Activity
From 06/27/2019 to 07/26/2019
07/26/2019
- 05:53 PM feature request #8410 (Closed): Add nomenclatural code edition to ruleConsidered in TaxEditor
- for nomenclatural status, name relation (and hybrid relation once it exists).
Make the field only available if rul... - 03:14 PM feature request #8334 (Resolved): Move sources for type designations to details view
- 03:14 PM Revision 0fcac92e (taxeditor): ref #8334 Move sources for type designations to details view
- 03:00 PM Revision 2ac060fb (taxeditor): ref #8334 code cleanup
- 02:51 PM feature request #8135 (Resolved): Implement verbatim type information in TaxEditor
- 02:50 PM Revision 577d6cf2 (taxeditor): ref #8135 Decrease text field size
- 02:47 PM Revision 6fa52600 (taxeditor): ref #8135 Remove designation checkbox from super class
- 02:38 PM bug #8365: DerivedUnitFacadeCacheStrategy should remove collection codes from accession numbers
- Andreas Müller wrote:
> To me there seems to be a misunderstanding. My understanding of #8365#note-8 is that is fine... - 02:19 PM bug #8365: DerivedUnitFacadeCacheStrategy should remove collection codes from accession numbers
- One last question: is the original task of the ticket to deduplicate collection code if necessary now implemented in ...
- 02:13 PM bug #8365: DerivedUnitFacadeCacheStrategy should remove collection codes from accession numbers
- To me there seems to be a misunderstanding. My understanding of #8365#note-8 is that is fine to have brackets for typ...
- 01:58 PM bug #8365: DerivedUnitFacadeCacheStrategy should remove collection codes from accession numbers
- Andreas Kohlbecker wrote:
> Users frequently enter the collection code with the accession number which can cause to ... - 01:50 PM feature request #8180 (In Progress): Add property term "Presence/Absence" to CDM default terms
- As the current solution works for additivity maybe we should postpone creating the two new terms until the above ques...
- 01:46 PM feature request #8180: Add property term "Presence/Absence" to CDM default terms
- Query for above request:
~~~sql
SELECT REPLACE (uri, 'https://terms.tdwg.org/wiki/ft:','')
FROM DefinedTermBase... - 01:31 PM feature request #8180: Add property term "Presence/Absence" to CDM default terms
- Hallo,
ich sehe gerade das folgende Terme doppelt vorkommen in der Ontologie:
"REPLACE (uri, 'https://terms.tdw... - 01:00 PM Revision 78c76c38 (taxeditor): ref #8238 Remove too specific generics from TermTree and TermNode
- 12:28 PM Revision 607b4f94 (cdmlib): add test to cdmlib-cache pom
- 11:35 AM Revision 09092e90 (taxeditor): cleanup
- 11:07 AM task #8166: Adapt dataportal to term structure changes
- Yes, we should at least do a string search for "FeatureTree". Also a string search on "FeatureNode".
- 09:27 AM task #8166 (New): Adapt dataportal to term structure changes
- I am reopening this issue since the data portal code even if being fully functional might need to be adapted to the ...
- 08:53 AM task #8166 (Worksforme): Adapt dataportal to term structure changes
- Andreas Müller wrote:
> Are there any changes needed? Currently it looks like most things work (except maybe for the... - 11:06 AM feature request #8238 (In Progress): Allow interoperability between term trees
- 11:06 AM Revision 97654d95 (cdmlib): ref #8238 Allow adding term subtypes to TermRelationBases
- 10:57 AM feature request #8409 (Closed): add nomenclatural code select to NameRelationField
- see #8398 for details
- 10:55 AM feature request #8408 (Closed): add nomenclatural code select to NomenclaturalStatusRow
- see #8398 for details
- 10:00 AM Revision 9b5133b8 (taxeditor): ref #8135 re-enable textual type designation
- 09:50 AM Revision 5405bf47 (cdmlib): fix problem in CacheLoader
- 09:02 AM Revision a5a2cb3d (cdmlib): Revert "Revert "update cached model for schema version 5.8""
- This reverts commit 6fbe8628082d5f62797062febd0921d93708c275.
- 09:01 AM Revision d6e586ac (taxeditor): Revert "Revert "update test H2 database to schema version 5.8""
- This reverts commit 8b0979c778511b794d7873eda4899db15c8232f3.
- 08:52 AM Revision 8b0979c7 (taxeditor): Revert "update test H2 database to schema version 5.8"
- This reverts commit 50cdece7f361217c57f926555acc006a73d5e151.
- 07:55 AM Revision 6fbe8628 (cdmlib): Revert "update cached model for schema version 5.8"
- This reverts commit 2be44701da8b296a6ac1008376bdda834b2ffd65.
- 01:55 AM Revision be95b04a (cdmlib): minor
- 01:46 AM Revision 5bb3ff87 (cdmlib): cleanup
- 01:28 AM Revision 21410a84 (cdmlib): cleanup
- 01:05 AM Revision 45f16cd4 (cdmlib): minor
- 01:00 AM Revision 5b2a2319 (cdmlib): minor
- 12:56 AM Revision a5d61a3f (cdmlib): minor
- 12:46 AM Revision f2c629ce (cdmlib): minor
- 12:29 AM Revision ead8847b (cdmlib): minor
- 12:11 AM Revision c0951a03 (cdmlib): cleanup TermTree.clone
- 12:11 AM Revision a08b6fbc (cdmlib): cleanup, javadoc and test for notnull check for termtype in TermTree
07/25/2019
- 11:13 PM task #8405: Adapt cdm-vaadin to term structure changes
- Are there any changes needed? Vaadin compiles and does not really make use of TermTree(former FeatureTree) so it is m...
- 10:16 AM task #8405 (Rejected): Adapt cdm-vaadin to term structure changes
- the vaadin editor needs to be adapted to the changes applied in the context of #6794
- 11:10 PM task #8166: Adapt dataportal to term structure changes
- Are there any changes needed? Currently it looks like most things work (except maybe for the Specimen page, is this c...
- 05:42 PM Revision 845a6a70 (taxeditor): ref #6794 Replace FeatureTreeService with TermTreeService
- 04:20 PM Revision 53c7a226 (cdmlib): ref #6794 rename other TermTree.NewInstance methods and set old version to deprecated
- 04:08 PM Revision 2617ad64 (cdmlib): update javadoc for TermTree
- (cherry picked from commit 14b218305dfe9023a44d8c7da6e33715a6ef4ba6)
- 04:08 PM Revision 06de8afc (cdmlib): ref #6794 rename TermTree.NewInstance and set old version to deprecated
- (cherry picked from commit 08b758e2bfba66c82fbc5a636e455edcccb9fa11)
- 03:22 PM Revision 7a26e61a (cdmlib): ref #8407
- 03:21 PM Revision 98b0b483 (cdmlib): remove createDefaultFeatureTree from ITermTreeService
- 03:20 PM Revision 549e8cc5 (cdmlib): ref #6794 rename IFeatureTreeDao in ITermTreeDao
- 02:54 PM task #8336 (Duplicate): Unignore FeatureTest
- 02:50 PM bug #8407 (New): Fix "FeatureTest"
- Fix "FeatureTest" (or may now TermTreeTest) which checks the correkt behavior for exporting (and importing?) TermTree...
- 01:45 PM Revision 160f1cbd (taxeditor): ref #6794 Fix compile error
- 01:16 PM task #8406 (Closed): specimens and occurrence code cleaning and harmonization
- ## cdmlib-remote
issues copied to #8414
## data portal
* There are different kinds of "views" on specimens l... - 12:51 PM Revision ca7468b6 (cdm-dataportal): ref #8403 moving compose_specimens_table_bottom_up() to occurences.inc and renaming parameter in compose_specimen_array()
- 12:48 PM Revision 84849c31 (cdm-dataportal): ref #8403 extracting method compose_specimens_table_bottom_up()
- 12:27 PM Revision 8b7ea5be (taxeditor): ref #8281 adapt TaxEditor test data to doubtful flag in TaxonNode
- 12:25 PM Revision 43613a08 (taxeditor): ref #7334 adapt TaxEditor tests to new schema (delete partial and proparte)
- 11:15 AM Revision 68467d82 (cdm-dataportal): name type designation status bold - adapting tests
- 11:15 AM Revision 6cf1445b (cdm-vaadin): adapt vaadin tests to new schema version
- 11:10 AM Revision ad0a82ca (cdm-vaadin): adapt vaadin tests to new schema version
- 11:04 AM Revision 1f00087f (cdm-dataportal): name type designation status bold
- 11:03 AM Revision c8e1c376 (cdm-vaadin): adapt vaadin tests to new schema version
- 10:53 AM Revision 0f8bf4e9 (cdm-vaadin): update vaadin test H2 to new schema version 5.8
- 10:25 AM Revision 2d6c8502 (cdmlib): commenting doGetTypeDesignationsInHomotypicalGroup() methods which have been comitted too early
- 10:17 AM Revision 2be44701 (cdmlib): update cached model for schema version 5.8
- 10:17 AM Revision 049213b6 (cdmlib): cleanup
- 10:13 AM bug #8395 (Resolved): NullPointerException (NPE) in NameCatalogueController
- Applied in changeset commit:cdmlib|dd4347b628d5737e2682c8d95fcb0e1aff9e7ad7.
- 10:13 AM Revision 10d502dc (cdmlib): ref #8394 adding nameUUIDs to NameCatalogueController responses
- 10:13 AM Revision 9c5bef97 (cdmlib): ref #8394 adding nameUuid to NameCatalogueController responses
- 10:13 AM Revision dd4347b6 (cdmlib): fix #8395 avoiding NPE in NameCatalogueController.getDatasetIdName()
07/24/2019
- 08:13 PM Revision 50cdece7 (taxeditor): update test H2 database to schema version 5.8
- 08:10 PM Revision cb89f4f7 (taxeditor): ref #6794 adapt TaxEditor to new term structure (rename FeatureNode and FeatureTree)
- 07:50 PM feature request #8404 (Resolved): Add update step list within updaters
- 04:23 PM feature request #8404 (Closed): Add update step list within updaters
- currently it is needed to add the step externaly to the step list which leads to errors and requires unnecessary code
- 07:50 PM feature request #8281 (Resolved): Doubtful flag for TaxonNode
- still need to update E+M data
- 07:49 PM bug #4884 (Resolved): Update Reference_AUD.refType to allow NULL
- 07:48 PM feature request #8398 (Resolved): Add nomenclatural code edition to ruleConsidered
- Applied in changeset commit:cdmlib|3b49c84a0287d1f78acb49ff1270a38c679cfd3a.
- 07:44 PM Revision 973dce58 (cdmlib): update H2 test DB
- 07:37 PM Revision bd62ef07 (cdmlib): ref #7470 update script correct keys for TextualTypeDesignation_LanguageString
- 07:36 PM Revision 856dffcf (cdmlib): ref #8404 further cleanup for stepList integration
- 07:34 PM Revision f628f668 (cdmlib): ref #7470 add TextualTypeDesignation to FullCoverageDataGenerator and add Adder to TaxonName
- 06:13 PM Revision d9b56bd4 (cdmlib): ref #4884 allow null for Reference_AUD.refType
- 06:12 PM Revision 68768f85 (cdmlib): ref #4884 unify datatype handling in schema updaters
- 06:11 PM Revision 956f26a0 (cdmlib): cleanup
- 05:15 PM Revision 975de0cc (cdm-vaadin): ref #8397 adding default status message as hint to phycobank index
- 05:09 PM Revision 30e50105 (cdm-vaadin): adding default status message as hint to phycobank index
- 04:24 PM Revision 99e01f35 (cdmlib): ref #8404 Add update step list within updaters
- 02:56 PM feature request #8402 (Closed): ordering typedesignations in name and taxon page
- 02:56 PM feature request #8402 (Resolved): ordering typedesignations in name and taxon page
- Applied in changeset commit:cdm-dataportal|fb939fdc818762b23215321ff183be8700e88161.
- 02:56 PM Revision fb939fdc (cdm-dataportal): fix #8402 fixing broken type designatin compare function
- 02:55 PM Revision 6e2c4f1a (cdm-dataportal): fix 8402 fixing broken type designatin compare function
- 02:45 PM Revision 9c12cb7f (cdm-dataportal): name type designation status bold
- 01:07 PM Revision 2154d631 (cdm-dataportal): typedesignation status and registered name bold also in name page
- 12:18 PM task #8363 (Worksforme): PESI SOAP service seems to return duplicate records
- It turned out that the duplicates are not in the PESI response but that they an effect of an error in the downstram p...
- 12:02 PM task #8363: PESI SOAP service seems to return duplicate records
- I introduced this while I was working on the ticket overview page for Phycobank: https://dev.e-taxonomy.eu/redmine/pr...
- 10:27 AM task #8363: PESI SOAP service seems to return duplicate records
- Interesting that the UTIS project has a category utis ;-)
- 12:01 PM Revision 9cb9a9cf (cdmlib): #8398 add botanical codes prior to 1990
- 11:45 AM Revision 39cb02e8 (cdmlib): minor
- 11:45 AM Revision 7b9ed797 (cdmlib): ref #7334 remove TaxonBase.proParte and partial and ref #8398 add codeEditon to nomStatus and nameRelations
- 11:24 AM Revision c5564cac (cdmlib): ref #6794 remove FeatureNodeService from BatchValidationUtil
- 11:20 AM Revision d10ceac8 (cdmlib): ref #6794 delete FeatureDao
- 11:14 AM Revision 62779ba1 (cdmlib): ref #6794 javadoc update FeatureTree -> TermTree
- 11:13 AM Revision cf4196d1 (cdmlib): ref #6794 some adaptations in Jaxb to FeatureTree -> TermTree
- 11:12 AM Revision 36fc6b9d (cdmlib): ref #6794 adapt jsonConfigurations.xml from FeatureTree/Node -> TermTree/Node
- 11:11 AM Revision 85bfea3a (cdmlib): ref #6794 add TermTreeService and TermNodeService to httpInvokerServices
- 11:10 AM Revision f9e5c38d (cdmlib): ref #6794 remove FeatureTree from some hibernate.cfgs again
- 11:08 AM Revision 1ac56bd8 (cdmlib): ref #8281 add doubtful to TaxonNode (remaining)
- 11:06 AM Revision 7c2426b5 (cdmlib): remove uplaced, excluded, partial and proparte from TaxonBase test data
07/23/2019
- 10:17 PM Revision 4f16dfd5 (cdmlib): ref #8281 add doubtful to TaxonNode
- 08:42 PM Revision 3b49c84a (cdmlib): fix #8398 add nomenclatural code edition to nomStatus, NameRelationship and HybridRelationship and make RuleConsidered an embedded class
- 08:39 PM Revision ec4afe76 (cdmlib): fix potential NPE in GatheringEvent.clone
- 08:38 PM Revision 54fefe54 (cdmlib): cleanup
- 06:45 PM Revision 445df273 (cdm-dataportal): typedesignation status and registered name bold
- 06:38 PM Revision ac31a390 (cdm-dataportal): adding PESI as commented provider option
- 06:37 PM Revision c040bba0 (cdm-dataportal): adding margin to name page name
- 06:03 PM feature request #8403 (Rejected): name page: show types specimens as expandable derivate tree
- In the name page, type specimens used in type designations should be expandable like in the taxon page
- 05:58 PM feature request #8402 (Closed): ordering typedesignations in name and taxon page
- The typedesignation in the name and taxon page are not yet well ordered. The sort order should follow the order of th...
- 04:39 PM bug #6523: Correct display of misspellings in synonymy
- Guten Morgen,
ich bin hinsichtlich einer endgültigen Lösung leidenschaftslos und kann nicht mit eigenen Vorschläg... - 04:15 PM bug #8400 (Closed): scientific names in Aphia client responses are missing authors citation
- 03:49 PM bug #8400 (Closed): scientific names in Aphia client responses are missing authors citation
- 04:14 PM bug #8401 (Closed): WoRMS client returns synonym for accepted name
- 04:14 PM bug #8401 (Resolved): WoRMS client returns synonym for accepted name
- Applied in changeset commit:utis-core|b2cf9c25798fa510b3eda5b8d77630e1da1e9072.
- 03:58 PM bug #8401 (Closed): WoRMS client returns synonym for accepted name
- 04:14 PM Revision b2cf9c25 (utis-core): fix #8401 using accepted name id
- 04:12 PM feature request #8355 (Closed): implement client adapter for phycobank
- 04:12 PM Revision e2d4f39c (utis-core): ref #8400 adding missing authorship information to names
- 04:09 PM feature request #8360 (Worksforme): paging results of /classification/{taxonId}/children webservice
- this has been solved in bug #6151
- 04:06 PM bug #6151 (Closed): implement pager for search service
- 03:33 PM feature request #7975: Implement a block to display name relations
- Andreas Kohlbecker wrote:
> In the developer standup today we almost already decided for adding an enumeration field... - 03:31 PM bug #8399 (New): show nomenclatural code edition for NameRelationship and NomenclaturalStatus
- see #7975#note-31 for details
- 01:27 PM feature request #8398 (Closed): Add nomenclatural code edition to ruleConsidered
- copied from #7975#note-31 :
"... adding an enumeration field to NameRelationship and to NomenclaturalStatus to al... - 01:20 PM feature request #6794 (In Progress): Improve term structure
- 11:27 AM feature request #8396 (New): make "not in classification warning" configurable
once completed remove
~~~css
.messages--warning {
display: none;
}
~~~
from phycobank portal- 11:24 AM task #8392: Types in PhycoBank
- the type status in the name page should be bold but
~~~css
.node-cdm-name .typeDesignations .status {
font-wei... - 07:20 AM Revision c5710844 (utis-core): PhycobankClient linking to dataportal name page, ref #8394
07/22/2019
- 06:42 PM Revision cbfdd05c (cdmlib): ref #6794 ignore FeatureTest
- 06:42 PM Revision d9fa828c (cdmlib): cleanup
- 06:41 PM Revision 2f72f4da (cdmlib): ref #6794 add TermNodeService and TermTreeService and make FeatureXXX services deprecated
- 06:39 PM Revision eb9880a0 (cdmlib): ref #6794 rename some parameters, methods and classes
- 06:13 PM Revision 15baf16b (utis-core): AbstractCdmServerClient responses with taxon.url, ref #8394 - switching back to production server
- 06:06 PM Revision b761d7d6 (utis-core): AbstractCdmServerClient responses with taxon.url, ref #8394
- 06:05 PM Revision 36386216 (cdm-dataportal): ref #8388 UTIS search block: switching to production system for UTIS
- 06:03 PM Revision e27e3ff2 (cdm-dataportal): ref #8388 UTIS search block: linking to taxon urls
- 03:23 PM bug #8395 (Closed): NullPointerException (NPE) in NameCatalogueController
- This NPE problem currently breaks searching for "Planothidium" in phycobank via UTIS
~~~
Caused by: java.lang.Nu... - 03:19 PM feature request #8394 (New): org.cybertaxonomy.utis.tnr.msg.TaxonName add URL field
- For phycobank and other name focused data providers it is crucial that the name url and identifier can be transported...
- 02:42 PM feature request #8180 (Feedback): Add property term "Presence/Absence" to CDM default terms
- 01:38 PM Revision 11bdf5c4 (cdmlib): ref #6794 rename TermTreeNode -> TermNode
- 01:37 PM Revision 77dad5ec (cdmlib): ref #6794 rename getFeatureNode -> getTermNode in cdmlib-print
- 01:35 PM Revision 41061791 (cdmlib): ref #6794 rename TermTreeNode -> TermNode
- 01:32 PM Revision 10ae9cf0 (cdmlib): ignore ConfigFileUtilTest.testGetFolderSeperator
- 01:31 PM Revision 76463827 (cdmlib): ref #6794 rename TermTreeNode -> TermNode
- 12:23 PM Revision cd1003b3 (cdm-dataportal): Merge tag '5.8.1' into develop
- tagging hotfix 5.8.1
- 12:22 PM Revision 485045db (cdm-dataportal): Merge branch 'hotfix/5.8.1'
- 12:13 PM Revision 85669a85 (cdm-dataportal): ref #7975 implementing settings for name relationship lists - all name rels enabled by default
- 12:08 PM Revision 74b1edb3 (cdm-dataportal): ref #8347 fixing wrong projection transformation for data maps - improved version
- 08:28 AM feature request #8390 (In Progress): implement /portal/name/{uuuid}/typeDesignationsInHomotypicalGroup
- 08:05 AM bug #8393 (New): restarting utis-webapp causes OverlappingFileLockException
- This happens after changing the last updated timestamp of the '/etc/jetty8/contexts/eubon-utis-1.3.xml'
~~~
java.... - 07:48 AM bug #8340 (New): is accepted for Footnotes missing and with wrong index
- I think there is nothing to do about this ticket as long #8339 is not decided by 100%.
07/19/2019
- 11:28 PM Revision 3af337bb (cdmlib): ref #6794 finalize FeatureTreeMover (update treeindex)
- 11:19 PM Revision d621df66 (cdmlib): minor
- 10:24 PM Revision 74d92b60 (cdmlib): ref #6794 minor adaptations of tests
- 09:13 PM Revision 40b05355 (cdmlib): ref #6794 remove duplicate TermRelationshipType in test/hibernate.cfg.xml
- 09:03 PM Revision ab5b84ab (cdmlib): ref #6794 remove FeatureTree from hibernate.cfg
- 08:57 PM Revision 0774bb03 (cdmlib): ref #6794 remove FeatureTree class
- 08:45 PM Revision 3048fbc9 (cdmlib): ref #6794 add TermRelation and rename FeatureNode -> TermTreeNode
- ref #6794 add TermRelation and TermRelationBase
- 08:42 PM Revision 17ad77a7 (cdmlib): ref #6794 add TermRelation and rename FeatureNode -> TermTreeNode
- 08:42 PM Revision b996fc8c (cdmlib): cleanup and ref #6794 rename TermTreeDaoImpl
- 08:42 PM Revision 645aca37 (cdmlib): ref #6794 add TermCollection and subclasses including TermTree
- 08:42 PM Revision 12740fe1 (cdmlib): ref #6794 change FeatureTree to TermTree
- 08:42 PM Revision 0d80c92f (cdmlib): ref #6794 add TermRelation and rename FeatureNode -> TermTreeNode
- 08:41 PM Revision e793a739 (cdmlib): ref #6794 update some imports to model changes and add ITermTree
- 06:14 PM Revision cf862eed (cdmlib): ref #6794 FeatureTreeMover first implementation (not yet ready)
- 06:14 PM Revision b153def6 (cdmlib): minor
- 06:14 PM Revision a2533432 (cdmlib): ref #6794 change schema version and add missing attributes to updateScript
- 06:14 PM Revision 0d79c535 (cdmlib): ref #6794 remove references to TermVocabulary.iterator()
- 06:14 PM Revision b61431ee (cdmlib): ref #8336 ignore FeatureTest
- 06:14 PM Revision 94907e20 (cdmlib): ref #6794 adapt TermCollection test data to boolean values in TermCollection
- 06:14 PM Revision 5ed46cc2 (cdmlib): add SchemaUpdater_55_58
- 06:14 PM Revision def33852 (cdmlib): ref #6794 add TermCollection and subclasses including TermTree
- 06:14 PM Revision b72678a6 (cdmlib): ref #6794 change FeatureTree to TermTree
- 06:14 PM Revision ec978653 (cdmlib): ref #6794 add TermRelation and rename FeatureNode -> TermTreeNode
- 06:14 PM Revision 18dfe77e (cdmlib): ref #6794 move term relations down to TermCollection
- 06:14 PM Revision 502547d1 (cdmlib): ref #6794 fix FeatureNodeServiceImplTest
- 06:14 PM Revision 810bbc08 (cdmlib): revert ClearDBDataSet to BlankDataSet to avoid foreign key problems during test data creation in SDDImportTest
- 06:14 PM Revision 4e5c4e73 (cdmlib): cleanup and ref #6794 rename TermTreeDaoImpl
- 06:14 PM Revision c27ce9cc (cdmlib): ref #6794 update script for graph_id and root_id
- 06:14 PM Revision 0761f817 (cdmlib): replace BlankDataSet.xml by ClearDBDataSet.xml
- 06:14 PM Revision 0d603043 (cdmlib): cleanup
- 06:14 PM Revision 1cc29785 (cdmlib): ref #6794 adjust hibernate configuration to new TermCollection and adjust test data
- 06:14 PM Revision 11df83d8 (cdmlib): ref #6794 add TermCollection and subclasses including TermTree
- 06:14 PM Revision b3340748 (cdmlib): ref #6794 change FeatureTree to TermTree
- 06:14 PM Revision 4b1a00be (cdmlib): ref #6794 update script for name changes in FeatureNode and TermVocabulary
- 06:13 PM Revision 2a933a18 (cdmlib): adapt SchemaUpdater to v5.5.1
- 06:13 PM Revision 3c06156c (cdmlib): ref #6794 rename TermVocabulary table to TermCollection and remaining rename FeatureNode -> TermTreeNode
- 06:13 PM Revision 3de5dbd5 (cdmlib): update service/dataset.xsd location
- 06:13 PM Revision 951c829f (cdmlib): ref #6794 add TermRelation and rename FeatureNode -> TermTreeNode
- 06:13 PM Revision 1c313fd1 (cdmlib): ref #6794 add TermRelation and TermRelationBase
- 06:13 PM Revision aa929473 (cdmlib): ref #6794 add term relation type to TermType and fix TermRelationType class
- 06:13 PM Revision 6645143a (cdmlib): ref #6794 adapt TermsDataSet-with_auditing_info in some packages after merge problem solved
- 06:13 PM Revision 28fc4fe7 (cdmlib): ref #8128 comment changes temporarily to make them compile
- 06:13 PM Revision cafaa5dd (cdmlib): ref #6794 add TermRelationshipType to test data
- 06:13 PM Revision 7c4fffcd (cdmlib): ref #6794 add TermRelationshipType
- 06:13 PM Revision 2f8559af (cdmlib): cleanup
- 06:13 PM Revision cf792057 (cdmlib): ref #7514 adapt MAN symbol to portal tests
- 06:13 PM Revision ae1cff7e (cdmlib): preparation for Feature.supportedClasses
- 06:13 PM Revision c220794b (cdmlib): ref #7514 update misapplied name symbols again
- 06:13 PM Revision ba7d0c9a (cdmlib): Add SchemaUpdater_55_551
- 04:38 PM bug #8340: is accepted for Footnotes missing and with wrong index
- Don't know what kind of feedback is needed from my side?
- 04:27 PM feature request #8134: Implement verbatim type information in dataportal
- related to issues in 5.9 so maybe we can implement it then
- 04:13 PM feature request #8354: taxonomic registration search by name finds also typifications for this name
- correct!
- 03:53 PM feature request #8354: taxonomic registration search by name finds also typifications for this name
- to me seems to be a cdmlib ticket, not cdm
- 04:12 PM task #7296: externalize redmine api key
- it is! The changes have been made in `cdmlib-ext/src/test/resources/services-external.properties`
- 03:55 PM task #7296: externalize redmine api key
- this is not a cdm ticket, please change category if cdmlib is also not correct
- 03:30 PM Revision 2674d5ca (cdm-server): Merge branch 'release/5.8.0' into develop
- 03:30 PM Revision 947103be (cdm-server): jenkins merging release branch into master (strategy: theirs)
- 03:29 PM Revision a00fbdfa (cdm-server): updating poms for branch'release/5.8.0' with non-snapshot versions
- 03:28 PM Revision 45444313 (cdm-webapp): Merge branch 'release/5.8.0' into develop
- 03:28 PM Revision 82e5eca3 (cdm-webapp): jenkins merging release branch into master (strategy: theirs)
- 03:28 PM Revision 80b60b0b (cdm-webapp): updating poms for branch'release/5.8.0' with non-snapshot versions
- 03:28 PM Revision e2ea078b (cdm-webapp): jenkins bumping cdmlib.version and cdm.vaadin.version to 5.8.0
- 03:27 PM bug #6627 (Feedback): Remaining cdm light issues
- should we close this ticket and create a new remaining (II) ticket with the now open issues.
Most of the tasks hav... - 03:19 PM Revision 598fbcc2 (cdm-dataportal): Merge branch 'release/5.8.0' into develop
- 03:19 PM Revision 1e0c0555 (cdm-dataportal): updating poms for branch'release/5.8.0' with non-snapshot versions
- 03:18 PM Revision 07bb851f (cdm-dataportal): release-preparation: production level css
- 03:18 PM Revision 8e8cd135 (cdm-vaadin): Merge branch 'release/5.8.0' into develop
- 03:18 PM Revision f7afd110 (cdm-vaadin): jenkins merging release branch into master (strategy: theirs)
- 03:15 PM Revision e7aa1173 (cdm-vaadin): updating poms for branch'release/5.8.0' with non-snapshot versions
- 03:15 PM Revision 6bd46cc3 (cdm-vaadin): jenkins bumping cdmlib.version to 5.8.0
- 03:14 PM Revision 3c373afd (taxeditor): Merge branch 'release/5.8.0' into develop
- 03:14 PM Revision 0645911c (taxeditor): Merge branch 'release/5.8.0'
- 03:13 PM feature request #8273 (Feedback): abcd import: check for all specimen for DNA in DNABank
- Is this already implemented? It has a commit.
- 03:12 PM Revision f50c5671 (cdmlib): Updating develop poms back to pre merge state
- 03:12 PM Revision 51a0fa9a (cdmlib): Merge branch 'master' into develop
- 03:12 PM Revision d10f48ed (cdmlib): updating develop poms to master versions to avoid merge conflicts
- 03:11 PM Revision 79e62164 (cdmlib): Merge branch 'release/5.8.0'
- 03:11 PM feature request #8322 (Feedback): add sortindex to cdm light export
- Isn't this already implemented. Review?
- 03:08 PM bug #8088 (Feedback): Open taxon node wizard issues
- can we close this and create a new ticket with open issues? There are already several commits on this ticket.
Let me... - 03:07 PM feature request #8182: show blast search result
- is this ready or should we create ticket for open issues?
- 03:04 PM feature request #8388 (Closed): UTIS search block
- completed
- 03:04 PM feature request #8344 (In Progress): Cdm light export: add dummy line in simple facts table
- is this fixed already? Please move to 5.10 if not
- 02:58 PM bug #8313: Multiple categorical data get deleted when clicked on in Character Matrix
- Move back to 5.8 as this seems to be ready in 5.8 milestone
- 02:52 PM Revision 2e017144 (cdmlib): updating poms for branch'release/5.8.0' with non-snapshot versions
- 02:49 PM Revision 1ec5ac22 (cdm-dataportal): ref #8388 UTIS search block: handling empty records and feedback on no results
- 02:48 PM Revision 1861c83d (cdm-dataportal): ref #8388 UTIS search block: handling empty records and feedback on no results
- 02:29 PM Revision 3b9b1523 (cdm-webapp): jenkins bumping cdmlib.version and cdm.vaadin.version to 5.8.0-SNAPSHOT
- 02:29 PM Revision be362251 (cdm-webapp): updating poms for 5.9.0-SNAPSHOT development
- 02:28 PM Revision 7071ef95 (cdm-webapp): jenkins bumping cdmlib.version and cdm.vaadin.version to 5.9.0-SNAPSHOT
- 02:27 PM Revision 0809fa50 (cdm-vaadin): jenkins bumping cdmlib.version to 5.8.0-SNAPSHOT
- 02:26 PM Revision 3f0ec1ee (cdm-vaadin): updating poms for 5.9.0-SNAPSHOT development
- 02:26 PM Revision e919d9f8 (cdm-vaadin): updating poms for 5.8.0 branch with snapshot versions
- 02:26 PM Revision 7de1009c (cdm-vaadin): jenkins bumping cdmlib.version to 5.9.0-SNAPSHOT
- 02:26 PM Revision 834c0fd2 (cdm-server): updating poms for 5.9.0-SNAPSHOT development
- 02:19 PM task #8392 (Worksforme): Types in PhycoBank
- >This layout is okay except of the dot at the end. If special types are concatenated ".;" should be avoided.
This ... - 02:16 PM task #8391 (In Progress): Name page shows complete name information (II)
- 02:11 PM task #8391 (In Progress): Name page shows complete name information (II)
- Continue #8108:
Remaining issues:
2. Inhaltlich sollten folgende Angaben zu sehen sein:
* ~~Taxa~~
... - 02:13 PM feature request #8108 (Resolved): Name page shows complete name information (I)
- copied remaining issues to new ticket to review and close this ticket for current milestone.
- 02:03 PM Revision 909ca8e0 (taxeditor): Updated version in pom / project files to taxeditor version : 5.9.0-SNAPSHOT and cdmlib version : 5.9.0-SNAPSHOT
- 02:03 PM Revision 076f3a94 (taxeditor): Updated version in pom / project files to taxeditor version : 5.8.0 and cdmlib version : 5.8.0
- 02:03 PM Revision d1eb8075 (cdm-vaadin): updating poms for 5.9.0-SNAPSHOT development
- 02:03 PM Revision 6a1b9a03 (cdm-vaadin): updating poms for 5.8.0 branch with snapshot versions
- 02:02 PM Revision 0abb074a (cdm-vaadin): jenkins bumping cdmlib.version to 5.9.0-SNAPSHOT
- 02:02 PM Revision 33dbd082 (cdm-dataportal): updating poms for 5.9.0-SNAPSHOT development
- 01:59 PM Revision 01423b1e (cdmlib): updating poms for 5.9.0-SNAPSHOT development
- 01:43 PM bug #6523 (In Progress): Correct display of misspellings in synonymy
- 10:55 AM bug #6523: Correct display of misspellings in synonymy
- @Walter: could you please check if Nepenthes tupmanniana is really meant to be a misspelling or is it rather a homony...
- 10:53 AM bug #6523: Correct display of misspellings in synonymy
- Hallo,
danke Henning für die Hinweise. Ich nehme mal einige weitere Leute mit ins Ticket, da dies sowohl von allge... - 01:38 PM Revision 24bff82e (cdm-dataportal): ref #8388 UTIS search block: better labels for providers
- 12:21 PM Revision bcb1dad5 (cdm-dataportal): ref #7975 implementing settings for name relationshiop lists - removing filter and offering all relation types
- 12:10 PM Revision a4f9d5b0 (cdm-dataportal): ref #7975 implementing settings for name relationshiop lists; new name page layout settings section
- 11:40 AM feature request #8304: Name page redirects to according taxon depending on query parameter
- I don't think that these requirements are contradict the current implementation with the 'global' switch. As far as I...
- 11:30 AM feature request #8304: Name page redirects to according taxon depending on query parameter
- As far as I remember there is already a user request for this. At least I have discussed it with users.
Also I thin... - 09:31 AM bug #6380 (Closed): typedesignations missing in homotypic group
- 09:30 AM bug #6380: typedesignations missing in homotypic group
- Andreas Müller wrote:
> Until then why can't we use a ws call that collects all type designations of a single name i... - 09:08 AM bug #6380: typedesignations missing in homotypic group
- Until then why can't we use a ws call that collects all type designations of a single name in the homotypic group for...
- 08:49 AM bug #6380: typedesignations missing in homotypic group
- Andreas Müller wrote:
> The result seems to be correct. Do I understand the code correctly that you only call 1 webs... - 08:04 AM bug #6380 (Feedback): typedesignations missing in homotypic group
- The result seems to be correct. Do I understand the code correctly that you only call 1 webservice per homotypical gr...
- 09:29 AM feature request #8390 (Closed): implement /portal/name/{uuuid}/typeDesignationsInHomotypicalGroup
- copied from #6380.
This webservice should be used to speed up `type_designations_for_synonymy_group($synonymy_grou... - 09:13 AM feature request #7932: Implement subject resolver for CdmPreferences
- Andreas Kohlbecker wrote:
> Andreas Müller wrote:
> > Andreas K., do you already use the subject resolver in the pr... - 08:32 AM feature request #7932: Implement subject resolver for CdmPreferences
- Andreas Müller wrote:
> Andreas K., do you already use the subject resolver in the preference cache you use for vaad... - 09:11 AM task #4177 (Closed): display of name relationships in synonymy broken
- 08:33 AM task #4177 (Feedback): display of name relationships in synonymy broken
- So if this ticket is not about the comments in #note-3 and #note-4 but only about repairing and optimizing the name r...
- 08:05 AM Revision 502063b4 (cdm-dataportal): fixing broken link in settings
07/18/2019
- 10:41 PM Revision 579bc6e3 (cdm-dataportal): ref #8388 UTIS search block: fixing layout bug
- 08:49 PM feature request #7920: Possibility to define area specific status selection
- An open issue is that it should also be available for local prefs (where it is maybe more difficult to implement beca...
- 06:40 PM feature request #7920 (Feedback): Possibility to define area specific status selection
- To me this looks like being solved including the open issues. Please check and move open issues to a new ticket if ne...
- 08:46 PM feature request #8045: Improve handling of default values and override in local preferences
- with the new implementation of distribution status with different subjects if allowOverride=false in DB prefs this do...
- 08:04 PM feature request #8045: Improve handling of default values and override in local preferences
- For the above issues see also #8323#note-4
- 04:21 PM feature request #8045: Improve handling of default values and override in local preferences
- Andreas Müller wrote:
> Choosing "default" for local preference "nomenclatural status" has no effect. It uses the ex... - 01:26 PM feature request #8045: Improve handling of default values and override in local preferences
- For nomencl.Code. implementation is still missing or incorrect. Also we may discuss if in DB prefs we should allow "U...
- 01:09 PM feature request #8045: Improve handling of default values and override in local preferences
- Choosing "default" for local preference "nomenclatural status" has no effect. It uses the explicitly chosen values fr...
- 01:06 PM feature request #8045 (Feedback): Improve handling of default values and override in local preferences
- Looks like this has been implemented in 5.8 so I switch milestone.
Are there open issues? - 08:30 PM bug #8389 (Resolved): Correct handling of default values with allowOverride=false
- It looks like currently the preferences are deleted no matter what the allowOverride value is. But if it is "false" s...
- 08:10 PM bug #8385: Open issues in DB preferences
- the above both fixes seem to work (though the last is only a workaround for a real fix (full delete of the preference))
- 05:55 PM bug #8385: Open issues in DB preferences
- Patrick Plitzner wrote:
> Wouldn't it be better to just delete the preference if the config is `null`. `null` means... - 05:54 PM bug #8385: Open issues in DB preferences
- Andreas Müller wrote:
> >io.ABCD.config is stored in DB with value NULL even if nothing has changed, if this is defa... - 04:33 PM bug #8385: Open issues in DB preferences
- >io.ABCD.config is stored in DB with value NULL even if nothing has changed, if this is default value, the default sh...
- 01:45 PM bug #8385: Open issues in DB preferences
- After setting Publish Flag to default and reopening:
~~~
login : admin
editor version : 5.8.0.201907180811
serv... - 01:39 PM bug #8385: Open issues in DB preferences
- Patrick, can you have a look?
- 01:34 PM bug #8385 (Closed): Open issues in DB preferences
- * ~~Values on General page (Export/Import, Checklist perspective, Taxonnode Wizard) are not loaded correctly when reo...
- 07:54 PM feature request #8256: Show all status preferences as table
- CRITICAL:
Updating an existing list does not seem to work anymore. If I update and reopen the dialog everything is... - 07:04 PM feature request #8256 (Feedback): Show all status preferences as table
- By the way: if no area is selected the subject is /taxeditor which does not make much sense. It should be only "/". A...
- 06:53 PM feature request #8256: Show all status preferences as table
- In general this seems to work and is a great feature. Some minor issues: the table should show up below the status se...
- 07:32 PM feature request #8323: Make nom.status and rank lists a CdmPreference
- If I open a name which has a rank that is not available in the rank list, the rank is added to the list of available ...
- 07:29 PM feature request #8323: Make nom.status and rank lists a CdmPreference
- Also the prefs seem to work only after restarting TaxEditor. Maybe this is the main reason for the above mentioned is...
- 07:11 PM feature request #8323 (Feedback): Make nom.status and rank lists a CdmPreference
- Override handling does not yet work correctly for both of them. See #8045#note-9 and #8045#note-13
- 06:32 PM feature request #8058: Further issues for (local) preferences
- Maybe we should split this ticket.
- 05:45 PM feature request #8058 (Feedback): Further issues for (local) preferences
- Katja Luther wrote:
> the common name language preference is added.
Can we still move "Available Languages" below... - 06:31 PM feature request #8293: Distribution preferences for details view should be serverside preferences
- Beside these issues the implementation works correctly as it looks like. This gives more consistency to data and UI.
- 06:30 PM feature request #8293: Distribution preferences for details view should be serverside preferences
- Is there a reason why if used in distribution editor, the Status field and the modifying text field in details view i...
- 06:27 PM feature request #8293 (Feedback): Distribution preferences for details view should be serverside preferences
- 06:27 PM feature request #8293: Distribution preferences for details view should be serverside preferences
- The preference menu is not correct. You put it to UI-DistributionData-VocsAndStatus
UI is only for UI! (as the nam... - 06:13 PM feature request #8293: Distribution preferences for details view should be serverside preferences
- The fix seems to work. Katja, can you please check, why empty strings are possible here. It is a bit strange. In the ...
- 05:27 PM feature request #8293: Distribution preferences for details view should be serverside preferences
- Andreas Müller wrote:
> This error is a blocker!!
I tried to fix with 955fadf4. Will see if it works
- 05:12 PM feature request #8293: Distribution preferences for details view should be serverside preferences
- This error is a blocker!!
- 05:11 PM feature request #8293: Distribution preferences for details view should be serverside preferences
- When trying to edit a distribution in facts view I get an IAE:
~~~
login : admin
editor version : 5.8.0.20190718... - 06:04 PM feature request #8383 (Closed): Add CORS header
- 05:53 PM feature request #8383 (Resolved): Add CORS header
- Applied in changeset commit:utis-webapp|c16dc4758af86cb502dfc7f6687fdc4c8c5c5c4a.
- 11:12 AM feature request #8383 (Closed): Add CORS header
- 06:01 PM Revision 72dc91d6 (cdm-dataportal): ref #8388 block to search UTIS implemented - removing debug code
- 05:53 PM Revision c16dc475 (utis-webapp): fix #8383 adding CORSE headers
- 05:52 PM Revision 0aebb4bc (taxeditor): ref #8293 try to fix IAE in Distribution Details View if status pref exists
- 05:52 PM Revision 86c96664 (utis-core): better metadata on phycobank
- 05:51 PM Revision 793ded33 (taxeditor): ref #8385 Fix potential NPE
- 05:45 PM feature request #8388 (Resolved): UTIS search block
- Applied in changeset commit:cdm-dataportal|c05d1cfbddb1d4e5942efc85201405814a0f9a22.
- 05:44 PM feature request #8388 (Closed): UTIS search block
- implement a Drupal block which allows using the UTIS service
- 05:45 PM Revision c05d1cfb (cdm-dataportal): fix #8388 block to search UTIS implemented
- 05:41 PM Revision 2393d9c5 (cdm-dataportal): upgrading to fontawesome 5.9.0
- 05:37 PM Revision cf115b19 (taxeditor): ref #8385 Remove publish flag preference when set to default
- 05:37 PM Revision 34ec6317 (taxeditor): ref #8192 Expand media section by default
- 05:25 PM Revision 955fadf4 (taxeditor): ref #8293 try to fix IAE in Distribution Details View if status pref exists
- 04:20 PM bug #8375: ReferenceEllypsisFormatter produces too long strings in specific cases
- Problem: long book titles, especially if the reference is part of book.
Example longest in book - reference
![]... - 04:19 PM feature request #7932: Implement subject resolver for CdmPreferences
- Andreas K., do you already use the subject resolver in the preference cache you use for vaadin?
- 04:18 PM bug #7849: Improve DB Preferences handling and saving in TaxEditor
- To me this ticket seems to be fixed and open issues are moved to new tickets. In general the structure for handling d...
- 03:54 PM bug #7849: Improve DB Preferences handling and saving in TaxEditor
- Andreas Müller wrote:
> On local prefs Name Details View page the "Restore Defaults" button seems to be enabled even... - 03:52 PM bug #7849: Improve DB Preferences handling and saving in TaxEditor
- Andreas Müller wrote:
> With empty preferences when only the DistrEditor page is opened without any change afterward... - 03:05 PM bug #8386 (Closed): Disable admin menu when not logged into a DB
- currently it is shown after (re)start which does not make sense as admin functionality is always related to DB login.
- 01:14 PM feature request #8384 (New): Consider to use icon links for all reference citations
- Candidates:
* Bibliography - 01:13 PM feature request #8320 (Closed): Links to reference page as appendend icon instead of having the whole citation as link
- Andreas Müller wrote:
> Do we have any rules where these icons are used? E.g. in the bibliography they do not seem t... - 12:39 PM feature request #8320: Links to reference page as appendend icon instead of having the whole citation as link
- Do we have any rules where these icons are used? E.g. in the bibliography they do not seem to be used yet though it m...
- 12:37 PM feature request #8320: Links to reference page as appendend icon instead of having the whole citation as link
- Andreas Kohlbecker wrote:
> And this one
>
> http://test.e-taxonomy.eu/dataportal/preview/cichorieae/cdm_datapor... - 08:13 AM feature request #8320: Links to reference page as appendend icon instead of having the whole citation as link
- And this one
http://test.e-taxonomy.eu/dataportal/preview/cichorieae/cdm_dataportal/taxon/a67fc2ab-1452-4c32-84b6... - 08:05 AM feature request #8320: Links to reference page as appendend icon instead of having the whole citation as link
- http://int.e-taxonomy.eu/dataportal/integration/reference/cdm_dataportal/taxon/c246856f-c03e-4cb7-ac92-d9b2864084cd
... - 12:51 PM feature request #8294 (Closed): Make display of ID in source and ID Namespace configurable
- translated preferences. Closing the ticket.
- 12:12 PM feature request #8294 (Feedback): Make display of ID in source and ID Namespace configurable
- All the rest seems to work and looks ok.
- 12:08 PM feature request #8294: Make display of ID in source and ID Namespace configurable
- same in local preference (if this is different code)
- 12:06 PM feature request #8294: Make display of ID in source and ID Namespace configurable
- Server side preferences are not yet translated (Submenu Sources and Labels on page) (update code before changing as ...
- 12:49 PM Revision ddaac84e (taxeditor): ref #8294 i18n for plugin.xml
- 12:38 PM Revision 7ec03c92 (taxeditor): ref #8294 i18n
- 12:05 PM Revision 22f28ff0 (taxeditor): change label for ID Namespace
- 11:31 AM bug #8260 (Closed): Details and Supplemental Data View do not save the expansion state of sections
- 10:41 AM bug #8260: Details and Supplemental Data View do not save the expansion state of sections
- Fix 20b35d99 seems to solve the problem. I think we can close the ticket.
- 10:55 AM bug #8129: Load images asynchronously in media details view
- Andreas Müller wrote:
>...
> * the size of the image is recomputed, most often the size can be computed from metada... - 10:52 AM bug #8129: Load images asynchronously in media details view
- Andreas Müller wrote:
> Also when switing between 2 entries in bulk editor with <2sec between switches often the ent... - 10:46 AM bug #8129: Load images asynchronously in media details view
- The expand problem seems to be solved (see #8260). Final question: what is the default. I suggest to have "expanded" ...
- 12:51 AM bug #8129: Load images asynchronously in media details view
- Please test intensively e.g. with the 2 given media if the behavior is as you would expect for rapid data entry and c...
- 12:50 AM bug #8129: Load images asynchronously in media details view
- The loading does not stop immediately when a new URL is entered but should. Otherwise an image is shown which does no...
- 12:48 AM bug #8129: Load images asynchronously in media details view
- Andreas Müller wrote:
> Also when switing between 2 entries in bulk editor with <2sec between switches often the ent... - 12:44 AM bug #8129: Load images asynchronously in media details view
- Also when switing between 2 entries in bulk editor with <2sec between switches often the entries are not selected any...
- 12:42 AM bug #8129: Load images asynchronously in media details view
- Hmm, sometimes it works but most often it does not. Looks like you have at least to open a new bulk editor to make it...
- 12:07 AM bug #8129: Load images asynchronously in media details view
- Patrick Plitzner wrote:
> Andreas Müller wrote:
> > Now, the media details view is always collpased and the state i... - 10:42 AM bug #8374: Save genus generated for a species with a different reference
- Problem with bibliographic reference Part of Book.
hint: Book titel co... - 10:34 AM bug #6523: Correct display of misspellings in synonymy
- Als unbeteiligter Leser halte ich die Ausgabe für sachlich falsch oder zumindes für unverständlich. Erst mit externer...
- 10:04 AM Revision 3b069ad4 (taxeditor): ref #8129 Handel widget disposed exceptions
- 10:00 AM Revision 20b35d99 (taxeditor): ref #8260 Fix string comparison
- 08:16 AM bug #8287 (Closed): RegistrationServiceImpl.page( .... Collection<UUID> typeDesignationStatusUuids ... ) fails when NULL and UUIDs are passed
- 08:13 AM feature request #8304: Name page redirects to according taxon depending on query parameter
- This is a misunderstanding. During the standup yesterday I was talking about a global switch which overrides the defa...
07/17/2019
- 08:54 PM feature request #7408 (In Progress): [E+M] Support for preferred common names in data portal
- we may discuss, if we simply use different features for th different common names. Therefore I take this ticket and a...
- 07:28 PM bug #8287: RegistrationServiceImpl.page( .... Collection<UUID> typeDesignationStatusUuids ... ) fails when NULL and UUIDs are passed
- combination of types and none are searchable without errors in Vaadin and the portal. If this is the feedback for thi...
- 07:12 PM bug #8231 (Worksforme): Name relation non
- 07:07 PM task #5857 (Closed): show nomenclatural status for for representations of TaxonName
- 06:56 PM bug #8365 (Closed): DerivedUnitFacadeCacheStrategy should remove collection codes from accession numbers
- ok, so i am closing this issue now
- 05:22 PM bug #8365: DerivedUnitFacadeCacheStrategy should remove collection codes from accession numbers
- In the Youngia example the version with brackets is clearer.
- 09:02 AM bug #8365 (Feedback): DerivedUnitFacadeCacheStrategy should remove collection codes from accession numbers
- 09:02 AM bug #8365: DerivedUnitFacadeCacheStrategy should remove collection codes from accession numbers
- removing the parentheses would affect all portals. Before doing this we should keep the effect on other portals in mi...
- 06:45 PM feature request #8294 (Resolved): Make display of ID in source and ID Namespace configurable
- All issues should be fixed now.
What still would be nice is if the disabled local preferences would reflect the st... - 06:45 PM bug #8382 (Closed): Local Supplemental Data Source Preferences should reflect the state of admin preferences
- Copied from #8294:
"What still would be nice is if the disabled local preferences would reflect the state of the a... - 06:30 PM Revision 660c3f90 (taxeditor): ref #8294 Swap showIdInSource and ShowIdNamespace
- 06:07 PM task #8209: use ellypsed references for all reference comboboxes
- last screen shot was misuse of an in-reference
- 06:06 PM task #8209: use ellypsed references for all reference comboboxes
- Minor problem,
Name editor if a new bibliographic reference is entered with a very long title.
 - 05:40 PM task #8209: use ellypsed references for all reference comboboxes
- Name Editor with "Nomenclatural reference" is working. No problem because the maximum breadth of the drop down is siz...
- 07:58 AM task #8209: use ellypsed references for all reference comboboxes
- I copied the latest problem to a new ticket: #8375
Did you check all editors with reference comboboxes? Is ellypsi... - 05:59 PM bug #8381 (Closed): Closing the details view throws widget is disposed exception
- steps to reproduce:
1. Open editor
1. Connect
1. Open a taxon
1. Close details view
Note: The exception is n... - 05:45 PM feature request #8245 (Closed): Improve representation of DescriptionElementBase.timeperiod
- The formatting of year only or year and month only looks ok now so we can close the ticket. Other open issues will be...
- 05:45 PM bug #8375: ReferenceEllypsisFormatter produces too long strings in specific cases
- Die bibliographische Referenz (Journal) wird hier nicht abgekürzt. Je kürzer der Journal title desto eher Verwechselu...
- 08:04 AM bug #8375: ReferenceEllypsisFormatter produces too long strings in specific cases
- This could an effect of the changes which have been applied for #8375
- 07:55 AM bug #8375 (New): ReferenceEllypsisFormatter produces too long strings in specific cases
- Again there are extremely long entries. The breadth of the dropdown box differs extremly. (was originally reported in...
- 05:27 PM feature request #8304 (Feedback): Name page redirects to according taxon depending on query parameter
- I do not fully understand this solution. I thought it should be configurable for each location that has a link to a n...
- 05:14 PM feature request #8320 (Feedback): Links to reference page as appendend icon instead of having the whole citation as link
- Is there an example somewhere on test server or integration?
- 05:06 PM bug #8260: Details and Supplemental Data View do not save the expansion state of sections
- Andreas Müller wrote:
> Patrick Plitzner wrote:
> > Andreas Müller wrote:
> > > Now, nomenclatural reference is ne... - 04:33 PM bug #8260: Details and Supplemental Data View do not save the expansion state of sections
- Patrick Plitzner wrote:
> Andreas Müller wrote:
> > Now, nomenclatural reference is never expanded. Maybe it was li... - 11:03 AM bug #8260: Details and Supplemental Data View do not save the expansion state of sections
- Andreas Müller wrote:
> Now, nomenclatural reference is never expanded. Maybe it was like this before already and I ... - 04:58 PM bug #8129: Load images asynchronously in media details view
- Andreas Müller wrote:
> Now, the media details view is always collpased and the state is not saved - at least if I c... - 04:43 PM bug #8129 (Feedback): Load images asynchronously in media details view
- Now, the media details view is always collpased and the state is not saved - at least if I choose the above mentioned...
- 10:36 AM bug #8129 (Resolved): Load images asynchronously in media details view
- Implemented asynchronous loading in advanced media view.
Opened another ticket for placeholder image -> #8378 - 04:56 PM feature request #8283 (Closed): Allow adding media to terms in taxeditor
- Created new ticket for remaining issues -> #8380
- 04:31 PM feature request #8283: Allow adding media to terms in taxeditor
- Patrick Plitzner wrote:
> Just when I wrote the last comment it happened. But still, it is very unlikely that this w... - 10:56 AM feature request #8283: Allow adding media to terms in taxeditor
- Just when I wrote the last comment it happened. But still, it is very unlikely that this will happen to a user. We ma...
- 10:51 AM feature request #8283: Allow adding media to terms in taxeditor
- Andreas Müller wrote:
> Patrick Plitzner wrote:
> > Andreas Müller wrote:
> > > The data may got lost the followin... - 04:56 PM bug #8380 (New): Unsaved media gets lost in details view
- Copied from #8283:
On rem_conf_am open features.
* Got to Vocabulary "Untitled" and open term "test2".
* Open ... - 02:27 PM Revision b91b98c5 (taxeditor): ref #8294 Move supplemental data source preferences to sub menu
- 01:52 PM Revision 456115c5 (taxeditor): ref #8294 Add missing "Show UUID/ID" option to preference
- 01:19 PM Revision 31457bf1 (taxeditor): ref #8294 code cleaning
- 12:04 PM Revision 8d5d43cb (utis-client): updating documentation on templates
- 11:54 AM Revision 1ff06b58 (taxeditor): Fix possible NPE
- 11:49 AM bug #8368 (Closed): problems in compose_cdm_specimen_or_observation_tree_entry()
- error message suppressed and visible effect of the problem solved, the further discussion and post release review tas...
- 11:47 AM bug #8370 (Closed): feature blocks created by compose_description_element_individuals_association() are broken
- problem solved discussion and post release review task copied to #8379
- 11:47 AM feature request #8135 (New): Implement verbatim type information in TaxEditor
- temporary disabled textual type designation and moved to 5.9 milestone where the necessary model changes will be impl...
- 11:46 AM Revision d7f33c8d (taxeditor): ref #8135 temporary disabled textual type designation
- 11:46 AM task #8379 (Closed): Review strange specimen implementations
- Please
* #8368
* #8370
I am repeating according comments from the original tickets here:
----
# #8370
... - 10:59 AM Revision a63beab2 (taxeditor): ref #8129 Handle all exceptions
- 10:44 AM Revision 79959591 (cdmlib): ref #8281 and E+M import (additional attributes in TeamOrPersonBase, Reference and TaxonNode)
- 10:44 AM Revision 07ab7ef0 (cdmlib): ref #5448 adapt parser to recognize old ranks like proles
- 10:35 AM Revision 663f4308 (taxeditor): ref #8129 Fix potential NPE
- 10:19 AM feature request #8378 (New): Show placeholder for asynchronously loaded images in details view
- 10:03 AM Revision 45272f9d (taxeditor): ref #8129 minor refactoring
- 10:01 AM Revision 1ce04105 (taxeditor): ref #8129 Load images asynchronously in advanced media view
- 08:44 AM bug #8377 (Closed): TypeDesignationsEditors: Delete must not be allowe before the workingset is saved
- this affects both:
* NameTypeDesignationEditor
* SpecimenTypeDesignationWorkingsetEditor
Im RegistrationWorkli... - 08:39 AM bug #8376 (Closed): RegistrationWorkingsetEditor: prevent clicking any futher buttons after the openting of a popup editor has been triggered
- 08:10 AM bug #7845 (Closed): NamePopupEditor new Genus button should clear the genus name field in the new editor
- 08:08 AM feature request #8284 (Closed): starting a registration for an existing name causes the name editor to pop up in read only mode
- 07:49 AM feature request #7966 (Closed): Registration search simplify type select options
- 07:48 AM feature request #8306 (Closed): Registration page links to registered taxon name
07/16/2019
- 07:58 PM feature request #8339: Completely remove the potentially redundant 'acceptedFor' parameter from synonym page
- OK, now I at least understand what it is used for. However, I doubt (but am not sure) that this is still needed. Mayb...
- 06:57 PM feature request #8306: Registration page links to registered taxon name
- fine, ticket can be closed.
- 06:54 PM feature request #7966: Registration search simplify type select options
- Lectotype gives back: Specimen types AND Name types of genera, species and below = correct
Problem fully resolved.... - 06:45 PM feature request #7966: Registration search simplify type select options
- Original designation gives back: Name types of genera = correct
Holotype gives back: Specimen types of species and b... - 06:29 PM task #8209: use ellypsed references for all reference comboboxes
- Again there are extremely long entries. The breadth of the dropdown box differs extremly.
 - 06:18 PM bug #8365: DerivedUnitFacadeCacheStrategy should remove collection codes from accession numbers
- Quote
"OK, parentheses are removed again."
The brackets are reinstated not removed but should be removed, see S... - 12:08 PM bug #8365 (Resolved): DerivedUnitFacadeCacheStrategy should remove collection codes from accession numbers
- OK, parentheses are removed again.
- 06:11 PM feature request #8284: starting a registration for an existing name causes the name editor to pop up in read only mode
- Info for Genera without reference:
The chosen name needs to be completed before it can be used. Please add the nome... - 06:09 PM bug #7187 (Closed): ReferenceEditor: saving with DOI casues exception
- 05:46 PM bug #7187: ReferenceEditor: saving with DOI casues exception
- Review fehlte. Feature seit Monaten ohne Beanstandung im Routinebetrieb der Release Version. Ticket kann geschlossen ...
- 06:00 PM bug #7845: NamePopupEditor new Genus button should clear the genus name field in the new editor
- new error: #8374
- 05:56 PM bug #7845: NamePopupEditor new Genus button should clear the genus name field in the new editor
- Ticket can be closed, but "Save" error when an uninominal should be saved.
- 06:00 PM bug #8374 (Duplicate): Save genus generated for a species with a different reference
- Test system:
New species entered. Genus not in list.
Input "new" genus with reference entered. Saving result in a... - 05:56 PM bug #7885 (Worksforme): registration search by name finds also typifications for this name
- this is now obviously working:
http://test.e-taxonomy.eu/dataportal/preview/phycobank/cdm_dataportal/registration-... - 05:51 PM feature request #8294 (Feedback): Make display of ID in source and ID Namespace configurable
- Patrick, can you try to fix the open issues?
- 05:47 PM feature request #8294: Make display of ID in source and ID Namespace configurable
- yes, it is switched and also in both views it is called "ID in Namespace" but should be "ID Namespace". Also ID Names...
- 05:38 PM feature request #6709 (Closed): Do not show UUID on media page
And now to your last question:
> By the way, why have we removed the possibility to show multiple representation...- 05:35 PM feature request #6709: Do not show UUID on media page
- Andreas Müller wrote:
> By the way, is there a reason why we show the file name below image? Sometimes it is very ug... - 05:30 PM feature request #6709: Do not show UUID on media page
- Andreas Müller wrote:
> Andreas Kohlbecker wrote:
> > e.g.: http://int.e-taxonomy.eu/dataportal/integration/referen... - 02:41 PM feature request #6709 (Feedback): Do not show UUID on media page
- Feel free to create new tickets from the above questions.
- 02:41 PM feature request #6709: Do not show UUID on media page
- Connected with the representation is the question which filename to use different representations have different file...
- 02:39 PM feature request #6709: Do not show UUID on media page
- By the way, why have we removed the possibility to show multiple representations on the media page? It would be nice ...
- 02:35 PM feature request #6709: Do not show UUID on media page
- By the way, is there a reason why we show the file name below image? Sometimes it is very ugly like in the above ment...
- 02:14 PM feature request #6709: Do not show UUID on media page
- Andreas Kohlbecker wrote:
> e.g.: http://int.e-taxonomy.eu/dataportal/integration/reference/cdm_dataportal/media/d0b... - 05:34 PM feature request #8373 (New): media page: avoid showing ugly file names as title replacement
By the way, is there a reason why we show the file name below image? Sometimes it is very ugly like in the above me...- 05:29 PM feature request #8372 (New): media page: show media type in the page title
- distinguish the different media types an to adapt the title accordingly: Instead of "Media ...", "Image ...", "Video ...
- 05:23 PM bug #8340 (Feedback): is accepted for Footnotes missing and with wrong index
- 05:23 PM bug #8340: is accepted for Footnotes missing and with wrong index
- Andreas Müller wrote:
> I do not really understand the problem. On http://test.e-taxonomy.eu/dataportal/preview/cich... - 02:07 PM bug #8340: is accepted for Footnotes missing and with wrong index
- I do not really understand the problem. On http://test.e-taxonomy.eu/dataportal/preview/cichorieae/cdm_dataportal/tax...
- 05:22 PM bug #8260 (Feedback): Details and Supplemental Data View do not save the expansion state of sections
- Now, nomenclatural reference is never expanded. Maybe it was like this before already and I simply did not recognize.
- 05:15 PM feature request #8283 (Feedback): Allow adding media to terms in taxeditor
- Patrick Plitzner wrote:
> Andreas Müller wrote:
> > The data may got lost the following way.
> >
> > * Open term... - 05:13 PM feature request #6316 (Closed): display source references of media objects in media page
- using ; as separator for multiple sources: commit:cdm-dataportal|c021779a
- 02:55 PM feature request #6316 (Feedback): display source references of media objects in media page
- Generally this works. Only we should replace "," by ";" as separator for multiple sources. The former is often part o...
- 05:07 PM Revision c021779a (cdm-dataportal): ref #6316 using ; as separator for multiple sources
- 05:03 PM feature request #8245: Improve representation of DescriptionElementBase.timeperiod
- here it is: http://int.e-taxonomy.eu/dataportal/integration/reference/cdm_dataportal/taxon/c246856f-c03e-4cb7-ac92-d9...
- 02:59 PM feature request #8245: Improve representation of DescriptionElementBase.timeperiod
- Andreas Kohlbecker wrote:
> done, for testing you can use for example http://edit.test/d7/reference_int/cdm_dataport... - 05:02 PM bug #8371 (New): When creating a new term for a vocabulary the term should have the focus afterwards
- ... maybe even better, the focus should go to the details view label field to allow immediately enter the label for t...
- 05:02 PM bug #8343: potential timezone problem in application stack
- Andreas Müller wrote:
> I don't understand why this is rejected. The problem still exists as you can see in the abov... - 04:47 PM bug #8343: potential timezone problem in application stack
- Andreas Müller wrote:
> Andreas Kohlbecker wrote:
> > Maybe this is an issue which comes from the time when the tim... - 03:18 PM bug #8343: potential timezone problem in application stack
- Andreas Kohlbecker wrote:
> Maybe this is an issue which comes from the time when the timezone data was not correctl... - 03:16 PM bug #8343 (Feedback): potential timezone problem in application stack
- I don't understand why this is rejected. The problem still exists as you can see in the above link. It might not be a...
- 04:47 PM bug #8129: Load images asynchronously in media details view
- Also we may want to have a replacement image which shows "loading" or something similar while the image is loading. A...
- 04:44 PM bug #8129 (Feedback): Load images asynchronously in media details view
- It seems to work only in the simple view but not in the advanced view.
As an example use rem_conf_am, bulk editor ... - 04:44 PM bug #8370: feature blocks created by compose_description_element_individuals_association() are broken
- Andreas Müller wrote:
> I think you accidentaly changed back to status "new"
thanx for fixing this Andreas.
@K... - 04:08 PM bug #8370 (Resolved): feature blocks created by compose_description_element_individuals_association() are broken
- I think you accidentaly changed back to status "new"
- 04:04 PM bug #8370 (New): feature blocks created by compose_description_element_individuals_association() are broken
- this bug has been introduced with commit:cdm-dataportal|e89c1115
- 04:03 PM bug #8370 (Resolved): feature blocks created by compose_description_element_individuals_association() are broken
- Applied in changeset commit:cdm-dataportal|43d01429e6dbd2d56970902ad525376f00b699b1.
- 04:00 PM bug #8370 (Closed): feature blocks created by compose_description_element_individuals_association() are broken
- For example Achnanthidium exiguum (Grunow) Czarn. in Algaterra shows multiple errors in the error box:
~~~
Warnin... - 04:09 PM Revision 0a59879e (cdm-dataportal): renaming confusing render array key from 'markup' to 'specimen_table'
- 04:03 PM Revision 43d01429 (cdm-dataportal): fix #8370 fixing bug introduced in e89c1115
- 03:20 PM feature request #8320 (Resolved): Links to reference page as appendend icon instead of having the whole citation as link
- 03:17 PM bug #8369 (Closed): SpecimenTypeDesignationDTO can not be serialized to JSON
- 02:19 PM bug #8369 (Closed): SpecimenTypeDesignationDTO can not be serialized to JSON
- SpecimenTypeDesignationDTO is missing getters and setters and thus can not be serialized
- 03:16 PM Revision c45d681a (cdmlib): ref #8369 SpecimenTypeDesignationDTO: adding missing getters and basing on TypedEntityReference
- 03:15 PM bug #8368 (Feedback): problems in compose_cdm_specimen_or_observation_tree_entry()
- Katja, please help disentangling the situation.
- 03:13 PM bug #8368: problems in compose_cdm_specimen_or_observation_tree_entry()
- After fixing the problems in this code i noticed that this code is not generating any output at all.
I attempted t... - 02:19 PM bug #8368: problems in compose_cdm_specimen_or_observation_tree_entry()
- working on this issue I found another issue: #8369
- 02:18 PM bug #8368 (In Progress): problems in compose_cdm_specimen_or_observation_tree_entry()
- 12:10 PM bug #8368 (Closed): problems in compose_cdm_specimen_or_observation_tree_entry()
- Hallo Katja,
ich leite das mal an dich weiter, denn es gibt hier ein Problem mit deinem Kode in compose_cdm_speci... - 03:14 PM Revision 6abd581c (cdm-dataportal): typo
- 03:14 PM Revision 0557d51a (cdm-dataportal): ref #8368 fixing check for exitance of property
- 03:14 PM task #8118: Update MySQL drivers
- Andreas Kohlbecker wrote:
> **The proper solution it the timezone problem is documented at MySqlFaq#The-server-time-... - 01:44 PM Revision aa6598d8 (cdm-dataportal): avoiding php warnings due to missing
- 01:36 PM Revision 13581ffc (cdmlib): ref #8365 removing parentheses from code + accession number - again, adapting test
- 01:32 PM Revision f2b0e412 (cdmlib): ignoring just the test() method in TaxonRelationshipsDTOTest
- 12:48 PM feature request #7791 (Closed): Visualize the phycobank higher taxon graph
- No improvements are needed by now
- 12:47 PM bug #8321 (Closed): Namepage shows wrong taxa as related to the name
- Wolf-Henning Kusber wrote:
> Both Eunotia krammeri with different Author teams are not mixed anymore. The described ... - 12:41 PM bug #8278 (Closed): LazyInitializationException (LIE) in ReferenceEllypsisCaptionGenerator
- closing, since this problem no longer occurred.
- 12:13 PM feature request #8366 (Closed): Same typedesignation display for registration page as in name page
- 12:09 PM feature request #8357 (Closed): implement client adapter for diatom base
- 12:07 PM Revision 12516e6b (cdmlib): ref #8365 removing parentheses from code + accession number - again
- 11:30 AM Revision 8f919bc0 (utis-core): attempt to create a 1.0 version of utis which is not causing a masssive startup delay - not usable yet
- 11:28 AM Revision c121ad4a (utis-webapp): using utis-core 1.2.1-SNAPHOT, but this combination is causing problems on the server
07/15/2019
- 04:30 PM bug #8233: [Follow up] Creating type duplicates
- Move to next milestone for 5.8 release
- 04:29 PM Revision 6f1e2526 (taxeditor): ref #8129 Fix refresh bug when adding a new empty media to a term
- 04:14 PM bug #8225: Deleting one of two type designations removes both
- Move to next milestone to implement a better solution than the temporary fix.
- 04:02 PM feature request #6849: [DISCUSS] How to handle "kind of" term creation in TermEditor
- Moving to next milestone for further discussion
- 03:58 PM feature request #8135 (Feedback): Implement verbatim type information in TaxEditor
- @Andreas: There was something Walter wanted but I can't remember what it was. Depending on that we may close this tic...
- 03:45 PM Revision f19b887f (utis-core): limiting GBIFBackboneClient to 1000 subchecklists
- 03:27 PM task #8130: Check if related feature data is cleared when supported facts type is changed
- Move to next milestone for remaining discussion
- 03:26 PM feature request #8044: Add "Move to..." menu to term editor
- Move to next milestone because this is still considered experimental
- 03:25 PM feature request #8248: Implement OWL import
- Move to next milestone because this is still considered experimental
- 03:24 PM feature request #6774: Implement OWL export
- Move to next milestone because this is still considered experimental
- 03:23 PM feature request #8335 (Resolved): Store character matrix table state as DB preference
- 03:22 PM feature request #8335: Store character matrix table state as DB preference
- Move to next milestone because the character matrix is still considered experimental
- 03:20 PM feature request #8242: Implement filtered combo boxes for state selection in CharacterMatrix
- Move to next milestone because this is still considered experimental
- 03:19 PM feature request #8294: Make display of ID in source and ID Namespace configurable
- Tested on nightly: The admin and local preferences work as expected BUT they seem to be swapped. Also the one prefere...
- 02:36 PM feature request #8283: Allow adding media to terms in taxeditor
- Added #8367 for remaining issues and discussion
All the rest should be implemented and functional now - 02:34 PM bug #8367 (New): Advanced media view is not available for media not edited in media details view
- Copied from #8283:
"With the current implementation it is not possible to switch between advanced and simple view bu... - 02:29 PM feature request #8286 (Closed): Add cm as unit term to CDM
- Testes and already used in additivity_ontology on test server.
- 02:22 PM feature request #8351 (Closed): name page: show type designations with map
- 02:12 PM Revision 556458d0 (utis-core): removing obsolte % from like match mode query
- 01:57 PM Revision 1461f4eb (utis-webapp): ref #8357 adding DiatomBaseClient to the index.html
- 01:55 PM task #8363 (In Progress): PESI SOAP service seems to return duplicate records
- I send an email to Bart ....
- 01:17 PM task #8363: PESI SOAP service seems to return duplicate records
- As the uuid seems to be the same I don't think we have data duplicates
- 01:16 PM task #8363: PESI SOAP service seems to return duplicate records
- If you are sure that this is not a data or data submission issue, I will delegate this problem to Bart Vanhoorn.
- 01:10 PM task #8363: PESI SOAP service seems to return duplicate records
- Why did you assign this to me. As it does not seem to be data issue but a service issue I can't see what I can do.
- 12:58 PM task #8363: PESI SOAP service seems to return duplicate records
- The search for "Crepis foetida%" (`http --timeout 600 https://cybertaxonomy.eu/eu-bon/utis/1.3/search 'providers==pes...
- 12:12 PM task #8363: PESI SOAP service seems to return duplicate records
- can you say which data is duplicated?
Does it appear as duplicate in the eu-nomen portal as well? - 01:25 PM Revision d1895dbe (utis-webapp): ref #8357 activating DiatomBaseClient in UTIS controller
- 01:24 PM Revision bed1d4af (utis-core): ref #8357 implementing DiatomBaseClient on base of the WoRMS client
- 12:38 PM Revision a2dbd247 (utis-core): bumping version to 1.2.3
- 11:25 AM feature request #6238: add name of sec reference to display of concept relations in portal and a little header
- Hi Gabi,
ich habe gerade dieses Ticket hier gefunden - ist erledigt.
Kannst du mal gucken ob das jetzt soweit O...
07/13/2019
- 06:11 PM feature request #8366: Same typedesignation display for registration page as in name page
- Image position and type positions are fine. The source interrupt the reading but is an important reference.
: ref #8366 adapting tests to full typedesignation display with map in registration page
- 08:34 PM Revision 6e686cc7 (cdmlib): Revert "ignoring TaxonRelationshipsDTOTest"
- This reverts commit 18b443282498e7bdbccadf14a861f6b474825297.
- 08:25 PM feature request #8366: Same typedesignation display for registration page as in name page
- Wolf-Henning Kusber wrote:
> No review, may be I was to fast:
> http://test.e-taxonomy.eu/dataportal/preview/phyco... - 07:29 PM feature request #8366: Same typedesignation display for registration page as in name page
- Name page okay: http://test.e-taxonomy.eu/dataportal/preview/phycobank/cdm_dataportal/name/8ad8bc6d-b413-4af1-8876-fb...
- 07:28 PM feature request #8366: Same typedesignation display for registration page as in name page
- No review, may be I was to fast:
http://test.e-taxonomy.eu/dataportal/preview/phycobank/cdm_dataportal/registration... - 05:11 PM feature request #8366: Same typedesignation display for registration page as in name page
- please review
- 05:10 PM feature request #8366 (Resolved): Same typedesignation display for registration page as in name page
- Applied in changeset commit:cdm-dataportal|41a348be0fd4782a984dd5f4e65069d7c7cb99f4.
- 03:42 PM feature request #8366 (Closed): Same typedesignation display for registration page as in name page
- The registration page should display the typedesignation in the same ways as in the name page.
A map should also be ... - 07:15 PM bug #8365: DerivedUnitFacadeCacheStrategy should remove collection codes from accession numbers
- Reviewing the screen shot:
First representation: Lectotype (reference) gathering(Code accession number)
Second repr... - 11:59 AM bug #8365 (Feedback): DerivedUnitFacadeCacheStrategy should remove collection codes from accession numbers
- I removed the parentheses but these now causes inconsistent display:
What do you think He... - 06:45 PM Revision 18b44328 (cdmlib): ignoring TaxonRelationshipsDTOTest
- 06:20 PM Revision deb2fc24 (cdm-dataportal): ref #8108 adding missing footnotes to name page
- 05:47 PM Revision b8a0efb3 (cdm-dataportal): grouping and doumenting ws calls
- 05:33 PM Revision 28702a86 (cdmlib): implemting TypeDesignationPortalController
- 05:32 PM Revision 35a38115 (cdmlib): ref #8365 putting parentheses back
- 05:26 PM Revision d8b10f90 (cdm-dataportal): ref #8366 fixing bug
- 05:23 PM Revision b9fcde0c (cdm-dataportal): ref #8366 adapting tests to full typedesignation display with map in registration page
- 05:10 PM Revision 41a348be (cdm-dataportal): fix #8366 full typedesignation display with map in registration page
- 04:00 PM Revision a9a04561 (cdm-dataportal): ref #8366 refactoring typedesignation and map functions
- 02:44 PM Revision 3000a28d (cdmlib): ref #8365 stripping collection code from accession number only if followed by whitespace
- 12:01 PM feature request #8357 (In Progress): implement client adapter for diatom base
- 12:01 PM feature request #8357: implement client adapter for diatom base
- Bart Vanhoorne wote:
diatombase.org (and all other subregisters in WoRMS/Aphia http://www.marinespecies.org/subre... - 07:29 AM Revision 7fa459c8 (cdmlib): ref #8283 Fix possible NPE when no media is attached to term
- 07:28 AM Revision 1ab658e8 (taxeditor): ref #8011, #8129 Fix possible NPEs when media URI can not be resolved
07/11/2019
- 06:50 PM Revision 78ddfbeb (taxeditor): ref #8011 Show term media
- 06:11 PM Revision a9b9edad (cdmlib): ref #8365 removing parentheses from code + accession number
- 06:04 PM bug #8365 (Resolved): DerivedUnitFacadeCacheStrategy should remove collection codes from accession numbers
- We should also consider removing the parentheses from the accession number since this seems to be useless in most sit...
- 06:00 PM bug #8365 (Closed): DerivedUnitFacadeCacheStrategy should remove collection codes from accession numbers
- Users frequently enter the collection code with the accession number which can cause to code to appear duplicated in ...
- 06:02 PM Revision f1248e50 (cdmlib): ref #8365 stripping collection code from accession number in DerivedUnitFacadeCacheStrategy
- 06:02 PM Revision 4aa385eb (cdmlib): avoiding NPE
- 05:30 PM Revision 4f7a5ec7 (cdm-dataportal): avoiding undefined property notice
- 04:41 PM bug #6151: implement pager for search service
- Email sent to Scott Chamberlain
- 04:28 PM bug #6151 (Resolved): implement pager for search service
- 04:24 PM bug #8364 (Closed): ext-links module: problems
- Hallo,
wo wir gerade vom Portal reden...
Ich habe mal den External links – sidebar getestet (bei den Cactaceae, O... - 03:29 PM Revision c7a4af2c (utis-webapp): doc on log file places
- 03:10 PM Revision 971fab73 (utis-webapp): impoving text on index.html
- 03:07 PM Revision 039b1a7b (utis-webapp): deleting obsolte GBIFBetaBackboneClient
- 03:06 PM Revision 286229be (utis-webapp): updating documentation on available checklists:
- - adding Phycobank
- adding default GBIF checklists - 03:05 PM Revision 1c6357ca (utis-core): deleting obsolte GBIFBetaBackboneClient
- 02:59 PM Revision c68ea3cc (utis-core): exteding and cleaning the default checklists for the GBIF client
- 02:52 PM Revision 62a27c8f (utis-core): deleting obsolte GBIFBetaBackboneClient
- 02:39 PM task #8363: PESI SOAP service seems to return duplicate records
- Hi Anderas, I added you to this ticket as watcher since this could be an issue wit the data delivery to VLIZ
- 02:36 PM task #8363 (Worksforme): PESI SOAP service seems to return duplicate records
- see
~~~
http --timeout 600 :8081/search 'providers==pesi' 'query==Crepis foetida' searchMode==scientificNameLike... - 02:35 PM Revision 2e351aa3 (utis-core): ref #6151 implementing pager in GBIF client and fixing problems with like search
- 02:33 PM feature request #6213 (Resolved): use separate tempfolder per store updater
- 02:23 PM bug #8129: Load images asynchronously in media details view
- > This also holds for the image gallery view if "show thumbnails" is switched on (but hopefully there only thumbnail ...
- 02:19 PM bug #8129 (Resolved): Load images asynchronously in media details view
- 02:18 PM Revision ccf1adbd (taxeditor): ref #8129 i18n
- 02:08 PM Revision 47c992a7 (taxeditor): ref #8129 Fix image disposing
- - refactoring
- 01:06 PM Revision c5ce9799 (utis-webapp): ref #8362 alowing to specify new unknown sub checklists
- 01:04 PM feature request #8362 (Closed): GBIFBackboneClient offers too vast amount of subchecklists
- 01:03 PM Revision a70f009c (utis-core): ref #8362 limiting detault set of gbif sub checklists and thus spedding up startup time
- - also implementing like search
- 12:48 PM Revision ca1b4808 (taxeditor): ref #8129 Load images asynchronously in media details view
- 08:09 AM Revision 8b2071a3 (cdmlib): ref #8283 Add media uuids to term dto
- - fix HQL response handling for left outer joins
- 08:07 AM Revision f3b620c8 (utis-core): store updater thread wirth minimus priority
07/10/2019
- 11:12 PM feature request #8362 (Closed): GBIFBackboneClient offers too vast amount of subchecklists
- The GBIFBackboneClient fetches all 45400 sub checklists. This makes the capabilities response extremely unusable and ...
- 10:10 PM Revision 0470eeac (utis-webapp): better log folder detection
- 10:09 PM Revision f92a98aa (utis-core): ref #6213 separate tempfolder per store updater - creating missing tmp folder
- 06:20 PM Revision c70386c0 (utis-core): ref #6213 separate tempfolder per store updater
- 06:20 PM Revision 84ee3f65 (utis-webapp): better logfile names
- 06:19 PM Revision a3528828 (utis-webapp): removing logfiles
- 06:19 PM Revision 2f86c850 (utis-webapp): removing logfiles
- 05:50 PM Revision 9d3d4e28 (utis-webapp): webapp context specific logfiles and logging of web requests
- 05:48 PM Revision 2f0b034a (utis-core): modernizing logging -> log4j2
- 03:08 PM Revision 1d603ffa (utis-webapp): reenabling RollingFile Logger (/var/log/jetty8/utis.log)
- 03:06 PM Revision 03b34296 (utis-core): ref #6151 paging of scientificNameLike and vernacularNameLike search modes in Phycobank client by basing on new common abstract cdm server client which is now also used for the BgbmEditClient
- 12:46 PM Revision 044553f6 (utis-core): ref #6151 paging of scientificNameLike and vernacularNameLike search modes in BgbmEditClient client
- 08:51 AM Revision 1a1fb1f0 (utis-core): ref #6151 paging of scientificNameLike and vernacularNameLike search modes in PLAZI client
- 08:44 AM Revision 54c8f6e1 (utis-core): ref #6151 paging of scientificNameLike and vernacularNameLike search modes in EUNIS client
07/09/2019
- 11:16 PM bug #6151: implement pager for search service
- the paging mechanism for the WoRMS and PESI clients is implemented.
The PESI SOAP service however seems to return ... - 11:13 PM Revision 6fd7dc60 (utis-core): ref #6151 paging of scientificNameLike and vernacularNameLike search modes in PESI client
- 10:48 PM feature request #8360 (Worksforme): paging results of /classification/{taxonId}/children webservice
- The WoRMS and PESI webservices only return the first 50 taxa. It is needed to use the offset parameter to obtain all ...
- 10:44 PM Revision 8edd1056 (utis-core): ref #6151 paging of scientificNameLike and vernacularNameLike search modes in WoRMS client
- 05:31 PM Revision 236f847c (utis-webapp): ref #6151 pager parameters in UtisController - 2
- 05:30 PM Revision 11ca8ad3 (utis-core): ref #6151 pager parameters TnrMsg
- 05:24 PM Revision a6d66952 (utis-webapp): ref #6151 pager parameters in UtisController
- 05:03 PM Revision e34c2dfb (utis-core): ref #6151 updating PESIClient to latest SOAP api
- 04:37 PM task #8359 (Closed): Update WoRMS client adapter
- 01:56 PM task #8359 (Resolved): Update WoRMS client adapter
- Applied in changeset commit:utis-core|f9e3e79e7fd8009ed3c8353d032b028086321f34.
- 01:52 PM task #8359 (Closed): Update WoRMS client adapter
- The SOAP API of Aphia has changed
- 04:31 PM Revision 26759d99 (utis-core): ref #8357 initial steps in implementing DiatomBase as subServiceProvider in the WoRMS client
- 01:52 PM Revision f9e3e79e (utis-core): fix #8359 updating the WoRMS client adapter and fixing a couple of problems
- 12:07 PM Revision 2b66b2b7 (utis-core): better loggin in Neo4jStoreUpdater
- 12:07 PM Revision 1a5bb017 (utis-core): better loggin in GBIFBackboneClient
- 12:00 PM feature request #8357: implement client adapter for diatom base
- Diatom base is fully integrated into WoRMS served throgh the same system.
The search form for DiatomBase uses in t... - 11:42 AM Revision 8bf3f34e (utis-webapp): fixing excludedClients startup option
- 11:22 AM feature request #8356 (In Progress): Algae Names Index - implementation
- 11:12 AM feature request #8358 (Duplicate): Show name type only if rank is higher than species
- 10:44 AM feature request #8358: Show name type only if rank is higher than species
- this seems like duplicate of #7690
- 10:39 AM feature request #8358 (Duplicate): Show name type only if rank is higher than species
- Show name type only if rank is higher than species in Vaadin.
This might enhance usability of the type section for... - 09:18 AM Revision ccf7d82c (utis-webapp): introducing dev mode system properties and documentation
- 09:17 AM Revision 48c3d118 (utis-core): renaming dev mode system property 'skipStoreUpdating'
- 09:16 AM Revision df93a7b0 (utis-core): ref #8355 switching PhycobanlClient to production server
- 08:56 AM feature request #8355 (Resolved): implement client adapter for phycobank
- Applied in changeset commit:utis-core|ad30a5f15e02eab30f50c2f9c598860ab822d6d5.
- 08:55 AM Revision ad30a5f1 (utis-core): fix #8355 implementing phycobank client adapter
07/08/2019
- 03:45 PM feature request #8357 (Closed): implement client adapter for diatom base
- example requests:
~~~
http --timeout 600 :8081/search 'providers==worms[diatombase]' 'query==Eunotia can' searchM... - 03:42 PM feature request #8356 (In Progress): Algae Names Index - implementation
- In contrast to the original concept considerations for an index (#6184), we have chosen a more straight forward solut...
- 03:34 PM feature request #8355 (Closed): implement client adapter for phycobank
- example requests:
* http :8081/search providers==bgbm-phycobank\[phycobank\] 'query==Navicula*' searchMode==scient... - 03:14 PM Revision b0cdc514 (cdm-dataportal): initializing variable
- 03:05 PM Revision 40360e37 (cdm-dataportal): adapting tests to modified portal code
- 02:10 PM Revision 25201777 (cdm-dataportal): ref #8320 fixing buggy implementation of icon links to references in theme function
- 02:08 PM Revision 5f188298 (cdm-dataportal): ref #6380 proper de-duplication of type designations
- 01:00 PM feature request #8352 (Closed): name page: show nomenclatorical acts
- Yes, closed now.
- 12:05 PM feature request #8352: name page: show nomenclatorical acts
- So we can close this ticket?
- 12:55 PM feature request #8351: name page: show type designations with map
- The map is now being suppressed if there are no points to show,
- 12:53 PM Revision 25f440dc (cdm-dataportal): ref #8351 supressing specimen map in case of no location points
- 12:04 PM feature request #8354 (Closed): taxonomic registration search by name finds also typifications for this name
- 11:17 AM feature request #8354: taxonomic registration search by name finds also typifications for this name
- Name types for genera can be found by entering the name (fake entry for "Phacus"). Ticket might be closed (but see Pl...
- 11:02 AM task #8201: test all delete functionality in the RegistrationUI
- Wolf-Henning Kusber wrote:
> Article not linked to any registration can be deleted without problem.
... but is no... - 10:50 AM task #8201: test all delete functionality in the RegistrationUI
- Delete button is available for references with registrations. Trying to delete (which realy does not any sense) produ...
- 10:43 AM task #8201: test all delete functionality in the RegistrationUI
- Article not linked to any registration can be deleted without problem.
- 10:36 AM task #8201: test all delete functionality in the RegistrationUI
- Saved specimen type in Registration (preparation): full functionality.
Saved name specimen type in Registration (pre...
07/05/2019
- 11:04 PM Revision f9e8f532 (cdmlib): minor in cdm light export
- 10:14 PM Revision c0babef0 (cdmlib): revert condensed distribution string and some performance issues in cdm light
- 08:19 PM feature request #8352: name page: show nomenclatorical acts
- Example for checking (including data cleaning issues to be solved by whk):
Achnanthes austriaca
name is not regis... - 12:00 AM feature request #8352: name page: show nomenclatorical acts
- please review
- 07:58 PM feature request #8354: taxonomic registration search by name finds also typifications for this name
- Lectotypes/Epitypes of names are found by th name. Issue solved.
For name types of rank=genus and higher no data a... - 12:02 AM feature request #8354 (Resolved): taxonomic registration search by name finds also typifications for this name
- done. please review
- 07:33 PM feature request #8351: name page: show type designations with map
- Sorry, an issue for georeferences not entered. Please see:
Eunotia tauntoniensis Hust. Type: United States of Americ... - 11:57 AM feature request #8351: name page: show type designations with map
- Works fine, ticket can be closed.
- 12:02 AM feature request #8351: name page: show type designations with map
- please review
- 02:08 PM Revision 0a7237ca (cdmlib): add condensed distribution string to cdm light export
- 02:06 PM Revision a0e2b61c (cdmlib): Merge branch 'develop' of ssh://dev.e-taxonomy.eu/var/git/cdmlib into develop
- 02:05 PM Revision 068072a1 (cdmlib): smaller changes in abcd import
- 11:09 AM Revision d1efd1c1 (cdmlib): ref #8248, #6774 Add top level term evaluation to test
- 09:15 AM Revision f61ab127 (cdmlib): fix dummy line in cdmlight export simple facts table
- 12:24 AM Revision d1b223ad (cdmlib): addinional RegistrationService test and a bit of cleaning up
07/04/2019
- 10:40 PM Revision 0fb7c9e1 (cdmlib): ref #8352 controller and service to find registrations by name
- 10:40 PM Revision 54e11d53 (cdmlib): ref #8354 implenting registration serch by taxonUUIDs which also covers typedesignations
- 10:40 PM Revision 5c530881 (cdmlib): RestrictionConverter converts uuid strings to UUID objetcs which have beed passed as json value
- 10:40 PM Revision 60ef4839 (cdmlib): cleaning up controller code
- 10:39 PM feature request #8352 (Resolved): name page: show nomenclatorical acts
- Applied in changeset commit:cdm-dataportal|efff6ee1db489abd192b1193e652f25978fc2441.
- 07:06 PM feature request #8352 (Closed): name page: show nomenclatorical acts
- show Registrations on the name page
- 10:39 PM feature request #8351 (Resolved): name page: show type designations with map
- Applied in changeset commit:cdm-dataportal|14076b88ce598053035a48076f0a8f0af5c99cd3.
- 06:59 PM feature request #8351 (Closed): name page: show type designations with map
- show the name type and specimen type designations on the name page. In case the type specimens are having location da...
- 10:38 PM Revision efff6ee1 (cdm-dataportal): fix #8352 name page showing registrations
- 09:17 PM feature request #8354 (Closed): taxonomic registration search by name finds also typifications for this name
- The search for Registrations via the classification graph misses finding registrations with are only associated with ...
- 07:18 PM bug #8353 (New): nomenclatural and bibliographic in-reference displayed
- The nomenclatural author team is suplemented by the bibliographical author team, this is misleading.
Example: http... - 07:01 PM Revision 14076b88 (cdm-dataportal): fix #8351 showing type designations and map in name page
- 06:20 PM Revision 94a882ee (cdm-dataportal): ref #6380 fixing regression
- 05:40 PM Revision 84673358 (cdmlib): ref #8248, #6774 Adapt tests
- 05:39 PM Revision 016e854b (cdmlib): ref #6774 Export reference uuid
- 03:18 PM feature request #8256 (In Progress): Show all status preferences as table
- there is a table of all area specific status preferences on the admin distribution preference page. It is possible to...
- 03:14 PM Revision 198c9340 (taxeditor): ref #8256: add table of all status preferences in preference page
- 02:18 PM Revision d4e4df3f (cdmlib): ref #8248 Check for existing media and references
- 02:11 PM bug #6380: typedesignations missing in homotypic group
- please review, e.g. at the example of http://test.e-taxonomy.eu/dataportal/preview/cichorieae/cdm_dataportal/taxon/a6...
- 02:09 PM bug #6380 (Resolved): typedesignations missing in homotypic group
- Applied in changeset commit:cdm-dataportal|b059b449f976cd7e198a3e21c05e38fb038ba1eb.
- 02:09 PM Revision b059b449 (cdm-dataportal): fix #6380 collecting all type designations of the whole synonymy group
- 01:43 PM Revision 98dab2ca (taxeditor): Merge branch 'hotfix/5.7.4'
- 01:29 PM Revision 4059e0ea (cdmlib): ref #8248, #6774 Fix order of term import
- - add top level term property to import/export
- 01:29 PM Revision 81198ab4 (cdmlib): ref #8248 Fix possible NPE
- 01:29 PM Revision 71e60ad9 (cdmlib): ref #6774 Move recursive model export to util class
- 01:27 PM Revision a63ffc14 (cdmlib): adding AnnotationType to getEmptyDefinedTermBase()
- 01:17 PM bug #8349 (Closed): NPE in ParseHandler when parsing name without nomencl reference
- Tested local hotfix branch. Created a new taxon and, in the name editor, added and edited misapplications and synonym...
- 11:55 AM bug #8349 (Resolved): NPE in ParseHandler when parsing name without nomencl reference
- please review, we need an hotfix because this error is always thrown if someone wants to create a new name without th...
- 11:51 AM bug #8349 (Closed): NPE in ParseHandler when parsing name without nomencl reference
- when parsing name without nomenclatural reference the following NPE is thrown:
~~~ text
Caused by: java.lang.Null... - 12:23 PM feature request #8283 (Resolved): Allow adding media to terms in taxeditor
- this seems to work now. (the details view is still empty when changing to referencing objects view, but adding the me...
- 12:06 PM Revision 76c739e8 (taxeditor): fix NPE in ParseHandler
- 12:01 PM bug #8347 (Closed): point map zooms to wrong area when using sphericalMercator maps like OpenTopo OSM etc.
- 09:50 AM bug #8347: point map zooms to wrong area when using sphericalMercator maps like OpenTopo OSM etc.
- The isohypse is very helpfull.
Just a minor issue remaining, when trying to zoom into Berlin this is easy and fast... - 12:01 PM feature request #8350 (Closed): Search dialog for named areas should work with abbreviations
- The search dialog for named areas should be configurable whether the seach should be over the label, or one of the ab...
- 11:48 AM Revision 9ce386b8 (taxeditor): fix NPE in ParseHandler
- 11:34 AM feature request #8346 (Closed): Curators and admins can edit arbitrary Annotations (Notes)
- Selecting no term type is ok. These annotations are handled as untyped.
The new termtype 'Public Note' needs to be... - 09:59 AM feature request #8346: Curators and admins can edit arbitrary Annotations (Notes)
- Fields are implemented. Additional field can be added.
Question: should we take one entry as default (e.g. edition... - 10:54 AM feature request #7620 (Closed): RegistrationSearch implemented with Reference filter
- 09:33 AM feature request #7620: RegistrationSearch implemented with Reference filter
- Perfectly solved! This enhances the usabiliy of PhycoBank significantly.
Search functionality is available for
st...
07/03/2019
- 06:32 PM Revision b654a866 (cdm-dataportal): centralizing ckeck for Java-script developer mode
- 06:19 PM bug #8347: point map zooms to wrong area when using sphericalMercator maps like OpenTopo OSM etc.
- nicely done:
our example with NZ and DE: Planothidium victori:
http://test.e-taxonomy.eu/dataportal/preview/phyco... - 06:05 PM bug #8347: point map zooms to wrong area when using sphericalMercator maps like OpenTopo OSM etc.
- issue solved, please review
- 04:02 PM bug #8347 (Resolved): point map zooms to wrong area when using sphericalMercator maps like OpenTopo OSM etc.
- Applied in changeset commit:cdm-dataportal|95aba8b561b3695d047b50a25a24fc41f1f83b32.
- 04:00 PM bug #8347 (Closed): point map zooms to wrong area when using sphericalMercator maps like OpenTopo OSM etc.
- example:
* https://www.phycobank.org/cdm_dataportal/taxon/6e0895b4-64ee-4b1a-ba87-403ee7888f94
* http://test.e-t... - 05:59 PM Revision d30b89de (cdm-dataportal): replacing fixed background color yellow by class attribute 'row-active'
- 04:47 PM feature request #7620: RegistrationSearch implemented with Reference filter
- see above. The filter is not working.
With the given search strings all published registrations from new to old are ... - 12:57 PM feature request #7620: RegistrationSearch implemented with Reference filter
- The test server was not up to date. The problem which was causing this is fixed now. Please test again.
- 09:44 AM feature request #7620: RegistrationSearch implemented with Reference filter
- Field "Publication" available,
search functionality not given.
"Baikal" gives back Baikal-Taxa + African etc. taxa
... - 04:31 PM bug #8337: internal error, name type status missing, reference in name type not updated
- The duplicate type (first one) cannot be deleted in Vaadin, because it is not possible to open the record and to get ...
- 03:16 PM bug #8337 (Worksforme): internal error, name type status missing, reference in name type not updated
- This problem can not be reproduced on the test system. The duplicate name type designations can be removed by deletin...
- 04:28 PM Revision 9f567421 (taxeditor): Updated version in pom / project files to taxeditor version : 5.7.4 and cdmlib version : 5.7.0
- 04:02 PM Revision 40308723 (cdm-dataportal): avoiding php warning due to uninitialized variable
- 04:01 PM Revision 95aba8b5 (cdm-dataportal): fix #8347 fixing wrong projection transformation for data maps
- 02:16 PM Revision 738771f2 (cdm-dataportal): wrapping 'no associated taxon' message in div to allow styling
- 02:15 PM Revision 7ff3b0ef (cdm-dataportal): wrapping 'no associated taxon' message in div to allow styling
- 12:49 PM Revision 6403c1de (cdmlib): code cleaning
- 11:11 AM Revision 49d17d7d (cdm-webapp): jenkins bumping cdmlib.version and cdm.vaadin.version to 5.9.0-SNAPSHOT
- 10:27 AM Revision 600fbce8 (cdm-webapp): changing wp5.e-taxonomy.eu/mavenrepo to cybertaxonomy.eu/mavenrepo
07/02/2019
- 06:18 PM feature request #8346: Curators and admins can edit arbitrary Annotations (Notes)
- please review
(the solution is not a beauty but it is working!) - 06:17 PM feature request #8346 (Resolved): Curators and admins can edit arbitrary Annotations (Notes)
- Applied in changeset commit:cdm-vaadin|c02fc11ae73482b118a48cfb4fca97e7302bda1f.
- 05:58 PM feature request #8346 (Closed): Curators and admins can edit arbitrary Annotations (Notes)
- The FilterableAnnotationsField should offer the option to edit arbitrary notes (annotations) in all views where it is...
- 06:17 PM Revision c02fc11a (cdm-vaadin): fix #8346 flexible editing of annotations for Curator and Admin roles
- 04:51 PM Revision 1cdc1f46 (cdmlib): using CleanSweepInsertLoadStrategy in SecurityTest
- 04:42 PM Revision 1c2aeca4 (cdmlib): adding missing REGISTRATION* tables to the ClearDBDataSet.xml
- 04:17 PM Revision 5f71008d (cdmlib): using CleanSweepInsertLoadStrategy in DerivedUnitConverterIntegrationTest
- 04:14 PM feature request #7620: RegistrationSearch implemented with Reference filter
- ready for review
- 04:14 PM Revision c5089cec (cdm-dataportal): ref #7620 reference filter options for the Registration search
- 04:08 PM Revision 824ae003 (cdm-dataportal): ref #8320 fixing tab color specificity probelm
- 03:19 PM Revision 88131480 (cdm-dataportal): ref #8287 re-enabling type status filter multiple options
- 03:18 PM Revision bb5a542c (cdm-dataportal): typo
- 03:15 PM feature request #7621 (Closed): registration search also covers typified names
- fully solved
- 03:14 PM feature request #8330 (Closed): RegistrationDao search method
- fully solved
- 03:11 PM bug #8287: RegistrationServiceImpl.page( .... Collection<UUID> typeDesignationStatusUuids ... ) fails when NULL and UUIDs are passed
- please review
- 03:10 PM bug #8287 (Resolved): RegistrationServiceImpl.page( .... Collection<UUID> typeDesignationStatusUuids ... ) fails when NULL and UUIDs are passed
- Applied in changeset commit:cdmlib|c40f420c355ee29b3b31e575c8d630f59cf55c0e.
- 03:10 PM Revision c40f420c (cdmlib): fix #8287 implementing support for null type status as filter value in Registration service
- 02:31 PM Revision f54d835b (cdmlib): Revert "adding missing MatchMode in createRestriction()"
- This reverts commit 1eca13fafa584494a9300c1a6844d435ca5ae897.
- 02:07 PM Revision c1f34da9 (cdmlib): ref #8248 Add character to export (partially)
- 01:44 PM feature request #8345 (Closed): RegistrationListView: filter option for publication
- 01:42 PM feature request #8345 (Resolved): RegistrationListView: filter option for publication
- Applied in changeset commit:cdm-vaadin|c609114c696fe3512d2c485b9d4e6a1a52dafac9.
- 01:41 PM feature request #8345 (Closed): RegistrationListView: filter option for publication
- extend the existing filters by a text field for publication citation patterns
- 01:43 PM bug #7885 (In Progress): registration search by name finds also typifications for this name
- 01:43 PM bug #7885 (Closed): registration search by name finds also typifications for this name
- 12:59 PM bug #7885 (In Progress): registration search by name finds also typifications for this name
- 01:42 PM Revision c609114c (cdm-vaadin): fix #8345 adding filter text field for publications in RegistrationListView
- 01:37 PM Revision 44787444 (cdmlib): ignoring RedmineRegistrationMessageServiceTest since RedmineRegistrationMessageService is going to be removed
- 01:34 PM Revision 1eca13fa (cdmlib): adding missing MatchMode in createRestriction()
- 01:05 PM bug #8327 (Duplicate): record with publication date is competing with curation status, set to preparation or curation
- closing as duplicate
- 11:48 AM Revision ff454f55 (cdm-dataportal): ref #8182: use bgbm-import instead of ip address
- 11:18 AM feature request #8342: shift field Field number
- This is potentially easy to fix, thus i am setting this to HIGHEST. If it is more time consuming we should downgrade ...
- 11:01 AM Revision f60b52c4 (cdm-dataportal): ref #8182: Dna should be DNA
- 10:41 AM Revision c7637ad4 (cdmlib): fix failing test (add anywher to createRestrictions)
07/01/2019
- 06:52 PM Revision f69d6df9 (cdmlib): ref #8330 removing unused and obsolete service methods which are replaces by the new one
- 06:35 PM Revision 69fd8336 (cdmlib): ref #7620 rest service /registrationDTO/find with filter string for references
- 06:32 PM Revision 58cbdc8e (cdmlib): ref #7620 filtered registration search implemented with filter string for references
- 05:07 PM Revision fbe02574 (cdmlib): ref #8330 ref #7885 removing confusing typo in test data
- 04:31 PM Revision bae3fd55 (cdmlib): ref #7885 tests for registration search by typified name and implementing order by
- 03:28 PM Revision 9ccf877c (cdmlib): ref #8330 dao method for filtered registration search implemented: reprocduces existing functionality plus extended name search ref #7885
- 02:45 PM feature request #6709 (Closed): Do not show UUID on media page
- Andreas Kohlbecker wrote:
> e.g.: http://int.e-taxonomy.eu/dataportal/integration/reference/cdm_dataportal/media/d0b... - 02:42 PM feature request #6709: Do not show UUID on media page
- e.g.: http://int.e-taxonomy.eu/dataportal/integration/reference/cdm_dataportal/media/d0bf650c-4cc6-4dfe-bb2f-a289b426...
- 10:45 AM feature request #6709 (Feedback): Do not show UUID on media page
- Andreas Kohlbecker wrote:
> HI Patrick, is this issue about the UUID being used as replacement for missing title att... - 01:51 PM Revision c2447263 (cdmlib): ref #8330 completing documentation regarding wildcards and fixing bug with MatchMode LIKE when using Restrictions
- 01:51 PM Revision 84cd43e7 (cdmlib): ref #8330 documentation for RegistrationService.page and RegistrationWorkingsetService.pageDTO
- 01:51 PM Revision d0bdcc3f (cdmlib): ref #8330 implementing tests for RegsitrationService.page and RegistrationWorkingsetService.pageDTO
- 01:43 PM Revision caa17126 (cdmlib): ref #8344: add dummy line in empty simple facts table
- 01:42 PM feature request #8344 (Closed): Cdm light export: add dummy line in simple facts table
- Hallo Katja,
...
Dann etwas für den Release, wenn’s geht:
Ich verwende die SimpleFact Tabelle im weiteren Verlauf ... - 01:41 PM feature request #8294 (Resolved): Make display of ID in source and ID Namespace configurable
- please review
06/28/2019
- 02:05 PM feature request #8320 (Closed): Links to reference page as appendend icon instead of having the whole citation as link
- done
- 02:04 PM feature request #8320 (Resolved): Links to reference page as appendend icon instead of having the whole citation as link
- Applied in changeset commit:cdm-dataportal|2ffe4d59b3a9ac3747f0b94a761adf3ea0f6de59.
- 02:04 PM Revision 2ffe4d59 (cdm-dataportal): fix #8320 links to references as appended icon & custom icon font set
- - theme method extended by second doIconLink attribute
- all usages of the theme methods with icon link except for r... - 01:17 PM feature request #7620 (Resolved): RegistrationSearch implemented with Reference filter
- Applied in changeset commit:cdm-dataportal|384ff2ba6f98d8d869093ff4be0fea7eb81d7a0e.
- 01:16 PM Revision 384ff2ba (cdm-dataportal): fix #7620 links to references as appended icon link & new custom icon fontset
- - theme method extended by second doIconLink attribute
- all usages of the theme methods with icon link except for r... - 01:05 PM Revision f45c46ef (cdm-dataportal): updating information on compass version
- 11:47 AM Revision a4f3f99c (taxeditor): ref #8294: add preference page for id in namespace and namespace in source
06/27/2019
- 07:13 PM bug #8343 (Rejected): potential timezone problem in application stack
- I don't think that we are having a timezone shift problem since the date is stored in the db as 2018-06-11 22:00:00. ...
- 07:07 PM bug #8343 (Closed): potential timezone problem in application stack
- Ist denn genau definiert, um welche Zeitzone es sich handelt? Ich frage auch weil auf https://www.phycobank.org/cdm_d...
- 07:12 PM task #8118: Update MySQL drivers
- **The proper solution it the timezone problem is documented at MySqlFaq#The-server-time-zone-value-is-unrecognized**
- 07:03 PM feature request #8245 (Resolved): Improve representation of DescriptionElementBase.timeperiod
- done, for testing you can use for example http://edit.test/d7/reference_int/cdm_dataportal/taxon/c246856f-c03e-4cb7-a...
- 05:27 PM task #7269 (Closed): Use redmine as message hub for submitter curator communication
- even if it has been completely implemented this feature has been rejected afterwards
- 05:26 PM task #7269 (Rejected): Use redmine as message hub for submitter curator communication
- 05:21 PM Revision ef6a4ce9 (cdm-dataportal): ref #8245 stripping trailing zeros in description element time priods, with test
- 05:19 PM Revision ee5d420b (cdm-dataportal): ref #4372 page elements DupalBlock and FeatureBlock compatible also with zen theme - solving problems
- 05:00 PM feature request #4372 (In Progress): Selenium PortalPage class also suitable for zen-basetheme
- 04:59 PM Revision 1b1c2bc9 (cdm-dataportal): ref #4372 page elementd DupalBlock and FeatureBlock compatible also with zen theme
- 02:26 PM task #7296 (Closed): externalize redmine api key
- all resources removed
- 02:26 PM Revision 8ec6c716 (cdmlib): ref #7296 removing all config files related to the RemineMessagingService since this has been dropped completely
- 02:26 PM Revision 76eaf322 (cdmlib): ref #8321 cleaning up cotroller code
- 02:23 PM Revision b74a2730 (taxeditor): ref #7920: fix delete of preferences
- 02:23 PM Revision 605d9128 (taxeditor): minor - avoid NPE
- 02:20 PM task #4177 (Resolved): display of name relationships in synonymy broken
- I detached the task #5856: "[DISCUSS] Consider implementing additional name relationships" from this issue so that we...
- 02:14 PM Revision 276ef31b (taxeditor): Merge branch 'develop' of ssh://dev.e-taxonomy.eu/var/git/taxeditor into develop
- 02:12 PM Revision ef8972ee (taxeditor): smaller changes for abcd imports in tax editor
- 02:11 PM Revision d9fabe96 (cdmlib): smaller changes in ABCD import - continue
- 02:10 PM Revision 5479041f (cdmlib): Merge branch 'develop' of ssh://dev.e-taxonomy.eu/var/git/cdmlib into develop
- 02:09 PM Revision f769c20b (cdmlib): smaller changes in ABCD import
- 10:34 AM feature request #7408 (Feedback): [E+M] Support for preferred common names in data portal
- Is this ticket still relevant. I seem to remember that the preferred common names are currently in discussion.
- 10:25 AM bug #8050 (Closed): Create blocking registrations for un-registered names which are to be used in nomenclatural acts
- Okay, da offene Punkt auch mit Workflows zu tun hat, sollten wir den kommende Woche diskutieren. Schließe wie besproc...
- 09:04 AM bug #8050 (Resolved): Create blocking registrations for un-registered names which are to be used in nomenclatural acts
- Wolf-Henning Kusber wrote:
> Das Problem in !#11 und !#12:
>
> Konkret möchte ich für einen existierenden Namen, ... - 09:08 AM Revision 430b5a6c (cdmlib): ref #8182: minor
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