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From 05/19/2019 to 06/17/2019

06/17/2019

01:21 PM bug #8313 (Closed): Multiple categorical data get deleted when clicked on in Character Matrix
Tilo tested on nightly. Works as expected. Patrick Plitzner
01:13 PM bug #8313 (Resolved): Multiple categorical data get deleted when clicked on in Character Matrix
Fixed with commit:taxeditor|270642049c506384a9dc6f4d398e5fdabe4ddf47 Patrick Plitzner

06/13/2019

09:30 AM bug #8331 (New): Editor is unresponsive after sec reference replacement
mail WB:
Betreff: TaxEditor hängt nach Subtree Sec-Replacement
Hallo,
inzwischen gemerkt – tut er nicht, aber:...
Katja Luther

06/12/2019

12:41 PM bug #8260 (Resolved): Details and Supplemental Data View do not save the expansion state of sections
This should now be fixed. The state of all subsections was not saved before. Patrick Plitzner
10:30 AM feature request #8283: Allow adding media to terms in taxeditor
Andreas Müller wrote:
> The data may got lost the following way.
>
> * Open term
> * add media
> * open referen...
Patrick Plitzner
10:16 AM feature request #8283: Allow adding media to terms in taxeditor
Andreas Müller wrote:
> PP just added some more code. Could you check if this also needs to be cherry picked.
> Rev...
Patrick Plitzner
10:26 AM feature request #8257 (Closed): Remove factory methods for term node creation
Patrick Plitzner

06/11/2019

04:25 PM feature request #8293: Distribution preferences for details view should be serverside preferences
now, the vocabulary defined in the distribution editor preference is used for the area filter Katja Luther
03:03 PM feature request #8293 (In Progress): Distribution preferences for details view should be serverside preferences
Katja Luther
03:02 PM feature request #8293: Distribution preferences for details view should be serverside preferences
now the distribution status comes from the same preference and the input of the combo box is updated depending on the... Katja Luther
02:29 PM feature request #8323 (Resolved): Make nom.status and rank lists a CdmPreference
please review Katja Luther
12:11 PM feature request #8323 (In Progress): Make nom.status and rank lists a CdmPreference
Katja Luther

06/07/2019

05:58 PM feature request #8016 (Closed): Registration page: subheadline with event type
Andreas Kohlbecker
05:16 PM feature request #8016: Registration page: subheadline with event type
Ja, jetzt sieht es gut aus! Wolf-Henning Kusber
05:06 PM feature request #8016: Registration page: subheadline with event type
Problem gelöst: http://test.e-taxonomy.eu/dataportal/preview/phycobank/cdm_dataportal/registration/http%253A%252F%252... Andreas Kohlbecker
09:40 AM feature request #8016: Registration page: subheadline with event type
Wording is fine :)
Remaining issue: subheadline is not between identifier and name, but displaced within a nomencl...
Wolf-Henning Kusber
08:56 AM feature request #8016: Registration page: subheadline with event type
All suggestions and improvements are applied. Andreas Kohlbecker
04:24 PM feature request #7975: Implement a block to display name relations
In the developer standup today we almost already decided for adding an enumeration field to `NameRelationship` and to... Andreas Kohlbecker
09:17 AM feature request #7975: Implement a block to display name relations
Thanks, Andreas K.
@ Andreas M.: please keep in mind that some rules and/or article numbers of the ICN may change. I...
Wolf-Henning Kusber
09:05 AM feature request #7975 (Feedback): Implement a block to display name relations
I think that adding a second reference to the `NameRelationship` and to `NomenclaturalStatus` would not hurt but woul... Andreas Kohlbecker

06/06/2019

07:03 PM feature request #7975: Implement a block to display name relations
"the reference of a nom. status or name relationship is meant to say who says that this status/relationship exists. I... Wolf-Henning Kusber
02:13 PM feature request #7975: Implement a block to display name relations
As discussed the reference of a nom. status or name relationship is meant to say who says that this status/relationsh... Andreas Müller
06:42 PM feature request #8016: Registration page: subheadline with event type
Review:
Example http://phycobank.org/100005
Event: New name & new taxon & new nomeclatural type
Issue 1: nomecla...
Wolf-Henning Kusber
03:11 PM feature request #8016: Registration page: subheadline with event type
ready for review Andreas Kohlbecker
03:10 PM feature request #8016 (Resolved): Registration page: subheadline with event type
Applied in changeset commit:cdm-dataportal|b90ef61802d5882f5cf1b0b5a1c6cee8c32e3f61. Andreas Kohlbecker
06:00 PM bug #8287 (In Progress): RegistrationServiceImpl.page( .... Collection<UUID> typeDesignationStatusUuids ... ) fails when NULL and UUIDs are passed
Andreas Kohlbecker
05:58 PM feature request #8330 (Closed): RegistrationDao search method
Due to the problems reported in #8287 a dedicated dao search method is needed. This method first of all needs to sup... Andreas Kohlbecker
02:34 PM bug #8329: Multiple representations exception when adding name relationship with already existing author
If adding another name (without author Mill.) via relationship the problem does not appear while using Abies alba Mil... Andreas Müller
02:29 PM bug #8329 (Worksforme): Multiple representations exception when adding name relationship with already existing author
In E+M test I tried to add a name relationship to Pinus picea (synonym for Abies alba) via Name editor.
I added na...
Andreas Müller

06/05/2019

03:03 PM feature request #7438 (Closed): implement citation suggestion in dataportal
Works as expected. Open new ticket if details need to be changed Andreas Müller
02:31 PM task #8118: Update MySQL drivers
https://dev.mysql.com/doc/refman/8.0/en/time-zone-support.html Andreas Müller
02:04 PM bug #8315: Parsing existing references with inReferences changes the inReference
moved accidentaly back to 5.8 Andreas Müller
02:04 PM bug #8315 (Closed): Parsing existing references with inReferences changes the inReference
Andreas Müller
01:54 PM bug #8189: Allow configuration of 'user.home' via the spring environment
Andreas Müller wrote:
> Andreas Kohlbecker wrote:
> > now that the changes made for this ticket are no longer causi...
Andreas Kohlbecker
01:31 PM bug #8189: Allow configuration of 'user.home' via the spring environment
Andreas Kohlbecker wrote:
> now that the changes made for this ticket are no longer causing any problems I will do t...
Andreas Müller
12:25 PM bug #8189: Allow configuration of 'user.home' via the spring environment
Therefore I do not agree to remove the method or to remove the MUST_EXIST_FILE (but we may remove if there is a bette... Andreas Müller
12:23 PM bug #8189: Allow configuration of 'user.home' via the spring environment
Andreas Kohlbecker wrote:
> The Method `CdmUtils.getFolderSeperator()` is completely redundant since `File.separator...
Andreas Müller
12:14 PM bug #8189: Allow configuration of 'user.home' via the spring environment
Andreas Kohlbecker wrote:
> > The test ConfigFileUtilTest.testGetFolderSeperator does not work anymore on windows sy...
Andreas Müller
01:19 PM feature request #8257 (Feedback): Remove factory methods for term node creation
should be fixed now and can be closed I guess Andreas Müller
01:17 PM feature request #8257 (Resolved): Remove factory methods for term node creation
Applied in changeset commit:cdmlib|179a846773ab7eec76e786dfafe5a84cdbdf7103. Andreas Müller
11:04 AM task #5856 (New): [DISCUSS] Consider implemeting additional name relationships
Needs to be discussed. No action needed before. Andreas Müller
10:48 AM feature request #8293: Distribution preferences for details view should be serverside preferences
But in a way you are right and the details view when used via distribution editor and the distribution editor itself ... Andreas Müller
10:45 AM feature request #8293: Distribution preferences for details view should be serverside preferences
I didn't say we want 2, but we want it serverside, currently this is not yet the case. It should be 1 predicate I gue... Andreas Müller
09:53 AM feature request #8293 (Feedback): Distribution preferences for details view should be serverside preferences
do we really want to have two different preferences? one for the distribution editor,one for the details view? Katja Luther

06/04/2019

05:56 PM bug #8231 (Feedback): Name relation non
the above problem has now been solved in #8321. I think we can also close this issue here, or did I miss something? Andreas Kohlbecker
05:54 PM bug #8321: Namepage shows wrong taxa as related to the name
please review Andreas Kohlbecker
05:53 PM bug #8321 (Resolved): Namepage shows wrong taxa as related to the name
Applied in changeset commit:cdm-dataportal|fb308159d88b11b398e104e0e38231407049a7fe. Andreas Kohlbecker
05:46 PM task #3560: Withheld unpublished taxa from webservice used in E+M dataportal
I cleaned the ticket up as requested Andreas Kohlbecker
12:46 PM task #3560: Withheld unpublished taxa from webservice used in E+M dataportal
Be aware that this ticket has already status resolved in 5.1. It's task description should not be enlarged anymore if... Andreas Müller
12:44 PM task #3560: Withheld unpublished taxa from webservice used in E+M dataportal
Also this ticket is only about **E+M** data portal relevant webservices. For other webservices please use #7492. Andreas Müller
12:40 PM task #3560: Withheld unpublished taxa from webservice used in E+M dataportal
Can you please adapt the new information on *doPageByRestrictions* to the logic of the rest of the list? In general w... Andreas Müller
05:41 PM discussion #6678: [DISCUSS] How to correctly show name relationship "orth. var." in dataportal
Sorry for misusing this ticket Andreas Kohlbecker
03:29 PM discussion #6678 (In Progress): [DISCUSS] How to correctly show name relationship "orth. var." in dataportal
Andreas Müller
03:29 PM discussion #6678: [DISCUSS] How to correctly show name relationship "orth. var." in dataportal
Andreas Kohlbecker wrote:
> please answer to the questions in comment 3
This is a DISCUSS ticket not an implement...
Andreas Müller
05:39 PM bug #8328 (Closed): Unpublished record visible in Portal if related name is published
Unpublished record visible in Portal if related name is published.
![](picture973-1.png)
Wolf-Henning Kusber
05:26 PM task #5857 (In Progress): show nomenclatural status for for representations of TaxonName
we (Andreas & Henning) decided to move the footnote in front of the relationship label depending on direction of the ... Andreas Kohlbecker
05:24 PM bug #8327 (Duplicate): record with publication date is competing with curation status, set to preparation or curation
Example from the Test system:
Basionym: Fragilaria santaremensis = published (Vaadin UI set to published)
New com...
Wolf-Henning Kusber
03:39 PM bug #7953: Book in BookSeries: incomplete titleCache misses series title
I can only repeat what I wrote in #note-6 . Current understanding of PrintSeries is not that it is part of the titleC... Andreas Müller
03:17 PM bug #8326 (Closed): update labels for is blocking name and is isonym
nur fehlt bei blocking name und isonym das „is „ wodurch auch Verwirrung entsteht. Da braucht es wohl ein Updatescrip... Andreas Müller
11:40 AM bug #8315 (Resolved): Parsing existing references with inReferences changes the inReference
Applied in changeset commit:taxeditor|34965c7d9a020910d8a3e36ed3299fb05936f47b.
nach hotfix/5.7.3 gecherry-picked
Katja Luther
11:36 AM bug #8315 (Feedback): Parsing existing references with inReferences changes the inReference
Hmm, difficult to test, some first tests worked fine. I think we can close it and cherry pick + change version. Andreas Müller
11:11 AM feature request #8283 (Feedback): Allow adding media to terms in taxeditor
Katja Luther
11:10 AM feature request #8283: Allow adding media to terms in taxeditor
Andreas Müller wrote:
> Or was this code only from the cherry picking? A bit confusing.
Yes this seems to be the ...
Katja Luther
11:08 AM feature request #8283: Allow adding media to terms in taxeditor
Or was this code only from the cherry picking? A bit confusing. Andreas Müller
11:07 AM feature request #8283: Allow adding media to terms in taxeditor
PP just added some more code. Could you check if this also needs to be cherry picked.
Revert milestone as not sure i...
Andreas Müller
11:03 AM feature request #8283 (Resolved): Allow adding media to terms in taxeditor
Applied in changeset commit:taxeditor|909326e9b74be422e80071325ae93e53102404a5. Patrick Plitzner
10:47 AM feature request #8283: Allow adding media to terms in taxeditor
cherry-picked to hotfix/5.7.3 Katja Luther
10:16 AM feature request #8283: Allow adding media to terms in taxeditor
Andreas Müller wrote:
> The data may got lost the following way.
>
> * Open term
> * add media
> * open referen...
Andreas Müller
10:15 AM feature request #8283: Allow adding media to terms in taxeditor
Katja, can you please cherry pick however. The above problems are minor issues and the media are not used much anyway... Andreas Müller
09:54 AM feature request #8283: Allow adding media to terms in taxeditor
With the current implementation it is not possible to switch between advanced and simple view but sometimes it is ess... Andreas Müller
09:47 AM feature request #8283 (Feedback): Allow adding media to terms in taxeditor
The data may got lost the following way.
* Open term
* add media
* open referencing objects view (-> Details Vie...
Andreas Müller
11:04 AM bug #8316: Endless loop when editing name in source of distribution
this issue is cherry-picked to hotfix5.7.3, therefore change the milestone to 5.7 Katja Luther
10:28 AM bug #8316: Endless loop when editing name in source of distribution
Andreas Müller wrote:
> Please also check if this is related to #8283#note-4
this seems to be an older problem, t...
Katja Luther
10:17 AM bug #8316: Endless loop when editing name in source of distribution
Please also check if this is related to #8283#note-4 Andreas Müller
09:31 AM bug #8316 (Feedback): Endless loop when editing name in source of distribution
The endless loop does now not show up anymore.
But after closing the dialog the supplemental data view does not get ...
Andreas Müller
11:03 AM bug #8260: Details and Supplemental Data View do not save the expansion state of sections
maybe we should keep the milestone here at this is not yet fully fixed. Andreas Müller
10:47 AM bug #8260: Details and Supplemental Data View do not save the expansion state of sections
cherry-picked to hotfix/5.7.3 Katja Luther
10:33 AM bug #8260: Details and Supplemental Data View do not save the expansion state of sections
The above issues are minor. Katja, can you still cherry pick the up-to-now changes as it already improves the situati... Andreas Müller
10:31 AM bug #8260 (Feedback): Details and Supplemental Data View do not save the expansion state of sections
In most cases it seems to work fine. But it does not seem to work for ScientificName and Authorship which always seem... Andreas Müller
10:57 AM bug #8229 (Closed): reload of the bulkeditor does not work correctly
Katja Luther
10:53 AM bug #8229: reload of the bulkeditor does not work correctly
cherry-picked to hotfix/5.7.3 Katja Luther
10:47 AM bug #8229 (Feedback): reload of the bulkeditor does not work correctly
Seems to work. Can you still cherry pick and change the milestone? Andreas Müller
07:21 AM bug #8252 (Closed): reference ellypsis must not be applied to all reference types
The issue of bibliographic authors being displayed for the nomenclatural reference is also fixed now. Andreas Kohlbecker

06/03/2019

04:05 PM feature request #8320: Links to reference page as appendend icon instead of having the whole citation as link
Discussion ended, will now implement .... Andreas Kohlbecker
04:04 PM feature request #8320: Links to reference page as appendend icon instead of having the whole citation as link
posting Norberts answer received by email:
"I agree too,
Norbert"
Andreas Kohlbecker
01:32 PM feature request #8320: Links to reference page as appendend icon instead of having the whole citation as link
Wolf-Henning Kusber wrote:
> The icon is fine, we do not need the entire string linked.
I also agree. We should t...
Andreas Müller
03:58 PM feature request #8325 (In Progress): Create CDM Instance with all CDM core terms
According to decisions made in https://wiki.bgbm.org/bdinotes/index.php?title=BDI_237 and https://wiki.bgbm.org/bdino... Andreas Müller
01:55 PM feature request #3472: Update name in source data when changing an accepted taxon into a synonym
We finally decided to implement it such for E+M, see comments in #3982 Andreas Müller
01:54 PM feature request #3982: Update name in source data when moving a Description to another Taxon
for affected methods see also #3472 Andreas Müller
01:53 PM feature request #3982: Update name in source data when moving a Description to another Taxon
Finally I understood that this was already the case in the BM WebEditor. At the same time we agree that this feature ... Andreas Müller
01:46 PM feature request #8324 (New): Make taxon titleCache in name details view a CdmPreference
The taxon titlecache is usually not needed as it is shown in the section label already and the usecases are very rare... Andreas Müller
01:43 PM feature request #8323 (Feedback): Make nom.status and rank lists a CdmPreference
Currently it is only possible to define available nomenclatural status and rank in the local preferences and there it... Andreas Müller
12:57 PM feature request #8322 (Resolved): add sortindex to cdm light export
For better handling in follow up application it is necessary to calculate the sortindex for the taxon. Katja Luther
11:21 AM feature request #8283: Allow adding media to terms in taxeditor
should we add to HFX? Andreas Müller
11:20 AM bug #8260: Details and Supplemental Data View do not save the expansion state of sections
Should we add to HFX? Andreas Müller
11:19 AM bug #8229 (Resolved): reload of the bulkeditor does not work correctly
should we add to HFX? Andreas Müller
11:03 AM bug #8315: Parsing existing references with inReferences changes the inReference
Think about including into HFX for 5.7 Andreas Müller
10:59 AM feature request #8264 (Closed): excluded and excluded notes in cdmlight export
Andreas Müller
08:04 AM feature request #8317: Omit ex-author if ex-author=author
This needs to be fixed the vaadin TaxonNamePopupEditor which sets the ex-authors automatically depending on the nomen... Andreas Kohlbecker

05/31/2019

10:56 PM bug #8231 (In Progress): Name relation non
Henning you you hit the nail on the head when you wrote: "Why? ... a link by the name string excluding the authors."
...
Andreas Kohlbecker
10:47 PM bug #8231: Name relation non
Copying the follow up to this ticket from #8321 to here:
----
https://www.phycobank.org/cdm_dataportal/name/3...
Andreas Kohlbecker
10:40 PM bug #8231: Name relation non
Sorry Henning I closed this issue erroneously. The comment !#4 was meant for another ticket. I will edit this comment... Andreas Kohlbecker
09:15 PM bug #8231: Name relation non
new issue for discussion of the described site effects #8321 Wolf-Henning Kusber
05:58 PM bug #8231 (Closed): Name relation non
~~I created a tickt (#8320) to discuss the linking of references.~~
~~Closing this issue as there is nothing else ...
Andreas Kohlbecker
10:31 PM task #5857: show nomenclatural status for for representations of TaxonName
I don't quite understand the problem.
Navicula adminensis is validating Navicula adminii and this validation is d...
Andreas Kohlbecker
06:13 PM task #5857: show nomenclatural status for for representations of TaxonName
#15
is changed, but not in a proper way.
The articles are linked to the validating name. The articles refer to the ...
Wolf-Henning Kusber
06:04 PM task #5857: show nomenclatural status for for representations of TaxonName
sorry I missed, comment 15, will respond again later Andreas Kohlbecker
06:01 PM task #5857: show nomenclatural status for for representations of TaxonName
so can we close this issue or are you still testing? Andreas Kohlbecker
01:54 PM task #5857: show nomenclatural status for for representations of TaxonName
The following output is fine:
![](picture890-1.png)
Wolf-Henning Kusber
01:52 PM task #5857: show nomenclatural status for for representations of TaxonName
The following output is perfect:
![](picture292-1.png)
Wolf-Henning Kusber
01:43 PM task #5857 (Feedback): show nomenclatural status for for representations of TaxonName
Review: The articles are shown, but for users the content migth be confusing.
How to read this?
Navicula adminii ...
Wolf-Henning Kusber
12:35 PM task #5857: show nomenclatural status for for representations of TaxonName
this has been solved completely, please review Andreas Kohlbecker
10:42 AM task #5857 (Resolved): show nomenclatural status for for representations of TaxonName
Applied in changeset commit:cdm-dataportal|a7560a186de2e5673e04f4a1166ad1077eb7c7d5. Andreas Kohlbecker
09:13 PM bug #8321 (Closed): Namepage shows wrong taxa as related to the name
Follow up to ticket bug #8231
https://www.phycobank.org/cdm_dataportal/name/39908030-32e3-400c-b6c0-91aeda1e810a...
Wolf-Henning Kusber
06:15 PM feature request #8320: Links to reference page as appendend icon instead of having the whole citation as link
The icon is fine, we do not need the entire string linked. Wolf-Henning Kusber
05:57 PM feature request #8320: Links to reference page as appendend icon instead of having the whole citation as link
The most important questions to answer are:
1. Is a appended icon prominent enough, so that users don't oversee th...
Andreas Kohlbecker
05:54 PM feature request #8320 (Closed): Links to reference page as appendend icon instead of having the whole citation as link
Currently the portal creates links to references by turning the whole reference string into a link. Since citation st... Andreas Kohlbecker
05:58 PM feature request #7975 (Closed): Implement a block to display name relations
I created a ticket (#8320) to discuss the linking of references.
Closing this issue as there is nothing else to do...
Andreas Kohlbecker
02:13 PM feature request #7975 (Feedback): Implement a block to display name relations
Review: the bibliographic authors are used. This part is resolved, fine.
"Turland, N.J., Wiersema, J.H., Barrie, F...
Wolf-Henning Kusber
12:34 PM feature request #7975: Implement a block to display name relations
now the bibliographic authors are being used, please review again.
The missing separating character between Title ...
Andreas Kohlbecker
12:36 PM feature request #8318 (Closed): TaxonName processing for taggedFullTitle
done! Andreas Kohlbecker
12:36 PM feature request #8314 (Closed): TaxonName provides the FullTitleCache as TaggedText
completed Andreas Kohlbecker
09:24 AM feature request #8314 (Resolved): TaxonName provides the FullTitleCache as TaggedText
Applied in changeset commit:cdmlib|f537247b88e6017e313ac332745cfc3df27b5f88. Andreas Kohlbecker
09:24 AM feature request #8319 (Closed): NomenclaturalStatus webservice implemented
Andreas Kohlbecker
09:24 AM feature request #8319 (Resolved): NomenclaturalStatus webservice implemented
Applied in changeset commit:cdmlib|49fdbd9a198c03df49cf0df3a41927d82a16715b. Andreas Kohlbecker
09:14 AM feature request #8319 (Closed): NomenclaturalStatus webservice implemented
for #5857 it is required to be able to get NomenclaturalStatus objects from vi the web service. This is especially th... Andreas Kohlbecker

05/29/2019

07:44 PM feature request #8318 (In Progress): TaxonName processing for taggedFullTitle
Andreas Kohlbecker
07:37 PM feature request #8318 (Closed): TaxonName processing for taggedFullTitle
The TaxonName.taggedFullTitle needs different processing than the Taxon.taggedTitle Andreas Kohlbecker
05:42 PM feature request #8317 (Closed): Omit ex-author if ex-author=author
If and only if ex author = author the ex author is not included into the author teams due to the ICN 46.10.
This is ...
Wolf-Henning Kusber
02:36 PM task #5857: show nomenclatural status for for representations of TaxonName
no need to discuss this with the users. The display of the nom status can be configured via the "Name render templates" Andreas Kohlbecker
12:41 PM bug #8316: Endless loop when editing name in source of distribution
please review Katja Luther
12:30 PM bug #8316 (Resolved): Endless loop when editing name in source of distribution
Applied in changeset commit:taxeditor|9b4eaf57527243baf4b517d19f90b3c6a4f3d18c. Katja Luther
12:28 PM bug #8316 (Closed): Endless loop when editing name in source of distribution
mail AM:
also bei nameUsedInSource bekomme ich das weiterhin regelmäßig, spätestens beim 2. oder 3. Mal. Kannst du...
Katja Luther
11:02 AM bug #8315: Parsing existing references with inReferences changes the inReference
please review Katja Luther
10:19 AM bug #8315: Parsing existing references with inReferences changes the inReference
Should I review? Andreas Müller
09:19 AM bug #8315 (Resolved): Parsing existing references with inReferences changes the inReference
Applied in changeset commit:taxeditor|c9d22df2150151a1181ff5c8b8167e1ff5896a73. Katja Luther
09:18 AM bug #8315: Parsing existing references with inReferences changes the inReference
This problem appears because the parser checks whether the inreference already exists in DB and when one or more refe... Katja Luther
09:13 AM bug #8315 (Closed): Parsing existing references with inReferences changes the inReference
mail Mareike Liese:
Hallo,
leider kann ich in der Datenbank nichts speichern.
Ich hab über die Art auf Enter g...
Katja Luther
10:37 AM bug #6523 (Feedback): Correct display of misspellings in synonymy
ich nehme mal Henning hier mit 'rein und übergebe ihm das Ticket.
@Henning: Kannst du dir bitte die beiden Fragen...
Andreas Kohlbecker

05/28/2019

10:15 PM bug #6523: Correct display of misspellings in synonymy
Andreas Kohlbecker wrote:
> sollen misspellings überhaupt in der form "non ... nec ..." dargestellt werden?
würde...
Andreas Müller
05:31 PM feature request #8314 (Closed): TaxonName provides the FullTitleCache as TaggedText
In order to display the nomenclatural status in the DataPortal name page, etc it is required to obtain the tagged ful... Andreas Kohlbecker
02:58 PM bug #8313 (Closed): Multiple categorical data get deleted when clicked on in Character Matrix
If a cell has mutliple categorical data values and you click on it, the data is completely deleted. This does not hap... Patrick Plitzner
02:44 PM feature request #7714 (Rejected): PhycoBank UI Restrictions for reference types
this is avoided to some extend, but we will not enforce this further Andreas Kohlbecker
02:41 PM bug #7959 (Rejected): LazyCombobox popup over sizing problem
solved by implementing the reference ellypsis Andreas Kohlbecker
02:39 PM feature request #7654 (Duplicate): New registration page existing publications combobox does 'begins with search' on author names
this has been solved in another ticket Andreas Kohlbecker
02:38 PM bug #6629: TransmissionEngineDistribution misses aggregating Uzebkistan (UZB-OO) to higher rank levels
maybe also an euro+med issue (for similar problems) Andreas Müller
02:38 PM task #7497 (Rejected): Dokument and add guides and hints to the UI
in the ui the genus and species widgets show a warning and offer a new button at the same time, this should be suffic... Andreas Kohlbecker
02:33 PM bug #8312 (Closed): Test, fix, improve and run Transmission engine for E+M
copied from #3979
===
-run the TransmissionEngineDistribution-:
./description/accumulateDistributions?mode=[...
Andreas Müller
02:28 PM feature request #3989: [DISCUSS] Allow defining the vocabularies to be offered in the select dialogs
Generally implemented for dialogs needed in euro+med.
Still needs check for open issues/other dialogs and for not e...
Andreas Müller
02:27 PM bug #8167: Permission denied for Submitter when adding section to newly created journal
please test if this is still relevant Andreas Kohlbecker
02:17 PM feature request #8196 (In Progress): display ortographic corrections in name relations as 'corrected name: <nameCache>'
this needs to be done in the dbs Andreas Kohlbecker
02:16 PM bug #8311 (New): fix creation of geo webservice string for multi-area mappings with different fields
copied from #5175#note-7 for description see there Andreas Müller
02:13 PM bug #8231: Name relation non
After fixing the data issue the ticket can be closed as duplicate of #7975 Andreas Kohlbecker
02:11 PM bug #8310 (Closed): Issues to solve in E+M shapefile
* add Kosovo (Yu(K) or Ko) and Serbia (Se) as area (without parent information) see #3908#note-14 **DONE**
* add par...
Andreas Müller
02:07 PM feature request #7952 (Rejected): Registration page Maps display in PhycoBank portal
the registration page should only show compact type information. maps will only be shown on the name page Andreas Kohlbecker
01:55 PM bug #7884 (Duplicate): Replacement name not shown in Portal
Andreas Kohlbecker
01:52 PM task #7339 (Closed): activate clickable links for references in Phycobank Dataportal
no longer needed in this way, we display the reference to the publication at the bottom of the reg page, this is clic... Andreas Kohlbecker
01:52 PM feature request #8309 (New): Implement preferences with predicate and subject in local preferences
Actually the preference store for the local preferences is a flat list of preferences without the possibility to defi... Katja Luther
01:46 PM bug #8018 (Worksforme): Registration page: scientific names in the citation to be shown in italics
Andreas Kohlbecker
01:42 PM task #7296: externalize redmine api key
remove all these entries since the redmine communication system has been rejected Andreas Kohlbecker
01:18 PM feature request #8308 (Worksforme): Extend specimen type designation editor
The type list of the specimen type designation editor is still limited and should be extended by the following fields... Andreas Kohlbecker
01:03 PM bug #8114 (Duplicate): used author name cache in nomenclatural reference
already fixed and duplicate of another ticket Andreas Kohlbecker
12:53 PM feature request #8307 (New): display fossil in the context of the taxon name
display fossil in the context of the taxon name, in case the FOSSIL marker is set Andreas Kohlbecker

05/27/2019

06:17 PM feature request #8306: Registration page links to registered taxon name
done! Andreas Kohlbecker
06:17 PM feature request #8306 (Resolved): Registration page links to registered taxon name
Applied in changeset commit:cdm-dataportal|54c1080349223c28d6c37bc32020e7e107c7f178. Andreas Kohlbecker
05:55 PM feature request #8306 (Closed): Registration page links to registered taxon name
The registed name on the registration page should be a link and should be displayed in bold letters (name part only) Andreas Kohlbecker
05:54 PM feature request #8304 (Resolved): Name page redirects to according taxon depending on query parameter
Applied in changeset commit:cdm-dataportal|2f65af049f9784cd0b0de8096df842491c590b31. Andreas Kohlbecker
09:38 AM feature request #8305 (New): show number of references in referencing objects view
mail AM:
es wäre schön, wenn wir, ähnlich wie bei der Warnung im Details View, im referenzing Obj. View noch die A...
Katja Luther

05/26/2019

05:55 PM feature request #8304 (Feedback): Name page redirects to according taxon depending on query parameter
As requested in #8108 the redirection behavior of the name page to the related taxon (if there is only one) should be... Andreas Kohlbecker

05/25/2019

09:47 AM bug #8303 (Resolved): Improve formatting for misapplied names in search results
Currently we get something like
"Cynosurus polybracteatus Poir., Voy. Barbarie 2: 97. 1789"
where you can't se...
Andreas Müller

05/24/2019

11:36 PM bug #6523 (Resolved): Correct display of misspellings in synonymy
Dies sollte nun soweit in Ordnung sein.
Es gibt jedoch noch offene Fragen:
1. Ist es richtig, dass die "is miss...
Andreas Kohlbecker
06:10 PM bug #6523 (Feedback): Correct display of misspellings in synonymy
sollen misspellings überhaupt in der form "non ... nec ..." dargestellt werden? Andreas Kohlbecker
07:10 PM bug #8252: reference ellypsis must not be applied to all reference types
Technically the problem is solved.
As far as we keep the "bibliographic authors" issue in mind, we can close this ...
Wolf-Henning Kusber
07:07 PM feature request #7975: Implement a block to display name relations
![](picture764-1.png)
1. the main issue is perfectly implemented, clear & correct wording
2. minor issue of the d...
Wolf-Henning Kusber
04:13 PM feature request #7975: Implement a block to display name relations
fully implemented an ready for review Andreas Kohlbecker
11:52 AM feature request #7975 (Resolved): Implement a block to display name relations
Applied in changeset commit:cdm-dataportal|ef686dd8e7c670f958e414ee6809803cc4807882. Andreas Kohlbecker
04:12 PM feature request #8196: display ortographic corrections in name relations as 'corrected name: <nameCache>'
one little bit is missing: we need to set the inverse label of the relationship term to "corrected name" in the datab... Andreas Kohlbecker
03:36 PM feature request #8196: display ortographic corrections in name relations as 'corrected name: <nameCache>'
completed, please review Andreas Kohlbecker
11:52 AM feature request #8196 (Resolved): display ortographic corrections in name relations as 'corrected name: <nameCache>'
Applied in changeset commit:cdm-dataportal|ef686dd8e7c670f958e414ee6809803cc4807882. Andreas Kohlbecker
03:40 PM discussion #6678: [DISCUSS] How to correctly show name relationship "orth. var." in dataportal
since different projects may require different representation. See for example #7975 where "has orthographic variant"... Andreas Kohlbecker
11:20 AM feature request #8302: Assure uniqueness of E+M reference number
ERS:
zur Nummernvergabe: jeder Editor hatte ursprünglich einen ausreichenden Slot von Nummern, die er konsekutiv ...
Andreas Müller
11:12 AM feature request #8302 (New): Assure uniqueness of E+M reference number
The E+M reference number is stored as (alternative) identifier in CDM. Alternative identifiers allow duplicates (e.g.... Andreas Müller
11:13 AM feature request #8298 (Duplicate): Check for E+M Reference number being unique
Andreas Müller

05/23/2019

04:22 PM task #8301 (New): Test family editor rights
... as defined for cichorieae in #3979 issue 4 Andreas Müller
04:14 PM feature request #8300 (New): Final adjustments for distribution status in E+M
(see also related tickets)
ein paar weitere Fragen zum Verbreitungsstatus:
**1. naturalised:**
soll in E+M ...
Andreas Müller
02:53 PM feature request #8299 (Closed): add typification column to scientific name and homotypical group in cdm light
mail WB:
Hallo,
ich habe mir von der Ausgabeseite noch mal die Sache mit dem Typus-Textfeld angesehen. Ich denke,...
Katja Luther
12:02 PM feature request #8298 (Duplicate): Check for E+M Reference number being unique
ERS:
Ein Hinweis: diese Nummer wird ja anscheinend als Freitext angelegt, es ist also jetzt möglich, Nummern doppe...
Andreas Müller
11:53 AM bug #8297 (Closed): Fix condensed distribution string for E+M
for previous rules and discussions see also #3907 and other related tickets.
http://portal.cybertaxonomy.org/eurom...
Andreas Müller
11:33 AM feature request #8294: Make display of ID in source and ID Namespace configurable
When fixing please also rename predicate NameInSource. It should be IdNamespace. Also we may rename the predicate in ... Andreas Müller
11:31 AM feature request #8294: Make display of ID in source and ID Namespace configurable
The current implementation does not seem to work. I tried with
![](picture299-1.png)
but still got both Id in ...
Andreas Müller
11:14 AM feature request #8294 (Feedback): Make display of ID in source and ID Namespace configurable
This issue is already mentioned in #7793 and it seems to be fixed (but maybe not yet available in Admin UI). Andreas Müller
11:09 AM task #8262 (Resolved): Handle language area Wales correctly
we now have a separate Common Name area vocabulary. Therefore this ticket should be fixed. Andreas Müller
11:07 AM bug #8260 (Resolved): Details and Supplemental Data View do not save the expansion state of sections
Fixed with commit:taxeditor|8f555f2fc0e00f5b1a203a7db7b653da250332b8 Patrick Plitzner
10:33 AM feature request #8296 (New): Add supplemental data to new/edit dialogs
Currently when editing a new or existing instance via the dialoges it is not possible to see or edit the supplemental... Andreas Müller
07:42 AM bug #8252: reference ellypsis must not be applied to all reference types
Since there are no more obvious problems with reference ellypsis we can close this issue, agreed? Andreas Kohlbecker

05/22/2019

06:08 PM bug #8252: reference ellypsis must not be applied to all reference types
![](picture461-2.png)
six section nomenclatural authors
three authors "et al." displayed. This should be acceptable...
Wolf-Henning Kusber
08:49 AM bug #8252 (Resolved): reference ellypsis must not be applied to all reference types
The improvement is implemented, please review once the test server is updated. Andreas Kohlbecker
01:00 PM feature request #8295 (New): Show the synonyms of a taxon in "Name in Source" selection dialog when opening
Normally the name in source is already in the synonymy of a taxon, so it would be nice to show the names of the synon... Katja Luther
12:57 PM feature request #8294 (Closed): Make display of ID in source and ID Namespace configurable
The display of ID in Source and ID Namespace should be configurable, the preference predicates are available already ... Katja Luther
12:46 PM feature request #8293 (Feedback): Distribution preferences for details view should be serverside preferences
the preferences for distribution data (areas and status) used in details view should be serverside preferences Katja Luther
12:38 PM bug #8292: saving text with special characters throws exception
for the text throwing the exception see the attachment. (putting it in the description of the ticket throws an except... Katja Luther
12:35 PM bug #8292 (New): saving text with special characters throws exception
Saving a text with special characters throws exception:
~~~ text
login : s.vonmering
editor version : 5.7.2
ser...
Katja Luther
12:21 PM bug #8291 (New): saving text with special characters throws exception
Katja Luther
08:33 AM feature request #8289 (Closed): Add "Open in RefObj view" to term editor context menu
Patrick Plitzner

05/21/2019

10:12 PM feature request #8286 (Resolved): Add cm as unit term to CDM
added to cdmlib too. Please review. Andreas Müller
10:07 PM feature request #8286: Add cm as unit term to CDM
See additivity_ontology for uuid and labels.
950c5919-53e4-47ab-9efd-0ea86daa98ca
centimeter
cm
Andreas Müller
07:30 PM feature request #8288 (New): Use plural for e.g. Common Name feature in dataportal
If a plural exists we may think about using the plural for a feature in dataportal.
For details see #8147
Andreas Müller
11:59 AM discussion #6678 (Feedback): [DISCUSS] How to correctly show name relationship "orth. var." in dataportal
please answer to the questions in comment 3 Andreas Kohlbecker
11:55 AM bug #8252 (In Progress): reference ellypsis must not be applied to all reference types
During a phone call today we decided to give the following solution a try:
1. The section author team will be trun...
Andreas Kohlbecker
08:20 AM feature request #5855 (Closed): potential improvements in settings for name relationship types
i am closing this issue now, please reopen I if you feel like you want to review this. Andreas Kohlbecker
08:13 AM feature request #5855 (Resolved): potential improvements in settings for name relationship types
Applied in changeset commit:cdm-dataportal|cd4f8f20a3ebe850407af662a1f3295bd2b3c488. Andreas Kohlbecker

05/20/2019

06:28 PM feature request #7975: Implement a block to display name relations
This is rather a request for a new feature than an improvement for the existing implementation which creates an inlin... Andreas Kohlbecker
04:41 PM task #5856 (Feedback): [DISCUSS] Consider implemeting additional name relationships
Is this still relevant or will the original spelling relation be removed anyway in turn of solving #3967? Andreas Kohlbecker
04:26 PM discussion #6678: [DISCUSS] How to correctly show name relationship "orth. var." in dataportal
I am having two questions regarding the ticket description:
> Maybe it is even enough to only show "orth. var." ...
Andreas Kohlbecker
03:14 PM bug #5774 (Closed): cdmserver misses to detect some errors in failed instances
It occurred again in the demo1 server.
Problem fixed.
Since it is quite time consuming to do do all the testing...
Andreas Kohlbecker
03:11 PM bug #5774 (Resolved): cdmserver misses to detect some errors in failed instances
Applied in changeset commit:cdm-server|0d7b39c76dff44342ce55bf721168a6974fccdab. Andreas Kohlbecker
03:10 PM bug #5774 (In Progress): cdmserver misses to detect some errors in failed instances
Andreas Kohlbecker
01:16 PM feature request #8284 (Resolved): starting a registration for an existing name causes the name editor to pop up in read only mode
Vorschlag übernommen für beide Fälle. Dann können wir dieses Ticket schließen? Andreas Kohlbecker
12:59 PM feature request #7966: Registration search simplify type select options
@Henning: please review Andreas Kohlbecker
12:58 PM feature request #7966: Registration search simplify type select options
This issue is solved, however there is a problem in the service method driving the search (#8287) due to which the op... Andreas Kohlbecker
12:37 PM feature request #7966 (Resolved): Registration search simplify type select options
Applied in changeset commit:cdm-dataportal|84ec1c1b58a6d4667402a3f456f90e76c92ad5c5. Andreas Kohlbecker
12:56 PM bug #8287 (Closed): RegistrationServiceImpl.page( .... Collection<UUID> typeDesignationStatusUuids ... ) fails when NULL and UUIDs are passed
In case the collection of typeDesignationStatusUuids contains both, a `null` value and UUIDs the request fails.
Th...
Andreas Kohlbecker
12:33 PM feature request #7610 (Duplicate): Type search in PhycoBank Portal
Ok to close this as duplicate given by henning in #7965#note-11 implicitely Andreas Kohlbecker
10:40 AM feature request #8286 (Closed): Add cm as unit term to CDM
We may also add cm only to the additivity production DB Patrick Plitzner

05/19/2019

11:08 PM bug #6938 (Resolved): Tasks before a new Euro+Med import
should be resolved, I did run all the steps (1 mail to ERS is still open, about corrupt hierarchies for Polygonum etc.) Andreas Müller
09:43 PM task #7369 (Resolved): Handle taxonomically valueless taxa correctly
The taxa are now all exported to a common root taxon "Valueless". They can be moved somewhere else after import if ne... Andreas Müller
09:43 PM feature request #8285 (New): Handle taxonomically valueless taxa in data portal
for details see #7369#note-15
relevant taxa are currently marked with marker "taxonomically valueless"
![](clip...
Andreas Müller
 

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