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From 06/23/2019 to 07/22/2019

07/22/2019

03:23 PM bug #8395 (Closed): NullPointerException (NPE) in NameCatalogueController
This NPE problem currently breaks searching for "Planothidium" in phycobank via UTIS
~~~
Caused by: java.lang.Nu...
Andreas Kohlbecker
02:42 PM feature request #8180 (Feedback): Add property term "Presence/Absence" to CDM default terms
Patrick Plitzner
08:28 AM feature request #8390 (In Progress): implement /portal/name/{uuuid}/typeDesignationsInHomotypical...
Andreas Kohlbecker
07:48 AM bug #8340 (New): is accepted for Footnotes missing and with wrong index
I think there is nothing to do about this ticket as long #8339 is not decided by 100%. Andreas Kohlbecker

07/19/2019

04:38 PM bug #8340: is accepted for Footnotes missing and with wrong index
Don't know what kind of feedback is needed from my side? Andreas Müller
04:27 PM feature request #8134: Implement verbatim type information in dataportal
related to issues in 5.9 so maybe we can implement it then Andreas Müller
04:13 PM feature request #8354: taxonomic registration search by name finds also typifications for this name
correct! Andreas Kohlbecker
03:53 PM feature request #8354: taxonomic registration search by name finds also typifications for this name
to me seems to be a cdmlib ticket, not cdm Andreas Müller
04:12 PM task #7296: externalize redmine api key
it is! The changes have been made in `cdmlib-ext/src/test/resources/services-external.properties` Andreas Kohlbecker
03:55 PM task #7296: externalize redmine api key
this is not a cdm ticket, please change category if cdmlib is also not correct Andreas Müller
03:27 PM bug #6627 (Feedback): Remaining cdm light issues
should we close this ticket and create a new remaining (II) ticket with the now open issues.
Most of the tasks hav...
Andreas Müller
03:13 PM feature request #8273 (Feedback): abcd import: check for all specimen for DNA in DNABank
Is this already implemented? It has a commit. Andreas Müller
03:11 PM feature request #8322 (Feedback): add sortindex to cdm light export
Isn't this already implemented. Review? Andreas Müller
03:08 PM bug #8088 (Feedback): Open taxon node wizard issues
can we close this and create a new ticket with open issues? There are already several commits on this ticket.
Let me...
Andreas Müller
03:07 PM feature request #8182: show blast search result
is this ready or should we create ticket for open issues? Andreas Müller
03:04 PM feature request #8388 (Closed): UTIS search block
completed Andreas Kohlbecker
03:04 PM feature request #8344 (In Progress): cdm light export: add dummy line in simpla facts table
is this fixed already? Please move to 5.10 if not Andreas Müller
02:58 PM bug #8313: Multiple categorical data get deleted when clicked on in Character Matrix
Move back to 5.8 as this seems to be ready in 5.8 milestone Andreas Müller
02:19 PM report #8392 (New): Types in PhycoBank
In general, gathering and type and specimen information is displayed in different more or less standardised ways. See... Wolf-Henning Kusber
02:16 PM task #8391 (In Progress): Name page shows complete name information (II)
Andreas Müller
02:11 PM task #8391 (In Progress): Name page shows complete name information (II)
Continue #8108:
Remaining issues:

2. Inhaltlich sollten folgende Angaben zu sehen sein:
* ~~Taxa~~
...
Andreas Müller
02:13 PM feature request #8108 (Resolved): Name page shows complete name information (I)
copied remaining issues to new ticket to review and close this ticket for current milestone. Andreas Müller
01:43 PM bug #6523 (In Progress): Correct display of misspellings in synonymy
Andreas Müller
10:55 AM bug #6523: Correct display of misspellings in synonymy
@Walter: could you please check if Nepenthes tupmanniana is really meant to be a misspelling or is it rather a homony... Andreas Müller
10:53 AM bug #6523: Correct display of misspellings in synonymy
Hallo,
danke Henning für die Hinweise. Ich nehme mal einige weitere Leute mit ins Ticket, da dies sowohl von allge...
Andreas Müller
11:40 AM feature request #8304: Name page redirects to according taxon depending on query parameter
I don't think that these requirements are contradict the current implementation with the 'global' switch. As far as I... Andreas Kohlbecker
11:30 AM feature request #8304: Name page redirects to according taxon depending on query parameter
As far as I remember there is already a user request for this. At least I have discussed it with users.
Also I thin...
Andreas Müller
09:31 AM bug #6380 (Closed): typedesignations missing in homotypic group
Andreas Kohlbecker
09:30 AM bug #6380: typedesignations missing in homotypic group
Andreas Müller wrote:
> Until then why can't we use a ws call that collects all type designations of a single name i...
Andreas Kohlbecker
09:08 AM bug #6380: typedesignations missing in homotypic group
Until then why can't we use a ws call that collects all type designations of a single name in the homotypic group for... Andreas Müller
08:49 AM bug #6380: typedesignations missing in homotypic group
Andreas Müller wrote:
> The result seems to be correct. Do I understand the code correctly that you only call 1 webs...
Andreas Kohlbecker
08:04 AM bug #6380 (Feedback): typedesignations missing in homotypic group
The result seems to be correct. Do I understand the code correctly that you only call 1 webservice per homotypical gr... Andreas Müller
09:29 AM feature request #8390 (Closed): implement /portal/name/{uuuid}/typeDesignationsInHomotypicalGroup
copied from #6380.
This webservice should be used to speed up `type_designations_for_synonymy_group($synonymy_grou...
Andreas Kohlbecker
09:13 AM feature request #7932: Implement subject resolver for CdmPreferences
Andreas Kohlbecker wrote:
> Andreas Müller wrote:
> > Andreas K., do you already use the subject resolver in the pr...
Andreas Müller
08:32 AM feature request #7932: Implement subject resolver for CdmPreferences
Andreas Müller wrote:
> Andreas K., do you already use the subject resolver in the preference cache you use for vaad...
Andreas Kohlbecker
09:11 AM task #4177 (Closed): display of name relationships in synonymy broken
Andreas Kohlbecker
08:33 AM task #4177 (Feedback): display of name relationships in synonymy broken
So if this ticket is not about the comments in #note-3 and #note-4 but only about repairing and optimizing the name r... Andreas Müller

07/18/2019

08:49 PM feature request #7920: Possibility to define area specific status selection
An open issue is that it should also be available for local prefs (where it is maybe more difficult to implement beca... Andreas Müller
06:40 PM feature request #7920 (Feedback): Possibility to define area specific status selection
To me this looks like being solve including the open issues. Please check and move open issues to a new ticket if nee... Andreas Müller
08:46 PM feature request #8045: Improve handling of default values and override in local preferences
with the new implementation of distribution status with different subjects if allowOverride=false in DB prefs this do... Andreas Müller
08:04 PM feature request #8045: Improve handling of default values and override in local preferences
For the above issues see also #8323#note-4 Andreas Müller
04:21 PM feature request #8045: Improve handling of default values and override in local preferences
Andreas Müller wrote:
> Choosing "default" for local preference "nomenclatural status" has no effect. It uses the ex...
Andreas Müller
01:26 PM feature request #8045: Improve handling of default values and override in local preferences
For nomencl.Code. implementation is still missing or incorrect. Also we may discuss if in DB prefs we should allow "U... Andreas Müller
01:09 PM feature request #8045: Improve handling of default values and override in local preferences
Choosing "default" for local preference "nomenclatural status" has no effect. It uses the explicitly chosen values fr... Andreas Müller
01:06 PM feature request #8045 (Feedback): Improve handling of default values and override in local prefer...
Looks like this has been implemented in 5.8 so I switch milestone.
Are there open issues?
Andreas Müller
08:30 PM bug #8389 (Resolved): Correct handling of default values with allowOverride=false
It looks like currently the preferences are deleted no matter what the allowOverride value is. But if it is "false" s... Andreas Müller
08:10 PM bug #8385: Open issues in DB preferences
the above both fixes seem to work (though the last is only a workaround for a real fix (full delete of the preference)) Andreas Müller
05:55 PM bug #8385: Open issues in DB preferences
Patrick Plitzner wrote:
> Wouldn't it be better to just delete the preference if the config is `null`. `null` means...
Patrick Plitzner
05:54 PM bug #8385: Open issues in DB preferences
Andreas Müller wrote:
> >io.ABCD.config is stored in DB with value NULL even if nothing has changed, if this is defa...
Patrick Plitzner
04:33 PM bug #8385: Open issues in DB preferences
>io.ABCD.config is stored in DB with value NULL even if nothing has changed, if this is default value, the default sh... Andreas Müller
01:45 PM bug #8385: Open issues in DB preferences
After setting Publish Flag to default and reopening:
~~~
login : admin
editor version : 5.8.0.201907180811
serv...
Andreas Müller
01:39 PM bug #8385: Open issues in DB preferences
Patrick, can you have a look? Andreas Müller
01:34 PM bug #8385 (Closed): Open issues in DB preferences
* ~~Values on General page (Export/Import, Checklist perspective, Taxonnode Wizard) are not loaded correctly when reo... Andreas Müller
07:54 PM feature request #8256: Show all status preferences as table
CRITICAL:
Updating an existing list does not seem to work anymore. If I update and reopen the dialog everything is...
Andreas Müller
07:04 PM feature request #8256 (Feedback): Show all status preferences as table
By the way: if no area is selected the subject is /taxeditor which does not make much sense. It should be only "/". A... Andreas Müller
06:53 PM feature request #8256: Show all status preferences as table
In general this seems to work and is a great feature. Some minor issues: the table should show up below the status se... Andreas Müller
07:32 PM feature request #8323: Make nom.status and rank lists a CdmPreference
If I open a name which has a rank that is not available in the rank list, the rank is added to the list of available ... Andreas Müller
07:29 PM feature request #8323: Make nom.status and rank lists a CdmPreference
Also the prefs seem to work only after restarting TaxEditor. Maybe this is the main reason for the above mentioned is... Andreas Müller
07:11 PM feature request #8323 (Feedback): Make nom.status and rank lists a CdmPreference
Override handling does not yet work correctly for both of them. See #8045#note-9 and #8045#note-13 Andreas Müller
06:32 PM feature request #8058: Further issues for (local) preferences
Maybe we should split this ticket. Andreas Müller
05:45 PM feature request #8058 (Feedback): Further issues for (local) preferences
Katja Luther wrote:
> the common name language preference is added.
Can we still move "Available Languages" below...
Andreas Müller
06:31 PM feature request #8293: Distribution preferences for details view should be serverside preferences
Beside these issues the implementation works correctly as it looks like. This gives more consistency to data and UI. Andreas Müller
06:30 PM feature request #8293: Distribution preferences for details view should be serverside preferences
Is there a reason why if used in distribution editor, the Status field and the modifying text field in details view i... Andreas Müller
06:27 PM feature request #8293 (Feedback): Distribution preferences for details view should be serverside ...
Andreas Müller
06:27 PM feature request #8293: Distribution preferences for details view should be serverside preferences
The preference menu is not correct. You put it to UI-DistributionData-VocsAndStatus
UI is only for UI! (as the nam...
Andreas Müller
06:13 PM feature request #8293: Distribution preferences for details view should be serverside preferences
The fix seems to work. Katja, can you please check, why empty strings are possible here. It is a bit strange. In the ... Andreas Müller
05:27 PM feature request #8293: Distribution preferences for details view should be serverside preferences
Andreas Müller wrote:
> This error is a blocker!!
I tried to fix with 955fadf4. Will see if it works
Andreas Müller
05:12 PM feature request #8293: Distribution preferences for details view should be serverside preferences
This error is a blocker!! Andreas Müller
05:11 PM feature request #8293: Distribution preferences for details view should be serverside preferences
When trying to edit a distribution in facts view I get an IAE:
~~~
login : admin
editor version : 5.8.0.20190718...
Andreas Müller
05:45 PM feature request #8388 (Resolved): UTIS search block
Applied in changeset commit:cdm-dataportal|c05d1cfbddb1d4e5942efc85201405814a0f9a22. Andreas Kohlbecker
05:44 PM feature request #8388 (Closed): UTIS search block
implement a Drupal block which allows using the UTIS service Andreas Kohlbecker
04:20 PM bug #8375: ReferenceEllypsisFormatter produces too long stings in specific cases
Problem: long book titles, especially if the reference is part of book.
Example longest in book - reference
![]...
Wolf-Henning Kusber
04:19 PM feature request #7932: Implement subject resolver for CdmPreferences
Andreas K., do you already use the subject resolver in the preference cache you use for vaadin? Andreas Müller
04:18 PM bug #7849: Improve DB Preferences handling and saving in TaxEditor
To me this ticket seems to be fixed and open issues are moved to new tickets. In general the structure for handling d... Andreas Müller
03:54 PM bug #7849: Improve DB Preferences handling and saving in TaxEditor
Andreas Müller wrote:
> On local prefs Name Details View page the "Restore Defaults" button seems to be enabled even...
Andreas Müller
03:52 PM bug #7849: Improve DB Preferences handling and saving in TaxEditor
Andreas Müller wrote:
> With empty preferences when only the DistrEditor page is opened without any change afterward...
Andreas Müller
03:05 PM bug #8386 (Closed): Disable admin menu when not logged into a DB
currently it is shown after (re)start which does not make sense as admin functionality is always related to DB login. Andreas Müller
01:14 PM feature request #8384 (New): Consider to use icon links for all reference citations
Candidates:
* Bibliography
Andreas Kohlbecker
01:13 PM feature request #8320 (Closed): Links to reference page as appendend icon instead of having the w...
Andreas Müller wrote:
> Do we have any rules where these icons are used? E.g. in the bibliography they do not seem t...
Andreas Kohlbecker
12:39 PM feature request #8320: Links to reference page as appendend icon instead of having the whole cita...
Do we have any rules where these icons are used? E.g. in the bibliography they do not seem to be used yet though it m... Andreas Müller
12:37 PM feature request #8320: Links to reference page as appendend icon instead of having the whole cita...
Andreas Kohlbecker wrote:
> And this one
>
> http://test.e-taxonomy.eu/dataportal/preview/cichorieae/cdm_datapor...
Andreas Müller
08:13 AM feature request #8320: Links to reference page as appendend icon instead of having the whole cita...
And this one
http://test.e-taxonomy.eu/dataportal/preview/cichorieae/cdm_dataportal/taxon/a67fc2ab-1452-4c32-84b6...
Andreas Kohlbecker
08:05 AM feature request #8320: Links to reference page as appendend icon instead of having the whole cita...
http://int.e-taxonomy.eu/dataportal/integration/reference/cdm_dataportal/taxon/c246856f-c03e-4cb7-ac92-d9b2864084cd
...
Andreas Kohlbecker
12:51 PM feature request #8294 (Closed): Make display of ID in source and ID Namespace configurable
translated preferences. Closing the ticket. Patrick Plitzner
12:12 PM feature request #8294 (Feedback): Make display of ID in source and ID Namespace configurable
All the rest seems to work and looks ok. Andreas Müller
12:08 PM feature request #8294: Make display of ID in source and ID Namespace configurable
same in local preference (if this is different code) Andreas Müller
12:06 PM feature request #8294: Make display of ID in source and ID Namespace configurable
Server side preferences are not yet translated (Submenu Sources and Labels on page) (update code before changing as ... Andreas Müller
11:31 AM bug #8260 (Closed): Details and Supplemental Data View do not save the expansion state of sections
Patrick Plitzner
10:41 AM bug #8260: Details and Supplemental Data View do not save the expansion state of sections
Fix 20b35d99 seems to solve the problem. I think we can close the ticket. Andreas Müller
10:55 AM bug #8129: Load images asynchronously in media details view
Andreas Müller wrote:
>...
> * the size of the image is recomputed, most often the size can be computed from metada...
Andreas Müller
10:52 AM bug #8129: Load images asynchronously in media details view
Andreas Müller wrote:
> Also when switing between 2 entries in bulk editor with <2sec between switches often the ent...
Andreas Müller
10:46 AM bug #8129: Load images asynchronously in media details view
The expand problem seems to be solved (see #8260). Final question: what is the default. I suggest to have "expanded" ... Andreas Müller
10:42 AM bug #8374: Save genus generated for a species with a different reference
Problem with bibliographic reference Part of Book.
![](picture938-1.png)
![](picture938-2.png)
hint: Book titel co...
Wolf-Henning Kusber
10:34 AM bug #6523: Correct display of misspellings in synonymy
Als unbeteiligter Leser halte ich die Ausgabe für sachlich falsch oder zumindes für unverständlich. Erst mit externer... Wolf-Henning Kusber
08:16 AM bug #8287 (Closed): RegistrationServiceImpl.page( .... Collection<UUID> typeDesignationStatusUuid...
Andreas Kohlbecker
08:13 AM feature request #8304: Name page redirects to according taxon depending on query parameter
This is a misunderstanding. During the standup yesterday I was talking about a global switch which overrides the defa... Andreas Kohlbecker

07/17/2019

12:51 AM bug #8129: Load images asynchronously in media details view
Please test intensively e.g. with the 2 given media if the behavior is as you would expect for rapid data entry and c... Andreas Müller
12:50 AM bug #8129: Load images asynchronously in media details view
The loading does not stop immediately when a new URL is entered but should. Otherwise an image is shown which does no... Andreas Müller
12:48 AM bug #8129: Load images asynchronously in media details view
Andreas Müller wrote:
> Also when switing between 2 entries in bulk editor with <2sec between switches often the ent...
Andreas Müller
12:44 AM bug #8129: Load images asynchronously in media details view
Also when switing between 2 entries in bulk editor with <2sec between switches often the entries are not selected any... Andreas Müller
12:42 AM bug #8129: Load images asynchronously in media details view
Hmm, sometimes it works but most often it does not. Looks like you have at least to open a new bulk editor to make it... Andreas Müller
12:07 AM bug #8129: Load images asynchronously in media details view
Patrick Plitzner wrote:
> Andreas Müller wrote:
> > Now, the media details view is always collpased and the state i...
Andreas Müller
04:58 PM bug #8129: Load images asynchronously in media details view
Andreas Müller wrote:
> Now, the media details view is always collpased and the state is not saved - at least if I c...
Patrick Plitzner
04:43 PM bug #8129 (Feedback): Load images asynchronously in media details view
Now, the media details view is always collpased and the state is not saved - at least if I choose the above mentioned... Andreas Müller
10:36 AM bug #8129 (Resolved): Load images asynchronously in media details view
Implemented asynchronous loading in advanced media view.
Opened another ticket for placeholder image -> #8378
Patrick Plitzner
08:54 PM feature request #7408 (In Progress): [E+M] Support for preferred common names in data portal
we may discuss, if we simply use different features for th different common names. Therefore I take this ticket and a... Andreas Müller
07:28 PM bug #8287: RegistrationServiceImpl.page( .... Collection<UUID> typeDesignationStatusUuids ... ) f...
combination of types and none are searchable without errors in Vaadin and the portal. If this is the feedback for thi... Wolf-Henning Kusber
07:12 PM bug #8231 (Worksforme): Name relation non
Andreas Kohlbecker
07:07 PM task #5857 (Closed): show nomenclatural status for for representations of TaxonName
Andreas Kohlbecker
06:56 PM bug #8365 (Closed): DerivedUnitFacadeCacheStrategy should remove collection codes from accession ...
ok, so i am closing this issue now Andreas Kohlbecker
05:22 PM bug #8365: DerivedUnitFacadeCacheStrategy should remove collection codes from accession numbers
In the Youngia example the version with brackets is clearer.
Wolf-Henning Kusber
09:02 AM bug #8365 (Feedback): DerivedUnitFacadeCacheStrategy should remove collection codes from accessio...
Andreas Kohlbecker
09:02 AM bug #8365: DerivedUnitFacadeCacheStrategy should remove collection codes from accession numbers
removing the parentheses would affect all portals. Before doing this we should keep the effect on other portals in mi... Andreas Kohlbecker
06:45 PM feature request #8294 (Resolved): Make display of ID in source and ID Namespace configurable
All issues should be fixed now.
What still would be nice is if the disabled local preferences would reflect the st...
Patrick Plitzner
06:45 PM bug #8382 (Closed): Local Supplemental Data Source Preferences should reflect the state of admin ...
Copied from #8294:
"What still would be nice is if the disabled local preferences would reflect the state of the a...
Patrick Plitzner
06:07 PM task #8209: use ellypsed references for all reference comboboxes
last screen shot was misuse of an in-reference Wolf-Henning Kusber
06:06 PM task #8209: use ellypsed references for all reference comboboxes
Minor problem,
Name editor if a new bibliographic reference is entered with a very long title.
![](picture115-1.png)
Wolf-Henning Kusber
05:40 PM task #8209: use ellypsed references for all reference comboboxes
Name Editor with "Nomenclatural reference" is working. No problem because the maximum breadth of the drop down is siz... Wolf-Henning Kusber
07:58 AM task #8209: use ellypsed references for all reference comboboxes
I copied the latest problem to a new ticket: #8375
Did you check all editors with reference comboboxes? Is ellypsi...
Andreas Kohlbecker
05:59 PM bug #8381 (New): Closing the details view throws widget is disposed exception
steps to reproduce:
1. Open editor
1. Connect
1. Open a taxon
1. Close details view
Note: The exception is n...
Patrick Plitzner
05:45 PM feature request #8245 (Closed): Improve representation of DescriptionElementBase.timeperiod
The formatting of year only or year and month only looks ok now so we can close the ticket. Other open issues will be... Andreas Müller
05:45 PM bug #8375: ReferenceEllypsisFormatter produces too long stings in specific cases
Die bibliographische Referenz (Journal) wird hier nicht abgekürzt. Je kürzer der Journal title desto eher Verwechselu... Wolf-Henning Kusber
08:04 AM bug #8375: ReferenceEllypsisFormatter produces too long stings in specific cases
This could an effect of the changes which have been applied for #8375
Andreas Kohlbecker
07:55 AM bug #8375 (New): ReferenceEllypsisFormatter produces too long stings in specific cases
Again there are extremely long entries. The breadth of the dropdown box differs extremly. (was originally reported in... Andreas Kohlbecker
05:27 PM feature request #8304 (Feedback): Name page redirects to according taxon depending on query param...
I do not fully understand this solution. I thought it should be configurable for each location that has a link to a n... Andreas Müller
05:14 PM feature request #8320 (Feedback): Links to reference page as appendend icon instead of having the...
Is there an example somewhere on test server or integration? Andreas Müller
05:06 PM bug #8260: Details and Supplemental Data View do not save the expansion state of sections
Andreas Müller wrote:
> Patrick Plitzner wrote:
> > Andreas Müller wrote:
> > > Now, nomenclatural reference is ne...
Patrick Plitzner
04:33 PM bug #8260: Details and Supplemental Data View do not save the expansion state of sections
Patrick Plitzner wrote:
> Andreas Müller wrote:
> > Now, nomenclatural reference is never expanded. Maybe it was li...
Andreas Müller
11:03 AM bug #8260: Details and Supplemental Data View do not save the expansion state of sections
Andreas Müller wrote:
> Now, nomenclatural reference is never expanded. Maybe it was like this before already and I ...
Patrick Plitzner
04:56 PM feature request #8283 (Closed): Allow adding media to terms in taxeditor
Created new ticket for remaining issues -> #8380 Patrick Plitzner
04:31 PM feature request #8283: Allow adding media to terms in taxeditor
Patrick Plitzner wrote:
> Just when I wrote the last comment it happened. But still, it is very unlikely that this w...
Andreas Müller
10:56 AM feature request #8283: Allow adding media to terms in taxeditor
Just when I wrote the last comment it happened. But still, it is very unlikely that this will happen to a user. We ma... Patrick Plitzner
10:51 AM feature request #8283: Allow adding media to terms in taxeditor
Andreas Müller wrote:
> Patrick Plitzner wrote:
> > Andreas Müller wrote:
> > > The data may got lost the followin...
Patrick Plitzner
04:56 PM bug #8380 (New): Unsaved media gets lost in details view
Copied from #8283:
On rem_conf_am open features.
* Got to Vocabulary "Untitled" and open term "test2".
* Open ...
Patrick Plitzner
11:49 AM bug #8368 (Closed): problems in compose_cdm_specimen_or_observation_tree_entry()
error message suppressed and visible effect of the problem solved, the further discussion and post release review tas... Andreas Kohlbecker
11:47 AM bug #8370 (Closed): feature blocks created by compose_description_element_individuals_association...
problem solved discussion and post release review task copied to #8379 Andreas Kohlbecker
11:47 AM feature request #8135 (New): Implement verbatim type information in TaxEditor
temporary disabled textual type designation and moved to 5.9 milestone where the necessary model changes will be impl... Patrick Plitzner
11:46 AM report #8379 (New): Review strange specimen implementations
Please
* #8368
* #8370
I am repeating according comments from the original tickets here:
----
# #8370
...
Andreas Kohlbecker
10:19 AM feature request #8378 (New): Show placeholder for asynchronously loaded images in details view
Patrick Plitzner
08:44 AM bug #8377 (Closed): TypeDesignationsEditors: Delete must not be allowe before the workingset is s...
this affects both:
* NameTypeDesignationEditor
* SpecimenTypeDesignationWorkingsetEditor
Im RegistrationWorkli...
Andreas Kohlbecker
08:39 AM bug #8376 (Closed): RegistrationWorkingsetEditor: prevent clicking any futher buttons after the o...
Andreas Kohlbecker
08:10 AM bug #7845 (Closed): NamePopupEditor new Genus button should clear the genus name field in the new...
Andreas Kohlbecker
08:08 AM feature request #8284 (Closed): starting a registration for an existing name causes the name edit...
Andreas Kohlbecker
07:49 AM feature request #7966 (Closed): Registration search simplify type select options
Andreas Kohlbecker
07:48 AM feature request #8306 (Closed): Registration page links to registered taxon name
Andreas Kohlbecker

07/16/2019

07:58 PM feature request #8339: Completely remove the potentially redundant 'acceptedFor' parameter from s...
OK, now I at least understand what it is used for. However, I doubt (but am not sure) that this is still needed. Mayb... Andreas Müller
06:57 PM feature request #8306: Registration page links to registered taxon name
fine, ticket can be closed. Wolf-Henning Kusber
06:54 PM feature request #7966: Registration search simplify type select options
Lectotype gives back: Specimen types AND Name types of genera, species and below = correct
Problem fully resolved....
Wolf-Henning Kusber
06:45 PM feature request #7966: Registration search simplify type select options
Original designation gives back: Name types of genera = correct
Holotype gives back: Specimen types of species and b...
Wolf-Henning Kusber
06:29 PM task #8209: use ellypsed references for all reference comboboxes
Again there are extremely long entries. The breadth of the dropdown box differs extremly.
![](picture177-1.png)
Wolf-Henning Kusber
06:18 PM bug #8365: DerivedUnitFacadeCacheStrategy should remove collection codes from accession numbers
Quote
"OK, parentheses are removed again."
The brackets are reinstated not removed but should be removed, see S...
Wolf-Henning Kusber
12:08 PM bug #8365 (Resolved): DerivedUnitFacadeCacheStrategy should remove collection codes from accessio...
OK, parentheses are removed again. Andreas Kohlbecker
06:11 PM feature request #8284: starting a registration for an existing name causes the name editor to po...
Info for Genera without reference:
The chosen name needs to be completed before it can be used. Please add the nome...
Wolf-Henning Kusber
06:09 PM bug #7187 (Closed): ReferenceEditor: saving with DOI casues exception
Andreas Kohlbecker
05:46 PM bug #7187: ReferenceEditor: saving with DOI casues exception
Review fehlte. Feature seit Monaten ohne Beanstandung im Routinebetrieb der Release Version. Ticket kann geschlossen ... Wolf-Henning Kusber
06:00 PM bug #7845: NamePopupEditor new Genus button should clear the genus name field in the new editor
new error: #8374 Wolf-Henning Kusber
05:56 PM bug #7845: NamePopupEditor new Genus button should clear the genus name field in the new editor
Ticket can be closed, but "Save" error when an uninominal should be saved. Wolf-Henning Kusber
06:00 PM bug #8374 (Duplicate): Save genus generated for a species with a different reference
Test system:
New species entered. Genus not in list.
Input "new" genus with reference entered. Saving result in a...
Wolf-Henning Kusber
05:56 PM bug #7885 (Worksforme): registration search by name finds also typifications for this name
this is now obviously working:
http://test.e-taxonomy.eu/dataportal/preview/phycobank/cdm_dataportal/registration-...
Andreas Kohlbecker
05:51 PM feature request #8294 (Feedback): Make display of ID in source and ID Namespace configurable
Patrick, can you try to fix the open issues? Andreas Müller
05:47 PM feature request #8294: Make display of ID in source and ID Namespace configurable
yes, it is switched and also in both views it is called "ID in Namespace" but should be "ID Namespace". Also ID Names... Andreas Müller
05:38 PM feature request #6709 (Closed): Do not show UUID on media page

And now to your last question:
> By the way, why have we removed the possibility to show multiple representation...
Andreas Kohlbecker
05:35 PM feature request #6709: Do not show UUID on media page
Andreas Müller wrote:
> By the way, is there a reason why we show the file name below image? Sometimes it is very ug...
Andreas Kohlbecker
05:30 PM feature request #6709: Do not show UUID on media page
Andreas Müller wrote:
> Andreas Kohlbecker wrote:
> > e.g.: http://int.e-taxonomy.eu/dataportal/integration/referen...
Andreas Kohlbecker
02:41 PM feature request #6709 (Feedback): Do not show UUID on media page
Feel free to create new tickets from the above questions. Andreas Müller
02:41 PM feature request #6709: Do not show UUID on media page
Connected with the representation is the question which filename to use different representations have different file... Andreas Müller
02:39 PM feature request #6709: Do not show UUID on media page
By the way, why have we removed the possibility to show multiple representations on the media page? It would be nice ... Andreas Müller
02:35 PM feature request #6709: Do not show UUID on media page
By the way, is there a reason why we show the file name below image? Sometimes it is very ugly like in the above ment... Andreas Müller
02:14 PM feature request #6709: Do not show UUID on media page
Andreas Kohlbecker wrote:
> e.g.: http://int.e-taxonomy.eu/dataportal/integration/reference/cdm_dataportal/media/d0b...
Andreas Müller
05:34 PM feature request #8373 (New): media page: avoid showing ugly file names as title replacement

By the way, is there a reason why we show the file name below image? Sometimes it is very ugly like in the above me...
Andreas Kohlbecker
05:29 PM feature request #8372 (New): media page: show media type in the page title
distinguish the different media types an to adapt the title accordingly: Instead of "Media ...", "Image ...", "Video ... Andreas Kohlbecker
05:23 PM bug #8340 (Feedback): is accepted for Footnotes missing and with wrong index
Andreas Kohlbecker
05:23 PM bug #8340: is accepted for Footnotes missing and with wrong index
Andreas Müller wrote:
> I do not really understand the problem. On http://test.e-taxonomy.eu/dataportal/preview/cich...
Andreas Kohlbecker
02:07 PM bug #8340: is accepted for Footnotes missing and with wrong index
I do not really understand the problem. On http://test.e-taxonomy.eu/dataportal/preview/cichorieae/cdm_dataportal/tax... Andreas Müller
05:22 PM bug #8260 (Feedback): Details and Supplemental Data View do not save the expansion state of sections
Now, nomenclatural reference is never expanded. Maybe it was like this before already and I simply did not recognize. Andreas Müller
05:15 PM feature request #8283 (Feedback): Allow adding media to terms in taxeditor
Patrick Plitzner wrote:
> Andreas Müller wrote:
> > The data may got lost the following way.
> >
> > * Open term...
Andreas Müller
05:13 PM feature request #6316 (Closed): display source references of media objects in media page
using ; as separator for multiple sources: commit:cdm-dataportal|c021779a Andreas Kohlbecker
02:55 PM feature request #6316 (Feedback): display source references of media objects in media page
Generally this works. Only we should replace "," by ";" as separator for multiple sources. The former is often part o... Andreas Müller
05:03 PM feature request #8245: Improve representation of DescriptionElementBase.timeperiod
here it is: http://int.e-taxonomy.eu/dataportal/integration/reference/cdm_dataportal/taxon/c246856f-c03e-4cb7-ac92-d9... Andreas Kohlbecker
02:59 PM feature request #8245: Improve representation of DescriptionElementBase.timeperiod
Andreas Kohlbecker wrote:
> done, for testing you can use for example http://edit.test/d7/reference_int/cdm_dataport...
Andreas Müller
05:02 PM bug #8371 (New): When creating a new term for a vocabulary the term should have the focus afterwards
... maybe even better, the focus should go to the details view label field to allow immediately enter the label for t... Andreas Müller
05:02 PM bug #8343: potential timezone problem in application stack
Andreas Müller wrote:
> I don't understand why this is rejected. The problem still exists as you can see in the abov...
Andreas Kohlbecker
04:47 PM bug #8343: potential timezone problem in application stack
Andreas Müller wrote:
> Andreas Kohlbecker wrote:
> > Maybe this is an issue which comes from the time when the tim...
Andreas Kohlbecker
03:18 PM bug #8343: potential timezone problem in application stack
Andreas Kohlbecker wrote:
> Maybe this is an issue which comes from the time when the timezone data was not correctl...
Andreas Müller
03:16 PM bug #8343 (Feedback): potential timezone problem in application stack
I don't understand why this is rejected. The problem still exists as you can see in the above link. It might not be a... Andreas Müller
04:47 PM bug #8129: Load images asynchronously in media details view
Also we may want to have a replacement image which shows "loading" or something similar while the image is loading. A... Andreas Müller
04:44 PM bug #8129 (Feedback): Load images asynchronously in media details view
It seems to work only in the simple view but not in the advanced view.
As an example use rem_conf_am, bulk editor ...
Andreas Müller
04:44 PM bug #8370: feature blocks created by compose_description_element_individuals_association() are br...
Andreas Müller wrote:
> I think you accidentaly changed back to status "new"
thanx for fixing this Andreas.
@K...
Andreas Kohlbecker
04:08 PM bug #8370 (Resolved): feature blocks created by compose_description_element_individuals_associati...
I think you accidentaly changed back to status "new" Andreas Müller
04:04 PM bug #8370 (New): feature blocks created by compose_description_element_individuals_association() ...
this bug has been introduced with commit:cdm-dataportal|e89c1115 Andreas Kohlbecker
04:03 PM bug #8370 (Resolved): feature blocks created by compose_description_element_individuals_associati...
Applied in changeset commit:cdm-dataportal|43d01429e6dbd2d56970902ad525376f00b699b1. Andreas Kohlbecker
04:00 PM bug #8370 (Closed): feature blocks created by compose_description_element_individuals_association...
For example Achnanthidium exiguum (Grunow) Czarn. in Algaterra shows multiple errors in the error box:
~~~
Warnin...
Andreas Kohlbecker
03:20 PM feature request #8320 (Resolved): Links to reference page as appendend icon instead of having the...
Andreas Müller
03:17 PM bug #8369 (Closed): SpecimenTypeDesignationDTO can not be serialized to JSON
Andreas Kohlbecker
02:19 PM bug #8369 (Closed): SpecimenTypeDesignationDTO can not be serialized to JSON
SpecimenTypeDesignationDTO is missing getters and setters and thus can not be serialized Andreas Kohlbecker
03:15 PM bug #8368 (Feedback): problems in compose_cdm_specimen_or_observation_tree_entry()
Katja, please help disentangling the situation. Andreas Kohlbecker
03:13 PM bug #8368: problems in compose_cdm_specimen_or_observation_tree_entry()
After fixing the problems in this code i noticed that this code is not generating any output at all.
I attempted t...
Andreas Kohlbecker
02:19 PM bug #8368: problems in compose_cdm_specimen_or_observation_tree_entry()
working on this issue I found another issue: #8369 Andreas Kohlbecker
02:18 PM bug #8368 (In Progress): problems in compose_cdm_specimen_or_observation_tree_entry()
Andreas Kohlbecker
12:10 PM bug #8368 (Closed): problems in compose_cdm_specimen_or_observation_tree_entry()
Hallo Katja,

ich leite das mal an dich weiter, denn es gibt hier ein Problem mit deinem Kode in compose_cdm_speci...
Andreas Kohlbecker
03:14 PM task #8118: Update MySQL drivers
Andreas Kohlbecker wrote:
> **The proper solution it the timezone problem is documented at MySqlFaq#The-server-time-...
Andreas Müller
12:48 PM feature request #7791 (Closed): Visualize the phycobank higher taxon graph
No improvements are needed by now Andreas Kohlbecker
12:47 PM bug #8321 (Closed): Namepage shows wrong taxa as related to the name
Wolf-Henning Kusber wrote:
> Both Eunotia krammeri with different Author teams are not mixed anymore. The described ...
Andreas Kohlbecker
12:41 PM bug #8278 (Closed): LazyInitializationException (LIE) in ReferenceEllypsisCaptionGenerator
closing, since this problem no longer occurred. Andreas Kohlbecker
12:13 PM feature request #8366 (Closed): Same typedesignation display for registration page as in name page
Andreas Kohlbecker

07/15/2019

04:30 PM bug #8233: [Follow up] Creating type duplicates
Move to next milestone for 5.8 release Patrick Plitzner
04:14 PM bug #8225: Deleting one of two type designations removes both
Move to next milestone to implement a better solution than the temporary fix. Patrick Plitzner
04:02 PM feature request #6849: [DISCUSS] How to handle "kind of" term creation in TermEditor
Moving to next milestone for further discussion Patrick Plitzner
03:58 PM feature request #8135 (Feedback): Implement verbatim type information in TaxEditor
@Andreas: There was something Walter wanted but I can't remember what it was. Depending on that we may close this tic... Patrick Plitzner
03:27 PM task #8130: Check if related feature data is cleared when supported facts type is changed
Move to next milestone for remaining discussion Patrick Plitzner
03:26 PM feature request #8044: Add "Move to..." menu to term editor
Move to next milestone because this is still considered experimental Patrick Plitzner
03:25 PM feature request #8248: Implement OWL import
Move to next milestone because this is still considered experimental Patrick Plitzner
03:24 PM feature request #6774: Implement OWL export
Move to next milestone because this is still considered experimental Patrick Plitzner
03:23 PM feature request #8335 (Resolved): Store character matrix table state as DB preference
Patrick Plitzner
03:22 PM feature request #8335: Store character matrix table state as DB preference
Move to next milestone because the character matrix is still considered experimental Patrick Plitzner
03:20 PM feature request #8242: Implement filtered combo boxes for state selection in CharacterMatrix
Move to next milestone because this is still considered experimental Patrick Plitzner
03:19 PM feature request #8294: Make display of ID in source and ID Namespace configurable
Tested on nightly: The admin and local preferences work as expected BUT they seem to be swapped. Also the one prefere... Patrick Plitzner
02:36 PM feature request #8283: Allow adding media to terms in taxeditor
Added #8367 for remaining issues and discussion
All the rest should be implemented and functional now
Patrick Plitzner
02:34 PM bug #8367 (New): Advanced media view is not available for term media
Copied from #8283:
"With the current implementation it is not possible to switch between advanced and simple view bu...
Patrick Plitzner
02:29 PM feature request #8286 (Closed): Add cm as unit term to CDM
Testes and already used in additivity_ontology on test server. Patrick Plitzner
02:22 PM feature request #8351 (Closed): name page: show type designations with map
Andreas Kohlbecker
11:25 AM feature request #6238: add name of sec reference to display of concept relations in portal and a ...
Hi Gabi,
ich habe gerade dieses Ticket hier gefunden - ist erledigt.
Kannst du mal gucken ob das jetzt soweit O...
Andreas Kohlbecker

07/13/2019

06:11 PM feature request #8366: Same typedesignation display for registration page as in name page
Image position and type positions are fine. The source interrupt the reading but is an important reference.
![](pict...
Wolf-Henning Kusber
05:55 PM feature request #8366: Same typedesignation display for registration page as in name page
Name and Registration pages are fine.
For types, map and specimens apear first, than the related name. I like this!
...
Wolf-Henning Kusber

07/12/2019

08:25 PM feature request #8366: Same typedesignation display for registration page as in name page
Wolf-Henning Kusber wrote:
> No review, may be I was to fast:
> http://test.e-taxonomy.eu/dataportal/preview/phyco...
Andreas Kohlbecker
07:29 PM feature request #8366: Same typedesignation display for registration page as in name page
Name page okay: http://test.e-taxonomy.eu/dataportal/preview/phycobank/cdm_dataportal/name/8ad8bc6d-b413-4af1-8876-fb... Wolf-Henning Kusber
07:28 PM feature request #8366: Same typedesignation display for registration page as in name page
No review, may be I was to fast:
http://test.e-taxonomy.eu/dataportal/preview/phycobank/cdm_dataportal/registration...
Wolf-Henning Kusber
05:11 PM feature request #8366: Same typedesignation display for registration page as in name page
please review Andreas Kohlbecker
05:10 PM feature request #8366 (Resolved): Same typedesignation display for registration page as in name page
Applied in changeset commit:cdm-dataportal|41a348be0fd4782a984dd5f4e65069d7c7cb99f4. Andreas Kohlbecker
03:42 PM feature request #8366 (Closed): Same typedesignation display for registration page as in name page
The registration page should display the typedesignation in the same ways as in the name page.
A map should also be ...
Andreas Kohlbecker
07:15 PM bug #8365: DerivedUnitFacadeCacheStrategy should remove collection codes from accession numbers
Reviewing the screen shot:
First representation: Lectotype (reference) gathering(Code accession number)
Second repr...
Wolf-Henning Kusber
11:59 AM bug #8365 (Feedback): DerivedUnitFacadeCacheStrategy should remove collection codes from accessio...
I removed the parentheses but these now causes inconsistent display:
![](picture686-1.png)
What do you think He...
Andreas Kohlbecker

07/11/2019

06:04 PM bug #8365 (Resolved): DerivedUnitFacadeCacheStrategy should remove collection codes from accessio...
We should also consider removing the parentheses from the accession number since this seems to be useless in most sit... Andreas Kohlbecker
06:00 PM bug #8365 (Closed): DerivedUnitFacadeCacheStrategy should remove collection codes from accession ...
Users frequently enter the collection code with the accession number which can cause to code to appear duplicated in ... Andreas Kohlbecker
04:24 PM bug #8364 (New): ext-links module: problems
Hallo,
wo wir gerade vom Portal reden...
Ich habe mal den External links – sidebar getestet (bei den Cactaceae, O...
Andreas Kohlbecker
02:23 PM bug #8129: Load images asynchronously in media details view
> This also holds for the image gallery view if "show thumbnails" is switched on (but hopefully there only thumbnail ... Patrick Plitzner
02:19 PM bug #8129 (Resolved): Load images asynchronously in media details view
Patrick Plitzner

07/09/2019

11:12 AM feature request #8358 (Duplicate): Show name type only if rank is higher than species
Andreas Kohlbecker
10:44 AM feature request #8358: Show name type only if rank is higher than species
this seems like duplicate of #7690 Andreas Kohlbecker
10:39 AM feature request #8358 (Duplicate): Show name type only if rank is higher than species
Show name type only if rank is higher than species in Vaadin.
This might enhance usability of the type section for...
Wolf-Henning Kusber

07/08/2019

01:00 PM feature request #8352 (Closed): name page: show nomenclatorical acts
Yes, closed now. Wolf-Henning Kusber
12:05 PM feature request #8352: name page: show nomenclatorical acts
So we can close this ticket? Andreas Kohlbecker
12:55 PM feature request #8351: name page: show type designations with map
The map is now being suppressed if there are no points to show, Andreas Kohlbecker
12:04 PM feature request #8354 (Closed): taxonomic registration search by name finds also typifications fo...
Andreas Kohlbecker
11:17 AM feature request #8354: taxonomic registration search by name finds also typifications for this name
Name types for genera can be found by entering the name (fake entry for "Phacus"). Ticket might be closed (but see Pl... Wolf-Henning Kusber
11:02 AM task #8201: test all delete functionality in the RegistrationUI
Wolf-Henning Kusber wrote:
> Article not linked to any registration can be deleted without problem.
... but is no...
Wolf-Henning Kusber
10:50 AM task #8201: test all delete functionality in the RegistrationUI
Delete button is available for references with registrations. Trying to delete (which realy does not any sense) produ... Wolf-Henning Kusber
10:43 AM task #8201: test all delete functionality in the RegistrationUI
Article not linked to any registration can be deleted without problem. Wolf-Henning Kusber
10:36 AM task #8201: test all delete functionality in the RegistrationUI
Saved specimen type in Registration (preparation): full functionality.
Saved name specimen type in Registration (pre...
Wolf-Henning Kusber

07/05/2019

08:19 PM feature request #8352: name page: show nomenclatorical acts
Example for checking (including data cleaning issues to be solved by whk):
Achnanthes austriaca
name is not regis...
Wolf-Henning Kusber
07:58 PM feature request #8354: taxonomic registration search by name finds also typifications for this name
Lectotypes/Epitypes of names are found by th name. Issue solved.
For name types of rank=genus and higher no data a...
Wolf-Henning Kusber
07:33 PM feature request #8351: name page: show type designations with map
Sorry, an issue for georeferences not entered. Please see:
Eunotia tauntoniensis Hust. Type: United States of Americ...
Wolf-Henning Kusber
11:57 AM feature request #8351: name page: show type designations with map
Works fine, ticket can be closed. Wolf-Henning Kusber

07/04/2019

12:02 AM feature request #8351: name page: show type designations with map
please review Andreas Kohlbecker
10:39 PM feature request #8351 (Resolved): name page: show type designations with map
Applied in changeset commit:cdm-dataportal|14076b88ce598053035a48076f0a8f0af5c99cd3. Andreas Kohlbecker
06:59 PM feature request #8351 (Closed): name page: show type designations with map
show the name type and specimen type designations on the name page. In case the type specimens are having location da... Andreas Kohlbecker
12:02 AM feature request #8354 (Resolved): taxonomic registration search by name finds also typifications ...
done. please review Andreas Kohlbecker
09:17 PM feature request #8354 (Closed): taxonomic registration search by name finds also typifications fo...
The search for Registrations via the classification graph misses finding registrations with are only associated with ... Andreas Kohlbecker
12:00 AM feature request #8352: name page: show nomenclatorical acts
please review Andreas Kohlbecker
10:39 PM feature request #8352 (Resolved): name page: show nomenclatorical acts
Applied in changeset commit:cdm-dataportal|efff6ee1db489abd192b1193e652f25978fc2441. Andreas Kohlbecker
07:06 PM feature request #8352 (Closed): name page: show nomenclatorical acts
show Registrations on the name page Andreas Kohlbecker
07:18 PM bug #8353 (New): nomenclatural and bibliographic in-reference displayed
The nomenclatural author team is suplemented by the bibliographical author team, this is misleading.
Example: http...
Wolf-Henning Kusber
03:18 PM feature request #8256 (In Progress): Show all status preferences as table
there is a table of all area specific status preferences on the admin distribution preference page. It is possible to... Katja Luther
02:11 PM bug #6380: typedesignations missing in homotypic group
please review, e.g. at the example of http://test.e-taxonomy.eu/dataportal/preview/cichorieae/cdm_dataportal/taxon/a6... Andreas Kohlbecker
02:09 PM bug #6380 (Resolved): typedesignations missing in homotypic group
Applied in changeset commit:cdm-dataportal|b059b449f976cd7e198a3e21c05e38fb038ba1eb. Andreas Kohlbecker
01:17 PM bug #8349 (Closed): NPE in ParseHandler when parsing name without nomencl reference
Tested local hotfix branch. Created a new taxon and, in the name editor, added and edited misapplications and synonym... Patrick Plitzner
11:55 AM bug #8349 (Resolved): NPE in ParseHandler when parsing name without nomencl reference
please review, we need an hotfix because this error is always thrown if someone wants to create a new name without th... Katja Luther
11:51 AM bug #8349 (Closed): NPE in ParseHandler when parsing name without nomencl reference
when parsing name without nomenclatural reference the following NPE is thrown:
~~~ text
Caused by: java.lang.Null...
Katja Luther
12:23 PM feature request #8283 (Resolved): Allow adding media to terms in taxeditor
this seems to work now. (the details view is still empty when changing to referencing objects view, but adding the me... Katja Luther
12:01 PM bug #8347 (Closed): point map zooms to wrong area when using sphericalMercator maps like OpenTopo...
Andreas Kohlbecker
09:50 AM bug #8347: point map zooms to wrong area when using sphericalMercator maps like OpenTopo OSM etc.
The isohypse is very helpfull.
Just a minor issue remaining, when trying to zoom into Berlin this is easy and fast...
Wolf-Henning Kusber
12:01 PM feature request #8350 (Closed): Search dialog for named areas should work with abbreviations
The search dialog for named areas should be configurable whether the seach should be over the label, or one of the ab... Katja Luther
11:34 AM feature request #8346 (Closed): Curators and admins can edit arbitrary Annotations (Notes)
Selecting no term type is ok. These annotations are handled as untyped.
The new termtype 'Public Note' needs to be...
Andreas Kohlbecker
09:59 AM feature request #8346: Curators and admins can edit arbitrary Annotations (Notes)
Fields are implemented. Additional field can be added.
Question: should we take one entry as default (e.g. edition...
Wolf-Henning Kusber
10:54 AM feature request #7620 (Closed): RegistrationSearch implemented with Reference filter
Andreas Kohlbecker
09:33 AM feature request #7620: RegistrationSearch implemented with Reference filter
Perfectly solved! This enhances the usabiliy of PhycoBank significantly.
Search functionality is available for
st...
Wolf-Henning Kusber

07/03/2019

06:19 PM bug #8347: point map zooms to wrong area when using sphericalMercator maps like OpenTopo OSM etc.
nicely done:
our example with NZ and DE: Planothidium victori:
http://test.e-taxonomy.eu/dataportal/preview/phyco...
Wolf-Henning Kusber
06:05 PM bug #8347: point map zooms to wrong area when using sphericalMercator maps like OpenTopo OSM etc.
issue solved, please review Andreas Kohlbecker
04:02 PM bug #8347 (Resolved): point map zooms to wrong area when using sphericalMercator maps like OpenTo...
Applied in changeset commit:cdm-dataportal|95aba8b561b3695d047b50a25a24fc41f1f83b32. Andreas Kohlbecker
04:00 PM bug #8347 (Closed): point map zooms to wrong area when using sphericalMercator maps like OpenTopo...
example:
* https://www.phycobank.org/cdm_dataportal/taxon/6e0895b4-64ee-4b1a-ba87-403ee7888f94
* http://test.e-t...
Andreas Kohlbecker
04:47 PM feature request #7620: RegistrationSearch implemented with Reference filter
see above. The filter is not working.
With the given search strings all published registrations from new to old are ...
Wolf-Henning Kusber
12:57 PM feature request #7620: RegistrationSearch implemented with Reference filter
The test server was not up to date. The problem which was causing this is fixed now. Please test again. Andreas Kohlbecker
09:44 AM feature request #7620: RegistrationSearch implemented with Reference filter
Field "Publication" available,
search functionality not given.
"Baikal" gives back Baikal-Taxa + African etc. taxa
...
Wolf-Henning Kusber
04:31 PM bug #8337: internal error, name type status missing, reference in name type not updated
The duplicate type (first one) cannot be deleted in Vaadin, because it is not possible to open the record and to get ... Wolf-Henning Kusber
03:16 PM bug #8337 (Worksforme): internal error, name type status missing, reference in name type not updated
This problem can not be reproduced on the test system. The duplicate name type designations can be removed by deletin... Andreas Kohlbecker

07/02/2019

06:18 PM feature request #8346: Curators and admins can edit arbitrary Annotations (Notes)
please review
(the solution is not a beauty but it is working!)
Andreas Kohlbecker
06:17 PM feature request #8346 (Resolved): Curators and admins can edit arbitrary Annotations (Notes)
Applied in changeset commit:cdm-vaadin|c02fc11ae73482b118a48cfb4fca97e7302bda1f. Andreas Kohlbecker
05:58 PM feature request #8346 (Closed): Curators and admins can edit arbitrary Annotations (Notes)
The FilterableAnnotationsField should offer the option to edit arbitrary notes (annotations) in all views where it is... Andreas Kohlbecker
04:14 PM feature request #7620: RegistrationSearch implemented with Reference filter
ready for review Andreas Kohlbecker
03:15 PM feature request #7621 (Closed): registration search also covers typified names
fully solved Andreas Kohlbecker
03:14 PM feature request #8330 (Closed): RegistrationDao search method
fully solved Andreas Kohlbecker
03:11 PM bug #8287: RegistrationServiceImpl.page( .... Collection<UUID> typeDesignationStatusUuids ... ) f...
please review Andreas Kohlbecker
03:10 PM bug #8287 (Resolved): RegistrationServiceImpl.page( .... Collection<UUID> typeDesignationStatusUu...
Applied in changeset commit:cdmlib|c40f420c355ee29b3b31e575c8d630f59cf55c0e. Andreas Kohlbecker
01:44 PM feature request #8345 (Closed): RegistrationListView: filter option for publication
Andreas Kohlbecker
01:42 PM feature request #8345 (Resolved): RegistrationListView: filter option for publication
Applied in changeset commit:cdm-vaadin|c609114c696fe3512d2c485b9d4e6a1a52dafac9. Andreas Kohlbecker
01:41 PM feature request #8345 (Closed): RegistrationListView: filter option for publication
extend the existing filters by a text field for publication citation patterns Andreas Kohlbecker
01:43 PM bug #7885 (In Progress): registration search by name finds also typifications for this name
Andreas Kohlbecker
01:43 PM bug #7885 (Closed): registration search by name finds also typifications for this name
Andreas Kohlbecker
12:59 PM bug #7885 (In Progress): registration search by name finds also typifications for this name
Andreas Kohlbecker
01:05 PM bug #8327 (Duplicate): record with publication date is competing with curation status, set to pre...
closing as duplicate Andreas Kohlbecker
11:18 AM feature request #8342: shift field Field number
This is potentially easy to fix, thus i am setting this to HIGHEST. If it is more time consuming we should downgrade ... Andreas Kohlbecker

07/01/2019

02:45 PM feature request #6709 (Closed): Do not show UUID on media page
Andreas Kohlbecker wrote:
> e.g.: http://int.e-taxonomy.eu/dataportal/integration/reference/cdm_dataportal/media/d0b...
Patrick Plitzner
02:42 PM feature request #6709: Do not show UUID on media page
e.g.: http://int.e-taxonomy.eu/dataportal/integration/reference/cdm_dataportal/media/d0bf650c-4cc6-4dfe-bb2f-a289b426... Andreas Kohlbecker
10:45 AM feature request #6709 (Feedback): Do not show UUID on media page
Andreas Kohlbecker wrote:
> HI Patrick, is this issue about the UUID being used as replacement for missing title att...
Patrick Plitzner
01:42 PM feature request #8344 (Feedback): cdm light export: add dummy line in simpla facts table
Hallo Katja,
...
Dann etwas für den Release, wenn’s geht:
Ich verwende die SimpleFact Tabelle im weiteren Verlauf ...
Katja Luther
01:41 PM feature request #8294 (Resolved): Make display of ID in source and ID Namespace configurable
please review Katja Luther

06/28/2019

02:05 PM feature request #8320 (Closed): Links to reference page as appendend icon instead of having the w...
done Andreas Kohlbecker
02:04 PM feature request #8320 (Resolved): Links to reference page as appendend icon instead of having the...
Applied in changeset commit:cdm-dataportal|2ffe4d59b3a9ac3747f0b94a761adf3ea0f6de59. Andreas Kohlbecker
01:17 PM feature request #7620 (Resolved): RegistrationSearch implemented with Reference filter
Applied in changeset commit:cdm-dataportal|384ff2ba6f98d8d869093ff4be0fea7eb81d7a0e. Andreas Kohlbecker

06/27/2019

07:13 PM bug #8343 (Rejected): potential timezone problem in application stack
I don't think that we are having a timezone shift problem since the date is stored in the db as 2018-06-11 22:00:00. ... Andreas Kohlbecker
07:07 PM bug #8343 (Feedback): potential timezone problem in application stack
Ist denn genau definiert, um welche Zeitzone es sich handelt? Ich frage auch weil auf https://www.phycobank.org/cdm_d... Andreas Kohlbecker
07:12 PM task #8118: Update MySQL drivers
**The proper solution it the timezone problem is documented at MySqlFaq#The-server-time-zone-value-is-unrecognized** Andreas Kohlbecker
07:03 PM feature request #8245 (Resolved): Improve representation of DescriptionElementBase.timeperiod
done, for testing you can use for example http://edit.test/d7/reference_int/cdm_dataportal/taxon/c246856f-c03e-4cb7-a... Andreas Kohlbecker
05:27 PM task #7269 (Closed): Use redmine as message hub for submitter curator communication
even if it has been completely implemented this feature has been rejected afterwards Andreas Kohlbecker
05:26 PM task #7269 (Rejected): Use redmine as message hub for submitter curator communication
Andreas Kohlbecker
05:00 PM feature request #4372 (In Progress): Selenium PortalPage class also suitable for zen-basetheme
Andreas Kohlbecker
02:26 PM task #7296 (Closed): externalize redmine api key
all resources removed Andreas Kohlbecker
02:20 PM task #4177 (Resolved): display of name relationships in synonymy broken
I detached the task #5856: "[DISCUSS] Consider implementing additional name relationships" from this issue so that we... Andreas Kohlbecker
10:34 AM feature request #7408 (Feedback): [E+M] Support for preferred common names in data portal
Is this ticket still relevant. I seem to remember that the preferred common names are currently in discussion. Andreas Kohlbecker
10:25 AM bug #8050 (Closed): Create blocking registrations for un-registered names which are to be used in...
Okay, da offene Punkt auch mit Workflows zu tun hat, sollten wir den kommende Woche diskutieren. Schließe wie besproc... Wolf-Henning Kusber
09:04 AM bug #8050 (Resolved): Create blocking registrations for un-registered names which are to be used ...
Wolf-Henning Kusber wrote:
> Das Problem in !#11 und !#12:
>
> Konkret möchte ich für einen existierenden Namen, ...
Andreas Kohlbecker

06/26/2019

05:52 PM feature request #6709 (Resolved): Do not show UUID on media page
done Andreas Kohlbecker
05:11 PM feature request #6709: Do not show UUID on media page
hi Patrick, could you please answer on my question? Andreas Kohlbecker
05:51 PM feature request #6316 (Resolved): display source references of media objects in media page
done and also test implemented. Andreas Kohlbecker
04:59 PM bug #8321: Namepage shows wrong taxa as related to the name
Both Eunotia krammeri with different Author teams are not mixed anymore. The described problem is solved and the tick... Wolf-Henning Kusber
04:49 PM feature request #8342: shift field Field number
Avoid overlap with collection date fields Wolf-Henning Kusber
04:47 PM feature request #8342 (Closed): shift field Field number
see screen shot
![](picture731-1.png)
Wolf-Henning Kusber
04:33 PM feature request #8341 (New): status without scroll bar

![](picture563-1.png)
reference detail not realy needed in our project. This could be as small as possible. It w...
Wolf-Henning Kusber
03:38 PM bug #8050: Create blocking registrations for un-registered names which are to be used in nomencla...
Das Problem in !#11 und !#12:
Konkret möchte ich für einen existierenden Namen, z.B. "Micrasterias" einen (Namens-...
Wolf-Henning Kusber
01:59 PM task #5857 (Resolved): show nomenclatural status for for representations of TaxonName
Andreas Kohlbecker wrote:
> we (Andreas & Henning) decided to move the footnote in front of the relationship label d...
Andreas Kohlbecker
12:48 PM bug #8340 (New): is accepted for Footnotes missing and with wrong index
The option "Display is accepted for ... on taxon pages when coming from a synonym link." needs to be turned on for th... Andreas Kohlbecker

06/25/2019

05:41 PM feature request #8304: Name page redirects to according taxon depending on query parameter
The layout settings page () now offers the following checkbox:
![](picture689-1.png)
Andreas Kohlbecker
04:47 PM feature request #8304: Name page redirects to according taxon depending on query parameter
The suggestion made in the issue description to use the name render templates to fine tune the behavior of the autore... Andreas Kohlbecker
03:47 PM feature request #8304: Name page redirects to according taxon depending on query parameter
Hallo,

ich bemerke gerade eine Veränderung in der Anzeige von Homonymbeziehungen:

Wenn ich in http://cichori...
Andreas Kohlbecker
01:28 PM feature request #8339 (New): Completely remove the potentially redundant 'acceptedFor' parameter ...
'acceptedFor' parameter which is used by the synonym page can potentially be replaced or removed.
this parameter i...
Andreas Kohlbecker
11:18 AM bug #8338 (New): Newly created structural modifier terms are not available in details view
steps to reproduce
1. Create a character in the character editor
1. Look at the available "Structural Modifiers" ...
Patrick Plitzner

06/24/2019

11:35 AM bug #8337 (Worksforme): internal error, name type status missing, reference in name type not updated
In the normal workflow a prelininary reference title was databased, than a new genus, a new species, than a name type... Wolf-Henning Kusber
 

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