
01:19 AM Revision dc572c3e (cdmlib): adapt DescriptiveDataSet to allow also descriptive systems with features not only characters
Andreas Müller
01:18 AM Revision 21fbf707 (cdmlib): cleanup
Andreas Müller

07/26/2019

05:53 PM feature request #8410 (Closed): Add nomenclatural code edition to ruleConsidered in TaxEditor
for nomenclatural status, name relation (and hybrid relation once it exists).
Make the field only available if rul...
Andreas Müller
03:14 PM feature request #8334 (Resolved): Move sources for type designations to details view
Patrick Plitzner
03:14 PM Revision 0fcac92e (taxeditor): ref #8334 Move sources for type designations to details view
Patrick Plitzner
03:00 PM Revision 2ac060fb (taxeditor): ref #8334 code cleanup
Patrick Plitzner
02:51 PM feature request #8135 (Resolved): Implement verbatim type information in TaxEditor
Patrick Plitzner
02:50 PM Revision 577d6cf2 (taxeditor): ref #8135 Decrease text field size
Patrick Plitzner
02:47 PM Revision 6fa52600 (taxeditor): ref #8135 Remove designation checkbox from super class
Patrick Plitzner
02:38 PM bug #8365: DerivedUnitFacadeCacheStrategy should remove collection codes from accession numbers
Andreas Müller wrote:
> To me there seems to be a misunderstanding. My understanding of #8365#note-8 is that is fine...
Andreas Müller
02:19 PM bug #8365: DerivedUnitFacadeCacheStrategy should remove collection codes from accession numbers
One last question: is the original task of the ticket to deduplicate collection code if necessary now implemented in ... Andreas Müller
02:13 PM bug #8365: DerivedUnitFacadeCacheStrategy should remove collection codes from accession numbers
To me there seems to be a misunderstanding. My understanding of #8365#note-8 is that is fine to have brackets for typ... Andreas Müller
01:58 PM bug #8365: DerivedUnitFacadeCacheStrategy should remove collection codes from accession numbers
Andreas Kohlbecker wrote:
> Users frequently enter the collection code with the accession number which can cause to ...
Andreas Müller
01:50 PM feature request #8180 (In Progress): Add property term "Presence/Absence" to CDM default terms
As the current solution works for additivity maybe we should postpone creating the two new terms until the above ques... Andreas Müller
01:46 PM feature request #8180: Add property term "Presence/Absence" to CDM default terms
Query for above request:
~~~sql
SELECT REPLACE (uri, 'https://terms.tdwg.org/wiki/ft:','')
FROM DefinedTermBase...
Andreas Müller
01:31 PM feature request #8180: Add property term "Presence/Absence" to CDM default terms
Hallo,
ich sehe gerade das folgende Terme doppelt vorkommen in der Ontologie:
"REPLACE (uri, 'https://terms.tdw...
Andreas Müller
01:00 PM Revision 78c76c38 (taxeditor): ref #8238 Remove too specific generics from TermTree and TermNode
Patrick Plitzner
12:28 PM Revision 607b4f94 (cdmlib): add test to cdmlib-cache pom
Andreas Müller
11:35 AM Revision 09092e90 (taxeditor): cleanup
Andreas Müller
11:07 AM task #8166: Adapt dataportal to term structure changes
Yes, we should at least do a string search for "FeatureTree". Also a string search on "FeatureNode". Andreas Müller
09:27 AM task #8166 (New): Adapt dataportal to term structure changes
I am reopening this issue since the data portal code even if being fully functional might need to be adapted to the ... Andreas Kohlbecker
08:53 AM task #8166 (Worksforme): Adapt dataportal to term structure changes
Andreas Müller wrote:
> Are there any changes needed? Currently it looks like most things work (except maybe for the...
Andreas Kohlbecker
11:06 AM feature request #8238 (In Progress): Allow interoperability between term trees
Patrick Plitzner
11:06 AM Revision 97654d95 (cdmlib): ref #8238 Allow adding term subtypes to TermRelationBases
Patrick Plitzner
10:57 AM feature request #8409 (Closed): add nomenclatural code select to NameRelationField
see #8398 for details Andreas Kohlbecker
10:55 AM feature request #8408 (Closed): add nomenclatural code select to NomenclaturalStatusRow
see #8398 for details Andreas Kohlbecker
10:00 AM Revision 9b5133b8 (taxeditor): ref #8135 re-enable textual type designation
Patrick Plitzner
09:50 AM Revision 5405bf47 (cdmlib): fix problem in CacheLoader
Andreas Müller
09:02 AM Revision a5a2cb3d (cdmlib): Revert "Revert "update cached model for schema version 5.8""
This reverts commit 6fbe8628082d5f62797062febd0921d93708c275. Patrick Plitzner
09:01 AM Revision d6e586ac (taxeditor): Revert "Revert "update test H2 database to schema version 5.8""
This reverts commit 8b0979c778511b794d7873eda4899db15c8232f3. Patrick Plitzner
08:52 AM Revision 8b0979c7 (taxeditor): Revert "update test H2 database to schema version 5.8"
This reverts commit 50cdece7f361217c57f926555acc006a73d5e151. Patrick Plitzner
07:55 AM Revision 6fbe8628 (cdmlib): Revert "update cached model for schema version 5.8"
This reverts commit 2be44701da8b296a6ac1008376bdda834b2ffd65. Patrick Plitzner
01:55 AM Revision be95b04a (cdmlib): minor
Andreas Müller
01:46 AM Revision 5bb3ff87 (cdmlib): cleanup
Andreas Müller
01:28 AM Revision 21410a84 (cdmlib): cleanup
Andreas Müller
01:05 AM Revision 45f16cd4 (cdmlib): minor
Andreas Müller
01:00 AM Revision 5b2a2319 (cdmlib): minor
Andreas Müller
12:56 AM Revision a5d61a3f (cdmlib): minor
Andreas Müller
12:46 AM Revision f2c629ce (cdmlib): minor
Andreas Müller
12:29 AM Revision ead8847b (cdmlib): minor
Andreas Müller
12:11 AM Revision c0951a03 (cdmlib): cleanup TermTree.clone
Andreas Müller
12:11 AM Revision a08b6fbc (cdmlib): cleanup, javadoc and test for notnull check for termtype in TermTree
Andreas Müller

07/25/2019

11:13 PM task #8405: Adapt cdm-vaadin to term structure changes
Are there any changes needed? Vaadin compiles and does not really make use of TermTree(former FeatureTree) so it is m... Andreas Müller
10:16 AM task #8405 (Rejected): Adapt cdm-vaadin to term structure changes
the vaadin editor needs to be adapted to the changes applied in the context of #6794 Andreas Kohlbecker
11:10 PM task #8166: Adapt dataportal to term structure changes
Are there any changes needed? Currently it looks like most things work (except maybe for the Specimen page, is this c... Andreas Müller
05:42 PM Revision 845a6a70 (taxeditor): ref #6794 Replace FeatureTreeService with TermTreeService
Patrick Plitzner
04:20 PM Revision 53c7a226 (cdmlib): ref #6794 rename other TermTree.NewInstance methods and set old version to deprecated
Andreas Müller
04:08 PM Revision 2617ad64 (cdmlib): update javadoc for TermTree
(cherry picked from commit 14b218305dfe9023a44d8c7da6e33715a6ef4ba6) Andreas Müller
04:08 PM Revision 06de8afc (cdmlib): ref #6794 rename TermTree.NewInstance and set old version to deprecated
(cherry picked from commit 08b758e2bfba66c82fbc5a636e455edcccb9fa11) Andreas Müller
03:22 PM Revision 7a26e61a (cdmlib): ref #8407
Andreas Müller
03:21 PM Revision 98b0b483 (cdmlib): remove createDefaultFeatureTree from ITermTreeService
Andreas Müller
03:20 PM Revision 549e8cc5 (cdmlib): ref #6794 rename IFeatureTreeDao in ITermTreeDao
Andreas Müller
02:54 PM task #8336 (Duplicate): Unignore FeatureTest
Andreas Müller
02:50 PM bug #8407 (New): Fix "FeatureTest"
Fix "FeatureTest" (or may now TermTreeTest) which checks the correkt behavior for exporting (and importing?) TermTree... Andreas Müller
01:45 PM Revision 160f1cbd (taxeditor): ref #6794 Fix compile error
Patrick Plitzner
01:16 PM task #8406 (Closed): specimens and occurrence code cleaning and harmonization
## cdmlib-remote
issues copied to #8414
## data portal
* There are different kinds of "views" on specimens l...
Andreas Kohlbecker
12:51 PM Revision ca7468b6 (cdm-dataportal): ref #8403 moving compose_specimens_table_bottom_up() to occurences.inc and renaming parameter in compose_specimen_array()
Andreas Kohlbecker
12:48 PM Revision 84849c31 (cdm-dataportal): ref #8403 extracting method compose_specimens_table_bottom_up()
Andreas Kohlbecker
12:27 PM Revision 8b7ea5be (taxeditor): ref #8281 adapt TaxEditor test data to doubtful flag in TaxonNode
Andreas Müller
12:25 PM Revision 43613a08 (taxeditor): ref #7334 adapt TaxEditor tests to new schema (delete partial and proparte)
Andreas Müller
11:15 AM Revision 68467d82 (cdm-dataportal): name type designation status bold - adapting tests
Andreas Kohlbecker
11:15 AM Revision 6cf1445b (cdm-vaadin): adapt vaadin tests to new schema version
Andreas Müller
11:10 AM Revision ad0a82ca (cdm-vaadin): adapt vaadin tests to new schema version
Andreas Müller
11:04 AM Revision 1f00087f (cdm-dataportal): name type designation status bold
Andreas Kohlbecker
11:03 AM Revision c8e1c376 (cdm-vaadin): adapt vaadin tests to new schema version
Andreas Müller
10:53 AM Revision 0f8bf4e9 (cdm-vaadin): update vaadin test H2 to new schema version 5.8
Andreas Müller
10:25 AM Revision 2d6c8502 (cdmlib): commenting doGetTypeDesignationsInHomotypicalGroup() methods which have been comitted too early
Andreas Kohlbecker
10:17 AM Revision 2be44701 (cdmlib): update cached model for schema version 5.8
Andreas Müller
10:17 AM Revision 049213b6 (cdmlib): cleanup
Andreas Müller
10:13 AM bug #8395 (Resolved): NullPointerException (NPE) in NameCatalogueController
Applied in changeset commit:cdmlib|dd4347b628d5737e2682c8d95fcb0e1aff9e7ad7. Andreas Kohlbecker
10:13 AM Revision 10d502dc (cdmlib): ref #8394 adding nameUUIDs to NameCatalogueController responses
Andreas Kohlbecker
10:13 AM Revision 9c5bef97 (cdmlib): ref #8394 adding nameUuid to NameCatalogueController responses
Andreas Kohlbecker
10:13 AM Revision dd4347b6 (cdmlib): fix #8395 avoiding NPE in NameCatalogueController.getDatasetIdName()
Andreas Kohlbecker

07/24/2019

08:13 PM Revision 50cdece7 (taxeditor): update test H2 database to schema version 5.8
Andreas Müller
08:10 PM Revision cb89f4f7 (taxeditor): ref #6794 adapt TaxEditor to new term structure (rename FeatureNode and FeatureTree)
Andreas Müller
07:50 PM feature request #8404 (Resolved): Add update step list within updaters
Andreas Müller
04:23 PM feature request #8404 (Closed): Add update step list within updaters
currently it is needed to add the step externaly to the step list which leads to errors and requires unnecessary code Andreas Müller
07:50 PM feature request #8281 (Resolved): Doubtful flag for TaxonNode
still need to update E+M data Andreas Müller
07:49 PM bug #4884 (Resolved): Update Reference_AUD.refType to allow NULL
Andreas Müller
07:48 PM feature request #8398 (Resolved): Add nomenclatural code edition to ruleConsidered
Applied in changeset commit:cdmlib|3b49c84a0287d1f78acb49ff1270a38c679cfd3a. Andreas Müller
07:44 PM Revision 973dce58 (cdmlib): update H2 test DB
Andreas Müller
07:37 PM Revision bd62ef07 (cdmlib): ref #7470 update script correct keys for TextualTypeDesignation_LanguageString
Andreas Müller
07:36 PM Revision 856dffcf (cdmlib): ref #8404 further cleanup for stepList integration
Andreas Müller
07:34 PM Revision f628f668 (cdmlib): ref #7470 add TextualTypeDesignation to FullCoverageDataGenerator and add Adder to TaxonName
Andreas Müller
06:13 PM Revision d9b56bd4 (cdmlib): ref #4884 allow null for Reference_AUD.refType
Andreas Müller
06:12 PM Revision 68768f85 (cdmlib): ref #4884 unify datatype handling in schema updaters
Andreas Müller
06:11 PM Revision 956f26a0 (cdmlib): cleanup
Andreas Müller
05:15 PM Revision 975de0cc (cdm-vaadin): ref #8397 adding default status message as hint to phycobank index
Andreas Kohlbecker
05:09 PM Revision 30e50105 (cdm-vaadin): adding default status message as hint to phycobank index
Andreas Kohlbecker
04:24 PM Revision 99e01f35 (cdmlib): ref #8404 Add update step list within updaters
Andreas Müller
02:56 PM feature request #8402 (Closed): ordering typedesignations in name and taxon page
Andreas Kohlbecker
02:56 PM feature request #8402 (Resolved): ordering typedesignations in name and taxon page
Applied in changeset commit:cdm-dataportal|fb939fdc818762b23215321ff183be8700e88161. Andreas Kohlbecker
02:56 PM Revision fb939fdc (cdm-dataportal): fix #8402 fixing broken type designatin compare function
Andreas Kohlbecker
02:55 PM Revision 6e2c4f1a (cdm-dataportal): fix 8402 fixing broken type designatin compare function
Andreas Kohlbecker
02:45 PM Revision 9c12cb7f (cdm-dataportal): name type designation status bold
Andreas Kohlbecker
01:07 PM Revision 2154d631 (cdm-dataportal): typedesignation status and registered name bold also in name page
Andreas Kohlbecker
12:18 PM task #8363 (Worksforme): PESI SOAP service seems to return duplicate records
It turned out that the duplicates are not in the PESI response but that they an effect of an error in the downstram p... Andreas Kohlbecker
12:02 PM task #8363: PESI SOAP service seems to return duplicate records
I introduced this while I was working on the ticket overview page for Phycobank: https://dev.e-taxonomy.eu/redmine/pr... Andreas Kohlbecker
10:27 AM task #8363: PESI SOAP service seems to return duplicate records
Interesting that the UTIS project has a category utis ;-) Andreas Müller
12:01 PM Revision 9cb9a9cf (cdmlib): #8398 add botanical codes prior to 1990
Andreas Müller
11:45 AM Revision 39cb02e8 (cdmlib): minor
Andreas Müller
11:45 AM Revision 7b9ed797 (cdmlib): ref #7334 remove TaxonBase.proParte and partial and ref #8398 add codeEditon to nomStatus and nameRelations
Andreas Müller
11:24 AM Revision c5564cac (cdmlib): ref #6794 remove FeatureNodeService from BatchValidationUtil
Andreas Müller
11:20 AM Revision d10ceac8 (cdmlib): ref #6794 delete FeatureDao
Andreas Müller
11:14 AM Revision 62779ba1 (cdmlib): ref #6794 javadoc update FeatureTree -> TermTree
Andreas Müller
11:13 AM Revision cf4196d1 (cdmlib): ref #6794 some adaptations in Jaxb to FeatureTree -> TermTree
Andreas Müller
11:12 AM Revision 36fc6b9d (cdmlib): ref #6794 adapt jsonConfigurations.xml from FeatureTree/Node -> TermTree/Node
Andreas Müller
11:11 AM Revision 85bfea3a (cdmlib): ref #6794 add TermTreeService and TermNodeService to httpInvokerServices
Andreas Müller
11:10 AM Revision f9e5c38d (cdmlib): ref #6794 remove FeatureTree from some hibernate.cfgs again
Andreas Müller
11:08 AM Revision 1ac56bd8 (cdmlib): ref #8281 add doubtful to TaxonNode (remaining)
Andreas Müller
11:06 AM Revision 7c2426b5 (cdmlib): remove uplaced, excluded, partial and proparte from TaxonBase test data
Andreas Müller

07/23/2019

10:17 PM Revision 4f16dfd5 (cdmlib): ref #8281 add doubtful to TaxonNode
Andreas Müller
08:42 PM Revision 3b49c84a (cdmlib): fix #8398 add nomenclatural code edition to nomStatus, NameRelationship and HybridRelationship and make RuleConsidered an embedded class
Andreas Müller
08:39 PM Revision ec4afe76 (cdmlib): fix potential NPE in GatheringEvent.clone
Andreas Müller
08:38 PM Revision 54fefe54 (cdmlib): cleanup
Andreas Müller
06:45 PM Revision 445df273 (cdm-dataportal): typedesignation status and registered name bold
Andreas Kohlbecker
06:38 PM Revision ac31a390 (cdm-dataportal): adding PESI as commented provider option
Andreas Kohlbecker
06:37 PM Revision c040bba0 (cdm-dataportal): adding margin to name page name
Andreas Kohlbecker
06:03 PM feature request #8403 (Rejected): name page: show types specimens as expandable derivate tree
In the name page, type specimens used in type designations should be expandable like in the taxon page Andreas Kohlbecker
05:58 PM feature request #8402 (Closed): ordering typedesignations in name and taxon page
The typedesignation in the name and taxon page are not yet well ordered. The sort order should follow the order of th... Andreas Kohlbecker
04:39 PM bug #6523: Correct display of misspellings in synonymy
Guten Morgen,

ich bin hinsichtlich einer endgültigen Lösung leidenschaftslos und kann nicht mit eigenen Vorschläg...
Andreas Kohlbecker
04:15 PM bug #8400 (Closed): scientific names in Aphia client responses are missing authors citation
Andreas Kohlbecker
03:49 PM bug #8400 (Closed): scientific names in Aphia client responses are missing authors citation
Andreas Kohlbecker
04:14 PM bug #8401 (Closed): WoRMS client returns synonym for accepted name
Andreas Kohlbecker
04:14 PM bug #8401 (Resolved): WoRMS client returns synonym for accepted name
Applied in changeset commit:utis-core|b2cf9c25798fa510b3eda5b8d77630e1da1e9072. Andreas Kohlbecker
03:58 PM bug #8401 (Closed): WoRMS client returns synonym for accepted name
Andreas Kohlbecker
04:14 PM Revision b2cf9c25 (utis-core): fix #8401 using accepted name id
Andreas Kohlbecker
04:12 PM feature request #8355 (Closed): implement client adapter for phycobank
Andreas Kohlbecker
04:12 PM Revision e2d4f39c (utis-core): ref #8400 adding missing authorship information to names
Andreas Kohlbecker
04:09 PM feature request #8360 (Worksforme): paging results of /classification/{taxonId}/children webservice
this has been solved in bug #6151 Andreas Kohlbecker
04:06 PM bug #6151 (Closed): implement pager for search service
Andreas Kohlbecker
03:33 PM feature request #7975: Implement a block to display name relations
Andreas Kohlbecker wrote:
> In the developer standup today we almost already decided for adding an enumeration field...
Andreas Kohlbecker
03:31 PM bug #8399 (New): show nomenclatural code edition for NameRelationship and NomenclaturalStatus
see #7975#note-31 for details Andreas Kohlbecker
01:27 PM feature request #8398 (Closed): Add nomenclatural code edition to ruleConsidered
copied from #7975#note-31 :
"... adding an enumeration field to NameRelationship and to NomenclaturalStatus to al...
Andreas Müller
01:20 PM feature request #6794 (In Progress): Improve term structure
Andreas Müller
11:27 AM feature request #8396 (New): make "not in classification warning" configurable

once completed remove
~~~css
.messages--warning {
display: none;
}
~~~
from phycobank portal
Andreas Kohlbecker
11:24 AM task #8392: Types in PhycoBank
the type status in the name page should be bold but
~~~css
.node-cdm-name .typeDesignations .status {
font-wei...
Andreas Kohlbecker
07:20 AM Revision c5710844 (utis-core): PhycobankClient linking to dataportal name page, ref #8394
Andreas Kohlbecker

07/22/2019

06:42 PM Revision cbfdd05c (cdmlib): ref #6794 ignore FeatureTest
Andreas Müller
06:42 PM Revision d9fa828c (cdmlib): cleanup
Andreas Müller
06:41 PM Revision 2f72f4da (cdmlib): ref #6794 add TermNodeService and TermTreeService and make FeatureXXX services deprecated
Andreas Müller
06:39 PM Revision eb9880a0 (cdmlib): ref #6794 rename some parameters, methods and classes
Andreas Müller
06:13 PM Revision 15baf16b (utis-core): AbstractCdmServerClient responses with taxon.url, ref #8394 - switching back to production server
Andreas Kohlbecker
06:06 PM Revision b761d7d6 (utis-core): AbstractCdmServerClient responses with taxon.url, ref #8394
Andreas Kohlbecker
06:05 PM Revision 36386216 (cdm-dataportal): ref #8388 UTIS search block: switching to production system for UTIS
Andreas Kohlbecker
06:03 PM Revision e27e3ff2 (cdm-dataportal): ref #8388 UTIS search block: linking to taxon urls
Andreas Kohlbecker
03:23 PM bug #8395 (Closed): NullPointerException (NPE) in NameCatalogueController
This NPE problem currently breaks searching for "Planothidium" in phycobank via UTIS
~~~
Caused by: java.lang.Nu...
Andreas Kohlbecker
03:19 PM feature request #8394 (New): org.cybertaxonomy.utis.tnr.msg.TaxonName add URL field
For phycobank and other name focused data providers it is crucial that the name url and identifier can be transported... Andreas Kohlbecker
02:42 PM feature request #8180 (Feedback): Add property term "Presence/Absence" to CDM default terms
Patrick Plitzner
01:38 PM Revision 11bdf5c4 (cdmlib): ref #6794 rename TermTreeNode -> TermNode
Andreas Müller
01:37 PM Revision 77dad5ec (cdmlib): ref #6794 rename getFeatureNode -> getTermNode in cdmlib-print
Andreas Müller
01:35 PM Revision 41061791 (cdmlib): ref #6794 rename TermTreeNode -> TermNode
Andreas Müller
01:32 PM Revision 10ae9cf0 (cdmlib): ignore ConfigFileUtilTest.testGetFolderSeperator
Andreas Müller
01:31 PM Revision 76463827 (cdmlib): ref #6794 rename TermTreeNode -> TermNode
Andreas Müller
12:23 PM Revision cd1003b3 (cdm-dataportal): Merge tag '5.8.1' into develop
tagging hotfix 5.8.1 Andreas Kohlbecker
12:22 PM Revision 485045db (cdm-dataportal): Merge branch 'hotfix/5.8.1'
Andreas Kohlbecker
12:13 PM Revision 85669a85 (cdm-dataportal): ref #7975 implementing settings for name relationship lists - all name rels enabled by default
Andreas Kohlbecker
12:08 PM Revision 74b1edb3 (cdm-dataportal): ref #8347 fixing wrong projection transformation for data maps - improved version
Andreas Kohlbecker
08:28 AM feature request #8390 (In Progress): implement /portal/name/{uuuid}/typeDesignationsInHomotypicalGroup
Andreas Kohlbecker
08:05 AM bug #8393 (New): restarting utis-webapp causes OverlappingFileLockException
This happens after changing the last updated timestamp of the '/etc/jetty8/contexts/eubon-utis-1.3.xml'
~~~
java....
Andreas Kohlbecker
07:48 AM bug #8340 (New): is accepted for Footnotes missing and with wrong index
I think there is nothing to do about this ticket as long #8339 is not decided by 100%. Andreas Kohlbecker

07/19/2019

11:28 PM Revision 3af337bb (cdmlib): ref #6794 finalize FeatureTreeMover (update treeindex)
Andreas Müller
11:19 PM Revision d621df66 (cdmlib): minor
Andreas Müller
10:24 PM Revision 74d92b60 (cdmlib): ref #6794 minor adaptations of tests
Andreas Müller
09:13 PM Revision 40b05355 (cdmlib): ref #6794 remove duplicate TermRelationshipType in test/hibernate.cfg.xml
Andreas Müller
09:03 PM Revision ab5b84ab (cdmlib): ref #6794 remove FeatureTree from hibernate.cfg
Andreas Müller
08:57 PM Revision 0774bb03 (cdmlib): ref #6794 remove FeatureTree class
Andreas Müller
08:45 PM Revision 3048fbc9 (cdmlib): ref #6794 add TermRelation and rename FeatureNode -> TermTreeNode
ref #6794 add TermRelation and TermRelationBase Andreas Müller
08:42 PM Revision 17ad77a7 (cdmlib): ref #6794 add TermRelation and rename FeatureNode -> TermTreeNode
Andreas Müller
08:42 PM Revision b996fc8c (cdmlib): cleanup and ref #6794 rename TermTreeDaoImpl
Andreas Müller
08:42 PM Revision 645aca37 (cdmlib): ref #6794 add TermCollection and subclasses including TermTree
Andreas Müller
08:42 PM Revision 12740fe1 (cdmlib): ref #6794 change FeatureTree to TermTree
Andreas Müller
08:42 PM Revision 0d80c92f (cdmlib): ref #6794 add TermRelation and rename FeatureNode -> TermTreeNode
Andreas Müller
08:41 PM Revision e793a739 (cdmlib): ref #6794 update some imports to model changes and add ITermTree
Andreas Müller
06:14 PM Revision cf862eed (cdmlib): ref #6794 FeatureTreeMover first implementation (not yet ready)
Andreas Müller
06:14 PM Revision b153def6 (cdmlib): minor
Andreas Müller
06:14 PM Revision a2533432 (cdmlib): ref #6794 change schema version and add missing attributes to updateScript
Andreas Müller
06:14 PM Revision 0d79c535 (cdmlib): ref #6794 remove references to TermVocabulary.iterator()
Andreas Müller
06:14 PM Revision b61431ee (cdmlib): ref #8336 ignore FeatureTest
Andreas Müller
06:14 PM Revision 94907e20 (cdmlib): ref #6794 adapt TermCollection test data to boolean values in TermCollection
Andreas Müller
06:14 PM Revision 5ed46cc2 (cdmlib): add SchemaUpdater_55_58
Andreas Müller
06:14 PM Revision def33852 (cdmlib): ref #6794 add TermCollection and subclasses including TermTree
Andreas Müller
06:14 PM Revision b72678a6 (cdmlib): ref #6794 change FeatureTree to TermTree
Andreas Müller
06:14 PM Revision ec978653 (cdmlib): ref #6794 add TermRelation and rename FeatureNode -> TermTreeNode
Andreas Müller
06:14 PM Revision 18dfe77e (cdmlib): ref #6794 move term relations down to TermCollection
Andreas Müller
06:14 PM Revision 502547d1 (cdmlib): ref #6794 fix FeatureNodeServiceImplTest
Andreas Müller
06:14 PM Revision 810bbc08 (cdmlib): revert ClearDBDataSet to BlankDataSet to avoid foreign key problems during test data creation in SDDImportTest
Andreas Müller
06:14 PM Revision 4e5c4e73 (cdmlib): cleanup and ref #6794 rename TermTreeDaoImpl
Andreas Müller
06:14 PM Revision c27ce9cc (cdmlib): ref #6794 update script for graph_id and root_id
Andreas Müller
06:14 PM Revision 0761f817 (cdmlib): replace BlankDataSet.xml by ClearDBDataSet.xml
Andreas Müller
06:14 PM Revision 0d603043 (cdmlib): cleanup
Andreas Müller
06:14 PM Revision 1cc29785 (cdmlib): ref #6794 adjust hibernate configuration to new TermCollection and adjust test data
Andreas Müller
06:14 PM Revision 11df83d8 (cdmlib): ref #6794 add TermCollection and subclasses including TermTree
Andreas Müller
06:14 PM Revision b3340748 (cdmlib): ref #6794 change FeatureTree to TermTree
Andreas Müller
06:14 PM Revision 4b1a00be (cdmlib): ref #6794 update script for name changes in FeatureNode and TermVocabulary
Andreas Müller
06:13 PM Revision 2a933a18 (cdmlib): adapt SchemaUpdater to v5.5.1
Andreas Müller
06:13 PM Revision 3c06156c (cdmlib): ref #6794 rename TermVocabulary table to TermCollection and remaining rename FeatureNode -> TermTreeNode
Andreas Müller
06:13 PM Revision 3de5dbd5 (cdmlib): update service/dataset.xsd location
Andreas Müller
06:13 PM Revision 951c829f (cdmlib): ref #6794 add TermRelation and rename FeatureNode -> TermTreeNode
Andreas Müller
06:13 PM Revision 1c313fd1 (cdmlib): ref #6794 add TermRelation and TermRelationBase
Andreas Müller
06:13 PM Revision aa929473 (cdmlib): ref #6794 add term relation type to TermType and fix TermRelationType class
Andreas Müller
06:13 PM Revision 6645143a (cdmlib): ref #6794 adapt TermsDataSet-with_auditing_info in some packages after merge problem solved
Andreas Müller
06:13 PM Revision 28fc4fe7 (cdmlib): ref #8128 comment changes temporarily to make them compile
Andreas Müller
06:13 PM Revision cafaa5dd (cdmlib): ref #6794 add TermRelationshipType to test data
Andreas Müller
06:13 PM Revision 7c4fffcd (cdmlib): ref #6794 add TermRelationshipType
Andreas Müller
06:13 PM Revision 2f8559af (cdmlib): cleanup
Andreas Müller
06:13 PM Revision cf792057 (cdmlib): ref #7514 adapt MAN symbol to portal tests
Andreas Müller
06:13 PM Revision ae1cff7e (cdmlib): preparation for Feature.supportedClasses
Andreas Müller
06:13 PM Revision c220794b (cdmlib): ref #7514 update misapplied name symbols again
Andreas Müller
06:13 PM Revision ba7d0c9a (cdmlib): Add SchemaUpdater_55_551
Andreas Müller
04:38 PM bug #8340: is accepted for Footnotes missing and with wrong index
Don't know what kind of feedback is needed from my side? Andreas Müller
04:27 PM feature request #8134: Implement verbatim type information in dataportal
related to issues in 5.9 so maybe we can implement it then Andreas Müller
04:13 PM feature request #8354: taxonomic registration search by name finds also typifications for this name
correct! Andreas Kohlbecker
03:53 PM feature request #8354: taxonomic registration search by name finds also typifications for this name
to me seems to be a cdmlib ticket, not cdm Andreas Müller
04:12 PM task #7296: externalize redmine api key
it is! The changes have been made in `cdmlib-ext/src/test/resources/services-external.properties` Andreas Kohlbecker
03:55 PM task #7296: externalize redmine api key
this is not a cdm ticket, please change category if cdmlib is also not correct Andreas Müller
03:30 PM Revision 2674d5ca (cdm-server): Merge branch 'release/5.8.0' into develop
jenkins
03:30 PM Revision 947103be (cdm-server): jenkins merging release branch into master (strategy: theirs)
jenkins
03:29 PM Revision a00fbdfa (cdm-server): updating poms for branch'release/5.8.0' with non-snapshot versions
jenkins
03:28 PM Revision 45444313 (cdm-webapp): Merge branch 'release/5.8.0' into develop
jenkins
03:28 PM Revision 82e5eca3 (cdm-webapp): jenkins merging release branch into master (strategy: theirs)
jenkins
03:28 PM Revision 80b60b0b (cdm-webapp): updating poms for branch'release/5.8.0' with non-snapshot versions
jenkins
03:28 PM Revision e2ea078b (cdm-webapp): jenkins bumping cdmlib.version and cdm.vaadin.version to 5.8.0
jenkins
03:27 PM bug #6627 (Feedback): Remaining cdm light issues
should we close this ticket and create a new remaining (II) ticket with the now open issues.
Most of the tasks hav...
Andreas Müller
03:19 PM Revision 598fbcc2 (cdm-dataportal): Merge branch 'release/5.8.0' into develop
jenkins
03:19 PM Revision 1e0c0555 (cdm-dataportal): updating poms for branch'release/5.8.0' with non-snapshot versions
jenkins
03:18 PM Revision 07bb851f (cdm-dataportal): release-preparation: production level css
jenkins
03:18 PM Revision 8e8cd135 (cdm-vaadin): Merge branch 'release/5.8.0' into develop
jenkins
03:18 PM Revision f7afd110 (cdm-vaadin): jenkins merging release branch into master (strategy: theirs)
jenkins
03:15 PM Revision e7aa1173 (cdm-vaadin): updating poms for branch'release/5.8.0' with non-snapshot versions
jenkins
03:15 PM Revision 6bd46cc3 (cdm-vaadin): jenkins bumping cdmlib.version to 5.8.0
jenkins
03:14 PM Revision 3c373afd (taxeditor): Merge branch 'release/5.8.0' into develop
jenkins
03:14 PM Revision 0645911c (taxeditor): Merge branch 'release/5.8.0'
jenkins
03:13 PM feature request #8273 (Feedback): abcd import: check for all specimen for DNA in DNABank
Is this already implemented? It has a commit. Andreas Müller
03:12 PM Revision f50c5671 (cdmlib): Updating develop poms back to pre merge state
jenkins
03:12 PM Revision 51a0fa9a (cdmlib): Merge branch 'master' into develop
jenkins
03:12 PM Revision d10f48ed (cdmlib): updating develop poms to master versions to avoid merge conflicts
jenkins
03:11 PM Revision 79e62164 (cdmlib): Merge branch 'release/5.8.0'
jenkins
03:11 PM feature request #8322 (Feedback): add sortindex to cdm light export
Isn't this already implemented. Review? Andreas Müller
03:08 PM bug #8088 (Feedback): Open taxon node wizard issues
can we close this and create a new ticket with open issues? There are already several commits on this ticket.
Let me...
Andreas Müller
03:07 PM feature request #8182: show blast search result
is this ready or should we create ticket for open issues? Andreas Müller
03:04 PM feature request #8388 (Closed): UTIS search block
completed Andreas Kohlbecker
03:04 PM feature request #8344 (In Progress): Cdm light export: add dummy line in simple facts table
is this fixed already? Please move to 5.10 if not Andreas Müller
02:58 PM bug #8313: Multiple categorical data get deleted when clicked on in Character Matrix
Move back to 5.8 as this seems to be ready in 5.8 milestone Andreas Müller
02:52 PM Revision 2e017144 (cdmlib): updating poms for branch'release/5.8.0' with non-snapshot versions
jenkins
02:49 PM Revision 1ec5ac22 (cdm-dataportal): ref #8388 UTIS search block: handling empty records and feedback on no results
Andreas Kohlbecker
02:48 PM Revision 1861c83d (cdm-dataportal): ref #8388 UTIS search block: handling empty records and feedback on no results
Andreas Kohlbecker
02:29 PM Revision 3b9b1523 (cdm-webapp): jenkins bumping cdmlib.version and cdm.vaadin.version to 5.8.0-SNAPSHOT
jenkins
02:29 PM Revision be362251 (cdm-webapp): updating poms for 5.9.0-SNAPSHOT development
jenkins
02:28 PM Revision 7071ef95 (cdm-webapp): jenkins bumping cdmlib.version and cdm.vaadin.version to 5.9.0-SNAPSHOT
jenkins
02:27 PM Revision 0809fa50 (cdm-vaadin): jenkins bumping cdmlib.version to 5.8.0-SNAPSHOT
jenkins
02:26 PM Revision 3f0ec1ee (cdm-vaadin): updating poms for 5.9.0-SNAPSHOT development
jenkins
02:26 PM Revision e919d9f8 (cdm-vaadin): updating poms for 5.8.0 branch with snapshot versions
jenkins
02:26 PM Revision 7de1009c (cdm-vaadin): jenkins bumping cdmlib.version to 5.9.0-SNAPSHOT
jenkins
02:26 PM Revision 834c0fd2 (cdm-server): updating poms for 5.9.0-SNAPSHOT development
jenkins
02:19 PM task #8392 (Worksforme): Types in PhycoBank
>This layout is okay except of the dot at the end. If special types are concatenated ".;" should be avoided.
This ...
Wolf-Henning Kusber
02:16 PM task #8391 (In Progress): Name page shows complete name information (II)
Andreas Müller
02:11 PM task #8391 (In Progress): Name page shows complete name information (II)
Continue #8108:
Remaining issues:

2. Inhaltlich sollten folgende Angaben zu sehen sein:
* ~~Taxa~~
...
Andreas Müller
02:13 PM feature request #8108 (Resolved): Name page shows complete name information (I)
copied remaining issues to new ticket to review and close this ticket for current milestone. Andreas Müller
02:03 PM Revision 909ca8e0 (taxeditor): Updated version in pom / project files to taxeditor version : 5.9.0-SNAPSHOT and cdmlib version : 5.9.0-SNAPSHOT
jenkins
02:03 PM Revision 076f3a94 (taxeditor): Updated version in pom / project files to taxeditor version : 5.8.0 and cdmlib version : 5.8.0
jenkins
02:03 PM Revision d1eb8075 (cdm-vaadin): updating poms for 5.9.0-SNAPSHOT development
jenkins
02:03 PM Revision 6a1b9a03 (cdm-vaadin): updating poms for 5.8.0 branch with snapshot versions
jenkins
02:02 PM Revision 0abb074a (cdm-vaadin): jenkins bumping cdmlib.version to 5.9.0-SNAPSHOT
jenkins
02:02 PM Revision 33dbd082 (cdm-dataportal): updating poms for 5.9.0-SNAPSHOT development
jenkins
01:59 PM Revision 01423b1e (cdmlib): updating poms for 5.9.0-SNAPSHOT development
jenkins
01:43 PM bug #6523 (In Progress): Correct display of misspellings in synonymy
Andreas Müller
10:55 AM bug #6523: Correct display of misspellings in synonymy
@Walter: could you please check if Nepenthes tupmanniana is really meant to be a misspelling or is it rather a homony... Andreas Müller
10:53 AM bug #6523: Correct display of misspellings in synonymy
Hallo,
danke Henning für die Hinweise. Ich nehme mal einige weitere Leute mit ins Ticket, da dies sowohl von allge...
Andreas Müller
01:38 PM Revision 24bff82e (cdm-dataportal): ref #8388 UTIS search block: better labels for providers
Andreas Kohlbecker
12:21 PM Revision bcb1dad5 (cdm-dataportal): ref #7975 implementing settings for name relationshiop lists - removing filter and offering all relation types
Andreas Kohlbecker
12:10 PM Revision a4f9d5b0 (cdm-dataportal): ref #7975 implementing settings for name relationshiop lists; new name page layout settings section
Andreas Kohlbecker
11:40 AM feature request #8304: Name page redirects to according taxon depending on query parameter
I don't think that these requirements are contradict the current implementation with the 'global' switch. As far as I... Andreas Kohlbecker
11:30 AM feature request #8304: Name page redirects to according taxon depending on query parameter
As far as I remember there is already a user request for this. At least I have discussed it with users.
Also I thin...
Andreas Müller
09:31 AM bug #6380 (Closed): typedesignations missing in homotypic group
Andreas Kohlbecker
09:30 AM bug #6380: typedesignations missing in homotypic group
Andreas Müller wrote:
> Until then why can't we use a ws call that collects all type designations of a single name i...
Andreas Kohlbecker
09:08 AM bug #6380: typedesignations missing in homotypic group
Until then why can't we use a ws call that collects all type designations of a single name in the homotypic group for... Andreas Müller
08:49 AM bug #6380: typedesignations missing in homotypic group
Andreas Müller wrote:
> The result seems to be correct. Do I understand the code correctly that you only call 1 webs...
Andreas Kohlbecker
08:04 AM bug #6380 (Feedback): typedesignations missing in homotypic group
The result seems to be correct. Do I understand the code correctly that you only call 1 webservice per homotypical gr... Andreas Müller
09:29 AM feature request #8390 (Closed): implement /portal/name/{uuuid}/typeDesignationsInHomotypicalGroup
copied from #6380.
This webservice should be used to speed up `type_designations_for_synonymy_group($synonymy_grou...
Andreas Kohlbecker
09:13 AM feature request #7932: Implement subject resolver for CdmPreferences
Andreas Kohlbecker wrote:
> Andreas Müller wrote:
> > Andreas K., do you already use the subject resolver in the pr...
Andreas Müller
08:32 AM feature request #7932: Implement subject resolver for CdmPreferences
Andreas Müller wrote:
> Andreas K., do you already use the subject resolver in the preference cache you use for vaad...
Andreas Kohlbecker
09:11 AM task #4177 (Closed): display of name relationships in synonymy broken
Andreas Kohlbecker
08:33 AM task #4177 (Feedback): display of name relationships in synonymy broken
So if this ticket is not about the comments in #note-3 and #note-4 but only about repairing and optimizing the name r... Andreas Müller
08:05 AM Revision 502063b4 (cdm-dataportal): fixing broken link in settings
Andreas Kohlbecker

07/18/2019

10:41 PM Revision 579bc6e3 (cdm-dataportal): ref #8388 UTIS search block: fixing layout bug
Andreas Kohlbecker
08:49 PM feature request #7920: Possibility to define area specific status selection
An open issue is that it should also be available for local prefs (where it is maybe more difficult to implement beca... Andreas Müller
06:40 PM feature request #7920 (Feedback): Possibility to define area specific status selection
To me this looks like being solved including the open issues. Please check and move open issues to a new ticket if ne... Andreas Müller
08:46 PM feature request #8045: Improve handling of default values and override in local preferences
with the new implementation of distribution status with different subjects if allowOverride=false in DB prefs this do... Andreas Müller
08:04 PM feature request #8045: Improve handling of default values and override in local preferences
For the above issues see also #8323#note-4 Andreas Müller
04:21 PM feature request #8045: Improve handling of default values and override in local preferences
Andreas Müller wrote:
> Choosing "default" for local preference "nomenclatural status" has no effect. It uses the ex...
Andreas Müller
01:26 PM feature request #8045: Improve handling of default values and override in local preferences
For nomencl.Code. implementation is still missing or incorrect. Also we may discuss if in DB prefs we should allow "U... Andreas Müller
01:09 PM feature request #8045: Improve handling of default values and override in local preferences
Choosing "default" for local preference "nomenclatural status" has no effect. It uses the explicitly chosen values fr... Andreas Müller
01:06 PM feature request #8045 (Feedback): Improve handling of default values and override in local preferences
Looks like this has been implemented in 5.8 so I switch milestone.
Are there open issues?
Andreas Müller
08:30 PM bug #8389 (Resolved): Correct handling of default values with allowOverride=false
It looks like currently the preferences are deleted no matter what the allowOverride value is. But if it is "false" s... Andreas Müller
08:10 PM bug #8385: Open issues in DB preferences
the above both fixes seem to work (though the last is only a workaround for a real fix (full delete of the preference)) Andreas Müller
05:55 PM bug #8385: Open issues in DB preferences
Patrick Plitzner wrote:
> Wouldn't it be better to just delete the preference if the config is `null`. `null` means...
Patrick Plitzner
05:54 PM bug #8385: Open issues in DB preferences
Andreas Müller wrote:
> >io.ABCD.config is stored in DB with value NULL even if nothing has changed, if this is defa...
Patrick Plitzner
04:33 PM bug #8385: Open issues in DB preferences
>io.ABCD.config is stored in DB with value NULL even if nothing has changed, if this is default value, the default sh... Andreas Müller
01:45 PM bug #8385: Open issues in DB preferences
After setting Publish Flag to default and reopening:
~~~
login : admin
editor version : 5.8.0.201907180811
serv...
Andreas Müller
01:39 PM bug #8385: Open issues in DB preferences
Patrick, can you have a look? Andreas Müller
01:34 PM bug #8385 (Closed): Open issues in DB preferences
* ~~Values on General page (Export/Import, Checklist perspective, Taxonnode Wizard) are not loaded correctly when reo... Andreas Müller
07:54 PM feature request #8256: Show all status preferences as table
CRITICAL:
Updating an existing list does not seem to work anymore. If I update and reopen the dialog everything is...
Andreas Müller
07:04 PM feature request #8256 (Feedback): Show all status preferences as table
By the way: if no area is selected the subject is /taxeditor which does not make much sense. It should be only "/". A... Andreas Müller
06:53 PM feature request #8256: Show all status preferences as table
In general this seems to work and is a great feature. Some minor issues: the table should show up below the status se... Andreas Müller
07:32 PM feature request #8323: Make nom.status and rank lists a CdmPreference
If I open a name which has a rank that is not available in the rank list, the rank is added to the list of available ... Andreas Müller
07:29 PM feature request #8323: Make nom.status and rank lists a CdmPreference
Also the prefs seem to work only after restarting TaxEditor. Maybe this is the main reason for the above mentioned is... Andreas Müller
07:11 PM feature request #8323 (Feedback): Make nom.status and rank lists a CdmPreference
Override handling does not yet work correctly for both of them. See #8045#note-9 and #8045#note-13 Andreas Müller
06:32 PM feature request #8058: Further issues for (local) preferences
Maybe we should split this ticket. Andreas Müller
05:45 PM feature request #8058 (Feedback): Further issues for (local) preferences
Katja Luther wrote:
> the common name language preference is added.
Can we still move "Available Languages" below...
Andreas Müller
06:31 PM feature request #8293: Distribution preferences for details view should be serverside preferences
Beside these issues the implementation works correctly as it looks like. This gives more consistency to data and UI. Andreas Müller
06:30 PM feature request #8293: Distribution preferences for details view should be serverside preferences
Is there a reason why if used in distribution editor, the Status field and the modifying text field in details view i... Andreas Müller
06:27 PM feature request #8293 (Feedback): Distribution preferences for details view should be serverside preferences
Andreas Müller
06:27 PM feature request #8293: Distribution preferences for details view should be serverside preferences
The preference menu is not correct. You put it to UI-DistributionData-VocsAndStatus
UI is only for UI! (as the nam...
Andreas Müller
06:13 PM feature request #8293: Distribution preferences for details view should be serverside preferences
The fix seems to work. Katja, can you please check, why empty strings are possible here. It is a bit strange. In the ... Andreas Müller
05:27 PM feature request #8293: Distribution preferences for details view should be serverside preferences
Andreas Müller wrote:
> This error is a blocker!!
I tried to fix with 955fadf4. Will see if it works
Andreas Müller
05:12 PM feature request #8293: Distribution preferences for details view should be serverside preferences
This error is a blocker!! Andreas Müller
05:11 PM feature request #8293: Distribution preferences for details view should be serverside preferences
When trying to edit a distribution in facts view I get an IAE:
~~~
login : admin
editor version : 5.8.0.20190718...
Andreas Müller
06:04 PM feature request #8383 (Closed): Add CORS header
Andreas Kohlbecker
05:53 PM feature request #8383 (Resolved): Add CORS header
Applied in changeset commit:utis-webapp|c16dc4758af86cb502dfc7f6687fdc4c8c5c5c4a. Andreas Kohlbecker
11:12 AM feature request #8383 (Closed): Add CORS header
Andreas Kohlbecker
06:01 PM Revision 72dc91d6 (cdm-dataportal): ref #8388 block to search UTIS implemented - removing debug code
Andreas Kohlbecker
05:53 PM Revision c16dc475 (utis-webapp): fix #8383 adding CORSE headers
Andreas Kohlbecker
05:52 PM Revision 0aebb4bc (taxeditor): ref #8293 try to fix IAE in Distribution Details View if status pref exists
Andreas Müller
05:52 PM Revision 86c96664 (utis-core): better metadata on phycobank
Andreas Kohlbecker
05:51 PM Revision 793ded33 (taxeditor): ref #8385 Fix potential NPE
Patrick Plitzner
05:45 PM feature request #8388 (Resolved): UTIS search block
Applied in changeset commit:cdm-dataportal|c05d1cfbddb1d4e5942efc85201405814a0f9a22. Andreas Kohlbecker
05:44 PM feature request #8388 (Closed): UTIS search block
implement a Drupal block which allows using the UTIS service Andreas Kohlbecker
05:45 PM Revision c05d1cfb (cdm-dataportal): fix #8388 block to search UTIS implemented
Andreas Kohlbecker
05:41 PM Revision 2393d9c5 (cdm-dataportal): upgrading to fontawesome 5.9.0
Andreas Kohlbecker
05:37 PM Revision cf115b19 (taxeditor): ref #8385 Remove publish flag preference when set to default
Patrick Plitzner
05:37 PM Revision 34ec6317 (taxeditor): ref #8192 Expand media section by default
Patrick Plitzner
05:25 PM Revision 955fadf4 (taxeditor): ref #8293 try to fix IAE in Distribution Details View if status pref exists
Andreas Müller
04:20 PM bug #8375: ReferenceEllypsisFormatter produces too long strings in specific cases
Problem: long book titles, especially if the reference is part of book.
Example longest in book - reference
![]...
Wolf-Henning Kusber
04:19 PM feature request #7932: Implement subject resolver for CdmPreferences
Andreas K., do you already use the subject resolver in the preference cache you use for vaadin? Andreas Müller
04:18 PM bug #7849: Improve DB Preferences handling and saving in TaxEditor
To me this ticket seems to be fixed and open issues are moved to new tickets. In general the structure for handling d... Andreas Müller
03:54 PM bug #7849: Improve DB Preferences handling and saving in TaxEditor
Andreas Müller wrote:
> On local prefs Name Details View page the "Restore Defaults" button seems to be enabled even...
Andreas Müller
03:52 PM bug #7849: Improve DB Preferences handling and saving in TaxEditor
Andreas Müller wrote:
> With empty preferences when only the DistrEditor page is opened without any change afterward...
Andreas Müller
03:05 PM bug #8386 (Closed): Disable admin menu when not logged into a DB
currently it is shown after (re)start which does not make sense as admin functionality is always related to DB login. Andreas Müller
01:14 PM feature request #8384 (New): Consider to use icon links for all reference citations
Candidates:
* Bibliography
Andreas Kohlbecker
01:13 PM feature request #8320 (Closed): Links to reference page as appendend icon instead of having the whole citation as link
Andreas Müller wrote:
> Do we have any rules where these icons are used? E.g. in the bibliography they do not seem t...
Andreas Kohlbecker
12:39 PM feature request #8320: Links to reference page as appendend icon instead of having the whole citation as link
Do we have any rules where these icons are used? E.g. in the bibliography they do not seem to be used yet though it m... Andreas Müller
12:37 PM feature request #8320: Links to reference page as appendend icon instead of having the whole citation as link
Andreas Kohlbecker wrote:
> And this one
>
> http://test.e-taxonomy.eu/dataportal/preview/cichorieae/cdm_datapor...
Andreas Müller
08:13 AM feature request #8320: Links to reference page as appendend icon instead of having the whole citation as link
And this one
http://test.e-taxonomy.eu/dataportal/preview/cichorieae/cdm_dataportal/taxon/a67fc2ab-1452-4c32-84b6...
Andreas Kohlbecker
08:05 AM feature request #8320: Links to reference page as appendend icon instead of having the whole citation as link
http://int.e-taxonomy.eu/dataportal/integration/reference/cdm_dataportal/taxon/c246856f-c03e-4cb7-ac92-d9b2864084cd
...
Andreas Kohlbecker
12:51 PM feature request #8294 (Closed): Make display of ID in source and ID Namespace configurable
translated preferences. Closing the ticket. Patrick Plitzner
12:12 PM feature request #8294 (Feedback): Make display of ID in source and ID Namespace configurable
All the rest seems to work and looks ok. Andreas Müller
12:08 PM feature request #8294: Make display of ID in source and ID Namespace configurable
same in local preference (if this is different code) Andreas Müller
12:06 PM feature request #8294: Make display of ID in source and ID Namespace configurable
Server side preferences are not yet translated (Submenu Sources and Labels on page) (update code before changing as ... Andreas Müller
12:49 PM Revision ddaac84e (taxeditor): ref #8294 i18n for plugin.xml
Patrick Plitzner
12:38 PM Revision 7ec03c92 (taxeditor): ref #8294 i18n
Patrick Plitzner
12:05 PM Revision 22f28ff0 (taxeditor): change label for ID Namespace
Andreas Müller
11:31 AM bug #8260 (Closed): Details and Supplemental Data View do not save the expansion state of sections
Patrick Plitzner
10:41 AM bug #8260: Details and Supplemental Data View do not save the expansion state of sections
Fix 20b35d99 seems to solve the problem. I think we can close the ticket. Andreas Müller
10:55 AM bug #8129: Load images asynchronously in media details view
Andreas Müller wrote:
>...
> * the size of the image is recomputed, most often the size can be computed from metada...
Andreas Müller
10:52 AM bug #8129: Load images asynchronously in media details view
Andreas Müller wrote:
> Also when switing between 2 entries in bulk editor with <2sec between switches often the ent...
Andreas Müller
10:46 AM bug #8129: Load images asynchronously in media details view
The expand problem seems to be solved (see #8260). Final question: what is the default. I suggest to have "expanded" ... Andreas Müller
12:51 AM bug #8129: Load images asynchronously in media details view
Please test intensively e.g. with the 2 given media if the behavior is as you would expect for rapid data entry and c... Andreas Müller
12:50 AM bug #8129: Load images asynchronously in media details view
The loading does not stop immediately when a new URL is entered but should. Otherwise an image is shown which does no... Andreas Müller
12:48 AM bug #8129: Load images asynchronously in media details view
Andreas Müller wrote:
> Also when switing between 2 entries in bulk editor with <2sec between switches often the ent...
Andreas Müller
12:44 AM bug #8129: Load images asynchronously in media details view
Also when switing between 2 entries in bulk editor with <2sec between switches often the entries are not selected any... Andreas Müller
12:42 AM bug #8129: Load images asynchronously in media details view
Hmm, sometimes it works but most often it does not. Looks like you have at least to open a new bulk editor to make it... Andreas Müller
12:07 AM bug #8129: Load images asynchronously in media details view
Patrick Plitzner wrote:
> Andreas Müller wrote:
> > Now, the media details view is always collpased and the state i...
Andreas Müller
10:42 AM bug #8374: Save genus generated for a species with a different reference
Problem with bibliographic reference Part of Book.
![](picture938-1.png)
![](picture938-2.png)
hint: Book titel co...
Wolf-Henning Kusber
10:34 AM bug #6523: Correct display of misspellings in synonymy
Als unbeteiligter Leser halte ich die Ausgabe für sachlich falsch oder zumindes für unverständlich. Erst mit externer... Wolf-Henning Kusber
10:04 AM Revision 3b069ad4 (taxeditor): ref #8129 Handel widget disposed exceptions
Patrick Plitzner
10:00 AM Revision 20b35d99 (taxeditor): ref #8260 Fix string comparison
Patrick Plitzner
08:16 AM bug #8287 (Closed): RegistrationServiceImpl.page( .... Collection<UUID> typeDesignationStatusUuids ... ) fails when NULL and UUIDs are passed
Andreas Kohlbecker
08:13 AM feature request #8304: Name page redirects to according taxon depending on query parameter
This is a misunderstanding. During the standup yesterday I was talking about a global switch which overrides the defa... Andreas Kohlbecker

07/17/2019

08:54 PM feature request #7408 (In Progress): [E+M] Support for preferred common names in data portal
we may discuss, if we simply use different features for th different common names. Therefore I take this ticket and a... Andreas Müller
07:28 PM bug #8287: RegistrationServiceImpl.page( .... Collection<UUID> typeDesignationStatusUuids ... ) fails when NULL and UUIDs are passed
combination of types and none are searchable without errors in Vaadin and the portal. If this is the feedback for thi... Wolf-Henning Kusber
07:12 PM bug #8231 (Worksforme): Name relation non
Andreas Kohlbecker
07:07 PM task #5857 (Closed): show nomenclatural status for for representations of TaxonName
Andreas Kohlbecker
06:56 PM bug #8365 (Closed): DerivedUnitFacadeCacheStrategy should remove collection codes from accession numbers
ok, so i am closing this issue now Andreas Kohlbecker
05:22 PM bug #8365: DerivedUnitFacadeCacheStrategy should remove collection codes from accession numbers
In the Youngia example the version with brackets is clearer.
Wolf-Henning Kusber
09:02 AM bug #8365 (Feedback): DerivedUnitFacadeCacheStrategy should remove collection codes from accession numbers
Andreas Kohlbecker
09:02 AM bug #8365: DerivedUnitFacadeCacheStrategy should remove collection codes from accession numbers
removing the parentheses would affect all portals. Before doing this we should keep the effect on other portals in mi... Andreas Kohlbecker
06:45 PM feature request #8294 (Resolved): Make display of ID in source and ID Namespace configurable
All issues should be fixed now.
What still would be nice is if the disabled local preferences would reflect the st...
Patrick Plitzner
06:45 PM bug #8382 (Closed): Local Supplemental Data Source Preferences should reflect the state of admin preferences
Copied from #8294:
"What still would be nice is if the disabled local preferences would reflect the state of the a...
Patrick Plitzner
06:30 PM Revision 660c3f90 (taxeditor): ref #8294 Swap showIdInSource and ShowIdNamespace
Patrick Plitzner
06:07 PM task #8209: use ellypsed references for all reference comboboxes
last screen shot was misuse of an in-reference Wolf-Henning Kusber
06:06 PM task #8209: use ellypsed references for all reference comboboxes
Minor problem,
Name editor if a new bibliographic reference is entered with a very long title.
![](picture115-1.png)
Wolf-Henning Kusber
05:40 PM task #8209: use ellypsed references for all reference comboboxes
Name Editor with "Nomenclatural reference" is working. No problem because the maximum breadth of the drop down is siz... Wolf-Henning Kusber
07:58 AM task #8209: use ellypsed references for all reference comboboxes
I copied the latest problem to a new ticket: #8375
Did you check all editors with reference comboboxes? Is ellypsi...
Andreas Kohlbecker
05:59 PM bug #8381 (Closed): Closing the details view throws widget is disposed exception
steps to reproduce:
1. Open editor
1. Connect
1. Open a taxon
1. Close details view
Note: The exception is n...
Patrick Plitzner
05:45 PM feature request #8245 (Closed): Improve representation of DescriptionElementBase.timeperiod
The formatting of year only or year and month only looks ok now so we can close the ticket. Other open issues will be... Andreas Müller
05:45 PM bug #8375: ReferenceEllypsisFormatter produces too long strings in specific cases
Die bibliographische Referenz (Journal) wird hier nicht abgekürzt. Je kürzer der Journal title desto eher Verwechselu... Wolf-Henning Kusber
08:04 AM bug #8375: ReferenceEllypsisFormatter produces too long strings in specific cases
This could an effect of the changes which have been applied for #8375
Andreas Kohlbecker
07:55 AM bug #8375 (New): ReferenceEllypsisFormatter produces too long strings in specific cases
Again there are extremely long entries. The breadth of the dropdown box differs extremly. (was originally reported in... Andreas Kohlbecker
05:27 PM feature request #8304 (Feedback): Name page redirects to according taxon depending on query parameter
I do not fully understand this solution. I thought it should be configurable for each location that has a link to a n... Andreas Müller
05:14 PM feature request #8320 (Feedback): Links to reference page as appendend icon instead of having the whole citation as link
Is there an example somewhere on test server or integration? Andreas Müller
05:06 PM bug #8260: Details and Supplemental Data View do not save the expansion state of sections
Andreas Müller wrote:
> Patrick Plitzner wrote:
> > Andreas Müller wrote:
> > > Now, nomenclatural reference is ne...
Patrick Plitzner
04:33 PM bug #8260: Details and Supplemental Data View do not save the expansion state of sections
Patrick Plitzner wrote:
> Andreas Müller wrote:
> > Now, nomenclatural reference is never expanded. Maybe it was li...
Andreas Müller
11:03 AM bug #8260: Details and Supplemental Data View do not save the expansion state of sections
Andreas Müller wrote:
> Now, nomenclatural reference is never expanded. Maybe it was like this before already and I ...
Patrick Plitzner
04:58 PM bug #8129: Load images asynchronously in media details view
Andreas Müller wrote:
> Now, the media details view is always collpased and the state is not saved - at least if I c...
Patrick Plitzner
04:43 PM bug #8129 (Feedback): Load images asynchronously in media details view
Now, the media details view is always collpased and the state is not saved - at least if I choose the above mentioned... Andreas Müller
10:36 AM bug #8129 (Resolved): Load images asynchronously in media details view
Implemented asynchronous loading in advanced media view.
Opened another ticket for placeholder image -> #8378
Patrick Plitzner
04:56 PM feature request #8283 (Closed): Allow adding media to terms in taxeditor
Created new ticket for remaining issues -> #8380 Patrick Plitzner
04:31 PM feature request #8283: Allow adding media to terms in taxeditor
Patrick Plitzner wrote:
> Just when I wrote the last comment it happened. But still, it is very unlikely that this w...
Andreas Müller
10:56 AM feature request #8283: Allow adding media to terms in taxeditor
Just when I wrote the last comment it happened. But still, it is very unlikely that this will happen to a user. We ma... Patrick Plitzner
10:51 AM feature request #8283: Allow adding media to terms in taxeditor
Andreas Müller wrote:
> Patrick Plitzner wrote:
> > Andreas Müller wrote:
> > > The data may got lost the followin...
Patrick Plitzner
04:56 PM bug #8380 (New): Unsaved media gets lost in details view
Copied from #8283:
On rem_conf_am open features.
* Got to Vocabulary "Untitled" and open term "test2".
* Open ...
Patrick Plitzner
02:27 PM Revision b91b98c5 (taxeditor): ref #8294 Move supplemental data source preferences to sub menu
Patrick Plitzner
01:52 PM Revision 456115c5 (taxeditor): ref #8294 Add missing "Show UUID/ID" option to preference
Patrick Plitzner
01:19 PM Revision 31457bf1 (taxeditor): ref #8294 code cleaning
Patrick Plitzner
12:04 PM Revision 8d5d43cb (utis-client): updating documentation on templates
Andreas Kohlbecker
11:54 AM Revision 1ff06b58 (taxeditor): Fix possible NPE
Patrick Plitzner
11:49 AM bug #8368 (Closed): problems in compose_cdm_specimen_or_observation_tree_entry()
error message suppressed and visible effect of the problem solved, the further discussion and post release review tas... Andreas Kohlbecker
11:47 AM bug #8370 (Closed): feature blocks created by compose_description_element_individuals_association() are broken
problem solved discussion and post release review task copied to #8379 Andreas Kohlbecker
11:47 AM feature request #8135 (New): Implement verbatim type information in TaxEditor
temporary disabled textual type designation and moved to 5.9 milestone where the necessary model changes will be impl... Patrick Plitzner
11:46 AM Revision d7f33c8d (taxeditor): ref #8135 temporary disabled textual type designation
Patrick Plitzner
11:46 AM task #8379 (Closed): Review strange specimen implementations
Please
* #8368
* #8370
I am repeating according comments from the original tickets here:
----
# #8370
...
Andreas Kohlbecker
10:59 AM Revision a63beab2 (taxeditor): ref #8129 Handle all exceptions
Patrick Plitzner
10:44 AM Revision 79959591 (cdmlib): ref #8281 and E+M import (additional attributes in TeamOrPersonBase, Reference and TaxonNode)
Andreas Müller
10:44 AM Revision 07ab7ef0 (cdmlib): ref #5448 adapt parser to recognize old ranks like proles
Andreas Müller
10:35 AM Revision 663f4308 (taxeditor): ref #8129 Fix potential NPE
Patrick Plitzner
10:19 AM feature request #8378 (New): Show placeholder for asynchronously loaded images in details view
Patrick Plitzner
10:03 AM Revision 45272f9d (taxeditor): ref #8129 minor refactoring
Patrick Plitzner
10:01 AM Revision 1ce04105 (taxeditor): ref #8129 Load images asynchronously in advanced media view
Patrick Plitzner
08:44 AM bug #8377 (Closed): TypeDesignationsEditors: Delete must not be allowe before the workingset is saved
this affects both:
* NameTypeDesignationEditor
* SpecimenTypeDesignationWorkingsetEditor
Im RegistrationWorkli...
Andreas Kohlbecker
08:39 AM bug #8376 (Closed): RegistrationWorkingsetEditor: prevent clicking any futher buttons after the openting of a popup editor has been triggered
Andreas Kohlbecker
08:10 AM bug #7845 (Closed): NamePopupEditor new Genus button should clear the genus name field in the new editor
Andreas Kohlbecker
08:08 AM feature request #8284 (Closed): starting a registration for an existing name causes the name editor to pop up in read only mode
Andreas Kohlbecker
07:49 AM feature request #7966 (Closed): Registration search simplify type select options
Andreas Kohlbecker
07:48 AM feature request #8306 (Closed): Registration page links to registered taxon name
Andreas Kohlbecker

07/16/2019

07:58 PM feature request #8339: Completely remove the potentially redundant 'acceptedFor' parameter from synonym page
OK, now I at least understand what it is used for. However, I doubt (but am not sure) that this is still needed. Mayb... Andreas Müller
06:57 PM feature request #8306: Registration page links to registered taxon name
fine, ticket can be closed. Wolf-Henning Kusber
06:54 PM feature request #7966: Registration search simplify type select options
Lectotype gives back: Specimen types AND Name types of genera, species and below = correct
Problem fully resolved....
Wolf-Henning Kusber
06:45 PM feature request #7966: Registration search simplify type select options
Original designation gives back: Name types of genera = correct
Holotype gives back: Specimen types of species and b...
Wolf-Henning Kusber
06:29 PM task #8209: use ellypsed references for all reference comboboxes
Again there are extremely long entries. The breadth of the dropdown box differs extremly.
![](picture177-1.png)
Wolf-Henning Kusber
06:18 PM bug #8365: DerivedUnitFacadeCacheStrategy should remove collection codes from accession numbers
Quote
"OK, parentheses are removed again."
The brackets are reinstated not removed but should be removed, see S...
Wolf-Henning Kusber
12:08 PM bug #8365 (Resolved): DerivedUnitFacadeCacheStrategy should remove collection codes from accession numbers
OK, parentheses are removed again. Andreas Kohlbecker
06:11 PM feature request #8284: starting a registration for an existing name causes the name editor to pop up in read only mode
Info for Genera without reference:
The chosen name needs to be completed before it can be used. Please add the nome...
Wolf-Henning Kusber
06:09 PM bug #7187 (Closed): ReferenceEditor: saving with DOI casues exception
Andreas Kohlbecker
05:46 PM bug #7187: ReferenceEditor: saving with DOI casues exception
Review fehlte. Feature seit Monaten ohne Beanstandung im Routinebetrieb der Release Version. Ticket kann geschlossen ... Wolf-Henning Kusber
06:00 PM bug #7845: NamePopupEditor new Genus button should clear the genus name field in the new editor
new error: #8374 Wolf-Henning Kusber
05:56 PM bug #7845: NamePopupEditor new Genus button should clear the genus name field in the new editor
Ticket can be closed, but "Save" error when an uninominal should be saved. Wolf-Henning Kusber
06:00 PM bug #8374 (Duplicate): Save genus generated for a species with a different reference
Test system:
New species entered. Genus not in list.
Input "new" genus with reference entered. Saving result in a...
Wolf-Henning Kusber
05:56 PM bug #7885 (Worksforme): registration search by name finds also typifications for this name
this is now obviously working:
http://test.e-taxonomy.eu/dataportal/preview/phycobank/cdm_dataportal/registration-...
Andreas Kohlbecker
05:51 PM feature request #8294 (Feedback): Make display of ID in source and ID Namespace configurable
Patrick, can you try to fix the open issues? Andreas Müller
05:47 PM feature request #8294: Make display of ID in source and ID Namespace configurable
yes, it is switched and also in both views it is called "ID in Namespace" but should be "ID Namespace". Also ID Names... Andreas Müller
05:38 PM feature request #6709 (Closed): Do not show UUID on media page

And now to your last question:
> By the way, why have we removed the possibility to show multiple representation...
Andreas Kohlbecker
05:35 PM feature request #6709: Do not show UUID on media page
Andreas Müller wrote:
> By the way, is there a reason why we show the file name below image? Sometimes it is very ug...
Andreas Kohlbecker
05:30 PM feature request #6709: Do not show UUID on media page
Andreas Müller wrote:
> Andreas Kohlbecker wrote:
> > e.g.: http://int.e-taxonomy.eu/dataportal/integration/referen...
Andreas Kohlbecker
02:41 PM feature request #6709 (Feedback): Do not show UUID on media page
Feel free to create new tickets from the above questions. Andreas Müller
02:41 PM feature request #6709: Do not show UUID on media page
Connected with the representation is the question which filename to use different representations have different file... Andreas Müller
02:39 PM feature request #6709: Do not show UUID on media page
By the way, why have we removed the possibility to show multiple representations on the media page? It would be nice ... Andreas Müller
02:35 PM feature request #6709: Do not show UUID on media page
By the way, is there a reason why we show the file name below image? Sometimes it is very ugly like in the above ment... Andreas Müller
02:14 PM feature request #6709: Do not show UUID on media page
Andreas Kohlbecker wrote:
> e.g.: http://int.e-taxonomy.eu/dataportal/integration/reference/cdm_dataportal/media/d0b...
Andreas Müller
05:34 PM feature request #8373 (New): media page: avoid showing ugly file names as title replacement

By the way, is there a reason why we show the file name below image? Sometimes it is very ugly like in the above me...
Andreas Kohlbecker
05:29 PM feature request #8372 (New): media page: show media type in the page title
distinguish the different media types an to adapt the title accordingly: Instead of "Media ...", "Image ...", "Video ... Andreas Kohlbecker
05:23 PM bug #8340 (Feedback): is accepted for Footnotes missing and with wrong index
Andreas Kohlbecker
05:23 PM bug #8340: is accepted for Footnotes missing and with wrong index
Andreas Müller wrote:
> I do not really understand the problem. On http://test.e-taxonomy.eu/dataportal/preview/cich...
Andreas Kohlbecker
02:07 PM bug #8340: is accepted for Footnotes missing and with wrong index
I do not really understand the problem. On http://test.e-taxonomy.eu/dataportal/preview/cichorieae/cdm_dataportal/tax... Andreas Müller
05:22 PM bug #8260 (Feedback): Details and Supplemental Data View do not save the expansion state of sections
Now, nomenclatural reference is never expanded. Maybe it was like this before already and I simply did not recognize. Andreas Müller
05:15 PM feature request #8283 (Feedback): Allow adding media to terms in taxeditor
Patrick Plitzner wrote:
> Andreas Müller wrote:
> > The data may got lost the following way.
> >
> > * Open term...
Andreas Müller
05:13 PM feature request #6316 (Closed): display source references of media objects in media page
using ; as separator for multiple sources: commit:cdm-dataportal|c021779a Andreas Kohlbecker
02:55 PM feature request #6316 (Feedback): display source references of media objects in media page
Generally this works. Only we should replace "," by ";" as separator for multiple sources. The former is often part o... Andreas Müller
05:07 PM Revision c021779a (cdm-dataportal): ref #6316 using ; as separator for multiple sources
Andreas Kohlbecker
05:03 PM feature request #8245: Improve representation of DescriptionElementBase.timeperiod
here it is: http://int.e-taxonomy.eu/dataportal/integration/reference/cdm_dataportal/taxon/c246856f-c03e-4cb7-ac92-d9... Andreas Kohlbecker
02:59 PM feature request #8245: Improve representation of DescriptionElementBase.timeperiod
Andreas Kohlbecker wrote:
> done, for testing you can use for example http://edit.test/d7/reference_int/cdm_dataport...
Andreas Müller
05:02 PM bug #8371 (New): When creating a new term for a vocabulary the term should have the focus afterwards
... maybe even better, the focus should go to the details view label field to allow immediately enter the label for t... Andreas Müller
05:02 PM bug #8343: potential timezone problem in application stack
Andreas Müller wrote:
> I don't understand why this is rejected. The problem still exists as you can see in the abov...
Andreas Kohlbecker
04:47 PM bug #8343: potential timezone problem in application stack
Andreas Müller wrote:
> Andreas Kohlbecker wrote:
> > Maybe this is an issue which comes from the time when the tim...
Andreas Kohlbecker
03:18 PM bug #8343: potential timezone problem in application stack
Andreas Kohlbecker wrote:
> Maybe this is an issue which comes from the time when the timezone data was not correctl...
Andreas Müller
03:16 PM bug #8343 (Feedback): potential timezone problem in application stack
I don't understand why this is rejected. The problem still exists as you can see in the above link. It might not be a... Andreas Müller
04:47 PM bug #8129: Load images asynchronously in media details view
Also we may want to have a replacement image which shows "loading" or something similar while the image is loading. A... Andreas Müller
04:44 PM bug #8129 (Feedback): Load images asynchronously in media details view
It seems to work only in the simple view but not in the advanced view.
As an example use rem_conf_am, bulk editor ...
Andreas Müller
04:44 PM bug #8370: feature blocks created by compose_description_element_individuals_association() are broken
Andreas Müller wrote:
> I think you accidentaly changed back to status "new"
thanx for fixing this Andreas.
@K...
Andreas Kohlbecker
04:08 PM bug #8370 (Resolved): feature blocks created by compose_description_element_individuals_association() are broken
I think you accidentaly changed back to status "new" Andreas Müller
04:04 PM bug #8370 (New): feature blocks created by compose_description_element_individuals_association() are broken
this bug has been introduced with commit:cdm-dataportal|e89c1115 Andreas Kohlbecker
04:03 PM bug #8370 (Resolved): feature blocks created by compose_description_element_individuals_association() are broken
Applied in changeset commit:cdm-dataportal|43d01429e6dbd2d56970902ad525376f00b699b1. Andreas Kohlbecker
04:00 PM bug #8370 (Closed): feature blocks created by compose_description_element_individuals_association() are broken
For example Achnanthidium exiguum (Grunow) Czarn. in Algaterra shows multiple errors in the error box:
~~~
Warnin...
Andreas Kohlbecker
04:09 PM Revision 0a59879e (cdm-dataportal): renaming confusing render array key from 'markup' to 'specimen_table'
Andreas Kohlbecker
04:03 PM Revision 43d01429 (cdm-dataportal): fix #8370 fixing bug introduced in e89c1115
Andreas Kohlbecker
03:20 PM feature request #8320 (Resolved): Links to reference page as appendend icon instead of having the whole citation as link
Andreas Müller
03:17 PM bug #8369 (Closed): SpecimenTypeDesignationDTO can not be serialized to JSON
Andreas Kohlbecker
02:19 PM bug #8369 (Closed): SpecimenTypeDesignationDTO can not be serialized to JSON
SpecimenTypeDesignationDTO is missing getters and setters and thus can not be serialized Andreas Kohlbecker
03:16 PM Revision c45d681a (cdmlib): ref #8369 SpecimenTypeDesignationDTO: adding missing getters and basing on TypedEntityReference
Andreas Kohlbecker
03:15 PM bug #8368 (Feedback): problems in compose_cdm_specimen_or_observation_tree_entry()
Katja, please help disentangling the situation. Andreas Kohlbecker
03:13 PM bug #8368: problems in compose_cdm_specimen_or_observation_tree_entry()
After fixing the problems in this code i noticed that this code is not generating any output at all.
I attempted t...
Andreas Kohlbecker
02:19 PM bug #8368: problems in compose_cdm_specimen_or_observation_tree_entry()
working on this issue I found another issue: #8369 Andreas Kohlbecker
02:18 PM bug #8368 (In Progress): problems in compose_cdm_specimen_or_observation_tree_entry()
Andreas Kohlbecker
12:10 PM bug #8368 (Closed): problems in compose_cdm_specimen_or_observation_tree_entry()
Hallo Katja,

ich leite das mal an dich weiter, denn es gibt hier ein Problem mit deinem Kode in compose_cdm_speci...
Andreas Kohlbecker
03:14 PM Revision 6abd581c (cdm-dataportal): typo
Andreas Kohlbecker
03:14 PM Revision 0557d51a (cdm-dataportal): ref #8368 fixing check for exitance of property
Andreas Kohlbecker
03:14 PM task #8118: Update MySQL drivers
Andreas Kohlbecker wrote:
> **The proper solution it the timezone problem is documented at MySqlFaq#The-server-time-...
Andreas Müller
01:44 PM Revision aa6598d8 (cdm-dataportal): avoiding php warnings due to missing
Andreas Kohlbecker
01:36 PM Revision 13581ffc (cdmlib): ref #8365 removing parentheses from code + accession number - again, adapting test
Andreas Kohlbecker
01:32 PM Revision f2b0e412 (cdmlib): ignoring just the test() method in TaxonRelationshipsDTOTest
Andreas Kohlbecker
12:48 PM feature request #7791 (Closed): Visualize the phycobank higher taxon graph
No improvements are needed by now Andreas Kohlbecker
12:47 PM bug #8321 (Closed): Namepage shows wrong taxa as related to the name
Wolf-Henning Kusber wrote:
> Both Eunotia krammeri with different Author teams are not mixed anymore. The described ...
Andreas Kohlbecker
12:41 PM bug #8278 (Closed): LazyInitializationException (LIE) in ReferenceEllypsisCaptionGenerator
closing, since this problem no longer occurred. Andreas Kohlbecker
12:13 PM feature request #8366 (Closed): Same typedesignation display for registration page as in name page
Andreas Kohlbecker
12:09 PM feature request #8357 (Closed): implement client adapter for diatom base
Andreas Kohlbecker
12:07 PM Revision 12516e6b (cdmlib): ref #8365 removing parentheses from code + accession number - again
Andreas Kohlbecker
11:30 AM Revision 8f919bc0 (utis-core): attempt to create a 1.0 version of utis which is not causing a masssive startup delay - not usable yet
Andreas Kohlbecker
11:28 AM Revision c121ad4a (utis-webapp): using utis-core 1.2.1-SNAPHOT, but this combination is causing problems on the server
Andreas Kohlbecker

07/15/2019

04:30 PM bug #8233: [Follow up] Creating type duplicates
Move to next milestone for 5.8 release Patrick Plitzner
04:29 PM Revision 6f1e2526 (taxeditor): ref #8129 Fix refresh bug when adding a new empty media to a term
Patrick Plitzner
04:14 PM bug #8225: Deleting one of two type designations removes both
Move to next milestone to implement a better solution than the temporary fix. Patrick Plitzner
04:02 PM feature request #6849: [DISCUSS] How to handle "kind of" term creation in TermEditor
Moving to next milestone for further discussion Patrick Plitzner
03:58 PM feature request #8135 (Feedback): Implement verbatim type information in TaxEditor
@Andreas: There was something Walter wanted but I can't remember what it was. Depending on that we may close this tic... Patrick Plitzner
03:45 PM Revision f19b887f (utis-core): limiting GBIFBackboneClient to 1000 subchecklists
Andreas Kohlbecker
03:27 PM task #8130: Check if related feature data is cleared when supported facts type is changed
Move to next milestone for remaining discussion Patrick Plitzner
03:26 PM feature request #8044: Add "Move to..." menu to term editor
Move to next milestone because this is still considered experimental Patrick Plitzner
03:25 PM feature request #8248: Implement OWL import
Move to next milestone because this is still considered experimental Patrick Plitzner
03:24 PM feature request #6774: Implement OWL export
Move to next milestone because this is still considered experimental Patrick Plitzner
03:23 PM feature request #8335 (Resolved): Store character matrix table state as DB preference
Patrick Plitzner
03:22 PM feature request #8335: Store character matrix table state as DB preference
Move to next milestone because the character matrix is still considered experimental Patrick Plitzner
03:20 PM feature request #8242: Implement filtered combo boxes for state selection in CharacterMatrix
Move to next milestone because this is still considered experimental Patrick Plitzner
03:19 PM feature request #8294: Make display of ID in source and ID Namespace configurable
Tested on nightly: The admin and local preferences work as expected BUT they seem to be swapped. Also the one prefere... Patrick Plitzner
02:36 PM feature request #8283: Allow adding media to terms in taxeditor
Added #8367 for remaining issues and discussion
All the rest should be implemented and functional now
Patrick Plitzner
02:34 PM bug #8367 (New): Advanced media view is not available for media not edited in media details view
Copied from #8283:
"With the current implementation it is not possible to switch between advanced and simple view bu...
Patrick Plitzner
02:29 PM feature request #8286 (Closed): Add cm as unit term to CDM
Testes and already used in additivity_ontology on test server. Patrick Plitzner
02:22 PM feature request #8351 (Closed): name page: show type designations with map
Andreas Kohlbecker
02:12 PM Revision 556458d0 (utis-core): removing obsolte % from like match mode query
Andreas Kohlbecker
01:57 PM Revision 1461f4eb (utis-webapp): ref #8357 adding DiatomBaseClient to the index.html
Andreas Kohlbecker
01:55 PM task #8363 (In Progress): PESI SOAP service seems to return duplicate records
I send an email to Bart .... Andreas Kohlbecker
01:17 PM task #8363: PESI SOAP service seems to return duplicate records
As the uuid seems to be the same I don't think we have data duplicates Andreas Müller
01:16 PM task #8363: PESI SOAP service seems to return duplicate records
If you are sure that this is not a data or data submission issue, I will delegate this problem to Bart Vanhoorn. Andreas Kohlbecker
01:10 PM task #8363: PESI SOAP service seems to return duplicate records
Why did you assign this to me. As it does not seem to be data issue but a service issue I can't see what I can do. Andreas Müller
12:58 PM task #8363: PESI SOAP service seems to return duplicate records
The search for "Crepis foetida%" (`http --timeout 600 https://cybertaxonomy.eu/eu-bon/utis/1.3/search 'providers==pes... Andreas Kohlbecker
12:12 PM task #8363: PESI SOAP service seems to return duplicate records
can you say which data is duplicated?
Does it appear as duplicate in the eu-nomen portal as well?
Andreas Müller
01:25 PM Revision d1895dbe (utis-webapp): ref #8357 activating DiatomBaseClient in UTIS controller
Andreas Kohlbecker
01:24 PM Revision bed1d4af (utis-core): ref #8357 implementing DiatomBaseClient on base of the WoRMS client
Andreas Kohlbecker
12:38 PM Revision a2dbd247 (utis-core): bumping version to 1.2.3
Andreas Kohlbecker
11:25 AM feature request #6238: add name of sec reference to display of concept relations in portal and a little header
Hi Gabi,
ich habe gerade dieses Ticket hier gefunden - ist erledigt.
Kannst du mal gucken ob das jetzt soweit O...
Andreas Kohlbecker

07/13/2019

06:11 PM feature request #8366: Same typedesignation display for registration page as in name page
Image position and type positions are fine. The source interrupt the reading but is an important reference.
![](pict...
Wolf-Henning Kusber
05:55 PM feature request #8366: Same typedesignation display for registration page as in name page
Name and Registration pages are fine.
For types, map and specimens apear first, than the related name. I like this!
...
Wolf-Henning Kusber

07/12/2019

09:02 PM Revision 8e8784d0 (cdm-dataportal): ref #8366 adapting tests to full typedesignation display with map in registration page
Andreas Kohlbecker
08:34 PM Revision 6e686cc7 (cdmlib): Revert "ignoring TaxonRelationshipsDTOTest"
This reverts commit 18b443282498e7bdbccadf14a861f6b474825297. Andreas Kohlbecker
08:25 PM feature request #8366: Same typedesignation display for registration page as in name page
Wolf-Henning Kusber wrote:
> No review, may be I was to fast:
> http://test.e-taxonomy.eu/dataportal/preview/phyco...
Andreas Kohlbecker
07:29 PM feature request #8366: Same typedesignation display for registration page as in name page
Name page okay: http://test.e-taxonomy.eu/dataportal/preview/phycobank/cdm_dataportal/name/8ad8bc6d-b413-4af1-8876-fb... Wolf-Henning Kusber
07:28 PM feature request #8366: Same typedesignation display for registration page as in name page
No review, may be I was to fast:
http://test.e-taxonomy.eu/dataportal/preview/phycobank/cdm_dataportal/registration...
Wolf-Henning Kusber
05:11 PM feature request #8366: Same typedesignation display for registration page as in name page
please review Andreas Kohlbecker
05:10 PM feature request #8366 (Resolved): Same typedesignation display for registration page as in name page
Applied in changeset commit:cdm-dataportal|41a348be0fd4782a984dd5f4e65069d7c7cb99f4. Andreas Kohlbecker
03:42 PM feature request #8366 (Closed): Same typedesignation display for registration page as in name page
The registration page should display the typedesignation in the same ways as in the name page.
A map should also be ...
Andreas Kohlbecker
07:15 PM bug #8365: DerivedUnitFacadeCacheStrategy should remove collection codes from accession numbers
Reviewing the screen shot:
First representation: Lectotype (reference) gathering(Code accession number)
Second repr...
Wolf-Henning Kusber
11:59 AM bug #8365 (Feedback): DerivedUnitFacadeCacheStrategy should remove collection codes from accession numbers
I removed the parentheses but these now causes inconsistent display:
![](picture686-1.png)
What do you think He...
Andreas Kohlbecker
06:45 PM Revision 18b44328 (cdmlib): ignoring TaxonRelationshipsDTOTest
Andreas Kohlbecker
06:20 PM Revision deb2fc24 (cdm-dataportal): ref #8108 adding missing footnotes to name page
Andreas Kohlbecker
05:47 PM Revision b8a0efb3 (cdm-dataportal): grouping and doumenting ws calls
Andreas Kohlbecker
05:33 PM Revision 28702a86 (cdmlib): implemting TypeDesignationPortalController
Andreas Kohlbecker
05:32 PM Revision 35a38115 (cdmlib): ref #8365 putting parentheses back
Andreas Kohlbecker
05:26 PM Revision d8b10f90 (cdm-dataportal): ref #8366 fixing bug
Andreas Kohlbecker
05:23 PM Revision b9fcde0c (cdm-dataportal): ref #8366 adapting tests to full typedesignation display with map in registration page
Andreas Kohlbecker
05:10 PM Revision 41a348be (cdm-dataportal): fix #8366 full typedesignation display with map in registration page
Andreas Kohlbecker
04:00 PM Revision a9a04561 (cdm-dataportal): ref #8366 refactoring typedesignation and map functions
Andreas Kohlbecker
02:44 PM Revision 3000a28d (cdmlib): ref #8365 stripping collection code from accession number only if followed by whitespace
Andreas Kohlbecker
12:01 PM feature request #8357 (In Progress): implement client adapter for diatom base
Andreas Kohlbecker
12:01 PM feature request #8357: implement client adapter for diatom base
Bart Vanhoorne wote:
diatombase.org (and all other subregisters in WoRMS/Aphia http://www.marinespecies.org/subre...
Andreas Kohlbecker
07:29 AM Revision 7fa459c8 (cdmlib): ref #8283 Fix possible NPE when no media is attached to term
Patrick Plitzner
07:28 AM Revision 1ab658e8 (taxeditor): ref #8011, #8129 Fix possible NPEs when media URI can not be resolved
Patrick Plitzner

07/11/2019

06:50 PM Revision 78ddfbeb (taxeditor): ref #8011 Show term media
Patrick Plitzner
06:11 PM Revision a9b9edad (cdmlib): ref #8365 removing parentheses from code + accession number
Andreas Kohlbecker
06:04 PM bug #8365 (Resolved): DerivedUnitFacadeCacheStrategy should remove collection codes from accession numbers
We should also consider removing the parentheses from the accession number since this seems to be useless in most sit... Andreas Kohlbecker
06:00 PM bug #8365 (Closed): DerivedUnitFacadeCacheStrategy should remove collection codes from accession numbers
Users frequently enter the collection code with the accession number which can cause to code to appear duplicated in ... Andreas Kohlbecker
06:02 PM Revision f1248e50 (cdmlib): ref #8365 stripping collection code from accession number in DerivedUnitFacadeCacheStrategy
Andreas Kohlbecker
06:02 PM Revision 4aa385eb (cdmlib): avoiding NPE
Andreas Kohlbecker
05:30 PM Revision 4f7a5ec7 (cdm-dataportal): avoiding undefined property notice
Andreas Kohlbecker
04:41 PM bug #6151: implement pager for search service
Email sent to Scott Chamberlain Andreas Kohlbecker
04:28 PM bug #6151 (Resolved): implement pager for search service
Andreas Kohlbecker
04:24 PM bug #8364 (Closed): ext-links module: problems
Hallo,
wo wir gerade vom Portal reden...
Ich habe mal den External links – sidebar getestet (bei den Cactaceae, O...
Andreas Kohlbecker
03:29 PM Revision c7a4af2c (utis-webapp): doc on log file places
Andreas Kohlbecker
03:10 PM Revision 971fab73 (utis-webapp): impoving text on index.html
Andreas Kohlbecker
03:07 PM Revision 039b1a7b (utis-webapp): deleting obsolte GBIFBetaBackboneClient
Andreas Kohlbecker
03:06 PM Revision 286229be (utis-webapp): updating documentation on available checklists:
- adding Phycobank
- adding default GBIF checklists
Andreas Kohlbecker
03:05 PM Revision 1c6357ca (utis-core): deleting obsolte GBIFBetaBackboneClient
Andreas Kohlbecker
02:59 PM Revision c68ea3cc (utis-core): exteding and cleaning the default checklists for the GBIF client
Andreas Kohlbecker
02:52 PM Revision 62a27c8f (utis-core): deleting obsolte GBIFBetaBackboneClient
Andreas Kohlbecker
02:39 PM task #8363: PESI SOAP service seems to return duplicate records
Hi Anderas, I added you to this ticket as watcher since this could be an issue wit the data delivery to VLIZ Andreas Kohlbecker
02:36 PM task #8363 (Worksforme): PESI SOAP service seems to return duplicate records
see
~~~
http --timeout 600 :8081/search 'providers==pesi' 'query==Crepis foetida' searchMode==scientificNameLike...
Andreas Kohlbecker
02:35 PM Revision 2e351aa3 (utis-core): ref #6151 implementing pager in GBIF client and fixing problems with like search
Andreas Kohlbecker
02:33 PM feature request #6213 (Resolved): use separate tempfolder per store updater
Andreas Kohlbecker
02:23 PM bug #8129: Load images asynchronously in media details view
> This also holds for the image gallery view if "show thumbnails" is switched on (but hopefully there only thumbnail ... Patrick Plitzner
02:19 PM bug #8129 (Resolved): Load images asynchronously in media details view
Patrick Plitzner
02:18 PM Revision ccf1adbd (taxeditor): ref #8129 i18n
Patrick Plitzner
02:08 PM Revision 47c992a7 (taxeditor): ref #8129 Fix image disposing
- refactoring Patrick Plitzner
01:06 PM Revision c5ce9799 (utis-webapp): ref #8362 alowing to specify new unknown sub checklists
Andreas Kohlbecker
01:04 PM feature request #8362 (Closed): GBIFBackboneClient offers too vast amount of subchecklists
Andreas Kohlbecker
01:03 PM Revision a70f009c (utis-core): ref #8362 limiting detault set of gbif sub checklists and thus spedding up startup time
- also implementing like search Andreas Kohlbecker
12:48 PM Revision ca1b4808 (taxeditor): ref #8129 Load images asynchronously in media details view
Patrick Plitzner
08:09 AM Revision 8b2071a3 (cdmlib): ref #8283 Add media uuids to term dto
- fix HQL response handling for left outer joins Patrick Plitzner
08:07 AM Revision f3b620c8 (utis-core): store updater thread wirth minimus priority
Andreas Kohlbecker

07/10/2019

11:12 PM feature request #8362 (Closed): GBIFBackboneClient offers too vast amount of subchecklists
The GBIFBackboneClient fetches all 45400 sub checklists. This makes the capabilities response extremely unusable and ... Andreas Kohlbecker
10:10 PM Revision 0470eeac (utis-webapp): better log folder detection
Andreas Kohlbecker
10:09 PM Revision f92a98aa (utis-core): ref #6213 separate tempfolder per store updater - creating missing tmp folder
Andreas Kohlbecker
06:20 PM Revision c70386c0 (utis-core): ref #6213 separate tempfolder per store updater
Andreas Kohlbecker
06:20 PM Revision 84ee3f65 (utis-webapp): better logfile names
Andreas Kohlbecker
06:19 PM Revision a3528828 (utis-webapp): removing logfiles
Andreas Kohlbecker
06:19 PM Revision 2f86c850 (utis-webapp): removing logfiles
Andreas Kohlbecker
05:50 PM Revision 9d3d4e28 (utis-webapp): webapp context specific logfiles and logging of web requests
Andreas Kohlbecker
05:48 PM Revision 2f0b034a (utis-core): modernizing logging -> log4j2
Andreas Kohlbecker
03:08 PM Revision 1d603ffa (utis-webapp): reenabling RollingFile Logger (/var/log/jetty8/utis.log)
Andreas Kohlbecker
03:06 PM Revision 03b34296 (utis-core): ref #6151 paging of scientificNameLike and vernacularNameLike search modes in Phycobank client by basing on new common abstract cdm server client which is now also used for the BgbmEditClient
Andreas Kohlbecker
12:46 PM Revision 044553f6 (utis-core): ref #6151 paging of scientificNameLike and vernacularNameLike search modes in BgbmEditClient client
Andreas Kohlbecker
08:51 AM Revision 1a1fb1f0 (utis-core): ref #6151 paging of scientificNameLike and vernacularNameLike search modes in PLAZI client
Andreas Kohlbecker
08:44 AM Revision 54c8f6e1 (utis-core): ref #6151 paging of scientificNameLike and vernacularNameLike search modes in EUNIS client
Andreas Kohlbecker
 

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