Activity
From 06/17/2019 to 07/16/2019
07/16/2019
- 07:58 PM feature request #8339: Completely remove the potentially redundant 'acceptedFor' parameter from synonym page
- OK, now I at least understand what it is used for. However, I doubt (but am not sure) that this is still needed. Mayb...
- 06:57 PM feature request #8306: Registration page links to registered taxon name
- fine, ticket can be closed.
- 06:54 PM feature request #7966: Registration search simplify type select options
- Lectotype gives back: Specimen types AND Name types of genera, species and below = correct
Problem fully resolved.... - 06:45 PM feature request #7966: Registration search simplify type select options
- Original designation gives back: Name types of genera = correct
Holotype gives back: Specimen types of species and b... - 06:29 PM task #8209: use ellypsed references for all reference comboboxes
- Again there are extremely long entries. The breadth of the dropdown box differs extremly.
 - 06:18 PM bug #8365: DerivedUnitFacadeCacheStrategy should remove collection codes from accession numbers
- Quote
"OK, parentheses are removed again."
The brackets are reinstated not removed but should be removed, see S... - 12:08 PM bug #8365 (Resolved): DerivedUnitFacadeCacheStrategy should remove collection codes from accession numbers
- OK, parentheses are removed again.
- 06:11 PM feature request #8284: starting a registration for an existing name causes the name editor to pop up in read only mode
- Info for Genera without reference:
The chosen name needs to be completed before it can be used. Please add the nome... - 06:09 PM bug #7187 (Closed): ReferenceEditor: saving with DOI casues exception
- 05:46 PM bug #7187: ReferenceEditor: saving with DOI casues exception
- Review fehlte. Feature seit Monaten ohne Beanstandung im Routinebetrieb der Release Version. Ticket kann geschlossen ...
- 06:00 PM bug #7845: NamePopupEditor new Genus button should clear the genus name field in the new editor
- new error: #8374
- 05:56 PM bug #7845: NamePopupEditor new Genus button should clear the genus name field in the new editor
- Ticket can be closed, but "Save" error when an uninominal should be saved.
- 06:00 PM bug #8374 (Duplicate): Save genus generated for a species with a different reference
- Test system:
New species entered. Genus not in list.
Input "new" genus with reference entered. Saving result in a... - 05:56 PM bug #7885 (Worksforme): registration search by name finds also typifications for this name
- this is now obviously working:
http://test.e-taxonomy.eu/dataportal/preview/phycobank/cdm_dataportal/registration-... - 05:51 PM feature request #8294 (Feedback): Make display of ID in source and ID Namespace configurable
- Patrick, can you try to fix the open issues?
- 05:47 PM feature request #8294: Make display of ID in source and ID Namespace configurable
- yes, it is switched and also in both views it is called "ID in Namespace" but should be "ID Namespace". Also ID Names...
- 05:38 PM feature request #6709 (Closed): Do not show UUID on media page
And now to your last question:
> By the way, why have we removed the possibility to show multiple representation...- 05:35 PM feature request #6709: Do not show UUID on media page
- Andreas Müller wrote:
> By the way, is there a reason why we show the file name below image? Sometimes it is very ug... - 05:30 PM feature request #6709: Do not show UUID on media page
- Andreas Müller wrote:
> Andreas Kohlbecker wrote:
> > e.g.: http://int.e-taxonomy.eu/dataportal/integration/referen... - 02:41 PM feature request #6709 (Feedback): Do not show UUID on media page
- Feel free to create new tickets from the above questions.
- 02:41 PM feature request #6709: Do not show UUID on media page
- Connected with the representation is the question which filename to use different representations have different file...
- 02:39 PM feature request #6709: Do not show UUID on media page
- By the way, why have we removed the possibility to show multiple representations on the media page? It would be nice ...
- 02:35 PM feature request #6709: Do not show UUID on media page
- By the way, is there a reason why we show the file name below image? Sometimes it is very ugly like in the above ment...
- 02:14 PM feature request #6709: Do not show UUID on media page
- Andreas Kohlbecker wrote:
> e.g.: http://int.e-taxonomy.eu/dataportal/integration/reference/cdm_dataportal/media/d0b... - 05:34 PM feature request #8373 (New): media page: avoid showing ugly file names as title replacement
By the way, is there a reason why we show the file name below image? Sometimes it is very ugly like in the above me...- 05:29 PM feature request #8372 (New): media page: show media type in the page title
- distinguish the different media types an to adapt the title accordingly: Instead of "Media ...", "Image ...", "Video ...
- 05:23 PM bug #8340 (Feedback): is accepted for Footnotes missing and with wrong index
- 05:23 PM bug #8340: is accepted for Footnotes missing and with wrong index
- Andreas Müller wrote:
> I do not really understand the problem. On http://test.e-taxonomy.eu/dataportal/preview/cich... - 02:07 PM bug #8340: is accepted for Footnotes missing and with wrong index
- I do not really understand the problem. On http://test.e-taxonomy.eu/dataportal/preview/cichorieae/cdm_dataportal/tax...
- 05:22 PM bug #8260 (Feedback): Details and Supplemental Data View do not save the expansion state of sections
- Now, nomenclatural reference is never expanded. Maybe it was like this before already and I simply did not recognize.
- 05:15 PM feature request #8283 (Feedback): Allow adding media to terms in taxeditor
- Patrick Plitzner wrote:
> Andreas Müller wrote:
> > The data may got lost the following way.
> >
> > * Open term... - 05:13 PM feature request #6316 (Closed): display source references of media objects in media page
- using ; as separator for multiple sources: commit:cdm-dataportal|c021779a
- 02:55 PM feature request #6316 (Feedback): display source references of media objects in media page
- Generally this works. Only we should replace "," by ";" as separator for multiple sources. The former is often part o...
- 05:07 PM Revision c021779a (cdm-dataportal): ref #6316 using ; as separator for multiple sources
- 05:03 PM feature request #8245: Improve representation of DescriptionElementBase.timeperiod
- here it is: http://int.e-taxonomy.eu/dataportal/integration/reference/cdm_dataportal/taxon/c246856f-c03e-4cb7-ac92-d9...
- 02:59 PM feature request #8245: Improve representation of DescriptionElementBase.timeperiod
- Andreas Kohlbecker wrote:
> done, for testing you can use for example http://edit.test/d7/reference_int/cdm_dataport... - 05:02 PM bug #8371 (New): When creating a new term for a vocabulary the term should have the focus afterwards
- ... maybe even better, the focus should go to the details view label field to allow immediately enter the label for t...
- 05:02 PM bug #8343: potential timezone problem in application stack
- Andreas Müller wrote:
> I don't understand why this is rejected. The problem still exists as you can see in the abov... - 04:47 PM bug #8343: potential timezone problem in application stack
- Andreas Müller wrote:
> Andreas Kohlbecker wrote:
> > Maybe this is an issue which comes from the time when the tim... - 03:18 PM bug #8343: potential timezone problem in application stack
- Andreas Kohlbecker wrote:
> Maybe this is an issue which comes from the time when the timezone data was not correctl... - 03:16 PM bug #8343 (Feedback): potential timezone problem in application stack
- I don't understand why this is rejected. The problem still exists as you can see in the above link. It might not be a...
- 04:47 PM bug #8129: Load images asynchronously in media details view
- Also we may want to have a replacement image which shows "loading" or something similar while the image is loading. A...
- 04:44 PM bug #8129 (Feedback): Load images asynchronously in media details view
- It seems to work only in the simple view but not in the advanced view.
As an example use rem_conf_am, bulk editor ... - 04:44 PM bug #8370: feature blocks created by compose_description_element_individuals_association() are broken
- Andreas Müller wrote:
> I think you accidentaly changed back to status "new"
thanx for fixing this Andreas.
@K... - 04:08 PM bug #8370 (Resolved): feature blocks created by compose_description_element_individuals_association() are broken
- I think you accidentaly changed back to status "new"
- 04:04 PM bug #8370 (New): feature blocks created by compose_description_element_individuals_association() are broken
- this bug has been introduced with commit:cdm-dataportal|e89c1115
- 04:03 PM bug #8370 (Resolved): feature blocks created by compose_description_element_individuals_association() are broken
- Applied in changeset commit:cdm-dataportal|43d01429e6dbd2d56970902ad525376f00b699b1.
- 04:00 PM bug #8370 (Closed): feature blocks created by compose_description_element_individuals_association() are broken
- For example Achnanthidium exiguum (Grunow) Czarn. in Algaterra shows multiple errors in the error box:
~~~
Warnin... - 04:09 PM Revision 0a59879e (cdm-dataportal): renaming confusing render array key from 'markup' to 'specimen_table'
- 04:03 PM Revision 43d01429 (cdm-dataportal): fix #8370 fixing bug introduced in e89c1115
- 03:20 PM feature request #8320 (Resolved): Links to reference page as appendend icon instead of having the whole citation as link
- 03:17 PM bug #8369 (Closed): SpecimenTypeDesignationDTO can not be serialized to JSON
- 02:19 PM bug #8369 (Closed): SpecimenTypeDesignationDTO can not be serialized to JSON
- SpecimenTypeDesignationDTO is missing getters and setters and thus can not be serialized
- 03:16 PM Revision c45d681a (cdmlib): ref #8369 SpecimenTypeDesignationDTO: adding missing getters and basing on TypedEntityReference
- 03:15 PM bug #8368 (Feedback): problems in compose_cdm_specimen_or_observation_tree_entry()
- Katja, please help disentangling the situation.
- 03:13 PM bug #8368: problems in compose_cdm_specimen_or_observation_tree_entry()
- After fixing the problems in this code i noticed that this code is not generating any output at all.
I attempted t... - 02:19 PM bug #8368: problems in compose_cdm_specimen_or_observation_tree_entry()
- working on this issue I found another issue: #8369
- 02:18 PM bug #8368 (In Progress): problems in compose_cdm_specimen_or_observation_tree_entry()
- 12:10 PM bug #8368 (Closed): problems in compose_cdm_specimen_or_observation_tree_entry()
- Hallo Katja,
ich leite das mal an dich weiter, denn es gibt hier ein Problem mit deinem Kode in compose_cdm_speci... - 03:14 PM Revision 6abd581c (cdm-dataportal): typo
- 03:14 PM Revision 0557d51a (cdm-dataportal): ref #8368 fixing check for exitance of property
- 03:14 PM task #8118: Update MySQL drivers
- Andreas Kohlbecker wrote:
> **The proper solution it the timezone problem is documented at MySqlFaq#The-server-time-... - 01:44 PM Revision aa6598d8 (cdm-dataportal): avoiding php warnings due to missing
- 01:36 PM Revision 13581ffc (cdmlib): ref #8365 removing parentheses from code + accession number - again, adapting test
- 01:32 PM Revision f2b0e412 (cdmlib): ignoring just the test() method in TaxonRelationshipsDTOTest
- 12:48 PM feature request #7791 (Closed): Visualize the phycobank higher taxon graph
- No improvements are needed by now
- 12:47 PM bug #8321 (Closed): Namepage shows wrong taxa as related to the name
- Wolf-Henning Kusber wrote:
> Both Eunotia krammeri with different Author teams are not mixed anymore. The described ... - 12:41 PM bug #8278 (Closed): LazyInitializationException (LIE) in ReferenceEllypsisCaptionGenerator
- closing, since this problem no longer occurred.
- 12:13 PM feature request #8366 (Closed): Same typedesignation display for registration page as in name page
- 12:09 PM feature request #8357 (Closed): implement client adapter for diatom base
- 12:07 PM Revision 12516e6b (cdmlib): ref #8365 removing parentheses from code + accession number - again
- 11:30 AM Revision 8f919bc0 (utis-core): attempt to create a 1.0 version of utis which is not causing a masssive startup delay - not usable yet
- 11:28 AM Revision c121ad4a (utis-webapp): using utis-core 1.2.1-SNAPHOT, but this combination is causing problems on the server
07/15/2019
- 04:30 PM bug #8233: [Follow up] Creating type duplicates
- Move to next milestone for 5.8 release
- 04:29 PM Revision 6f1e2526 (taxeditor): ref #8129 Fix refresh bug when adding a new empty media to a term
- 04:14 PM bug #8225: Deleting one of two type designations removes both
- Move to next milestone to implement a better solution than the temporary fix.
- 04:02 PM feature request #6849: [DISCUSS] How to handle "kind of" term creation in TermEditor
- Moving to next milestone for further discussion
- 03:58 PM feature request #8135 (Feedback): Implement verbatim type information in TaxEditor
- @Andreas: There was something Walter wanted but I can't remember what it was. Depending on that we may close this tic...
- 03:45 PM Revision f19b887f (utis-core): limiting GBIFBackboneClient to 1000 subchecklists
- 03:27 PM task #8130: Check if related feature data is cleared when supported facts type is changed
- Move to next milestone for remaining discussion
- 03:26 PM feature request #8044: Add "Move to..." menu to term editor
- Move to next milestone because this is still considered experimental
- 03:25 PM feature request #8248: Implement OWL import
- Move to next milestone because this is still considered experimental
- 03:24 PM feature request #6774: Implement OWL export
- Move to next milestone because this is still considered experimental
- 03:23 PM feature request #8335 (Resolved): Store character matrix table state as DB preference
- 03:22 PM feature request #8335: Store character matrix table state as DB preference
- Move to next milestone because the character matrix is still considered experimental
- 03:20 PM feature request #8242: Implement filtered combo boxes for state selection in CharacterMatrix
- Move to next milestone because this is still considered experimental
- 03:19 PM feature request #8294: Make display of ID in source and ID Namespace configurable
- Tested on nightly: The admin and local preferences work as expected BUT they seem to be swapped. Also the one prefere...
- 02:36 PM feature request #8283: Allow adding media to terms in taxeditor
- Added #8367 for remaining issues and discussion
All the rest should be implemented and functional now - 02:34 PM bug #8367 (New): Advanced media view is not available for media not edited in media details view
- Copied from #8283:
"With the current implementation it is not possible to switch between advanced and simple view bu... - 02:29 PM feature request #8286 (Closed): Add cm as unit term to CDM
- Testes and already used in additivity_ontology on test server.
- 02:22 PM feature request #8351 (Closed): name page: show type designations with map
- 02:12 PM Revision 556458d0 (utis-core): removing obsolte % from like match mode query
- 01:57 PM Revision 1461f4eb (utis-webapp): ref #8357 adding DiatomBaseClient to the index.html
- 01:55 PM task #8363 (In Progress): PESI SOAP service seems to return duplicate records
- I send an email to Bart ....
- 01:17 PM task #8363: PESI SOAP service seems to return duplicate records
- As the uuid seems to be the same I don't think we have data duplicates
- 01:16 PM task #8363: PESI SOAP service seems to return duplicate records
- If you are sure that this is not a data or data submission issue, I will delegate this problem to Bart Vanhoorn.
- 01:10 PM task #8363: PESI SOAP service seems to return duplicate records
- Why did you assign this to me. As it does not seem to be data issue but a service issue I can't see what I can do.
- 12:58 PM task #8363: PESI SOAP service seems to return duplicate records
- The search for "Crepis foetida%" (`http --timeout 600 https://cybertaxonomy.eu/eu-bon/utis/1.3/search 'providers==pes...
- 12:12 PM task #8363: PESI SOAP service seems to return duplicate records
- can you say which data is duplicated?
Does it appear as duplicate in the eu-nomen portal as well? - 01:25 PM Revision d1895dbe (utis-webapp): ref #8357 activating DiatomBaseClient in UTIS controller
- 01:24 PM Revision bed1d4af (utis-core): ref #8357 implementing DiatomBaseClient on base of the WoRMS client
- 12:38 PM Revision a2dbd247 (utis-core): bumping version to 1.2.3
- 11:25 AM feature request #6238: add name of sec reference to display of concept relations in portal and a little header
- Hi Gabi,
ich habe gerade dieses Ticket hier gefunden - ist erledigt.
Kannst du mal gucken ob das jetzt soweit O...
07/13/2019
- 06:11 PM feature request #8366: Same typedesignation display for registration page as in name page
- Image position and type positions are fine. The source interrupt the reading but is an important reference.
: ref #8366 adapting tests to full typedesignation display with map in registration page
- 08:34 PM Revision 6e686cc7 (cdmlib): Revert "ignoring TaxonRelationshipsDTOTest"
- This reverts commit 18b443282498e7bdbccadf14a861f6b474825297.
- 08:25 PM feature request #8366: Same typedesignation display for registration page as in name page
- Wolf-Henning Kusber wrote:
> No review, may be I was to fast:
> http://test.e-taxonomy.eu/dataportal/preview/phyco... - 07:29 PM feature request #8366: Same typedesignation display for registration page as in name page
- Name page okay: http://test.e-taxonomy.eu/dataportal/preview/phycobank/cdm_dataportal/name/8ad8bc6d-b413-4af1-8876-fb...
- 07:28 PM feature request #8366: Same typedesignation display for registration page as in name page
- No review, may be I was to fast:
http://test.e-taxonomy.eu/dataportal/preview/phycobank/cdm_dataportal/registration... - 05:11 PM feature request #8366: Same typedesignation display for registration page as in name page
- please review
- 05:10 PM feature request #8366 (Resolved): Same typedesignation display for registration page as in name page
- Applied in changeset commit:cdm-dataportal|41a348be0fd4782a984dd5f4e65069d7c7cb99f4.
- 03:42 PM feature request #8366 (Closed): Same typedesignation display for registration page as in name page
- The registration page should display the typedesignation in the same ways as in the name page.
A map should also be ... - 07:15 PM bug #8365: DerivedUnitFacadeCacheStrategy should remove collection codes from accession numbers
- Reviewing the screen shot:
First representation: Lectotype (reference) gathering(Code accession number)
Second repr... - 11:59 AM bug #8365 (Feedback): DerivedUnitFacadeCacheStrategy should remove collection codes from accession numbers
- I removed the parentheses but these now causes inconsistent display:
What do you think He... - 06:45 PM Revision 18b44328 (cdmlib): ignoring TaxonRelationshipsDTOTest
- 06:20 PM Revision deb2fc24 (cdm-dataportal): ref #8108 adding missing footnotes to name page
- 05:47 PM Revision b8a0efb3 (cdm-dataportal): grouping and doumenting ws calls
- 05:33 PM Revision 28702a86 (cdmlib): implemting TypeDesignationPortalController
- 05:32 PM Revision 35a38115 (cdmlib): ref #8365 putting parentheses back
- 05:26 PM Revision d8b10f90 (cdm-dataportal): ref #8366 fixing bug
- 05:23 PM Revision b9fcde0c (cdm-dataportal): ref #8366 adapting tests to full typedesignation display with map in registration page
- 05:10 PM Revision 41a348be (cdm-dataportal): fix #8366 full typedesignation display with map in registration page
- 04:00 PM Revision a9a04561 (cdm-dataportal): ref #8366 refactoring typedesignation and map functions
- 02:44 PM Revision 3000a28d (cdmlib): ref #8365 stripping collection code from accession number only if followed by whitespace
- 12:01 PM feature request #8357 (In Progress): implement client adapter for diatom base
- 12:01 PM feature request #8357: implement client adapter for diatom base
- Bart Vanhoorne wote:
diatombase.org (and all other subregisters in WoRMS/Aphia http://www.marinespecies.org/subre... - 07:29 AM Revision 7fa459c8 (cdmlib): ref #8283 Fix possible NPE when no media is attached to term
- 07:28 AM Revision 1ab658e8 (taxeditor): ref #8011, #8129 Fix possible NPEs when media URI can not be resolved
07/11/2019
- 06:50 PM Revision 78ddfbeb (taxeditor): ref #8011 Show term media
- 06:11 PM Revision a9b9edad (cdmlib): ref #8365 removing parentheses from code + accession number
- 06:04 PM bug #8365 (Resolved): DerivedUnitFacadeCacheStrategy should remove collection codes from accession numbers
- We should also consider removing the parentheses from the accession number since this seems to be useless in most sit...
- 06:00 PM bug #8365 (Closed): DerivedUnitFacadeCacheStrategy should remove collection codes from accession numbers
- Users frequently enter the collection code with the accession number which can cause to code to appear duplicated in ...
- 06:02 PM Revision f1248e50 (cdmlib): ref #8365 stripping collection code from accession number in DerivedUnitFacadeCacheStrategy
- 06:02 PM Revision 4aa385eb (cdmlib): avoiding NPE
- 05:30 PM Revision 4f7a5ec7 (cdm-dataportal): avoiding undefined property notice
- 04:41 PM bug #6151: implement pager for search service
- Email sent to Scott Chamberlain
- 04:28 PM bug #6151 (Resolved): implement pager for search service
- 04:24 PM bug #8364 (Closed): ext-links module: problems
- Hallo,
wo wir gerade vom Portal reden...
Ich habe mal den External links – sidebar getestet (bei den Cactaceae, O... - 03:29 PM Revision c7a4af2c (utis-webapp): doc on log file places
- 03:10 PM Revision 971fab73 (utis-webapp): impoving text on index.html
- 03:07 PM Revision 039b1a7b (utis-webapp): deleting obsolte GBIFBetaBackboneClient
- 03:06 PM Revision 286229be (utis-webapp): updating documentation on available checklists:
- - adding Phycobank
- adding default GBIF checklists - 03:05 PM Revision 1c6357ca (utis-core): deleting obsolte GBIFBetaBackboneClient
- 02:59 PM Revision c68ea3cc (utis-core): exteding and cleaning the default checklists for the GBIF client
- 02:52 PM Revision 62a27c8f (utis-core): deleting obsolte GBIFBetaBackboneClient
- 02:39 PM task #8363: PESI SOAP service seems to return duplicate records
- Hi Anderas, I added you to this ticket as watcher since this could be an issue wit the data delivery to VLIZ
- 02:36 PM task #8363 (Worksforme): PESI SOAP service seems to return duplicate records
- see
~~~
http --timeout 600 :8081/search 'providers==pesi' 'query==Crepis foetida' searchMode==scientificNameLike... - 02:35 PM Revision 2e351aa3 (utis-core): ref #6151 implementing pager in GBIF client and fixing problems with like search
- 02:33 PM feature request #6213 (Resolved): use separate tempfolder per store updater
- 02:23 PM bug #8129: Load images asynchronously in media details view
- > This also holds for the image gallery view if "show thumbnails" is switched on (but hopefully there only thumbnail ...
- 02:19 PM bug #8129 (Resolved): Load images asynchronously in media details view
- 02:18 PM Revision ccf1adbd (taxeditor): ref #8129 i18n
- 02:08 PM Revision 47c992a7 (taxeditor): ref #8129 Fix image disposing
- - refactoring
- 01:06 PM Revision c5ce9799 (utis-webapp): ref #8362 alowing to specify new unknown sub checklists
- 01:04 PM feature request #8362 (Closed): GBIFBackboneClient offers too vast amount of subchecklists
- 01:03 PM Revision a70f009c (utis-core): ref #8362 limiting detault set of gbif sub checklists and thus spedding up startup time
- - also implementing like search
- 12:48 PM Revision ca1b4808 (taxeditor): ref #8129 Load images asynchronously in media details view
- 08:09 AM Revision 8b2071a3 (cdmlib): ref #8283 Add media uuids to term dto
- - fix HQL response handling for left outer joins
- 08:07 AM Revision f3b620c8 (utis-core): store updater thread wirth minimus priority
07/10/2019
- 11:12 PM feature request #8362 (Closed): GBIFBackboneClient offers too vast amount of subchecklists
- The GBIFBackboneClient fetches all 45400 sub checklists. This makes the capabilities response extremely unusable and ...
- 10:10 PM Revision 0470eeac (utis-webapp): better log folder detection
- 10:09 PM Revision f92a98aa (utis-core): ref #6213 separate tempfolder per store updater - creating missing tmp folder
- 06:20 PM Revision c70386c0 (utis-core): ref #6213 separate tempfolder per store updater
- 06:20 PM Revision 84ee3f65 (utis-webapp): better logfile names
- 06:19 PM Revision a3528828 (utis-webapp): removing logfiles
- 06:19 PM Revision 2f86c850 (utis-webapp): removing logfiles
- 05:50 PM Revision 9d3d4e28 (utis-webapp): webapp context specific logfiles and logging of web requests
- 05:48 PM Revision 2f0b034a (utis-core): modernizing logging -> log4j2
- 03:08 PM Revision 1d603ffa (utis-webapp): reenabling RollingFile Logger (/var/log/jetty8/utis.log)
- 03:06 PM Revision 03b34296 (utis-core): ref #6151 paging of scientificNameLike and vernacularNameLike search modes in Phycobank client by basing on new common abstract cdm server client which is now also used for the BgbmEditClient
- 12:46 PM Revision 044553f6 (utis-core): ref #6151 paging of scientificNameLike and vernacularNameLike search modes in BgbmEditClient client
- 08:51 AM Revision 1a1fb1f0 (utis-core): ref #6151 paging of scientificNameLike and vernacularNameLike search modes in PLAZI client
- 08:44 AM Revision 54c8f6e1 (utis-core): ref #6151 paging of scientificNameLike and vernacularNameLike search modes in EUNIS client
07/09/2019
- 11:16 PM bug #6151: implement pager for search service
- the paging mechanism for the WoRMS and PESI clients is implemented.
The PESI SOAP service however seems to return ... - 11:13 PM Revision 6fd7dc60 (utis-core): ref #6151 paging of scientificNameLike and vernacularNameLike search modes in PESI client
- 10:48 PM feature request #8360 (Worksforme): paging results of /classification/{taxonId}/children webservice
- The WoRMS and PESI webservices only return the first 50 taxa. It is needed to use the offset parameter to obtain all ...
- 10:44 PM Revision 8edd1056 (utis-core): ref #6151 paging of scientificNameLike and vernacularNameLike search modes in WoRMS client
- 05:31 PM Revision 236f847c (utis-webapp): ref #6151 pager parameters in UtisController - 2
- 05:30 PM Revision 11ca8ad3 (utis-core): ref #6151 pager parameters TnrMsg
- 05:24 PM Revision a6d66952 (utis-webapp): ref #6151 pager parameters in UtisController
- 05:03 PM Revision e34c2dfb (utis-core): ref #6151 updating PESIClient to latest SOAP api
- 04:37 PM task #8359 (Closed): Update WoRMS client adapter
- 01:56 PM task #8359 (Resolved): Update WoRMS client adapter
- Applied in changeset commit:utis-core|f9e3e79e7fd8009ed3c8353d032b028086321f34.
- 01:52 PM task #8359 (Closed): Update WoRMS client adapter
- The SOAP API of Aphia has changed
- 04:31 PM Revision 26759d99 (utis-core): ref #8357 initial steps in implementing DiatomBase as subServiceProvider in the WoRMS client
- 01:52 PM Revision f9e3e79e (utis-core): fix #8359 updating the WoRMS client adapter and fixing a couple of problems
- 12:07 PM Revision 2b66b2b7 (utis-core): better loggin in Neo4jStoreUpdater
- 12:07 PM Revision 1a5bb017 (utis-core): better loggin in GBIFBackboneClient
- 12:00 PM feature request #8357: implement client adapter for diatom base
- Diatom base is fully integrated into WoRMS served throgh the same system.
The search form for DiatomBase uses in t... - 11:42 AM Revision 8bf3f34e (utis-webapp): fixing excludedClients startup option
- 11:22 AM feature request #8356 (In Progress): Algae Names Index - implementation
- 11:12 AM feature request #8358 (Duplicate): Show name type only if rank is higher than species
- 10:44 AM feature request #8358: Show name type only if rank is higher than species
- this seems like duplicate of #7690
- 10:39 AM feature request #8358 (Duplicate): Show name type only if rank is higher than species
- Show name type only if rank is higher than species in Vaadin.
This might enhance usability of the type section for... - 09:18 AM Revision ccf7d82c (utis-webapp): introducing dev mode system properties and documentation
- 09:17 AM Revision 48c3d118 (utis-core): renaming dev mode system property 'skipStoreUpdating'
- 09:16 AM Revision df93a7b0 (utis-core): ref #8355 switching PhycobanlClient to production server
- 08:56 AM feature request #8355 (Resolved): implement client adapter for phycobank
- Applied in changeset commit:utis-core|ad30a5f15e02eab30f50c2f9c598860ab822d6d5.
- 08:55 AM Revision ad30a5f1 (utis-core): fix #8355 implementing phycobank client adapter
07/08/2019
- 03:45 PM feature request #8357 (Closed): implement client adapter for diatom base
- example requests:
~~~
http --timeout 600 :8081/search 'providers==worms[diatombase]' 'query==Eunotia can' searchM... - 03:42 PM feature request #8356 (In Progress): Algae Names Index - implementation
- In contrast to the original concept considerations for an index (#6184), we have chosen a more straight forward solut...
- 03:34 PM feature request #8355 (Closed): implement client adapter for phycobank
- example requests:
* http :8081/search providers==bgbm-phycobank\[phycobank\] 'query==Navicula*' searchMode==scient... - 03:14 PM Revision b0cdc514 (cdm-dataportal): initializing variable
- 03:05 PM Revision 40360e37 (cdm-dataportal): adapting tests to modified portal code
- 02:10 PM Revision 25201777 (cdm-dataportal): ref #8320 fixing buggy implementation of icon links to references in theme function
- 02:08 PM Revision 5f188298 (cdm-dataportal): ref #6380 proper de-duplication of type designations
- 01:00 PM feature request #8352 (Closed): name page: show nomenclatorical acts
- Yes, closed now.
- 12:05 PM feature request #8352: name page: show nomenclatorical acts
- So we can close this ticket?
- 12:55 PM feature request #8351: name page: show type designations with map
- The map is now being suppressed if there are no points to show,
- 12:53 PM Revision 25f440dc (cdm-dataportal): ref #8351 supressing specimen map in case of no location points
- 12:04 PM feature request #8354 (Closed): taxonomic registration search by name finds also typifications for this name
- 11:17 AM feature request #8354: taxonomic registration search by name finds also typifications for this name
- Name types for genera can be found by entering the name (fake entry for "Phacus"). Ticket might be closed (but see Pl...
- 11:02 AM task #8201: test all delete functionality in the RegistrationUI
- Wolf-Henning Kusber wrote:
> Article not linked to any registration can be deleted without problem.
... but is no... - 10:50 AM task #8201: test all delete functionality in the RegistrationUI
- Delete button is available for references with registrations. Trying to delete (which realy does not any sense) produ...
- 10:43 AM task #8201: test all delete functionality in the RegistrationUI
- Article not linked to any registration can be deleted without problem.
- 10:36 AM task #8201: test all delete functionality in the RegistrationUI
- Saved specimen type in Registration (preparation): full functionality.
Saved name specimen type in Registration (pre...
07/05/2019
- 11:04 PM Revision f9e8f532 (cdmlib): minor in cdm light export
- 10:14 PM Revision c0babef0 (cdmlib): revert condensed distribution string and some performance issues in cdm light
- 08:19 PM feature request #8352: name page: show nomenclatorical acts
- Example for checking (including data cleaning issues to be solved by whk):
Achnanthes austriaca
name is not regis... - 12:00 AM feature request #8352: name page: show nomenclatorical acts
- please review
- 07:58 PM feature request #8354: taxonomic registration search by name finds also typifications for this name
- Lectotypes/Epitypes of names are found by th name. Issue solved.
For name types of rank=genus and higher no data a... - 12:02 AM feature request #8354 (Resolved): taxonomic registration search by name finds also typifications for this name
- done. please review
- 07:33 PM feature request #8351: name page: show type designations with map
- Sorry, an issue for georeferences not entered. Please see:
Eunotia tauntoniensis Hust. Type: United States of Americ... - 11:57 AM feature request #8351: name page: show type designations with map
- Works fine, ticket can be closed.
- 12:02 AM feature request #8351: name page: show type designations with map
- please review
- 02:08 PM Revision 0a7237ca (cdmlib): add condensed distribution string to cdm light export
- 02:06 PM Revision a0e2b61c (cdmlib): Merge branch 'develop' of ssh://dev.e-taxonomy.eu/var/git/cdmlib into develop
- 02:05 PM Revision 068072a1 (cdmlib): smaller changes in abcd import
- 11:09 AM Revision d1efd1c1 (cdmlib): ref #8248, #6774 Add top level term evaluation to test
- 09:15 AM Revision f61ab127 (cdmlib): fix dummy line in cdmlight export simple facts table
- 12:24 AM Revision d1b223ad (cdmlib): addinional RegistrationService test and a bit of cleaning up
07/04/2019
- 10:40 PM Revision 0fb7c9e1 (cdmlib): ref #8352 controller and service to find registrations by name
- 10:40 PM Revision 54e11d53 (cdmlib): ref #8354 implenting registration serch by taxonUUIDs which also covers typedesignations
- 10:40 PM Revision 5c530881 (cdmlib): RestrictionConverter converts uuid strings to UUID objetcs which have beed passed as json value
- 10:40 PM Revision 60ef4839 (cdmlib): cleaning up controller code
- 10:39 PM feature request #8352 (Resolved): name page: show nomenclatorical acts
- Applied in changeset commit:cdm-dataportal|efff6ee1db489abd192b1193e652f25978fc2441.
- 07:06 PM feature request #8352 (Closed): name page: show nomenclatorical acts
- show Registrations on the name page
- 10:39 PM feature request #8351 (Resolved): name page: show type designations with map
- Applied in changeset commit:cdm-dataportal|14076b88ce598053035a48076f0a8f0af5c99cd3.
- 06:59 PM feature request #8351 (Closed): name page: show type designations with map
- show the name type and specimen type designations on the name page. In case the type specimens are having location da...
- 10:38 PM Revision efff6ee1 (cdm-dataportal): fix #8352 name page showing registrations
- 09:17 PM feature request #8354 (Closed): taxonomic registration search by name finds also typifications for this name
- The search for Registrations via the classification graph misses finding registrations with are only associated with ...
- 07:18 PM bug #8353 (New): nomenclatural and bibliographic in-reference displayed
- The nomenclatural author team is suplemented by the bibliographical author team, this is misleading.
Example: http... - 07:01 PM Revision 14076b88 (cdm-dataportal): fix #8351 showing type designations and map in name page
- 06:20 PM Revision 94a882ee (cdm-dataportal): ref #6380 fixing regression
- 05:40 PM Revision 84673358 (cdmlib): ref #8248, #6774 Adapt tests
- 05:39 PM Revision 016e854b (cdmlib): ref #6774 Export reference uuid
- 03:18 PM feature request #8256 (In Progress): Show all status preferences as table
- there is a table of all area specific status preferences on the admin distribution preference page. It is possible to...
- 03:14 PM Revision 198c9340 (taxeditor): ref #8256: add table of all status preferences in preference page
- 02:18 PM Revision d4e4df3f (cdmlib): ref #8248 Check for existing media and references
- 02:11 PM bug #6380: typedesignations missing in homotypic group
- please review, e.g. at the example of http://test.e-taxonomy.eu/dataportal/preview/cichorieae/cdm_dataportal/taxon/a6...
- 02:09 PM bug #6380 (Resolved): typedesignations missing in homotypic group
- Applied in changeset commit:cdm-dataportal|b059b449f976cd7e198a3e21c05e38fb038ba1eb.
- 02:09 PM Revision b059b449 (cdm-dataportal): fix #6380 collecting all type designations of the whole synonymy group
- 01:43 PM Revision 98dab2ca (taxeditor): Merge branch 'hotfix/5.7.4'
- 01:29 PM Revision 4059e0ea (cdmlib): ref #8248, #6774 Fix order of term import
- - add top level term property to import/export
- 01:29 PM Revision 81198ab4 (cdmlib): ref #8248 Fix possible NPE
- 01:29 PM Revision 71e60ad9 (cdmlib): ref #6774 Move recursive model export to util class
- 01:27 PM Revision a63ffc14 (cdmlib): adding AnnotationType to getEmptyDefinedTermBase()
- 01:17 PM bug #8349 (Closed): NPE in ParseHandler when parsing name without nomencl reference
- Tested local hotfix branch. Created a new taxon and, in the name editor, added and edited misapplications and synonym...
- 11:55 AM bug #8349 (Resolved): NPE in ParseHandler when parsing name without nomencl reference
- please review, we need an hotfix because this error is always thrown if someone wants to create a new name without th...
- 11:51 AM bug #8349 (Closed): NPE in ParseHandler when parsing name without nomencl reference
- when parsing name without nomenclatural reference the following NPE is thrown:
~~~ text
Caused by: java.lang.Null... - 12:23 PM feature request #8283 (Resolved): Allow adding media to terms in taxeditor
- this seems to work now. (the details view is still empty when changing to referencing objects view, but adding the me...
- 12:06 PM Revision 76c739e8 (taxeditor): fix NPE in ParseHandler
- 12:01 PM bug #8347 (Closed): point map zooms to wrong area when using sphericalMercator maps like OpenTopo OSM etc.
- 09:50 AM bug #8347: point map zooms to wrong area when using sphericalMercator maps like OpenTopo OSM etc.
- The isohypse is very helpfull.
Just a minor issue remaining, when trying to zoom into Berlin this is easy and fast... - 12:01 PM feature request #8350 (Closed): Search dialog for named areas should work with abbreviations
- The search dialog for named areas should be configurable whether the seach should be over the label, or one of the ab...
- 11:48 AM Revision 9ce386b8 (taxeditor): fix NPE in ParseHandler
- 11:34 AM feature request #8346 (Closed): Curators and admins can edit arbitrary Annotations (Notes)
- Selecting no term type is ok. These annotations are handled as untyped.
The new termtype 'Public Note' needs to be... - 09:59 AM feature request #8346: Curators and admins can edit arbitrary Annotations (Notes)
- Fields are implemented. Additional field can be added.
Question: should we take one entry as default (e.g. edition... - 10:54 AM feature request #7620 (Closed): RegistrationSearch implemented with Reference filter
- 09:33 AM feature request #7620: RegistrationSearch implemented with Reference filter
- Perfectly solved! This enhances the usabiliy of PhycoBank significantly.
Search functionality is available for
st...
07/03/2019
- 06:32 PM Revision b654a866 (cdm-dataportal): centralizing ckeck for Java-script developer mode
- 06:19 PM bug #8347: point map zooms to wrong area when using sphericalMercator maps like OpenTopo OSM etc.
- nicely done:
our example with NZ and DE: Planothidium victori:
http://test.e-taxonomy.eu/dataportal/preview/phyco... - 06:05 PM bug #8347: point map zooms to wrong area when using sphericalMercator maps like OpenTopo OSM etc.
- issue solved, please review
- 04:02 PM bug #8347 (Resolved): point map zooms to wrong area when using sphericalMercator maps like OpenTopo OSM etc.
- Applied in changeset commit:cdm-dataportal|95aba8b561b3695d047b50a25a24fc41f1f83b32.
- 04:00 PM bug #8347 (Closed): point map zooms to wrong area when using sphericalMercator maps like OpenTopo OSM etc.
- example:
* https://www.phycobank.org/cdm_dataportal/taxon/6e0895b4-64ee-4b1a-ba87-403ee7888f94
* http://test.e-t... - 05:59 PM Revision d30b89de (cdm-dataportal): replacing fixed background color yellow by class attribute 'row-active'
- 04:47 PM feature request #7620: RegistrationSearch implemented with Reference filter
- see above. The filter is not working.
With the given search strings all published registrations from new to old are ... - 12:57 PM feature request #7620: RegistrationSearch implemented with Reference filter
- The test server was not up to date. The problem which was causing this is fixed now. Please test again.
- 09:44 AM feature request #7620: RegistrationSearch implemented with Reference filter
- Field "Publication" available,
search functionality not given.
"Baikal" gives back Baikal-Taxa + African etc. taxa
... - 04:31 PM bug #8337: internal error, name type status missing, reference in name type not updated
- The duplicate type (first one) cannot be deleted in Vaadin, because it is not possible to open the record and to get ...
- 03:16 PM bug #8337 (Worksforme): internal error, name type status missing, reference in name type not updated
- This problem can not be reproduced on the test system. The duplicate name type designations can be removed by deletin...
- 04:28 PM Revision 9f567421 (taxeditor): Updated version in pom / project files to taxeditor version : 5.7.4 and cdmlib version : 5.7.0
- 04:02 PM Revision 40308723 (cdm-dataportal): avoiding php warning due to uninitialized variable
- 04:01 PM Revision 95aba8b5 (cdm-dataportal): fix #8347 fixing wrong projection transformation for data maps
- 02:16 PM Revision 738771f2 (cdm-dataportal): wrapping 'no associated taxon' message in div to allow styling
- 02:15 PM Revision 7ff3b0ef (cdm-dataportal): wrapping 'no associated taxon' message in div to allow styling
- 12:49 PM Revision 6403c1de (cdmlib): code cleaning
- 11:11 AM Revision 49d17d7d (cdm-webapp): jenkins bumping cdmlib.version and cdm.vaadin.version to 5.9.0-SNAPSHOT
- 10:27 AM Revision 600fbce8 (cdm-webapp): changing wp5.e-taxonomy.eu/mavenrepo to cybertaxonomy.eu/mavenrepo
07/02/2019
- 06:18 PM feature request #8346: Curators and admins can edit arbitrary Annotations (Notes)
- please review
(the solution is not a beauty but it is working!) - 06:17 PM feature request #8346 (Resolved): Curators and admins can edit arbitrary Annotations (Notes)
- Applied in changeset commit:cdm-vaadin|c02fc11ae73482b118a48cfb4fca97e7302bda1f.
- 05:58 PM feature request #8346 (Closed): Curators and admins can edit arbitrary Annotations (Notes)
- The FilterableAnnotationsField should offer the option to edit arbitrary notes (annotations) in all views where it is...
- 06:17 PM Revision c02fc11a (cdm-vaadin): fix #8346 flexible editing of annotations for Curator and Admin roles
- 04:51 PM Revision 1cdc1f46 (cdmlib): using CleanSweepInsertLoadStrategy in SecurityTest
- 04:42 PM Revision 1c2aeca4 (cdmlib): adding missing REGISTRATION* tables to the ClearDBDataSet.xml
- 04:17 PM Revision 5f71008d (cdmlib): using CleanSweepInsertLoadStrategy in DerivedUnitConverterIntegrationTest
- 04:14 PM feature request #7620: RegistrationSearch implemented with Reference filter
- ready for review
- 04:14 PM Revision c5089cec (cdm-dataportal): ref #7620 reference filter options for the Registration search
- 04:08 PM Revision 824ae003 (cdm-dataportal): ref #8320 fixing tab color specificity probelm
- 03:19 PM Revision 88131480 (cdm-dataportal): ref #8287 re-enabling type status filter multiple options
- 03:18 PM Revision bb5a542c (cdm-dataportal): typo
- 03:15 PM feature request #7621 (Closed): registration search also covers typified names
- fully solved
- 03:14 PM feature request #8330 (Closed): RegistrationDao search method
- fully solved
- 03:11 PM bug #8287: RegistrationServiceImpl.page( .... Collection<UUID> typeDesignationStatusUuids ... ) fails when NULL and UUIDs are passed
- please review
- 03:10 PM bug #8287 (Resolved): RegistrationServiceImpl.page( .... Collection<UUID> typeDesignationStatusUuids ... ) fails when NULL and UUIDs are passed
- Applied in changeset commit:cdmlib|c40f420c355ee29b3b31e575c8d630f59cf55c0e.
- 03:10 PM Revision c40f420c (cdmlib): fix #8287 implementing support for null type status as filter value in Registration service
- 02:31 PM Revision f54d835b (cdmlib): Revert "adding missing MatchMode in createRestriction()"
- This reverts commit 1eca13fafa584494a9300c1a6844d435ca5ae897.
- 02:07 PM Revision c1f34da9 (cdmlib): ref #8248 Add character to export (partially)
- 01:44 PM feature request #8345 (Closed): RegistrationListView: filter option for publication
- 01:42 PM feature request #8345 (Resolved): RegistrationListView: filter option for publication
- Applied in changeset commit:cdm-vaadin|c609114c696fe3512d2c485b9d4e6a1a52dafac9.
- 01:41 PM feature request #8345 (Closed): RegistrationListView: filter option for publication
- extend the existing filters by a text field for publication citation patterns
- 01:43 PM bug #7885 (In Progress): registration search by name finds also typifications for this name
- 01:43 PM bug #7885 (Closed): registration search by name finds also typifications for this name
- 12:59 PM bug #7885 (In Progress): registration search by name finds also typifications for this name
- 01:42 PM Revision c609114c (cdm-vaadin): fix #8345 adding filter text field for publications in RegistrationListView
- 01:37 PM Revision 44787444 (cdmlib): ignoring RedmineRegistrationMessageServiceTest since RedmineRegistrationMessageService is going to be removed
- 01:34 PM Revision 1eca13fa (cdmlib): adding missing MatchMode in createRestriction()
- 01:05 PM bug #8327 (Duplicate): record with publication date is competing with curation status, set to preparation or curation
- closing as duplicate
- 11:48 AM Revision ff454f55 (cdm-dataportal): ref #8182: use bgbm-import instead of ip address
- 11:18 AM feature request #8342: shift field Field number
- This is potentially easy to fix, thus i am setting this to HIGHEST. If it is more time consuming we should downgrade ...
- 11:01 AM Revision f60b52c4 (cdm-dataportal): ref #8182: Dna should be DNA
- 10:41 AM Revision c7637ad4 (cdmlib): fix failing test (add anywher to createRestrictions)
07/01/2019
- 06:52 PM Revision f69d6df9 (cdmlib): ref #8330 removing unused and obsolete service methods which are replaces by the new one
- 06:35 PM Revision 69fd8336 (cdmlib): ref #7620 rest service /registrationDTO/find with filter string for references
- 06:32 PM Revision 58cbdc8e (cdmlib): ref #7620 filtered registration search implemented with filter string for references
- 05:07 PM Revision fbe02574 (cdmlib): ref #8330 ref #7885 removing confusing typo in test data
- 04:31 PM Revision bae3fd55 (cdmlib): ref #7885 tests for registration search by typified name and implementing order by
- 03:28 PM Revision 9ccf877c (cdmlib): ref #8330 dao method for filtered registration search implemented: reprocduces existing functionality plus extended name search ref #7885
- 02:45 PM feature request #6709 (Closed): Do not show UUID on media page
- Andreas Kohlbecker wrote:
> e.g.: http://int.e-taxonomy.eu/dataportal/integration/reference/cdm_dataportal/media/d0b... - 02:42 PM feature request #6709: Do not show UUID on media page
- e.g.: http://int.e-taxonomy.eu/dataportal/integration/reference/cdm_dataportal/media/d0bf650c-4cc6-4dfe-bb2f-a289b426...
- 10:45 AM feature request #6709 (Feedback): Do not show UUID on media page
- Andreas Kohlbecker wrote:
> HI Patrick, is this issue about the UUID being used as replacement for missing title att... - 01:51 PM Revision c2447263 (cdmlib): ref #8330 completing documentation regarding wildcards and fixing bug with MatchMode LIKE when using Restrictions
- 01:51 PM Revision 84cd43e7 (cdmlib): ref #8330 documentation for RegistrationService.page and RegistrationWorkingsetService.pageDTO
- 01:51 PM Revision d0bdcc3f (cdmlib): ref #8330 implementing tests for RegsitrationService.page and RegistrationWorkingsetService.pageDTO
- 01:43 PM Revision caa17126 (cdmlib): ref #8344: add dummy line in empty simple facts table
- 01:42 PM feature request #8344 (Closed): Cdm light export: add dummy line in simple facts table
- Hallo Katja,
...
Dann etwas für den Release, wenn’s geht:
Ich verwende die SimpleFact Tabelle im weiteren Verlauf ... - 01:41 PM feature request #8294 (Resolved): Make display of ID in source and ID Namespace configurable
- please review
06/28/2019
- 02:05 PM feature request #8320 (Closed): Links to reference page as appendend icon instead of having the whole citation as link
- done
- 02:04 PM feature request #8320 (Resolved): Links to reference page as appendend icon instead of having the whole citation as link
- Applied in changeset commit:cdm-dataportal|2ffe4d59b3a9ac3747f0b94a761adf3ea0f6de59.
- 02:04 PM Revision 2ffe4d59 (cdm-dataportal): fix #8320 links to references as appended icon & custom icon font set
- - theme method extended by second doIconLink attribute
- all usages of the theme methods with icon link except for r... - 01:17 PM feature request #7620 (Resolved): RegistrationSearch implemented with Reference filter
- Applied in changeset commit:cdm-dataportal|384ff2ba6f98d8d869093ff4be0fea7eb81d7a0e.
- 01:16 PM Revision 384ff2ba (cdm-dataportal): fix #7620 links to references as appended icon link & new custom icon fontset
- - theme method extended by second doIconLink attribute
- all usages of the theme methods with icon link except for r... - 01:05 PM Revision f45c46ef (cdm-dataportal): updating information on compass version
- 11:47 AM Revision a4f3f99c (taxeditor): ref #8294: add preference page for id in namespace and namespace in source
06/27/2019
- 07:13 PM bug #8343 (Rejected): potential timezone problem in application stack
- I don't think that we are having a timezone shift problem since the date is stored in the db as 2018-06-11 22:00:00. ...
- 07:07 PM bug #8343 (Closed): potential timezone problem in application stack
- Ist denn genau definiert, um welche Zeitzone es sich handelt? Ich frage auch weil auf https://www.phycobank.org/cdm_d...
- 07:12 PM task #8118: Update MySQL drivers
- **The proper solution it the timezone problem is documented at MySqlFaq#The-server-time-zone-value-is-unrecognized**
- 07:03 PM feature request #8245 (Resolved): Improve representation of DescriptionElementBase.timeperiod
- done, for testing you can use for example http://edit.test/d7/reference_int/cdm_dataportal/taxon/c246856f-c03e-4cb7-a...
- 05:27 PM task #7269 (Closed): Use redmine as message hub for submitter curator communication
- even if it has been completely implemented this feature has been rejected afterwards
- 05:26 PM task #7269 (Rejected): Use redmine as message hub for submitter curator communication
- 05:21 PM Revision ef6a4ce9 (cdm-dataportal): ref #8245 stripping trailing zeros in description element time priods, with test
- 05:19 PM Revision ee5d420b (cdm-dataportal): ref #4372 page elements DupalBlock and FeatureBlock compatible also with zen theme - solving problems
- 05:00 PM feature request #4372 (In Progress): Selenium PortalPage class also suitable for zen-basetheme
- 04:59 PM Revision 1b1c2bc9 (cdm-dataportal): ref #4372 page elementd DupalBlock and FeatureBlock compatible also with zen theme
- 02:26 PM task #7296 (Closed): externalize redmine api key
- all resources removed
- 02:26 PM Revision 8ec6c716 (cdmlib): ref #7296 removing all config files related to the RemineMessagingService since this has been dropped completely
- 02:26 PM Revision 76eaf322 (cdmlib): ref #8321 cleaning up cotroller code
- 02:23 PM Revision b74a2730 (taxeditor): ref #7920: fix delete of preferences
- 02:23 PM Revision 605d9128 (taxeditor): minor - avoid NPE
- 02:20 PM task #4177 (Resolved): display of name relationships in synonymy broken
- I detached the task #5856: "[DISCUSS] Consider implementing additional name relationships" from this issue so that we...
- 02:14 PM Revision 276ef31b (taxeditor): Merge branch 'develop' of ssh://dev.e-taxonomy.eu/var/git/taxeditor into develop
- 02:12 PM Revision ef8972ee (taxeditor): smaller changes for abcd imports in tax editor
- 02:11 PM Revision d9fabe96 (cdmlib): smaller changes in ABCD import - continue
- 02:10 PM Revision 5479041f (cdmlib): Merge branch 'develop' of ssh://dev.e-taxonomy.eu/var/git/cdmlib into develop
- 02:09 PM Revision f769c20b (cdmlib): smaller changes in ABCD import
- 10:34 AM feature request #7408 (Feedback): [E+M] Support for preferred common names in data portal
- Is this ticket still relevant. I seem to remember that the preferred common names are currently in discussion.
- 10:25 AM bug #8050 (Closed): Create blocking registrations for un-registered names which are to be used in nomenclatural acts
- Okay, da offene Punkt auch mit Workflows zu tun hat, sollten wir den kommende Woche diskutieren. Schließe wie besproc...
- 09:04 AM bug #8050 (Resolved): Create blocking registrations for un-registered names which are to be used in nomenclatural acts
- Wolf-Henning Kusber wrote:
> Das Problem in !#11 und !#12:
>
> Konkret möchte ich für einen existierenden Namen, ... - 09:08 AM Revision 430b5a6c (cdmlib): ref #8182: minor
06/26/2019
- 06:38 PM Revision 44707ee3 (cdm-dataportal): ref #6316 refactoring for cleaner original source code - bug fix
- 05:52 PM feature request #6709 (Resolved): Do not show UUID on media page
- done
- 05:11 PM feature request #6709: Do not show UUID on media page
- hi Patrick, could you please answer on my question?
- 05:51 PM feature request #6316 (Resolved): display source references of media objects in media page
- done and also test implemented.
- 05:50 PM Revision 20e02fff (cdm-dataportal): test for media page title ref #6709 and original source display ref #6316
- 05:28 PM Revision 50d9206b (cdm-dataportal): ref #6709 better fallback strategy for media page titles
- 05:09 PM Revision 27bceb70 (cdm-dataportal): ref #6316 fixing two layout issues:
- - html was processes as plain text
- removing URI from titlecache when type is WebPage - 04:59 PM bug #8321: Namepage shows wrong taxa as related to the name
- Both Eunotia krammeri with different Author teams are not mixed anymore. The described problem is solved and the tick...
- 04:49 PM feature request #8342: shift field Field number
- Avoid overlap with collection date fields
- 04:47 PM feature request #8342 (Closed): shift field Field number
- see screen shot
 - 04:46 PM Revision bb93d5d1 (cdm-dataportal): ref #6316 refactoring for cleaner original source code
- 04:33 PM feature request #8341 (New): status without scroll bar
reference detail not realy needed in our project. This could be as small as possible. It w...- 03:38 PM bug #8050: Create blocking registrations for un-registered names which are to be used in nomenclatural acts
- Das Problem in !#11 und !#12:
Konkret möchte ich für einen existierenden Namen, z.B. "Micrasterias" einen (Namens-... - 02:13 PM Revision d2be662d (cdmlib): ref #8182: accession number is required in webservice
- 01:59 PM task #5857 (Resolved): show nomenclatural status for for representations of TaxonName
- Andreas Kohlbecker wrote:
> we (Andreas & Henning) decided to move the footnote in front of the relationship label d... - 01:56 PM Revision 1ee58da8 (cdmlib): ref #8182: add header to failed response
- 01:16 PM Revision ce347d23 (cdm-dataportal): ref #8182: add link to ncbi for blast result
- 12:48 PM bug #8340 (Rejected): is accepted for Footnotes missing and with wrong index
- The option "Display is accepted for ... on taxon pages when coming from a synonym link." needs to be turned on for th...
- 12:27 PM Revision 4366f68b (cdm-dataportal): fixing Undefined variable
- 10:05 AM Revision b3e21c63 (cdmlib): ref #8182: handle not existing dna for accession number
06/25/2019
- 05:46 PM Revision 4c812e71 (cdm-dataportal): ref #8182: remove local server for blast ws and add collabsible rows in specimen table and blast result table
- 05:41 PM feature request #8304: Name page redirects to according taxon depending on query parameter
- The layout settings page () now offers the following checkbox:
 - 04:47 PM feature request #8304: Name page redirects to according taxon depending on query parameter
- The suggestion made in the issue description to use the name render templates to fine tune the behavior of the autore...
- 03:47 PM feature request #8304: Name page redirects to according taxon depending on query parameter
- Hallo,
ich bemerke gerade eine Veränderung in der Anzeige von Homonymbeziehungen:
Wenn ich in http://cichori... - 05:37 PM Revision 14832ae9 (cdm-dataportal): ref #8304 global switch to enable the name page redirecting to taxa
- 04:59 PM Revision f264279e (cdm-dataportal): minor improvements regarding method documentation
- 02:35 PM Revision 9b9b5b41 (cdmlib): cdmlight: change area category to the area level
- 01:39 PM Revision 833731f1 (cdmlib): ref #8248 Add feature to export (partially)
- 01:28 PM feature request #8339 (New): Completely remove the potentially redundant 'acceptedFor' parameter from synonym page
- 'acceptedFor' parameter which is used by the synonym page can potentially be replaced or removed.
this parameter i... - 11:18 AM bug #8338 (New): Newly created structural modifier terms are not available in details view
- steps to reproduce
1. Create a character in the character editor
1. Look at the available "Structural Modifiers" ... - 10:24 AM Revision 979d74e5 (cdmlib): ref #8248, #6774 Add character to export
- - adapt test
06/24/2019
- 02:48 PM Revision 2bbdfed5 (taxeditor): Add facet information to term search result composite
- 11:35 AM bug #8337 (Worksforme): internal error, name type status missing, reference in name type not updated
- In the normal workflow a prelininary reference title was databased, than a new genus, a new species, than a name type...
06/21/2019
- 06:02 PM Revision 4c9c08a9 (taxeditor): ref #8248 Set import source citation in import wizard
- 05:59 PM Revision 82e317b8 (cdmlib): ref #8248, #6774 Add sources to import/export
- 02:18 PM Revision 2ac55f2d (cdmlib): ref #8248, #6774 Improve import/export performance
06/20/2019
- 05:27 PM Revision e9c37045 (taxeditor): ref #7589 Save matrix rows in one service call
- 02:46 PM Revision 723b8572 (taxeditor): ref #8335 minor fixes for active state evaluation
- 02:29 PM Revision ce524345 (taxeditor): ref #8335 Persist table state when dialog is closed
- 02:12 PM Revision c2e9c57b (taxeditor): ref #8335 Initially select default state + minor refactoring
- 01:27 PM Revision a8397603 (taxeditor): ref #8335 Add default state to table states
- 12:49 PM task #8336 (Duplicate): Unignore FeatureTest
- Since FeatureNode and Tree was moved to term package it does not work anymore
eu.etaxonomy.cdm.io.jaxb.FeatureTest
06/19/2019
- 05:04 PM Revision 3bbff684 (cdmlib): ref #8335 Add character matrix table state DB preference
- 05:03 PM Revision 50c9c090 (taxeditor): ref #8335 Store character matrix table state as DB preference
- 05:02 PM feature request #8335 (Closed): Store character matrix table state as DB preference
- 01:24 PM bug #8332 (Closed): Excel matrix exports only the visible rows
- Tilo tested on nightly. Works fine.
- 12:22 PM bug #8332 (Resolved): Excel matrix exports only the visible rows
- Applied in changeset commit:taxeditor|34227fd826d1fd6e43b82f22ec35a5123bc9d813.
- 01:23 PM feature request #8333 (Closed): Show modifiers for states in Character Matrix
- Tilo tested on nightly. Works fine.
- 12:21 PM Revision 7f3f2b38 (taxeditor): ref #7589 Layer refactoring for character matrix
- 12:17 PM Revision 34227fd8 (taxeditor): fix #8332 Scroll 1px before exporting to load all rows in tree format
- 11:20 AM feature request #8334 (Closed): Move sources for type designations to details view
- Move sources for type designations to details view and remove them from the supplemental data view.
06/18/2019
- 06:49 PM feature request #8333 (Resolved): Show modifiers for states in Character Matrix
- Applied in changeset commit:taxeditor|9c38452812e67e28a5d1dfa09addf7ec9da01c28.
- 06:48 PM feature request #8333 (Closed): Show modifiers for states in Character Matrix
- 06:49 PM Revision 9c384528 (taxeditor): fix #8333 Show modifiers for states in Character Matrix
- 03:31 PM bug #8332 (Closed): Excel matrix exports only the visible rows
- When opening a character matrix and exporting it to excel only the visible rows are exported.
Once scrolled down s...
06/17/2019
- 05:11 PM Revision 3d4b3223 (cdmlib-apps): cleanup some production destinations
- 05:01 PM Revision f0f14283 (cdmlib-apps): cleanup some production destinations
- 04:01 PM Revision 8b33f310 (taxeditor): Fix GFBio spelling
- 03:41 PM Revision f9b7a561 (taxeditor): add dnaSource in abcd import wizard
- 01:21 PM bug #8313 (Closed): Multiple categorical data get deleted when clicked on in Character Matrix
- Tilo tested on nightly. Works as expected.
- 01:13 PM bug #8313 (Resolved): Multiple categorical data get deleted when clicked on in Character Matrix
- Fixed with commit:taxeditor|270642049c506384a9dc6f4d398e5fdabe4ddf47
- 12:09 PM Revision e1530610 (cdmlib): add hybrid name save to import base class
- 12:09 PM Revision aecb5658 (cdmlib): add E+M rank uuids to rank class
- 12:08 PM Revision d0c54e6d (cdmlib-apps): #2937 add hybrid name save to import base class
- 12:06 PM Revision c8a2de96 (cdmlib-apps): ref #5448 add Gefäßpflanzenimport in Excel (v1)
- 11:56 AM Revision 5b9d66b0 (cdmlib-apps): cleanup some production destinations
- 11:48 AM Revision 35e24b22 (cdmlib): Merge branch 'develop' of ssh://dev.e-taxonomy.eu/var/git/cdmlib into develop
- 11:47 AM Revision 7900fbf1 (cdmlib): set dnaSource to null in test
- 11:47 AM Revision e54a5a27 (cdmlib): ref #8248, #6774 Add progress monitor to import/export
- 10:48 AM Revision 15957179 (cdmlib): smaller changes in abcd import and cdm light export
- 10:35 AM Revision f0fdfff0 (cdmlib): ref #6774 Add progress monitor to owl export
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