Activity

From 04/09/2019 to 05/08/2019

05/08/2019

05:24 PM bug #8266 (Closed): local preference is not evaluated for distribution editor status: Tested on nightly: changed common name preferences, saved, re-connected, preference changes were saved
Patrick Plitzner
02:08 PM bug #8266 (Resolved): local preference is not evaluated for distribution editor status: Katja Luther
01:12 PM bug #8266 (Closed): local preference is not evaluated for distribution editor status: mail NK:
Hallo,
irgendwie scheint es einen neuen(?) bug zu geben: Ich kann die local preferences für zur Auswah... Katja Luther
05:21 PM bug #8267 (Closed): common name preference saving does not work correctly: Tested on nightly: changed common name preferences, saved, re-connected, preference changes were saved Patrick Plitzner
02:03 PM bug #8267 (Resolved): common name preference saving does not work correctly: please review Katja Luther
01:22 PM bug #8267 (Closed): common name preference saving does not work correctly: mail AM:
Hallo Katja,
wie es scheint lässt sich die Präferenz der CommonNames, wenn sie einmal gesetzt ist nich... Katja Luther
05:19 PM bug #8258 (Closed): Default Feature Tree contains name features and features: tested on nightly. Name features do not appear for taxon descriptions and vica versa Patrick Plitzner
02:06 PM bug #8258: Default Feature Tree contains name features and features: please review Katja Luther
05:18 PM feature request #8263: Improve performance of term editor: For testing the performance try cdm_production_additivity_ontology on the test server Patrick Plitzner
05:00 PM feature request #8263 (Resolved): Improve performance of term editor: For review just try out every operation: delete, create, move
Known issue: When creating a new term or vocabulary ... Patrick Plitzner
05:16 PM bug #8265 (Closed): Referencing objects view does not work for term editor: tested on nightly. Works fine Patrick Plitzner
02:04 PM bug #8265 (Resolved): Referencing objects view does not work for term editor: please review Katja Luther
01:10 PM bug #8265 (Closed): Referencing objects view does not work for term editor: mail AM:
Hallo,
kann es sein, dass der Referencing Objects View für Terme gerade gar nicht mehr funktoniert? Ic... Katja Luther
12:54 PM feature request #8264 (Closed): excluded and excluded notes in cdmlight export: mail WB:
Hallo Katja,
dumm, dass ich das nicht vor dem Release gefragt habe:
Können wir die Excluded Flag sowie... Katja Luther
11:19 AM bug #8129: Load images asynchronously in media details view: Also check #1072 before implementation Andreas Müller

05/07/2019

06:16 PM bug #8252: reference ellypsis must not be applied to all reference types: ![](picture017-1.png)
Ellipsis must not be applied to in-authors/nomenclatural author team.
Example:
How to corr... Wolf-Henning Kusber
04:25 PM feature request #8263 (Resolved): Improve performance of term editor: A good test for performance issue is the term editor for stats in DB cdm_production_additivity_ontology which has 900... Patrick Plitzner
03:32 PM bug #8260: Details and Supplemental Data View do not save the expansion state of sections: For SupplementalData the preference for expansion state was not evaluated, this is fixed with revision 544be2e6d53d1b... Katja Luther
11:26 AM bug #8260 (Closed): Details and Supplemental Data View do not save the expansion state of sections: This is a regression as it worked before. This may have to do with the revamp of the preferences in general. Patrick Plitzner
01:24 PM bug #8259 (Duplicate): Focus of bulkeditor is not set as selection for newly opened referencing objects view: Katja Luther
11:09 AM bug #8259 (Duplicate): Focus of bulkeditor is not set as selection for newly opened referencing objects view: mail von AM:
Öffnen in RefObjects im Bulk Editor
… funktioniert nicht richtig. Sowohl der Details View als auch... Katja Luther
01:21 PM task #8262 (Resolved): Handle language area Wales correctly: Currently it is the only area in "User defined areas" as it is not in the emArea map. Need to check what happens if w... Andreas Müller
01:13 PM bug #8261 (New): Referencing objects view is missing focus after opening: AM: "Öffnen in RefObjects im Bulk Editor funktioniert nicht richtig. Sowohl der Details View als auch der neu geöffne... Patrick Plitzner
12:13 PM feature request #8257 (Resolved): Remove factory methods for term node creation: Applied in changeset commit:cdmlib|48e5bbde635e7d2fd347cf5c2eef0d103c3699db. Patrick Plitzner
09:49 AM bug #8258 (Resolved): Default Feature Tree contains name features and features: Applied in changeset commit:taxeditor|9814168df618526a6f23ea9c38a0ad9391ffc245. Katja Luther
09:41 AM bug #8258 (Closed): Default Feature Tree contains name features and features: The default feature tree should contain only features not belonging to the nameFeature Vocabulary. Katja Luther

05/06/2019

07:36 PM feature request #8193: TaxonNamePopupEditor: add select form element for Nomenclatural status: a minor issue: typing in status data, e.g. Article, a small grey area is shown on the status bar (in my browser) Wolf-Henning Kusber
07:33 PM feature request #8193: TaxonNamePopupEditor: add select form element for Nomenclatural status: Tested 2019-05-06:
1. Labeles okay, too much entries but this can be solved later
2. Test system has again full f... Wolf-Henning Kusber
06:51 PM feature request #7797: Second nomenclatural reference: ERS:
"an jam" drückt Zweifel aus, ob die genannte Referenz sich auf denselben Namen bezieht oder nicht
"emend." b... Andreas Müller
03:35 PM feature request #8257 (In Progress): Remove factory methods for term node creation: Patrick Plitzner
03:35 PM feature request #8257 (Closed): Remove factory methods for term node creation: Currently it is possible to create a `FeatureNode` on its own, e.g. with a given term
~~~java
public static <T e... Patrick Plitzner
12:23 PM feature request #8256 (Feedback): Show all status preferences as table: The table/list should show all entries for the given predicate with different subject (e.g. /, /taxeditor, /NamedArea... Katja Luther

05/03/2019

04:50 PM feature request #8182 (In Progress): show blast search result: Katja Luther
04:38 PM feature request #8242 (Resolved): Implement filtered combo boxes for state selection in CharacterMatrix: move to 5.8 because still experimental Patrick Plitzner
04:22 PM feature request #8242 (Feedback): Implement filtered combo boxes for state selection in CharacterMatrix: As this is still experimental I think it is not necessary to review. I will review once the character matrix becomes ... Andreas Müller
10:27 AM feature request #8242 (Resolved): Implement filtered combo boxes for state selection in CharacterMatrix: Patrick Plitzner
04:34 PM feature request #8241 (Closed): Rename FeatureTreeEditor to TermTreeEditor: Patrick Plitzner
04:07 PM feature request #8241 (Feedback): Rename FeatureTreeEditor to TermTreeEditor: hmm, this doesn't make so much sense as long as in standard version only feature trees can be edited. However, as it ... Andreas Müller
11:07 AM feature request #8241 (Resolved): Rename FeatureTreeEditor to TermTreeEditor: Patrick Plitzner
12:04 PM bug #7223 (Feedback): ReferenceEditor: disable fields depending on the Reference type: Personal Communication has no DOI neither in the interfaces nor in TaxEditor. If this is available in vaadin this is ... Andreas Müller
11:40 AM bug #7223: ReferenceEditor: disable fields depending on the Reference type: "And I guess also for personal communication no DOI should be available." correct. Wolf-Henning Kusber
12:03 PM feature request #8255 (New): Unify ReferencePropertyDefinitions and reference interfaces: For details see https://dev.e-taxonomy.eu/redmine/issues/7223#note-28 and before.
To avoid inconsistent behavior w... Andreas Müller
11:41 AM bug #8254 (New): Add term information to state dropdown in CharacterMatrix: Copied from #8242:
Additionally, we should think about adding tooltips with the description (and also image) of th... Patrick Plitzner
11:40 AM feature request #8248: Implement OWL import: Moving to 5.8 because still experimental Patrick Plitzner
10:29 AM feature request #8248 (Resolved): Implement OWL import: Patrick Plitzner
11:37 AM bug #7953: Book in BookSeries: incomplete titleCache misses series title: Correct: "Iconographia Diatomologica. 23" is absolutely necessary to identify the book. For my understanding the "pr... Wolf-Henning Kusber
11:30 AM bug #7953: Book in BookSeries: incomplete titleCache misses series title: By the way, this part of the description to me seems incorrect: Expected titleCache is: "Taxonomy - biogeography - di... Andreas Müller
11:28 AM bug #7953: Book in BookSeries: incomplete titleCache misses series title: As described in https://dev.e-taxonomy.eu/redmine/issues/7223#note-19 the print series is meant only for grouping not... Andreas Müller
10:25 AM bug #7896: NPE, NullPointerException in RelationshipTermBase: This belongs to 5.6 if fixed, otherwise should be set to Feedback. Please review. Andreas Müller

05/02/2019

01:55 PM feature request #8253 (Closed): Authors for genus autonyms: ERS:
den Autor bei infragenerischen Taxa hinter den gesamten Namen zu stellen, wie jetzt in Euro+Med, ist mit Sich... Andreas Müller

05/01/2019

07:24 PM bug #8252: reference ellypsis must not be applied to all reference types: "It is also possible to skip the ellipsis completely in this case some titles could exceed the given space, though.
... Wolf-Henning Kusber

04/24/2019

02:52 PM bug #8214 (Closed): WeaklyRelatedEntityCombobox is not validated: closing issue after copying the additional requirement to a new ticket #8249. The solution for this additional requir... Andreas Kohlbecker
02:34 PM bug #8249 (New): WeaklyRelatedEntityCombobox: validation of isRequired should only happen after user interaction: WeaklyRelatedEntityCombobox which are required should not be set invalid immediately, only after user interaction
... Andreas Kohlbecker
01:01 PM bug #8184 (Feedback): SpecimenTypedesignationEditor: add new specimen broken Chrome browser: I tested with the the latest version of the Google Chrome Browser on Mac and on Windows 10 and had no problems.
He... Andreas Kohlbecker
12:14 PM feature request #8248 (In Progress): Implement OWL import: Patrick Plitzner
12:06 PM bug #8227 (Worksforme): PhycoBank UI and Safari: successfully tested on
* Mac OS 10.10.5 with Safari 10.1.2
* Mac OS 10.14.1 with Safari 12.0.1
I will close th... Andreas Kohlbecker
11:45 AM bug #8246 (Resolved): TaxonNamePopupEditor can not be canceled: Applied in changeset commit:cdm-vaadin|7095e8e36a979a24f37d9013e389ea64ac9a9cbe. Andreas Kohlbecker
11:44 AM bug #8246: TaxonNamePopupEditor can not be canceled: in contrast to the original assumption this issue has nothing to do with invalid fields. Andreas Kohlbecker
09:45 AM bug #8247 (New): Webservice redlist CSV Export broken: The drupal module "CDM CSV Export" is no longer working
Issues:
1. the module uses GET, the web service only ac... Andreas Kohlbecker
08:32 AM bug #8231 (Feedback): Name relation non: What do you want me do to about this?
I understand that there are two problems:
1. The output of replaced synon... Andreas Kohlbecker

04/23/2019

05:59 PM bug #7953: Book in BookSeries: incomplete titleCache misses series title: please can you handle this issue with high priority? It is quite important for phycobank since we are frequently havi... Andreas Kohlbecker
05:28 PM bug #8246 (Closed): TaxonNamePopupEditor can not be canceled: The attempt to cancel editing a TaxonNamePopupEditor with missing genus fails and ends up with corrupted form:
![]... Andreas Kohlbecker
04:21 PM feature request #8245 (Closed): Improve representation of DescriptionElementBase.timeperiod: The formatting 2017-00-00 to 2018-00-00 is not nice. Having only a year or a year and a month but no day is a very co... Andreas Kohlbecker
04:19 PM feature request #3616 (Closed): Show DescriptionElementBase.timeperiod in Dataportals: Andreas Müller wrote:
> Andreas Kohlbecker wrote:
>
> Can we still try to remove these trailing zeros (only for t... Andreas Kohlbecker
04:15 PM bug #7106 (Closed): avoid factory.openSession() in CdmRepository: Andreas Kohlbecker
04:13 PM bug #8050 (Feedback): Create blocking registrations for un-registered names which are to be used in nomenclatural acts: I cannot reproduce the problems mentioned in comment 12 and 13.
Andreas Kohlbecker
03:55 PM feature request #8173 (Closed): spring profile remoting enabled by default: remoting switch `-Dspring.profiles.active=remoting` removed from all server configurations and from documentation Andreas Kohlbecker
03:42 PM bug #8188 (Closed): Allow configuring hibernate properties via properties file: tested by running the selenide test class eu.etaxonomy.cdm.vaadin.ui.RegistrationUiTest Andreas Kohlbecker
01:08 PM bug #8217 (Closed): ToManyRelatedEntitiesComboboxSelect edit button not enabled: new ticket #8244 Andreas Kohlbecker
12:16 PM bug #8217 (Resolved): ToManyRelatedEntitiesComboboxSelect edit button not enabled: Andreas Kohlbecker
01:08 PM bug #8244 (New): Skip validation of ToManyRelatedEntitiesComboboxSelect when editor is read only: copied from #8217 Andreas Kohlbecker
12:22 PM task #7935 (Closed): Discuss new solution to establish the communication between submitter and curator: noting to add to this issue. The email based communication is a proper solution for the time being. Andreas Kohlbecker

04/16/2019

04:10 PM feature request #8009 (Rejected): Check if Nebula TextAssist can be used to select categorical data in CharacterMatrix: NatCombo already offers this functionality -> #8242 Patrick Plitzner
11:48 AM bug #8243 (Resolved): Cdm Cache uses a lot of disk space: Recently Tilo experienced a sudden system freeze when his main partition went from ~3GB free disk space to 100% full ... Patrick Plitzner

04/15/2019

04:20 PM feature request #8242 (Closed): Implement filtered combo boxes for state selection in CharacterMatrix: ~~Right now the dropdown for categorical states in CharacterMatrix is not scrollable which is a problem for large sta... Patrick Plitzner

04/12/2019

01:07 PM task #7515 (Resolved): TypeDesignationStatusComparator to sort by vocabulary first and then by term order: Andreas Müller
01:06 PM bug #8223 (Resolved): Urgent TaxonNode wizard issues: Andreas Müller
12:58 PM feature request #7932: Implement subject resolver for CdmPreferences: This is mostly done but untested therefore move to 5.7 Andreas Müller
12:01 PM task #7935: Discuss new solution to establish the communication between submitter and curator: As plan B: E-Mail curation@phycobank.org is working now,
Currently most phycologists contact the curator by the pe... Wolf-Henning Kusber
11:45 AM bug #7953: Book in BookSeries: incomplete titleCache misses series title: Book in this series:
title: "Taxonomy - biogeography - diversity"
datePublished: "2012"
editor: "L... Wolf-Henning Kusber
11:25 AM bug #7979 (Closed): Registration date and time, display: Test portal and Release Portal (checked 2019-04-12):
Displayed dates are correct.
Registrations made in Vaadin ar... Wolf-Henning Kusber
10:51 AM bug #8090 (Closed): Reference editor: Label In proceedings in InProceedings missing: Wolf-Henning Kusber
10:33 AM feature request #8155: SpecimenTypeDesignationEditor: allow choosing the typified name from the homotypical group for specific type status: Agreed: if the basionym is existing this name should be chosen as default for the typified name field.
In general,... Wolf-Henning Kusber

04/11/2019

05:54 PM bug #8065 (Resolved): HibernateException: corrupt session problem breaks SpecimenTypeDesignationworkingsetEditor type designation table: Andreas Kohlbecker
05:54 PM bug #8099 (Resolved): Error saving name type designation editor due to problem in poupeditor context: Andreas Kohlbecker
05:51 PM bug #7690 (New): Adapt available typedesignation editors to name rank: Andreas Kohlbecker
05:48 PM feature request #8173 (Resolved): spring profile remoting enabled by default: needs to be reviewed Andreas Kohlbecker
05:45 PM bug #7106 (Resolved): avoid factory.openSession() in CdmRepository: this issue should be solved now Andreas Kohlbecker
05:45 PM bug #7106: avoid factory.openSession() in CdmRepository: changing the ticket subject since there is now a separate ticket for the DaoBase class: #8169 Andreas Kohlbecker
05:44 PM bug #8050: Create blocking registrations for un-registered names which are to be used in nomenclatural acts: Poposal: Make names (stored in the system) available [as new names as well as for existing names]. For genera, the au... Wolf-Henning Kusber
04:24 PM bug #8050: Create blocking registrations for un-registered names which are to be used in nomenclatural acts: Related to #8217
If a name without reference is in the dropdown list, the user is forced to add a reference.
This i... Wolf-Henning Kusber
05:41 PM bug #8188 (Resolved): Allow configuring hibernate properties via properties file: this should be solved Andreas Kohlbecker
05:30 PM bug #7962 (Closed): PopupEditors: *DTO in context 'breadcrumbs' to be transformed into more humane labels: works as expected Andreas Kohlbecker
05:28 PM bug #8189 (In Progress): Allow configuration of 'user.home' via the spring environment: now that the changes made for this ticket are no longer causing any problems I will do the next step: turning all spi... Andreas Kohlbecker
05:21 PM bug #8176 (Closed): WeaklyRelatedEntityCombobox is slow: The WeaklyRelatedEntityCombobox is no longer causing performance problems and edit as well create buttons are working... Andreas Kohlbecker
04:54 PM bug #8217 (Feedback): ToManyRelatedEntitiesComboboxSelect edit button not enabled: I consider this correct behavior but not user friendly. We should disable the vlaidation in case the editor is readon... Andreas Kohlbecker
04:01 PM bug #8217: ToManyRelatedEntitiesComboboxSelect edit button not enabled: Curator:
Test
Replaced synonym without reference. Warning, selection of an existing reference, save. Works
Submi... Wolf-Henning Kusber
04:26 PM feature request #8241 (Closed): Rename FeatureTreeEditor to TermTreeEditor: This does not have to be done in the Java classes but in the UI Patrick Plitzner
04:18 PM bug #8225 (In Progress): Deleting one of two type designations removes both: this works now, but is not really nice. So we move it to next release. Katja Luther
12:57 PM bug #8225 (Feedback): Deleting one of two type designations removes both: the deleted typeDesignation is not removed, this problem also appears when both typedesignations are already persisted Katja Luther
12:27 PM bug #8225 (Resolved): Deleting one of two type designations removes both: Katja Luther wrote:
> tested on nightly:
>
> * create a new typeDesignation (a first one already exists)
> * del... Patrick Plitzner
11:58 AM bug #8225 (Feedback): Deleting one of two type designations removes both: tested on nightly:
* create a new typeDesignation (a first one already exists)
* delete the first one
* the seco... Katja Luther
03:22 PM bug #7963 (Closed): TaxonNamePopEditor: name part field visibility not correct for all ranks: new ticket: #8240 Wolf-Henning Kusber
03:19 PM bug #7963: TaxonNamePopEditor: name part field visibility not correct for all ranks: For rank "unknown rank" only the uninomial field is shown. Correct. Wolf-Henning Kusber
03:20 PM bug #8240 (New): TaxonNamePopEditor: name part field visibility not correct for all ranks (new): I checked the complete list. With some ranks (mostly not relevant for PhycoBank, I have problems).
"species aggega... Wolf-Henning Kusber
02:49 PM bug #8184 (In Progress): SpecimenTypedesignationEditor: add new specimen broken Chrome browser: Andreas Kohlbecker
02:10 PM bug #8184: SpecimenTypedesignationEditor: add new specimen broken Chrome browser: Testsystem 09 April 2019.
saving types not possible. See also problems with Safari/Mac. Wolf-Henning Kusber
02:37 PM bug #8097 (Closed): Problem with inserting a section - inReference is "lost": Andreas Kohlbecker
02:31 PM bug #8097: Problem with inserting a section - inReference is "lost": Test:
bottom up: section in (select) article: works
bottom up: section in (select) book: works
top down: select ar... Wolf-Henning Kusber
01:11 PM bug #8171 (Closed): javax.sql.DataSource.getConnection() implementation in WrappedCdmDataSource fails to cache the connection which and leaves it unclosed: We can close this ticket as solved, since fixing this issue did not cause any side effect problems Andreas Kohlbecker
12:05 PM task #7515: TypeDesignationStatusComparator to sort by vocabulary first and then by term order: please have a look whether this solves the problem Katja Luther
12:01 PM bug #8088: Open taxon node wizard issues: the urgent issues are handled in #8223, the rest will be implemented in 5.7 Katja Luther
12:00 PM feature request #8058: Further issues for (local) preferences: the only missing issue is the height of the matching dialog, so I move this ticket to 5.7 Katja Luther
11:55 AM bug #8222 (Closed): Deleting a type designation from a name is directly persisted: tested on nightly:
* created new typeDesignation and save
* remove typeDesignation and close without saving
* th... Katja Luther
11:53 AM bug #7541 (Closed): Insufficient rights lead to missing focus in name editor: the details view issues are now handled in #8239 Katja Luther
10:56 AM bug #7541: Insufficient rights lead to missing focus in name editor: So do I understand correctly that **this** ticket is only about setting the focus in name editor and not about the ot... Andreas Müller
10:54 AM bug #7541: Insufficient rights lead to missing focus in name editor: Katja Luther wrote:
> Andreas Müller wrote:
> > Hmm, can someone explain what the expected behavior is? To me it so... Andreas Müller
11:50 AM feature request #8239 (New): Rights issues in TaxEditor: This should be a ticket to collect all rights issues in taxEditor.
* in Details View fields the user is not allowe... Katja Luther
11:47 AM bug #8219 (Rejected): Permission denied when creating a new reference with existing inreference for which submitter has no UPDATE permission: I could not reproduce this bug in the test system. There where also no related error report in the mails or in Riot s... Andreas Kohlbecker
11:24 AM bug #8219: Permission denied when creating a new reference with existing inreference for which submitter has no UPDATE permission: Andreas Müller wrote:
> What I do not understand is if already the select creates the wrong result how can hibernate... Andreas Kohlbecker
09:44 AM bug #8219: Permission denied when creating a new reference with existing inreference for which submitter has no UPDATE permission: What I do not understand is if already the select creates the wrong result how can hibernate (security) know that the... Andreas Müller
08:55 AM bug #8219: Permission denied when creating a new reference with existing inreference for which submitter has no UPDATE permission: Andreas Müller wrote:
> Is the subselect necessary to reproduce the behavior in the above SQL statements. If not we ... Andreas Kohlbecker
11:46 AM feature request #4028 (Closed): Distinguish Features and Characters: Andreas Müller
11:45 AM task #7414 (Closed): Delete mediaCreatedOld: Andreas Müller
11:44 AM feature request #7470 (Closed): Verbatim type designation information: Andreas Müller
11:44 AM feature request #3836 (Resolved): Implement modifiers and modifying text for Description Elements in TaxEditor: Andreas Müller wrote:
> Katja Luther wrote:
> > now the modifier section is shown only if the feature has recommend... Katja Luther
11:43 AM bug #7682 (Closed): Point.precision must not be 0 by default: Andreas Müller
11:43 AM feature request #7653 (Closed): [DISCUSS] Delete NameFacts => Result: no: Andreas Müller
11:42 AM bug #7772 (Closed): Rename TermBase_inverseRepresentation to DefinedTermBase_InverseRepresentation: Andreas Müller
11:42 AM bug #7683 (Closed): external links Audit table should allow uuid to be null: Andreas Müller
11:41 AM bug #7859 (Closed): Increase size of CdmPreference.value: Andreas Müller
11:41 AM bug #7857 (Closed): Update name relationship type representations and symmetrie: Andreas Müller
11:40 AM task #8118: Update MySQL drivers: how to information added to [[MySqlFaq]] Andreas Kohlbecker
10:05 AM task #8118: Update MySQL drivers: We should create a Wiki page for this information. Move to new milestone as this is not release critical. Andreas Müller
11:40 AM feature request #8012 (Closed): Add termType for Structure and Property: Andreas Müller
11:39 AM feature request #8019 (Closed): Add "Typification Notes", "Ortography" and "Etymology" to NameFeature vocabulary: Andreas Müller
11:37 AM feature request #8120 (Closed): Add structural and property modifiers: Andreas Müller
11:37 AM feature request #8142 (Closed): Representations have optional "plural" as additional field: Andreas Müller
11:35 AM feature request #8136 (Closed): Implement sources for type designations in TaxEditor: Andreas Müller
11:31 AM feature request #8136: Implement sources for type designations in TaxEditor: I can not close the ticket as long as #8017 is not closed. Katja Luther
11:30 AM feature request #8136 (Resolved): Implement sources for type designations in TaxEditor: Andreas Müller wrote:
> Maybe we shorten the "Status Reference Detail" to "Status Ref Detail" or back to "Reference ... Katja Luther
10:46 AM feature request #8136: Implement sources for type designations in TaxEditor: Maybe we shorten the "Status Reference Detail" to "Status Ref Detail" or back to "Reference Detail" (maybe with a sma... Andreas Müller
10:43 AM feature request #8136: Implement sources for type designations in TaxEditor: Now lectotype references have more space for the labels then ordinary types:
![](picture499-1.png)
This does no... Andreas Müller
10:10 AM feature request #8136: Implement sources for type designations in TaxEditor: Andreas Müller wrote:
> Katja Luther wrote:
> > Andreas Müller wrote:
> > > If Status is completely deleted the re... Katja Luther
10:04 AM feature request #8136: Implement sources for type designations in TaxEditor: I just realized that the same problem exists e.g. for original sources. So it seems to be a general issue for lists, ... Andreas Müller
08:47 AM feature request #8136: Implement sources for type designations in TaxEditor: For selection the type designation you can basically select any empty space on the left or right side (see image)
... Patrick Plitzner
11:34 AM feature request #8017 (Closed): TypeDesignations need sources additional to lectotypifcation sources: Andreas Müller
11:33 AM feature request #8124 (Closed): Activate Name Facts in Taxeditor: the ticket for the updating of bulkeditors is #8229, the rest is implemented and reviewed so I close this ticket. Katja Luther
11:30 AM bug #8200 (Closed): Changing title(cache) for factual data set not possible: Closing this ticket as the remaining issues are duplicated in #7865 Patrick Plitzner
09:16 AM bug #8200 (Feedback): Changing title(cache) for factual data set not possible: Katja Luther wrote:
> but as this is the general behaviour for titlecaches we may close this ticket? Because it work... Andreas Müller
11:20 AM feature request #8146 (Closed): Adapt taxeditor UI to structure and property term type: Added #8146#note-30 to #8235
Created #8238 for #8146#note-31
Closing this ticket Patrick Plitzner
09:57 AM feature request #8146: Adapt taxeditor UI to structure and property term type: All the rest seems to work and ticket can be closed then. Andreas Müller
09:56 AM feature request #8146 (Feedback): Adapt taxeditor UI to structure and property term type: Generally it should be possible to move a Character subtree to a Feature tree as Character is a subtype. But of cours... Andreas Müller
09:50 AM feature request #8146: Adapt taxeditor UI to structure and property term type: Why not using the term type in the label, e.g. instead of FeatureTree => Structure Tree. Then users must not think ab... Andreas Müller
11:19 AM feature request #8238 (Feedback): Allow interoperability between term trees: Copied from #8146:
Generally it should be possible to move a Character subtree to a Feature tree as Character is a... Patrick Plitzner
11:06 AM feature request #7865 (Resolved): Remaining factual data view label issues: It has now be solved like this:
* TitleCache is protected -> \<old TitleCache\> - \<Move message\>
* TitleCache i... Patrick Plitzner
09:27 AM feature request #7865 (Feedback): Remaining factual data view label issues: As mentioned in note-11 the solution for the problem is not so easy. First of all we should have a look how it was im... Andreas Müller
09:20 AM feature request #7865: Remaining factual data view label issues: Patrick Plitzner wrote:
> The titlecache issue is solved. Some other issues came up while fixing this ticket -> #823... Andreas Müller
10:35 AM feature request #3616: Show DescriptionElementBase.timeperiod in Dataportals: Andreas Kohlbecker wrote:
> I suggest to close this ticket now, agreed?
What I really don't like in the current i... Andreas Müller
10:31 AM bug #7904: DerivedUnitFacadeFieldUnitCacheStrategy.getCollectorAndFieldNumber() creates temporary Team objects which can not be garbage collected.: As release is urgent now I have to move again to next milestone Andreas Müller
10:31 AM bug #8190 (Closed): Default FeatureTree throws exception: For me it also seems to work Andreas Müller
10:16 AM bug #8233 (In Progress): [Follow up] Creating type duplicates: The fixes work as expected. A minor issue: as type status is a required field but Accession number etc are not we sho... Andreas Müller
10:11 AM feature request #6413 (Closed): [DISCUSS] How to create type duplicates (e.g. isotypes) for a taxon name: As some of the most important issues from #8233 are solved in the meanwhile we can close this ticket and try to fully... Andreas Müller

04/10/2019

10:20 PM feature request #8136: Implement sources for type designations in TaxEditor: So not very nice (as selection is crucial for entering sources, but it is true that it always works in the area below... Andreas Müller
10:16 PM feature request #8136: Implement sources for type designations in TaxEditor: Patrick Plitzner wrote:
> > Clicking somewhere behind the type combo or the 'Not deisgnated' checkbox activates the ... Andreas Müller
10:05 PM feature request #8136: Implement sources for type designations in TaxEditor: Katja Luther wrote:
> Andreas Müller wrote:
> > If Status is completely deleted the reference is not deleted but sh... Andreas Müller
06:12 PM feature request #8136: Implement sources for type designations in TaxEditor: > Clicking somewhere behind the type combo or the 'Not deisgnated' checkbox activates the selection of the type desig... Patrick Plitzner
02:56 PM feature request #8136: Implement sources for type designations in TaxEditor: Andreas Müller wrote:
> ??
this was a question for Patrick. See the description in node#33 Katja Luther
02:53 PM feature request #8136: Implement sources for type designations in TaxEditor: ?? Andreas Müller
09:55 PM bug #8219: Permission denied when creating a new reference with existing inreference for which submitter has no UPDATE permission: Andreas Kohlbecker wrote:
> reopening since I seem to remember that this bug has been originally reported by Heba wh... Andreas Müller
09:54 PM bug #8219: Permission denied when creating a new reference with existing inreference for which submitter has no UPDATE permission: Is the subselect necessary to reproduce the behavior in the above SQL statements. If not we should tear down to a sin... Andreas Müller
06:33 PM bug #8219 (In Progress): Permission denied when creating a new reference with existing inreference for which submitter has no UPDATE permission: reopening since I seem to remember that this bug has been originally reported by Heba when working on the test or pro... Andreas Kohlbecker
06:16 PM bug #8219 (Rejected): Permission denied when creating a new reference with existing inreference for which submitter has no UPDATE permission: I filed a bug report in the Oracle bug tracker:
https://bugs.mysql.com/bug.php?id=94973
since we can not do a... Andreas Kohlbecker
05:49 PM bug #8219: Permission denied when creating a new reference with existing inreference for which submitter has no UPDATE permission: further reduced the query reproducing the bug to
~~~sql
SELECT
this_.nomenclaturallyRelevant,
this_.externalL... Andreas Kohlbecker
05:41 PM bug #8219: Permission denied when creating a new reference with existing inreference for which submitter has no UPDATE permission: This could be related to the mysql bug https://bugs.mysql.com/bug.php?id=94795 Andreas Kohlbecker
05:36 PM bug #8219: Permission denied when creating a new reference with existing inreference for which submitter has no UPDATE permission: The above bug seems only to occur on my laptop which is running
mysqld Ver 5.7.25-0ubuntu0.16.04.2 for Linux on x... Andreas Kohlbecker
05:18 PM bug #8219: Permission denied when creating a new reference with existing inreference for which submitter has no UPDATE permission: The above described effect can be more isolated with the following queries:
Correct results:
~~~sql
SELECT
t... Andreas Kohlbecker
04:57 PM bug #8219: Permission denied when creating a new reference with existing inreference for which submitter has no UPDATE permission: I now pinned down the cause to the `.IIdentifiableEntityService.findByTitleWithRestrictions(..)` methods.
What is ... Andreas Kohlbecker
05:53 PM feature request #8044: Add "Move to..." menu to term editor: Moving to 5.7 where it can be reviewed when set to non-experimental Patrick Plitzner
05:52 PM task #8130: Check if related feature data is cleared when supported facts type is changed: moved to 5.7 Patrick Plitzner
05:51 PM feature request #8135: Implement verbatim type information in TaxEditor: Moving to 5.7 Patrick Plitzner
05:49 PM bug #8233 (Resolved): [Follow up] Creating type duplicates: @Andreas: Could you review the fixed issues and, if everything works, move this ticket to 5.7 again? Patrick Plitzner
07:50 AM bug #8233 (In Progress): [Follow up] Creating type duplicates: remaining issues from #6413:
* ~~We should change order, first collection, then accession number.~~
* Also the st... Patrick Plitzner
03:58 PM feature request #8096 (Closed): Implement CacheUpdater as long running task with correct progress monitoring: Moved null/empty cache issues to new ticket #8237.
All the rest works or has new ticket so we can close this one. Andreas Müller
03:57 PM bug #8237 (New): Cache updating sometimes does not work as expected for references and names: ... and maybe other classes. Details can be found in #8096#note-20 and previous comments Andreas Müller
03:52 PM feature request #8124 (Feedback): Activate Name Facts in Taxeditor: Can you please link the bulk editor tickets?
The switching between 2 bulk editors with same name seems to work now... Andreas Müller
03:45 PM feature request #3836 (Feedback): Implement modifiers and modifying text for Description Elements in TaxEditor: Katja Luther wrote:
> now the modifier section is shown only if the feature has recommended modifier voc, so it is h... Andreas Müller
03:43 PM feature request #3836: Implement modifiers and modifying text for Description Elements in TaxEditor: The discussion on recommended modifiers I moved to #8236. Andreas Müller
12:04 PM feature request #3836 (Resolved): Implement modifiers and modifying text for Description Elements in TaxEditor: Katja Luther
03:41 PM feature request #8236 (New): [DISCUSS] Should recommended modifiers also hold for DescriptionElements: Currently they are only available for features that support categorical or quantitative data. Here it triggers the mo... Andreas Müller
03:33 PM bug #8211 (Closed): Trigger new search when clicking on identifier search: now it works Andreas Müller
02:21 PM bug #8223 (In Progress): Urgent TaxonNode wizard issues: Katja Luther
01:48 PM bug #8228 (Closed): refresh of details for same object in different bulk editors does not work: I tested on nightly/rem_conf_am:
* I searched in the taxon bulk editor with the same search string
* I selected t... Patrick Plitzner
01:17 PM bug #8228: refresh of details for same object in different bulk editors does not work: Patrick Plitzner wrote:
> Shouldn't bulk editor only open as singletons? What is the use case of having the same obj... Katja Luther
01:09 PM bug #8228 (Feedback): refresh of details for same object in different bulk editors does not work: Shouldn't bulk editor only open as singletons? What is the use case of having the same object selected in two differe... Patrick Plitzner
12:11 PM bug #8228: refresh of details for same object in different bulk editors does not work: please review. Katja Luther
01:39 PM bug #8225 (Resolved): Deleting one of two type designations removes both: This is fixed by fixing #8222.
I already tested on nightly. Patrick Plitzner
01:35 PM bug #8234 (Closed): Move description elements issues: tested on nightly. Works as expected Patrick Plitzner
12:12 PM bug #8234: Move description elements issues: works fine.
waiting for the nightly build to test there again Patrick Plitzner
11:37 AM bug #8234: Move description elements issues: moving descriptions is solved, too.
I reviewed the 2. task and added the removing of the description elements in e... Katja Luther
10:25 AM bug #8234 (Resolved): Move description elements issues: Applied in changeset commit:taxeditor|dc4dc742793f5823f61decb5411f46e9b7a66a05. Katja Luther
09:15 AM bug #8234: Move description elements issues: Moving to unassigned milestone because the critical issue (not removing the description element when moving it to ano... Patrick Plitzner
09:03 AM bug #8234 (Closed): Move description elements issues: 1. ~~Moving description elements is only executed after saving while moving the whole descriptions is executed immedi... Patrick Plitzner
01:04 PM feature request #8146: Adapt taxeditor UI to structure and property term type: Katja Luther wrote:
> Patrick Plitzner wrote:
> > I added the term type for feature trees to the details view. Is t... Patrick Plitzner
12:53 PM feature request #8146: Adapt taxeditor UI to structure and property term type: Patrick Plitzner wrote:
> I added the term type for feature trees to the details view. Is this ok?
> We may think a... Katja Luther
12:51 PM feature request #8146 (Resolved): Adapt taxeditor UI to structure and property term type: Katja Luther wrote:
> Patrick Plitzner wrote:
> > I added the term type for feature trees to the details view. Is t... Patrick Plitzner
12:07 PM feature request #8146 (Feedback): Adapt taxeditor UI to structure and property term type: Patrick Plitzner wrote:
> I added the term type for feature trees to the details view. Is this ok?
> We may think a... Katja Luther
07:59 AM feature request #8146 (Resolved): Adapt taxeditor UI to structure and property term type: I added the term type for feature trees to the details view. Is this ok?
We may think about further options in the n... Patrick Plitzner
01:04 PM feature request #8235 (Closed): Create separate menu for term tree editors for each term tree type: Copied from #8146:
~~We could add the termtype to the label of term trees and terms and maybe make it toggleable i... Patrick Plitzner
12:34 PM bug #8222 (Resolved): Deleting a type designation from a name is directly persisted: Now type designations are deleted via operations which are executed when saving the name editor. Patrick Plitzner
12:22 PM feature request #5873: Implement rights&roles for TaxEditor distribution editor: actually the distribution editor can be opened but the save throws a permission denied exception.
* We need a che... Katja Luther
09:05 AM feature request #7865 (Resolved): Remaining factual data view label issues: The titlecache issue is solved. Some other issues came up while fixing this ticket -> #8234 Patrick Plitzner
07:52 AM feature request #6413 (Resolved): [DISCUSS] How to create type duplicates (e.g. isotypes) for a taxon name: I created a new ticket for the remaining issues. Can we close this ticket now? -> #8233 Patrick Plitzner

04/09/2019

02:37 PM bug #7541: Insufficient rights lead to missing focus in name editor: Andreas Müller wrote:
> Hmm, can someone explain what the expected behavior is? To me it sounds strange that the nam... Katja Luther
12:42 PM feature request #8136: Implement sources for type designations in TaxEditor: Do you have an idea how to improve the selection? Katja Luther
12:13 PM feature request #3836: Implement modifiers and modifying text for Description Elements in TaxEditor: now the modifier section is shown only if the feature has recommended modifier voc, so it is hided for all features i... Katja Luther
12:07 PM feature request #8096 (Resolved): Implement CacheUpdater as long running task with correct progress monitoring: the two colons are fixed and for a better result there is a new ticket. Katja Luther
11:09 AM feature request #8096: Implement CacheUpdater as long running task with correct progress monitoring: Andreas Müller wrote:
> If running on multiple classes the update result returns the total number of updated objects... Katja Luther
11:07 AM feature request #8096: Implement CacheUpdater as long running task with correct progress monitoring: Andreas Müller wrote:
> Katja Luther wrote:
> > the problem for references is that if cacheStrategy.getFullAbbrevTi... Katja Luther
11:20 AM feature request #8124 (Resolved): Activate Name Facts in Taxeditor: the issues mentioned above are fixed and for the bulk editor issue a new ticket is created. So I close this ticket. Katja Luther
11:17 AM feature request #8124: Activate Name Facts in Taxeditor: Andreas Müller wrote:
> It would be nice to have a separate label to point out that we are working on name level, no... Katja Luther
09:25 AM feature request #8124: Activate Name Facts in Taxeditor: Katja Luther wrote:
> Andreas Müller wrote:
> > In bulk editor there are 2 strange behaviors which are maybe more b... Katja Luther
09:12 AM feature request #8124: Activate Name Facts in Taxeditor: Andreas Müller wrote:
> In bulk editor there are 2 strange behaviors which are maybe more bulk editor related then n... Katja Luther
11:11 AM feature request #8232 (New): Show updated objects of cache updater separately: Currently, the result of the cache updater is shown as one number but should be separated by the different kind of ob... Katja Luther
10:59 AM bug #8231 (Worksforme): Name relation non: Registration Id: http://phycobank.org/101367
Eunotia kurtkrammeri Kulikovskiy, Lange-Bert., Genkal & Witkowski,
[... Wolf-Henning Kusber
10:09 AM feature request #8230 (Closed): NameTypePopupEditor: genus selectable as the name type for higher ranks: If typified name rank higher than genus, allow genus to be selected as the name type.
[currently only species are ... Wolf-Henning Kusber
09:36 AM bug #8229 (Closed): reload of the bulkeditor does not work correctly: running a new search does not refresh the objects correctly. The bulk editor needs to be closed and reopened. Katja Luther
09:34 AM bug #8228 (Resolved): refresh of details for same object in different bulk editors does not work: this can be fixed with an additional check for the identity of the selection providing part and the activePart, when ... Katja Luther
09:32 AM bug #8228 (Closed): refresh of details for same object in different bulk editors does not work: opening two bulk editors and set the focus on the same objects. When switching between the two bulk editors does not ... Katja Luther

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