Activity
From 05/29/2019 to 06/27/2019
06/27/2019
- 07:13 PM bug #8343 (Rejected): potential timezone problem in application stack
- I don't think that we are having a timezone shift problem since the date is stored in the db as 2018-06-11 22:00:00. ...
- 07:07 PM bug #8343 (Closed): potential timezone problem in application stack
- Ist denn genau definiert, um welche Zeitzone es sich handelt? Ich frage auch weil auf https://www.phycobank.org/cdm_d...
- 07:12 PM task #8118: Update MySQL drivers
- **The proper solution it the timezone problem is documented at MySqlFaq#The-server-time-zone-value-is-unrecognized**
- 07:03 PM feature request #8245 (Resolved): Improve representation of DescriptionElementBase.timeperiod
- done, for testing you can use for example http://edit.test/d7/reference_int/cdm_dataportal/taxon/c246856f-c03e-4cb7-a...
- 05:27 PM task #7269 (Closed): Use redmine as message hub for submitter curator communication
- even if it has been completely implemented this feature has been rejected afterwards
- 05:26 PM task #7269 (Rejected): Use redmine as message hub for submitter curator communication
- 05:21 PM Revision ef6a4ce9 (cdm-dataportal): ref #8245 stripping trailing zeros in description element time priods, with test
- 05:19 PM Revision ee5d420b (cdm-dataportal): ref #4372 page elements DupalBlock and FeatureBlock compatible also with zen theme - solving problems
- 05:00 PM feature request #4372 (In Progress): Selenium PortalPage class also suitable for zen-basetheme
- 04:59 PM Revision 1b1c2bc9 (cdm-dataportal): ref #4372 page elementd DupalBlock and FeatureBlock compatible also with zen theme
- 02:26 PM task #7296 (Closed): externalize redmine api key
- all resources removed
- 02:26 PM Revision 8ec6c716 (cdmlib): ref #7296 removing all config files related to the RemineMessagingService since this has been dropped completely
- 02:26 PM Revision 76eaf322 (cdmlib): ref #8321 cleaning up cotroller code
- 02:23 PM Revision b74a2730 (taxeditor): ref #7920: fix delete of preferences
- 02:23 PM Revision 605d9128 (taxeditor): minor - avoid NPE
- 02:20 PM task #4177 (Resolved): display of name relationships in synonymy broken
- I detached the task #5856: "[DISCUSS] Consider implementing additional name relationships" from this issue so that we...
- 02:14 PM Revision 276ef31b (taxeditor): Merge branch 'develop' of ssh://dev.e-taxonomy.eu/var/git/taxeditor into develop
- 02:12 PM Revision ef8972ee (taxeditor): smaller changes for abcd imports in tax editor
- 02:11 PM Revision d9fabe96 (cdmlib): smaller changes in ABCD import - continue
- 02:10 PM Revision 5479041f (cdmlib): Merge branch 'develop' of ssh://dev.e-taxonomy.eu/var/git/cdmlib into develop
- 02:09 PM Revision f769c20b (cdmlib): smaller changes in ABCD import
- 10:34 AM feature request #7408 (Feedback): [E+M] Support for preferred common names in data portal
- Is this ticket still relevant. I seem to remember that the preferred common names are currently in discussion.
- 10:25 AM bug #8050 (Closed): Create blocking registrations for un-registered names which are to be used in nomenclatural acts
- Okay, da offene Punkt auch mit Workflows zu tun hat, sollten wir den kommende Woche diskutieren. Schließe wie besproc...
- 09:04 AM bug #8050 (Resolved): Create blocking registrations for un-registered names which are to be used in nomenclatural acts
- Wolf-Henning Kusber wrote:
> Das Problem in !#11 und !#12:
>
> Konkret möchte ich für einen existierenden Namen, ... - 09:08 AM Revision 430b5a6c (cdmlib): ref #8182: minor
06/26/2019
- 06:38 PM Revision 44707ee3 (cdm-dataportal): ref #6316 refactoring for cleaner original source code - bug fix
- 05:52 PM feature request #6709 (Resolved): Do not show UUID on media page
- done
- 05:11 PM feature request #6709: Do not show UUID on media page
- hi Patrick, could you please answer on my question?
- 05:51 PM feature request #6316 (Resolved): display source references of media objects in media page
- done and also test implemented.
- 05:50 PM Revision 20e02fff (cdm-dataportal): test for media page title ref #6709 and original source display ref #6316
- 05:28 PM Revision 50d9206b (cdm-dataportal): ref #6709 better fallback strategy for media page titles
- 05:09 PM Revision 27bceb70 (cdm-dataportal): ref #6316 fixing two layout issues:
- - html was processes as plain text
- removing URI from titlecache when type is WebPage - 04:59 PM bug #8321: Namepage shows wrong taxa as related to the name
- Both Eunotia krammeri with different Author teams are not mixed anymore. The described problem is solved and the tick...
- 04:49 PM feature request #8342: shift field Field number
- Avoid overlap with collection date fields
- 04:47 PM feature request #8342 (Closed): shift field Field number
- see screen shot
 - 04:46 PM Revision bb93d5d1 (cdm-dataportal): ref #6316 refactoring for cleaner original source code
- 04:33 PM feature request #8341 (New): status without scroll bar
reference detail not realy needed in our project. This could be as small as possible. It w...- 03:38 PM bug #8050: Create blocking registrations for un-registered names which are to be used in nomenclatural acts
- Das Problem in !#11 und !#12:
Konkret möchte ich für einen existierenden Namen, z.B. "Micrasterias" einen (Namens-... - 02:13 PM Revision d2be662d (cdmlib): ref #8182: accession number is required in webservice
- 01:59 PM task #5857 (Resolved): show nomenclatural status for for representations of TaxonName
- Andreas Kohlbecker wrote:
> we (Andreas & Henning) decided to move the footnote in front of the relationship label d... - 01:56 PM Revision 1ee58da8 (cdmlib): ref #8182: add header to failed response
- 01:16 PM Revision ce347d23 (cdm-dataportal): ref #8182: add link to ncbi for blast result
- 12:48 PM bug #8340 (Rejected): is accepted for Footnotes missing and with wrong index
- The option "Display is accepted for ... on taxon pages when coming from a synonym link." needs to be turned on for th...
- 12:27 PM Revision 4366f68b (cdm-dataportal): fixing Undefined variable
- 10:05 AM Revision b3e21c63 (cdmlib): ref #8182: handle not existing dna for accession number
06/25/2019
- 05:46 PM Revision 4c812e71 (cdm-dataportal): ref #8182: remove local server for blast ws and add collabsible rows in specimen table and blast result table
- 05:41 PM feature request #8304: Name page redirects to according taxon depending on query parameter
- The layout settings page () now offers the following checkbox:
 - 04:47 PM feature request #8304: Name page redirects to according taxon depending on query parameter
- The suggestion made in the issue description to use the name render templates to fine tune the behavior of the autore...
- 03:47 PM feature request #8304: Name page redirects to according taxon depending on query parameter
- Hallo,
ich bemerke gerade eine Veränderung in der Anzeige von Homonymbeziehungen:
Wenn ich in http://cichori... - 05:37 PM Revision 14832ae9 (cdm-dataportal): ref #8304 global switch to enable the name page redirecting to taxa
- 04:59 PM Revision f264279e (cdm-dataportal): minor improvements regarding method documentation
- 02:35 PM Revision 9b9b5b41 (cdmlib): cdmlight: change area category to the area level
- 01:39 PM Revision 833731f1 (cdmlib): ref #8248 Add feature to export (partially)
- 01:28 PM feature request #8339 (New): Completely remove the potentially redundant 'acceptedFor' parameter from synonym page
- 'acceptedFor' parameter which is used by the synonym page can potentially be replaced or removed.
this parameter i... - 11:18 AM bug #8338 (New): Newly created structural modifier terms are not available in details view
- steps to reproduce
1. Create a character in the character editor
1. Look at the available "Structural Modifiers" ... - 10:24 AM Revision 979d74e5 (cdmlib): ref #8248, #6774 Add character to export
- - adapt test
06/24/2019
- 02:48 PM Revision 2bbdfed5 (taxeditor): Add facet information to term search result composite
- 11:35 AM bug #8337 (Worksforme): internal error, name type status missing, reference in name type not updated
- In the normal workflow a prelininary reference title was databased, than a new genus, a new species, than a name type...
06/21/2019
- 06:02 PM Revision 4c9c08a9 (taxeditor): ref #8248 Set import source citation in import wizard
- 05:59 PM Revision 82e317b8 (cdmlib): ref #8248, #6774 Add sources to import/export
- 02:18 PM Revision 2ac55f2d (cdmlib): ref #8248, #6774 Improve import/export performance
06/20/2019
- 05:27 PM Revision e9c37045 (taxeditor): ref #7589 Save matrix rows in one service call
- 02:46 PM Revision 723b8572 (taxeditor): ref #8335 minor fixes for active state evaluation
- 02:29 PM Revision ce524345 (taxeditor): ref #8335 Persist table state when dialog is closed
- 02:12 PM Revision c2e9c57b (taxeditor): ref #8335 Initially select default state + minor refactoring
- 01:27 PM Revision a8397603 (taxeditor): ref #8335 Add default state to table states
- 12:49 PM task #8336 (Duplicate): Unignore FeatureTest
- Since FeatureNode and Tree was moved to term package it does not work anymore
eu.etaxonomy.cdm.io.jaxb.FeatureTest
06/19/2019
- 05:04 PM Revision 3bbff684 (cdmlib): ref #8335 Add character matrix table state DB preference
- 05:03 PM Revision 50c9c090 (taxeditor): ref #8335 Store character matrix table state as DB preference
- 05:02 PM feature request #8335 (Closed): Store character matrix table state as DB preference
- 01:24 PM bug #8332 (Closed): Excel matrix exports only the visible rows
- Tilo tested on nightly. Works fine.
- 12:22 PM bug #8332 (Resolved): Excel matrix exports only the visible rows
- Applied in changeset commit:taxeditor|34227fd826d1fd6e43b82f22ec35a5123bc9d813.
- 01:23 PM feature request #8333 (Closed): Show modifiers for states in Character Matrix
- Tilo tested on nightly. Works fine.
- 12:21 PM Revision 7f3f2b38 (taxeditor): ref #7589 Layer refactoring for character matrix
- 12:17 PM Revision 34227fd8 (taxeditor): fix #8332 Scroll 1px before exporting to load all rows in tree format
- 11:20 AM feature request #8334 (Closed): Move sources for type designations to details view
- Move sources for type designations to details view and remove them from the supplemental data view.
06/18/2019
- 06:49 PM feature request #8333 (Resolved): Show modifiers for states in Character Matrix
- Applied in changeset commit:taxeditor|9c38452812e67e28a5d1dfa09addf7ec9da01c28.
- 06:48 PM feature request #8333 (Closed): Show modifiers for states in Character Matrix
- 06:49 PM Revision 9c384528 (taxeditor): fix #8333 Show modifiers for states in Character Matrix
- 03:31 PM bug #8332 (Closed): Excel matrix exports only the visible rows
- When opening a character matrix and exporting it to excel only the visible rows are exported.
Once scrolled down s...
06/17/2019
- 05:11 PM Revision 3d4b3223 (cdmlib-apps): cleanup some production destinations
- 05:01 PM Revision f0f14283 (cdmlib-apps): cleanup some production destinations
- 04:01 PM Revision 8b33f310 (taxeditor): Fix GFBio spelling
- 03:41 PM Revision f9b7a561 (taxeditor): add dnaSource in abcd import wizard
- 01:21 PM bug #8313 (Closed): Multiple categorical data get deleted when clicked on in Character Matrix
- Tilo tested on nightly. Works as expected.
- 01:13 PM bug #8313 (Resolved): Multiple categorical data get deleted when clicked on in Character Matrix
- Fixed with commit:taxeditor|270642049c506384a9dc6f4d398e5fdabe4ddf47
- 12:09 PM Revision e1530610 (cdmlib): add hybrid name save to import base class
- 12:09 PM Revision aecb5658 (cdmlib): add E+M rank uuids to rank class
- 12:08 PM Revision d0c54e6d (cdmlib-apps): #2937 add hybrid name save to import base class
- 12:06 PM Revision c8a2de96 (cdmlib-apps): ref #5448 add Gefäßpflanzenimport in Excel (v1)
- 11:56 AM Revision 5b9d66b0 (cdmlib-apps): cleanup some production destinations
- 11:48 AM Revision 35e24b22 (cdmlib): Merge branch 'develop' of ssh://dev.e-taxonomy.eu/var/git/cdmlib into develop
- 11:47 AM Revision 7900fbf1 (cdmlib): set dnaSource to null in test
- 11:47 AM Revision e54a5a27 (cdmlib): ref #8248, #6774 Add progress monitor to import/export
- 10:48 AM Revision 15957179 (cdmlib): smaller changes in abcd import and cdm light export
- 10:35 AM Revision f0fdfff0 (cdmlib): ref #6774 Add progress monitor to owl export
06/14/2019
- 05:55 PM Revision d703fe8b (cdmlib): ref #8248, #6774 Add media to import/export
- 11:58 AM Revision bf3145f7 (cdmlib): ref #8248 Only add term to vocabulary if term is newly created
- 11:53 AM Revision 3bb112a0 (cdmlib): ref #8248 Only add term to vocabulary if term is newly created
- 09:56 AM Revision 2b310e3a (taxeditor): Add context menu for structure/property tree creation
06/13/2019
- 04:56 PM Revision 27064204 (taxeditor): ref #7589 Fix multiple selection for categorical data in matrix editor
- 01:15 PM Revision 555a414b (cdmlib): ref #8248, #6774 Add plural to import/export
- - add test for plural and abbrevLabel
- 09:49 AM Revision dd5402d9 (taxeditor): ref #8260 Fix version and UUID/ID section in supp data view
- 09:48 AM Revision de051e6a (cdmlib): ref #8248, #6774 Add symbol, symbol2 and idInVocabulary to import/export
- - change rdf identifier to lowercase
- 09:30 AM bug #8331 (New): Editor is unresponsive after sec reference replacement
- mail WB:
Betreff: TaxEditor hängt nach Subtree Sec-Replacement
Hallo,
inzwischen gemerkt – tut er nicht, aber:...
06/12/2019
- 12:41 PM bug #8260 (Resolved): Details and Supplemental Data View do not save the expansion state of sections
- This should now be fixed. The state of all subsections was not saved before.
- 12:39 PM Revision 98db3bf7 (taxeditor): ref #8260 Complete refactoring of expansion state saving
- 10:30 AM feature request #8283: Allow adding media to terms in taxeditor
- Andreas Müller wrote:
> The data may got lost the following way.
>
> * Open term
> * add media
> * open referen... - 10:16 AM feature request #8283: Allow adding media to terms in taxeditor
- Andreas Müller wrote:
> PP just added some more code. Could you check if this also needs to be cherry picked.
> Rev... - 10:26 AM feature request #8257 (Closed): Remove factory methods for term node creation
06/11/2019
- 04:25 PM feature request #8293: Distribution preferences for details view should be serverside preferences
- now, the vocabulary defined in the distribution editor preference is used for the area filter
- 03:03 PM feature request #8293 (In Progress): Distribution preferences for details view should be serverside preferences
- 03:02 PM feature request #8293: Distribution preferences for details view should be serverside preferences
- now the distribution status comes from the same preference and the input of the combo box is updated depending on the...
- 03:37 PM Revision 91d58d15 (taxeditor): ref #8293: use distribution editor preference for area filter in details view
- 02:51 PM Revision 63851d14 (taxeditor): ref #8293: update drop down when selection of area changed
- 02:29 PM feature request #8323 (Resolved): Make nom.status and rank lists a CdmPreference
- please review
- 12:11 PM feature request #8323 (In Progress): Make nom.status and rank lists a CdmPreference
- 02:19 PM Revision b3e9c172 (taxeditor): ref #8323: add nomencl status type admin preference
- 12:12 PM Revision a78e0414 (taxeditor): ref #8323: add rank preference to db prefs and use CheckBoxTreeComposite in pref page
06/07/2019
- 05:58 PM feature request #8016 (Closed): Registration page: subheadline with event type
- 05:16 PM feature request #8016: Registration page: subheadline with event type
- Ja, jetzt sieht es gut aus!
- 05:06 PM feature request #8016: Registration page: subheadline with event type
- Problem gelöst: http://test.e-taxonomy.eu/dataportal/preview/phycobank/cdm_dataportal/registration/http%253A%252F%252...
- 09:40 AM feature request #8016: Registration page: subheadline with event type
- Wording is fine :)
Remaining issue: subheadline is not between identifier and name, but displaced within a nomencl... - 08:56 AM feature request #8016: Registration page: subheadline with event type
- All suggestions and improvements are applied.
- 04:59 PM Revision 5a4a32da (cdm-dataportal): ref #8016 registration event type representation: fixing position (weight)
- 04:24 PM feature request #7975: Implement a block to display name relations
- In the developer standup today we almost already decided for adding an enumeration field to `NameRelationship` and to...
- 09:17 AM feature request #7975: Implement a block to display name relations
- Thanks, Andreas K.
@ Andreas M.: please keep in mind that some rules and/or article numbers of the ICN may change. I... - 09:05 AM feature request #7975 (Feedback): Implement a block to display name relations
- I think that adding a second reference to the `NameRelationship` and to `NomenclaturalStatus` would not hurt but woul...
- 08:55 AM Revision 0a02c62f (cdm-dataportal): ref #8016 registration event type representation: detail changes
06/06/2019
- 07:03 PM feature request #7975: Implement a block to display name relations
- "the reference of a nom. status or name relationship is meant to say who says that this status/relationship exists. I...
- 02:13 PM feature request #7975: Implement a block to display name relations
- As discussed the reference of a nom. status or name relationship is meant to say who says that this status/relationsh...
- 06:42 PM feature request #8016: Registration page: subheadline with event type
- Review:
Example http://phycobank.org/100005
Event: New name & new taxon & new nomeclatural type
Issue 1: nomecla... - 03:11 PM feature request #8016: Registration page: subheadline with event type
- ready for review
- 03:10 PM feature request #8016 (Resolved): Registration page: subheadline with event type
- Applied in changeset commit:cdm-dataportal|b90ef61802d5882f5cf1b0b5a1c6cee8c32e3f61.
- 06:00 PM bug #8287 (In Progress): RegistrationServiceImpl.page( .... Collection<UUID> typeDesignationStatusUuids ... ) fails when NULL and UUIDs are passed
- 05:58 PM feature request #8330 (Closed): RegistrationDao search method
- Due to the problems reported in #8287 a dedicated dao search method is needed. This method first of all needs to sup...
- 03:10 PM Revision b90ef618 (cdm-dataportal): fix #8016 implementing display of registration event type
- 02:34 PM bug #8329: Multiple representations exception when adding name relationship with already existing author
- If adding another name (without author Mill.) via relationship the problem does not appear while using Abies alba Mil...
- 02:29 PM bug #8329 (Worksforme): Multiple representations exception when adding name relationship with already existing author
- In E+M test I tried to add a name relationship to Pinus picea (synonym for Abies alba) via Name editor.
I added na... - 01:57 PM Revision 72d57201 (cdm-dataportal): ref #8182: specimen tree is collapsable, blast result table with clickable details
06/05/2019
- 03:03 PM feature request #7438 (Closed): implement citation suggestion in dataportal
- Works as expected. Open new ticket if details need to be changed
- 02:31 PM task #8118: Update MySQL drivers
- https://dev.mysql.com/doc/refman/8.0/en/time-zone-support.html
- 02:04 PM bug #8315: Parsing existing references with inReferences changes the inReference
- moved accidentaly back to 5.8
- 02:04 PM bug #8315 (Closed): Parsing existing references with inReferences changes the inReference
- 01:54 PM bug #8189: Allow configuration of 'user.home' via the spring environment
- Andreas Müller wrote:
> Andreas Kohlbecker wrote:
> > now that the changes made for this ticket are no longer causi... - 01:31 PM bug #8189: Allow configuration of 'user.home' via the spring environment
- Andreas Kohlbecker wrote:
> now that the changes made for this ticket are no longer causing any problems I will do t... - 12:25 PM bug #8189: Allow configuration of 'user.home' via the spring environment
- Therefore I do not agree to remove the method or to remove the MUST_EXIST_FILE (but we may remove if there is a bette...
- 12:23 PM bug #8189: Allow configuration of 'user.home' via the spring environment
- Andreas Kohlbecker wrote:
> The Method `CdmUtils.getFolderSeperator()` is completely redundant since `File.separator... - 12:14 PM bug #8189: Allow configuration of 'user.home' via the spring environment
- Andreas Kohlbecker wrote:
> > The test ConfigFileUtilTest.testGetFolderSeperator does not work anymore on windows sy... - 01:42 PM Revision 182b1e60 (taxeditor): ref #8293: distribution details view uses the same status pref as distr. editor
- 01:19 PM feature request #8257 (Feedback): Remove factory methods for term node creation
- should be fixed now and can be closed I guess
- 01:17 PM feature request #8257 (Resolved): Remove factory methods for term node creation
- Applied in changeset commit:cdmlib|179a846773ab7eec76e786dfafe5a84cdbdf7103.
- 01:17 PM Revision 179a8467 (cdmlib): fix #8257 remove remaining deprecated FeatureNode.NewInstance method
- 11:04 AM task #5856 (New): [DISCUSS] Consider implemeting additional name relationships
- Needs to be discussed. No action needed before.
- 10:48 AM feature request #8293: Distribution preferences for details view should be serverside preferences
- But in a way you are right and the details view when used via distribution editor and the distribution editor itself ...
- 10:45 AM feature request #8293: Distribution preferences for details view should be serverside preferences
- I didn't say we want 2, but we want it serverside, currently this is not yet the case. It should be 1 predicate I gue...
- 09:53 AM feature request #8293 (Feedback): Distribution preferences for details view should be serverside preferences
- do we really want to have two different preferences? one for the distribution editor,one for the details view?
- 09:34 AM Revision 8e653279 (cdmlib): overwrite equals for taxonnodeDto
06/04/2019
- 10:22 PM Revision 9f2fa4a8 (cdmlib): ref #8047: configurable display of status in drop down, new enum and predicate
- 05:56 PM bug #8231 (Feedback): Name relation non
- the above problem has now been solved in #8321. I think we can also close this issue here, or did I miss something?
- 05:54 PM bug #8321: Namepage shows wrong taxa as related to the name
- please review
- 05:53 PM bug #8321 (Resolved): Namepage shows wrong taxa as related to the name
- Applied in changeset commit:cdm-dataportal|fb308159d88b11b398e104e0e38231407049a7fe.
- 05:52 PM Revision fb308159 (cdm-dataportal): fix #8321 finding taxa for a given name by matching whith the whole titleCache
- 05:48 PM Revision 11847891 (taxeditor): ref #8047: configurable display of status in drop down
- 05:46 PM task #3560: Withheld unpublished taxa from webservice used in E+M dataportal
- I cleaned the ticket up as requested
- 12:46 PM task #3560: Withheld unpublished taxa from webservice used in E+M dataportal
- Be aware that this ticket has already status resolved in 5.1. It's task description should not be enlarged anymore if...
- 12:44 PM task #3560: Withheld unpublished taxa from webservice used in E+M dataportal
- Also this ticket is only about **E+M** data portal relevant webservices. For other webservices please use #7492.
- 12:40 PM task #3560: Withheld unpublished taxa from webservice used in E+M dataportal
- Can you please adapt the new information on *doPageByRestrictions* to the logic of the rest of the list? In general w...
- 05:41 PM discussion #6678: [DISCUSS] How to correctly show name relationship "orth. var." in dataportal
- Sorry for misusing this ticket
- 03:29 PM discussion #6678 (In Progress): [DISCUSS] How to correctly show name relationship "orth. var." in dataportal
- 03:29 PM discussion #6678: [DISCUSS] How to correctly show name relationship "orth. var." in dataportal
- Andreas Kohlbecker wrote:
> please answer to the questions in comment 3
This is a DISCUSS ticket not an implement... - 05:39 PM bug #8328 (Closed): Unpublished record visible in Portal if related name is published
- Unpublished record visible in Portal if related name is published.
 - 05:26 PM task #5857 (In Progress): show nomenclatural status for for representations of TaxonName
- we (Andreas & Henning) decided to move the footnote in front of the relationship label depending on direction of the ...
- 05:24 PM bug #8327 (Duplicate): record with publication date is competing with curation status, set to preparation or curation
- Example from the Test system:
Basionym: Fragilaria santaremensis = published (Vaadin UI set to published)
New com... - 03:54 PM Revision 1faab189 (taxeditor): Revert "mend"
- This reverts commit 80379c19934c880a3631e83ffec07ef9215b2378.
- 03:46 PM Revision 80379c19 (taxeditor): mend
- display of status in drop down according to preference
- 03:44 PM Revision be268375 (taxeditor): distributioneditor: display of status in combo box concerning preference
- 03:39 PM bug #7953: Book in BookSeries: incomplete titleCache misses series title
- I can only repeat what I wrote in #note-6 . Current understanding of PrintSeries is not that it is part of the titleC...
- 03:17 PM bug #8326 (Closed): update labels for is blocking name and is isonym
- nur fehlt bei blocking name und isonym das „is „ wodurch auch Verwirrung entsteht. Da braucht es wohl ein Updatescrip...
- 02:25 PM Revision f45c232d (taxeditor): merge hotfix5.7.3 into develop
- 01:35 PM Revision cb42825f (taxeditor): Merge branch 'hotfix/5.7.3'
- 12:40 PM Revision 67c8f20e (cdmlib): ref #8321 implementing page by restriction method to allow for flexible web service queries, also protecting unpublished taxa and names ref #3560
- 11:40 AM bug #8315 (Resolved): Parsing existing references with inReferences changes the inReference
- Applied in changeset commit:taxeditor|34965c7d9a020910d8a3e36ed3299fb05936f47b.
nach hotfix/5.7.3 gecherry-picked - 11:36 AM bug #8315 (Feedback): Parsing existing references with inReferences changes the inReference
- Hmm, difficult to test, some first tests worked fine. I think we can close it and cherry pick + change version.
- 11:38 AM Revision 34965c7d (taxeditor): fix #8315: fix Parser in TaxEditor to avoid inReference change of existing references
- 11:11 AM feature request #8283 (Feedback): Allow adding media to terms in taxeditor
- 11:10 AM feature request #8283: Allow adding media to terms in taxeditor
- Andreas Müller wrote:
> Or was this code only from the cherry picking? A bit confusing.
Yes this seems to be the ... - 11:08 AM feature request #8283: Allow adding media to terms in taxeditor
- Or was this code only from the cherry picking? A bit confusing.
- 11:07 AM feature request #8283: Allow adding media to terms in taxeditor
- PP just added some more code. Could you check if this also needs to be cherry picked.
Revert milestone as not sure i... - 11:03 AM feature request #8283 (Resolved): Allow adding media to terms in taxeditor
- Applied in changeset commit:taxeditor|909326e9b74be422e80071325ae93e53102404a5.
- 10:47 AM feature request #8283: Allow adding media to terms in taxeditor
- cherry-picked to hotfix/5.7.3
- 10:16 AM feature request #8283: Allow adding media to terms in taxeditor
- Andreas Müller wrote:
> The data may got lost the following way.
>
> * Open term
> * add media
> * open referen... - 10:15 AM feature request #8283: Allow adding media to terms in taxeditor
- Katja, can you please cherry pick however. The above problems are minor issues and the media are not used much anyway...
- 09:54 AM feature request #8283: Allow adding media to terms in taxeditor
- With the current implementation it is not possible to switch between advanced and simple view but sometimes it is ess...
- 09:47 AM feature request #8283 (Feedback): Allow adding media to terms in taxeditor
- The data may got lost the following way.
* Open term
* add media
* open referencing objects view (-> Details Vie... - 11:04 AM bug #8316: Endless loop when editing name in source of distribution
- this issue is cherry-picked to hotfix5.7.3, therefore change the milestone to 5.7
- 10:28 AM bug #8316: Endless loop when editing name in source of distribution
- Andreas Müller wrote:
> Please also check if this is related to #8283#note-4
this seems to be an older problem, t... - 10:17 AM bug #8316: Endless loop when editing name in source of distribution
- Please also check if this is related to #8283#note-4
- 09:31 AM bug #8316 (Feedback): Endless loop when editing name in source of distribution
- The endless loop does now not show up anymore.
But after closing the dialog the supplemental data view does not get ... - 11:03 AM bug #8260: Details and Supplemental Data View do not save the expansion state of sections
- maybe we should keep the milestone here at this is not yet fully fixed.
- 10:47 AM bug #8260: Details and Supplemental Data View do not save the expansion state of sections
- cherry-picked to hotfix/5.7.3
- 10:33 AM bug #8260: Details and Supplemental Data View do not save the expansion state of sections
- The above issues are minor. Katja, can you still cherry pick the up-to-now changes as it already improves the situati...
- 10:31 AM bug #8260 (Feedback): Details and Supplemental Data View do not save the expansion state of sections
- In most cases it seems to work fine. But it does not seem to work for ScientificName and Authorship which always seem...
- 10:57 AM bug #8229 (Closed): reload of the bulkeditor does not work correctly
- 10:53 AM bug #8229: reload of the bulkeditor does not work correctly
- cherry-picked to hotfix/5.7.3
- 10:47 AM bug #8229 (Feedback): reload of the bulkeditor does not work correctly
- Seems to work. Can you still cherry pick and change the milestone?
- 10:48 AM Revision 5920a5e8 (taxeditor): ref #8229: update correct property path for search in name and taxon bulkeditor
- 10:46 AM Revision 5bb1eb99 (taxeditor): Fix expansion state preference for details and suppData view
- 10:46 AM Revision 909326e9 (taxeditor): fix #8283 Add media section to term details view
- 10:45 AM Revision 41baf435 (taxeditor): ref #8260: save expansion state for supplemental data
- 10:45 AM Revision 175fef3e (taxeditor): ref #8260: save expansion state for supplemental data
- 10:39 AM Revision 60aeda7c (taxeditor): fix name details view local pref saving
- 10:14 AM Revision 8e382a25 (cdmlib): add rollback check in ExcelImportBase
- 10:10 AM Revision e741a77e (cdmlib): fix compilation error in BaseListController
- 09:45 AM Revision 942a8769 (taxeditor): ref #8047: show symbol and label in drop down of distribution editor
- 09:07 AM Revision d18384a7 (cdmlib): fix test as cdm light creates all tables now
- 07:21 AM bug #8252 (Closed): reference ellypsis must not be applied to all reference types
- The issue of bibliographic authors being displayed for the nomenclatural reference is also fixed now.
06/03/2019
- 08:04 PM Revision 1fac05b8 (cdmlib-apps): cleanup
- 08:03 PM Revision 4ea92c86 (cdmlib-apps): fix VerbatimTimePeriod compile error in IAPT import
- 05:25 PM Revision 2b4d0842 (cdmlib): generic webservice method for all cdm entitiy list controllers to search by Restriction
- 04:49 PM Revision 51f12ba4 (cdmlib-apps): ref #2937 fix GermanSL import in a way that it does not throw exceptions
- 04:05 PM feature request #8320: Links to reference page as appendend icon instead of having the whole citation as link
- Discussion ended, will now implement ....
- 04:04 PM feature request #8320: Links to reference page as appendend icon instead of having the whole citation as link
- posting Norberts answer received by email:
"I agree too,
Norbert" - 01:32 PM feature request #8320: Links to reference page as appendend icon instead of having the whole citation as link
- Wolf-Henning Kusber wrote:
> The icon is fine, we do not need the entire string linked.
I also agree. We should t... - 03:58 PM feature request #8325 (In Progress): Create CDM Instance with all CDM core terms
- According to decisions made in https://wiki.bgbm.org/bdinotes/index.php?title=BDI_237 and https://wiki.bgbm.org/bdino...
- 01:55 PM feature request #3472: Update name in source data when changing an accepted taxon into a synonym
- We finally decided to implement it such for E+M, see comments in #3982
- 01:54 PM feature request #3982: Update name in source data when moving a Description to another Taxon
- for affected methods see also #3472
- 01:53 PM feature request #3982: Update name in source data when moving a Description to another Taxon
- Finally I understood that this was already the case in the BM WebEditor. At the same time we agree that this feature ...
- 01:46 PM feature request #8324 (New): Make taxon titleCache in name details view a CdmPreference
- The taxon titlecache is usually not needed as it is shown in the section label already and the usecases are very rare...
- 01:43 PM feature request #8323 (Feedback): Make nom.status and rank lists a CdmPreference
- Currently it is only possible to define available nomenclatural status and rank in the local preferences and there it...
- 01:03 PM Revision c6e0f47e (cdmlib): ref #8322: adapt TaxonNodeDtoComparator to compare the names by taggedTitle
- 12:57 PM feature request #8322 (Resolved): add sortindex to cdm light export
- For better handling in follow up application it is necessary to calculate the sortindex for the taxon.
- 11:21 AM feature request #8283: Allow adding media to terms in taxeditor
- should we add to HFX?
- 11:20 AM bug #8260: Details and Supplemental Data View do not save the expansion state of sections
- Should we add to HFX?
- 11:19 AM bug #8229 (Resolved): reload of the bulkeditor does not work correctly
- should we add to HFX?
- 11:03 AM bug #8315: Parsing existing references with inReferences changes the inReference
- Think about including into HFX for 5.7
- 10:59 AM feature request #8264 (Closed): excluded and excluded notes in cdmlight export
- 08:04 AM feature request #8317: Omit ex-author if ex-author=author
- This needs to be fixed the vaadin TaxonNamePopupEditor which sets the ex-authors automatically depending on the nomen...
05/31/2019
- 10:56 PM bug #8231 (In Progress): Name relation non
- Henning you you hit the nail on the head when you wrote: "Why? ... a link by the name string excluding the authors."
... - 10:47 PM bug #8231: Name relation non
- Copying the follow up to this ticket from #8321 to here:
----
https://www.phycobank.org/cdm_dataportal/name/3... - 10:40 PM bug #8231: Name relation non
- Sorry Henning I closed this issue erroneously. The comment !#4 was meant for another ticket. I will edit this comment...
- 09:15 PM bug #8231: Name relation non
- new issue for discussion of the described site effects #8321
- 05:58 PM bug #8231 (Closed): Name relation non
- ~~I created a tickt (#8320) to discuss the linking of references.~~
~~Closing this issue as there is nothing else ... - 10:31 PM task #5857: show nomenclatural status for for representations of TaxonName
- I don't quite understand the problem.
Navicula adminensis is validating Navicula adminii and this validation is d... - 06:13 PM task #5857: show nomenclatural status for for representations of TaxonName
- #15
is changed, but not in a proper way.
The articles are linked to the validating name. The articles refer to the ... - 06:04 PM task #5857: show nomenclatural status for for representations of TaxonName
- sorry I missed, comment 15, will respond again later
- 06:01 PM task #5857: show nomenclatural status for for representations of TaxonName
- so can we close this issue or are you still testing?
- 01:54 PM task #5857: show nomenclatural status for for representations of TaxonName
- The following output is fine:
 - 01:52 PM task #5857: show nomenclatural status for for representations of TaxonName
- The following output is perfect:
 - 01:43 PM task #5857 (Feedback): show nomenclatural status for for representations of TaxonName
- Review: The articles are shown, but for users the content migth be confusing.
How to read this?
Navicula adminii ... - 12:35 PM task #5857: show nomenclatural status for for representations of TaxonName
- this has been solved completely, please review
- 10:42 AM task #5857 (Resolved): show nomenclatural status for for representations of TaxonName
- Applied in changeset commit:cdm-dataportal|a7560a186de2e5673e04f4a1166ad1077eb7c7d5.
- 09:13 PM bug #8321 (Closed): Namepage shows wrong taxa as related to the name
- Follow up to ticket bug #8231
https://www.phycobank.org/cdm_dataportal/name/39908030-32e3-400c-b6c0-91aeda1e810a... - 06:15 PM feature request #8320: Links to reference page as appendend icon instead of having the whole citation as link
- The icon is fine, we do not need the entire string linked.
- 05:57 PM feature request #8320: Links to reference page as appendend icon instead of having the whole citation as link
- The most important questions to answer are:
1. Is a appended icon prominent enough, so that users don't oversee th... - 05:54 PM feature request #8320 (Closed): Links to reference page as appendend icon instead of having the whole citation as link
- Currently the portal creates links to references by turning the whole reference string into a link. Since citation st...
- 05:58 PM feature request #7975 (Closed): Implement a block to display name relations
- I created a ticket (#8320) to discuss the linking of references.
Closing this issue as there is nothing else to do... - 02:13 PM feature request #7975 (Feedback): Implement a block to display name relations
- Review: the bibliographic authors are used. This part is resolved, fine.
"Turland, N.J., Wiersema, J.H., Barrie, F... - 12:34 PM feature request #7975: Implement a block to display name relations
- now the bibliographic authors are being used, please review again.
The missing separating character between Title ... - 02:07 PM Revision 553606dc (cdm-dataportal): removing service mock which has been applied for hotfix 5.7.3
- 02:06 PM Revision d3d551d8 (cdm-dataportal): Merge tag '5.7.3' into develop
- tagging hotfix 5.7.3
- 02:06 PM Revision 4482562b (cdm-dataportal): Merge branch 'hotfix/5.7.3'
- 02:06 PM Revision 6066fc75 (cdm-dataportal): mocking missing name/typeDesignationStatusFilterTerms for phycobank
- 01:20 PM Revision 917d9aaf (cdm-dataportal): Merge tag '5.7.2' into develop
- tagging hotfix 5.7.2
- 01:20 PM Revision 4b11a2b0 (cdm-dataportal): Merge branch 'hotfix/5.7.2'
- 01:19 PM Revision f3d52fe7 (cdm-dataportal): Merge branch 'develop' into hotfix/5.7.2
- 12:36 PM feature request #8318 (Closed): TaxonName processing for taggedFullTitle
- done!
- 12:36 PM feature request #8314 (Closed): TaxonName provides the FullTitleCache as TaggedText
- completed
- 09:24 AM feature request #8314 (Resolved): TaxonName provides the FullTitleCache as TaggedText
- Applied in changeset commit:cdmlib|f537247b88e6017e313ac332745cfc3df27b5f88.
- 10:41 AM Revision 222784c5 (cdm-dataportal): ref #5857 showing show citation, rule considered, and citation of nomenclatural status in footnotes, adapting tests
- 09:24 AM feature request #8319 (Closed): NomenclaturalStatus webservice implemented
- 09:24 AM feature request #8319 (Resolved): NomenclaturalStatus webservice implemented
- Applied in changeset commit:cdmlib|49fdbd9a198c03df49cf0df3a41927d82a16715b.
- 09:14 AM feature request #8319 (Closed): NomenclaturalStatus webservice implemented
- for #5857 it is required to be able to get NomenclaturalStatus objects from vi the web service. This is especially th...
- 09:24 AM Revision 16211a64 (cdmlib): ref #5857, ref #8319 adding TypedEntityRefernces to nom status TaggedText and fixing json serialization for EntitiyReferences in taxon.taggedTitle processing
- 09:24 AM Revision 49fdbd9a (cdmlib): fix #8319 NomenclaturalStatus webservice and according service methods implemented
- 09:24 AM Revision f537247b (cdmlib): fix #8314 implementing taxonname.taggedFullTitle for model class and in web service controller
05/29/2019
- 09:04 PM Revision f8d5d6d9 (cdm-dataportal): ref #7975 relationship footnotes moved to relationship sign/label
- 07:54 PM Revision a7560a18 (cdm-dataportal): fix #5857 implementing display of nomenclatural status data in name page, registration page
- 07:45 PM Revision de7bcbcc (cdm-dataportal): ref #8318 processing of taxonname.taggedFullTitle for name rendering
- 07:44 PM feature request #8318 (In Progress): TaxonName processing for taggedFullTitle
- 07:37 PM feature request #8318 (Closed): TaxonName processing for taggedFullTitle
- The TaxonName.taggedFullTitle needs different processing than the Taxon.taggedTitle
- 05:42 PM feature request #8317 (Closed): Omit ex-author if ex-author=author
- If and only if ex author = author the ex author is not included into the author teams due to the ICN 46.10.
This is ... - 02:36 PM task #5857: show nomenclatural status for for representations of TaxonName
- no need to discuss this with the users. The display of the nom status can be configured via the "Name render templates"
- 01:59 PM Revision 5a4e6f50 (cdm-dataportal): fixing titlecache usage for name rel footnotes - adapting tests
- 01:58 PM Revision 6d0b5bc3 (cdm-dataportal): ref #8304 adapting test cases
- 01:52 PM Revision b648739e (cdm-dataportal): ref #8304 fixing problems with page arg evaluation
- 01:24 PM Revision 4765e3e9 (taxeditor): fix #8316: fix endless loop when editing name in source
- 01:16 PM Revision 9393e4d3 (taxeditor): Updated version in pom / project files to taxeditor version : 5.7.3 and cdmlib version : 5.7.0
- 01:04 PM Revision 50737bf6 (cdmlib): ref #8273: check for DNA data for provided biocase provider
- 01:00 PM Revision 1195e0cc (cdmlib): minor
- 12:59 PM Revision 442916a4 (cdmlib): ref #8182: adapt occurrence DTOs to use them in details page of blast result
- 12:52 PM Revision bfaa6a16 (cdmlib): ref #8045: add toString() to the preference enums
- 12:41 PM bug #8316: Endless loop when editing name in source of distribution
- please review
- 12:30 PM bug #8316 (Resolved): Endless loop when editing name in source of distribution
- Applied in changeset commit:taxeditor|9b4eaf57527243baf4b517d19f90b3c6a4f3d18c.
- 12:28 PM bug #8316 (Closed): Endless loop when editing name in source of distribution
- mail AM:
also bei nameUsedInSource bekomme ich das weiterhin regelmäßig, spätestens beim 2. oder 3. Mal. Kannst du... - 12:40 PM Revision 0f9976d6 (cdm-dataportal): waiting for page to load
- 12:29 PM Revision 9b4eaf57 (taxeditor): fix #8316: fix endless loop when editing name in source
- 11:51 AM Revision d3276246 (cdmlib): ref #8248 Add term vocbulary import test + code cleanup
- 11:02 AM bug #8315: Parsing existing references with inReferences changes the inReference
- please review
- 10:19 AM bug #8315: Parsing existing references with inReferences changes the inReference
- Should I review?
- 09:19 AM bug #8315 (Resolved): Parsing existing references with inReferences changes the inReference
- Applied in changeset commit:taxeditor|c9d22df2150151a1181ff5c8b8167e1ff5896a73.
- 09:18 AM bug #8315: Parsing existing references with inReferences changes the inReference
- This problem appears because the parser checks whether the inreference already exists in DB and when one or more refe...
- 09:13 AM bug #8315 (Closed): Parsing existing references with inReferences changes the inReference
- mail Mareike Liese:
Hallo,
leider kann ich in der Datenbank nichts speichern.
Ich hab über die Art auf Enter g... - 10:37 AM Revision f8ea1d2f (cdmlib): ref #8248 Fix property string access
- 10:37 AM bug #6523 (Feedback): Correct display of misspellings in synonymy
- ich nehme mal Henning hier mit 'rein und übergebe ihm das Ticket.
@Henning: Kannst du dir bitte die beiden Fragen... - 09:41 AM Revision 0a5c2ac4 (cdmlib): ref #6774 Init export configurator
- 09:19 AM Revision c9d22df2 (taxeditor): fix #8315: fix Parser in TaxEditor to avoid inReference change of existing references
- 08:17 AM Revision d7bdaf08 (taxeditor): ref #6774 Fix term treee export via context menu
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