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From 08/09/2018 to 09/07/2018

09/07/2018

02:59 PM feature request #7415: Implement ExternalLinks for OriginalSources in TaxEditor
Andreas Müller wrote:
> Katja Luther wrote:
> > this is already i18n because CdmStore.getDefaultLanguage() returns ...
Katja Luther
02:08 PM feature request #7415: Implement ExternalLinks for OriginalSources in TaxEditor
~~Also please move "type" to top.~~ Andreas Müller
02:07 PM feature request #7415: Implement ExternalLinks for OriginalSources in TaxEditor
Can we reduce the space between the 3 fields? Usually I like this but here I think it is better to be compact. Andreas Müller
02:06 PM feature request #7415 (Feedback): Implement ExternalLinks for OriginalSources in TaxEditor
Andreas Müller
02:06 PM feature request #7415: Implement ExternalLinks for OriginalSources in TaxEditor
~~The labels may be shortened "External Link URI" -> "URI" . Same for Type. The "External links" header makes it clea... Andreas Müller
02:04 PM feature request #7415: Implement ExternalLinks for OriginalSources in TaxEditor
Katja Luther wrote:
> this is already i18n because CdmStore.getDefaultLanguage() returns the default language define...
Andreas Müller
01:48 PM feature request #7415 (Resolved): Implement ExternalLinks for OriginalSources in TaxEditor
Katja Luther
12:45 PM feature request #7415: Implement ExternalLinks for OriginalSources in TaxEditor
Andreas Müller wrote:
> For DescriptionElementSources the ExternalLinks appear now above Name in Source. This is bad...
Katja Luther
12:25 PM feature request #7415: Implement ExternalLinks for OriginalSources in TaxEditor
this is already i18n because CdmStore.getDefaultLanguage() returns the default language defined in the preferences or... Katja Luther
09:38 AM feature request #7415: Implement ExternalLinks for OriginalSources in TaxEditor
Katja Luther wrote:
> I can't reproduce this exception, I tested with nightly and rem_conf_am
The exception still...
Andreas Müller
09:21 AM feature request #7415: Implement ExternalLinks for OriginalSources in TaxEditor
For DescriptionElementSources the ExternalLinks appear now above Name in Source. This is bad for UX. We need to put i... Andreas Müller
01:48 PM bug #3535 (Resolved): Automatically update descriptive view if content changed
now only once the user is asked for saving and text is adapted. Katja Luther
12:53 PM bug #3535: Automatically update descriptive view if content changed
Andreas Müller wrote:
> Now, changes in the source are saved properly. Changes in the target are not saved even when...
Katja Luther
12:50 PM bug #3535: Automatically update descriptive view if content changed
Also the request for saving now appears twice if both taxa are dirty. Once before selecting the target, and then afte... Andreas Müller
12:32 PM bug #3535 (Feedback): Automatically update descriptive view if content changed
Andreas Müller
12:31 PM bug #3535: Automatically update descriptive view if content changed
Now, changes in the source are saved properly. Changes in the target are not saved even when choosing "OK" Andreas Müller
12:28 PM bug #3535: Automatically update descriptive view if content changed
It would be nice if the tap order of the editors could be the same as before saving. Currently the order changes whic... Andreas Müller
11:44 AM bug #3535: Automatically update descriptive view if content changed
A minor issue: the processes often take time which is acceptable but an hourglass that the process is still ongoing i... Andreas Müller
01:33 PM bug #7500 (Closed): Can't open both related accepted taxa of reused MAN
Katja Luther
01:22 PM bug #7500 (Feedback): Can't open both related accepted taxa of reused MAN
I slightly changed the text of the selection dialog. Can you pleas check if this is ok.
I think it should appear o...
Andreas Müller
11:13 AM bug #7500 (Resolved): Can't open both related accepted taxa of reused MAN
Katja Luther
11:13 AM bug #7500 (Feedback): Can't open both related accepted taxa of reused MAN
Andreas Müller wrote:
> Now, when trying to open the MANs in a Nameeditor I always get
>
> ![](picture898-1.png)...
Katja Luther
11:10 AM bug #7500 (Resolved): Can't open both related accepted taxa of reused MAN
Applied in changeset commit:taxeditor|a5dfa142a6e4540690c1b4c7f7ed3eaf176272c8. Katja Luther
10:30 AM bug #7500 (Feedback): Can't open both related accepted taxa of reused MAN
Now, when trying to open the MANs in a Nameeditor I always get
![](picture898-1.png)
Maybe I am wrong but also...
Andreas Müller
01:16 PM bug #7743 (Rejected): test application contexts without <context:annotation-config />
rejected since the remote test context is not a full context Andreas Kohlbecker
01:14 PM bug #7743: test application contexts without <context:annotation-config />
add the configuration:
~~~xml
<context:annotation-config />
<context:component-scan base-package="eu/eta...
Andreas Kohlbecker
01:01 PM bug #7743 (Rejected): test application contexts without <context:annotation-config />
the configuration `<context:annotation-config/>` to enable the annotation based spring configuration is missing in so... Andreas Kohlbecker
01:05 PM feature request #7726 (Feedback): Change label of "Abbrev. Title Cache" to "Nomenclatural Cache" ...
Now again we have a line break for some labels which is not good for UX and not necessary I think.
Maybe this is OS ...
Andreas Müller
12:19 PM feature request #7726 (Resolved): Change label of "Abbrev. Title Cache" to "Nomenclatural Cache" ...
Patrick Plitzner
11:19 AM feature request #7726 (Feedback): Change label of "Abbrev. Title Cache" to "Nomenclatural Cache" ...
Again, in my original mail I mentioned to maybe change both, Nomenclatural title and Nomenclatural cache to Nomencl. ... Andreas Müller
10:23 AM feature request #7726 (Resolved): Change label of "Abbrev. Title Cache" to "Nomenclatural Cache" ...
Patrick Plitzner
09:15 AM feature request #7726 (Feedback): Change label of "Abbrev. Title Cache" to "Nomenclatural Cache" ...
As mentioned in the original mail (please always copy these mails completely - or at least the part that is relevant ... Andreas Müller
12:54 PM feature request #7715 (Closed): Description sources should be handled same as DescriptionElement
Andreas Müller
11:27 AM feature request #7715: Description sources should be handled same as DescriptionElement
changed the label of descriptions and descriptionelements sources to sources Katja Luther
11:10 AM feature request #7715 (Resolved): Description sources should be handled same as DescriptionElement
Applied in changeset commit:taxeditor|b717449e43d02a06fe22849e383f8a6e922682aa. Katja Luther
09:48 AM feature request #7715: Description sources should be handled same as DescriptionElement
Generally this ticket is ready and can be closed. Andreas Müller
09:48 AM feature request #7715 (Feedback): Description sources should be handled same as DescriptionElement
Andreas Müller wrote:
> The section is called "Description Sources" we should either relabel them "References" as in...
Andreas Müller
11:33 AM bug #7742 (In Progress): vaadin view presenters not disposing ehcaches and object references in e...
Andreas Kohlbecker
11:32 AM bug #7742 (Closed): vaadin view presenters not disposing ehcaches and object references in event ...
Andreas Kohlbecker
11:09 AM bug #7729 (In Progress): potential ehcache CacheConfiguration problem
Andreas Kohlbecker
11:07 AM bug #7729: potential ehcache CacheConfiguration problem
There are a couple of ehcaches being used in the cdmlib and in cdm-vaadin which need different configurations:
1) ...
Andreas Kohlbecker
10:51 AM bug #6850 (Closed): NPE when clearing label of "kind of" term in TermEditor
Andreas Müller wrote:
> Much better now. Only the Supplemental data do not automatically synchronize their label. Do...
Patrick Plitzner
09:54 AM bug #6850 (Feedback): NPE when clearing label of "kind of" term in TermEditor
Much better now. Only the Supplemental data do not automatically synchronize their label. Don't know if this is a gen... Andreas Müller
10:50 AM feature request #7741 (New): Refresh supplemental data view title when editing terms
Copied from #6973 and #6850
When editing the label of terms in the details view the label is not reflected immedia...
Patrick Plitzner
10:17 AM feature request #7740 (New): Extract RCP styling to css file
Many colors, font sizes and font styles can be defined declaratively in an external CSS file instead of in Java.
S...
Patrick Plitzner
10:06 AM bug #7739 (New): If a volatile synonym is changed to a MAN it is not necessary to save first
Currently when creating a MAN by first creating a synonym and then changing it to MAN WITHOUT saving the synonym befo... Andreas Müller
09:18 AM feature request #7717 (Closed): Implement "continued" in TimePeriod UI
It works well now and is also intuitive IMO. Andreas Müller
09:06 AM bug #7738 (Closed): NPE for cancel in Use existing media dialog of specimen tree editor
I did not really test explicitly but the code looks reasonable Andreas Müller
08:57 AM bug #7738: NPE for cancel in Use existing media dialog of specimen tree editor
exception was
~~~
login : admin
editor version : 5.3.0.201809042248
server : test.e-taxonomy.eu (edit-test) / r...
Andreas Müller
08:30 AM bug #7738 (Resolved): NPE for cancel in Use existing media dialog of specimen tree editor
Applied in changeset commit:taxeditor|62079f0371543d34bde1fe550ecee2c0f7ea13eb. Patrick Plitzner
08:30 AM bug #7738 (Closed): NPE for cancel in Use existing media dialog of specimen tree editor
Patrick Plitzner

09/06/2018

12:17 AM bug #7736 (Duplicate): reusing media in the DescriptionElementDetailsView
Andreas Müller
12:02 AM bug #7736 (Duplicate): reusing media in the DescriptionElementDetailsView
reusing media in the DescriptionElementDetailsView is not yet possible but should (needs discussion how the multiple ... Andreas Müller
12:09 AM bug #7737 (Closed): Reference Details view does NOT give a multiple usage warning
copied from #7706
testing other such warnings I realized that for references the warnings appear in the dialog but...
Andreas Müller
12:07 AM bug #7733: show warning for multiple usage of media for SpecimenMedia
remove first part of description as it has nothing to do with MediaSpecimen. It is handled in #7736 now in more complete Andreas Müller
09:35 PM bug #7733 (New): show warning for multiple usage of media for SpecimenMedia
copied from #7706:
the warning is not shown in the Specimen Tree Editor for Media specimen. This is probably becau...
Katja Luther
09:39 PM feature request #7706 (Closed): Warning for reused Media is missing
create several follow up tickets (#7732, #7733, #7734) Katja Luther
09:39 PM bug #7735 (New): reusing media in the DescriptionElementDetailsView
copied from #7706:
reusing media in the DescriptionElementDetailsView is not yet possible but should (the multiple...
Katja Luther
09:38 PM bug #7734 (New): show warning for multiple usage also if the reference is not persisted yet
copied from #7706:
when the new reference to a persisted and linked media object is not yet saved no warning is sh...
Katja Luther
09:33 PM bug #7732 (New): layout issues for the media details view
copied from #7706:

* layout: the form type changer is not moved down and now appears beside the warning. This ...
Katja Luther
09:29 PM bug #7728 (Closed): NPE in wizard when changing type of reference
Katja Luther
09:29 PM bug #7728: NPE in wizard when changing type of reference
works fine. This was something like a copy&paste error because only the indention should be removed Katja Luther
03:54 PM bug #7728 (Resolved): NPE in wizard when changing type of reference
Applied in changeset commit:taxeditor|656cc90a6ba5dbe24426373b9043fe92413bdcb2. Patrick Plitzner
03:52 PM bug #7728: NPE in wizard when changing type of reference
The class DateElement has a DisposeListener that disposes of the cdmFormFactory. But this is not how it should be han... Patrick Plitzner
03:18 PM bug #7728: NPE in wizard when changing type of reference
Patrick Plitzner wrote:
> It actually does not have anything to do with which type you choose or if it is an in-refe...
Patrick Plitzner
03:02 PM bug #7728: NPE in wizard when changing type of reference
It actually does not have anything to do with which type you choose or if it is an in-reference. The error can be rep... Patrick Plitzner
02:58 PM bug #7728: NPE in wizard when changing type of reference
Patrick Plitzner wrote:
> I cannot reproduce this. What exactly did you do?
>
> I opened a taxon in the name edi...
Patrick Plitzner
02:58 PM bug #7728: NPE in wizard when changing type of reference
open a reference and create a new inReference, set the type to webPage, after finish go back to the first reference a... Katja Luther
02:56 PM bug #7728: NPE in wizard when changing type of reference
I cannot reproduce this. What exactly did you do?
I opened a taxon in the name editor -> Opened the reference wiz...
Patrick Plitzner
01:04 PM bug #7728: NPE in wizard when changing type of reference
This problem is caused by a cdmFormFactory which is set to disposed. at the moment we handle widget is disposed excep... Katja Luther
12:59 PM bug #7728 (Closed): NPE in wizard when changing type of reference
Hallo Katja,
Beim Öffnen einer In-Referenz einer Referenz, die selber bereits im Dialog geöffnet ist, kam reproduz...
Katja Luther
09:06 PM bug #3535 (Resolved): Automatically update descriptive view if content changed
Katja Luther
09:06 PM bug #3535: Automatically update descriptive view if content changed
this ticket is fixed, created a new ticket for not moving image galleries ( #7731) and for the same moving functional... Katja Luther
10:22 AM bug #3535: Automatically update descriptive view if content changed
Andreas Müller wrote:
> Note: when moving full description to another taxon the new label of the description is: "El...
Katja Luther
10:14 AM bug #3535: Automatically update descriptive view if content changed
Andreas Müller wrote:
> Now, the fact is not removed from the old taxon. Only closing and reopening the taxon remove...
Katja Luther
09:40 AM bug #3535: Automatically update descriptive view if content changed
Andreas Müller wrote:
> Note: the selection dialog for the target taxon does show the "start" taxon too. This is not...
Katja Luther
09:33 AM bug #3535: Automatically update descriptive view if content changed
Andreas Müller wrote:
> Katja Luther wrote:
> > this fix was only for the menu entry in taxonnavigator, but I will ...
Katja Luther
08:42 AM bug #3535: Automatically update descriptive view if content changed
But then we should separately allow to also move media/image galleries. Otherwise it is difficult to handle images wh... Andreas Müller
08:05 AM bug #3535: Automatically update descriptive view if content changed
Andreas Müller wrote:
> By the way, moving facts also moves image galleries. For the user this might be unexpected a...
Andreas Kohlbecker
09:06 PM bug #7731 (New): service method for moving descriptions should not move image galleries
this is a follow up ticket for #3535#note-16 Katja Luther
09:04 PM feature request #7730 (New): Add moving functionality to media view
this is a follow up ticket from #3535#note-18 Katja Luther
08:54 PM feature request #7433 (In Progress): new service method to get specimen by genetic AccessionNumber
Katja Luther
08:52 PM bug #5394 (Rejected): Test if synonyms are imported correctly with ABCD import
Katja Luther
08:44 PM feature request #7694 (Duplicate): cdmlight export output of types needs to be adapted
Katja Luther
10:15 AM feature request #7694 (In Progress): cdmlight export output of types needs to be adapted
This is already in progress I guess, together with #7700. How far are these duplicates and how far is this ticket res... Andreas Müller
06:35 PM feature request #7599 (In Progress): treeView for specimen data in dataportal
Katja Luther
06:35 PM feature request #7599: treeView for specimen data in dataportal
the php issues should be solved and the tree view is shown now. Katja Luther
06:11 PM feature request #7599: treeView for specimen data in dataportal
further minor php problems at the example of http://test.e-taxonomy.eu/dataportal/preview/phycobank/cdm_dataportal/ta... Andreas Kohlbecker
02:38 PM feature request #7599: treeView for specimen data in dataportal
php notice in http://test.e-taxonomy.eu/dataportal/preview/cichorieae/cdm_dataportal/taxon/1ad7630a-290b-464f-99e3-43... Andreas Kohlbecker
02:19 PM feature request #7599: treeView for specimen data in dataportal
Andreas Kohlbecker wrote:
> sollte eigentlich nicht in `_description_list_group_add()` hinein. Besser den link sch...
Andreas Kohlbecker
02:18 PM feature request #7599: treeView for specimen data in dataportal
2)
diese neue Funktionalität in `modules/cdm_dataportal/includes/pre-drupal8.inc`
~~~php
if (strpos($desc...
Andreas Kohlbecker
06:18 PM bug #7729 (New): potential ehcache CacheConfiguration problem
the below warnings are reported frequently. ~~Interestingly it happens often short before the server freezes due to o... Andreas Kohlbecker
03:45 PM feature request #7658: use new taxon relationship DTO webservice in portal
& handling does not yet work correctly in teams. Probably a formatter issue #7666.
![](picture944-1.png)
Andreas Müller
03:38 PM feature request #7658: use new taxon relationship DTO webservice in portal
Deduplication must NOT take place if the rel. sec. differs (e.g. only one of the MANs has a rel. sec.). This is not y... Andreas Müller
03:30 PM feature request #7658: use new taxon relationship DTO webservice in portal
Andreas Müller wrote:
> Strange, with this entry:
>
> the webservice even does not return a second entry though i...
Andreas Müller
03:27 PM feature request #7658: use new taxon relationship DTO webservice in portal
Strange, with this entry:
![](picture38-1.png)
the webservice even does not return a second entry though it exi...
Andreas Müller
02:46 PM feature request #7658: use new taxon relationship DTO webservice in portal
But it works when adding an explicit sensu reference. But explicit sensu is not a requirement. Andreas Müller
02:44 PM feature request #7658: use new taxon relationship DTO webservice in portal
Exception for second MAN of Achillea santolinoides Lag.
![](picture970-1.png)
for this data on test.cyprus
!...
Andreas Müller
02:31 PM feature request #7658 (Feedback): use new taxon relationship DTO webservice in portal
Does not yet work for pro parte and partial MANs. Andreas Müller
03:44 PM bug #6276: Nomenclatural references show parsed date string instead of publication year
Sorry, wrong ticket Andreas Müller
01:52 PM bug #7585 (Closed): RegistrationCuratorRoleProbe does not only check the ROLE_CURATION
Andreas Kohlbecker
01:51 PM bug #7585 (Resolved): RegistrationCuratorRoleProbe does not only check the ROLE_CURATION
Applied in changeset commit:cdm-vaadin|e080f6ded006655d94a94b876eb9c1fb2143d60f. Andreas Kohlbecker
01:49 PM feature request #6351 (Closed): jenkins cdmserver-index-job.groovy supports http basic authentic...
Andreas Kohlbecker
11:56 AM feature request #6351 (Worksforme): jenkins cdmserver-index-job.groovy supports http basic authe...
this is already implemented Andreas Kohlbecker
01:37 PM bug #6850 (Resolved): NPE when clearing label of "kind of" term in TermEditor
Patrick Plitzner
08:49 AM bug #6850: NPE when clearing label of "kind of" term in TermEditor
Let's call it different: show the current titleCache, and for a completely empty term the Class+UUID will be generate... Andreas Müller
08:42 AM bug #6850: NPE when clearing label of "kind of" term in TermEditor
So you want the default titleCache (class + UUID) to be shown everywhere except the text field, correct? Patrick Plitzner
01:19 PM feature request #7680: Refactor TaxonNodeDetailElement
the functionality is available now, but as described in the comment above we would need the functionality to create a... Katja Luther
12:53 PM feature request #7717: Implement "continued" in TimePeriod UI
Andreas Müller wrote:
> Best would be to not show the "end" line at all if continued == true
I think it is cleare...
Katja Luther
12:51 PM feature request #7717 (Resolved): Implement "continued" in TimePeriod UI
Applied in changeset commit:taxeditor|a1fbc94af7ad08a851eb87b92e7b8aa34b1f6a89. Katja Luther
12:30 PM bug #7500: Can't open both related accepted taxa of reused MAN
now the chooseAcceptedTaxon dialog also used if a taxon is used as MAN and accepted taxon Katja Luther
11:47 AM bug #7500: Can't open both related accepted taxa of reused MAN
?? Andreas Müller
12:15 PM feature request #7727 (New): Server availability indication in TaxEditor
Split from #5209:
We may also think about having a status line icon/label which permanently (every 2-3 seconds) ch...
Andreas Müller
12:06 PM feature request #7726 (Resolved): Change label of "Abbrev. Title Cache" to "Nomenclatural Cache" ...
Applied in changeset commit:taxeditor|9f90442961085aa4cca97151bca3ba19ac77520f. Patrick Plitzner
12:05 PM feature request #7726 (Closed): Change label of "Abbrev. Title Cache" to "Nomenclatural Cache" in...
Patrick Plitzner
12:05 PM feature request #5232: use TaxonBase.getTaggedTitle to get the sec reference in theme_cdm_taxonRe...
is this a duplicate for #7658? If yes it can be closed as duplicate. Andreas Müller
11:56 AM feature request #3990: [DISCUSS] How to implement citation suggestion to each taxon
This is critical for version 5.4 as needed for E+M Andreas Müller
11:53 AM feature request #7644: Add "continued" flag to (Verbatim)Timeperiod
Why has this been moved? It was for review. Andreas Müller
11:51 AM feature request #7725: Implement server availability check
Andreas Kohlbecker wrote:
> Using the same service endpoint, with a HTTP HEAD requests you will check for the availa...
Andreas Müller
10:48 AM feature request #7725: Implement server availability check
> We may also want to have 2 services, one for checking availability of the server (without DB check) and one checkin... Andreas Kohlbecker
10:31 AM feature request #7725 (New): Implement server availability check
Split from #5209:
Applications may need to check if the server is available.
These services could be used for t...
Patrick Plitzner
10:47 AM feature request #5209: Improve server availability check
Patrick Plitzner wrote:
> Andreas Müller wrote:
> > Shouldn't we split this ticket. This one stays a "how to handle...
Andreas Müller
10:31 AM feature request #5209: Improve server availability check
Andreas Müller wrote:
> Shouldn't we split this ticket. This one stays a "how to handle the exception" best ticket.
...
Patrick Plitzner
10:22 AM feature request #5209: Improve server availability check
Shouldn't we split this ticket. This one stays a "how to handle the exception" best ticket.
And then we need a sep...
Andreas Müller
08:05 AM feature request #5209: Improve server availability check
Copied from #6355:
In the above case the interruption took place during lazy initialization:
~~~
login : w.ber...
Patrick Plitzner
08:04 AM feature request #5209 (New): Improve server availability check
Copied from #6355:
Andreas M.:
"wie schon öfters erwähnt, sollten wir hier ja versuchen, eine nutzerfreundlichere...
Patrick Plitzner
08:01 AM feature request #5209 (Duplicate): Improve server availability check
Patrick Plitzner
09:57 AM bug #5430 (New): P2 update of Taxonomic Editor bundled with JRE does not work
Patrick Plitzner
08:01 AM task #6736 (Duplicate): Handle server not available user friendly
Patrick Plitzner
08:01 AM bug #6355 (Duplicate): Improve message if server is down
Patrick Plitzner

09/05/2018

12:01 AM feature request #4028 (Resolved): Distinguish Features and Characters
Check if this is fully handled (a duplicate) of #6618 Andreas Müller
11:24 PM bug #7677 (Closed): Nomenclatural Status is always set to nom illeg in details view
It seems to work now as expected. Andreas Müller
04:27 PM feature request #7717 (Feedback): Implement "continued" in TimePeriod UI
Andreas Müller
03:57 PM feature request #7717: Implement "continued" in TimePeriod UI
Best would be to not show the "end" line at all if continued == true Andreas Müller
03:55 PM feature request #7717: Implement "continued" in TimePeriod UI
Also I would move the continued flag up, before "End" as it is something inbetween start and end. This may make the b... Andreas Müller
03:50 PM feature request #7717: Implement "continued" in TimePeriod UI
I don't know if this is related, but when entering data into the parse field now, the cursor always jumps to the begi... Andreas Müller
12:59 PM feature request #7717 (Resolved): Implement "continued" in TimePeriod UI
Katja Luther
12:59 PM feature request #7717 (New): Implement "continued" in TimePeriod UI
the continued flag is implemented in editor now. at the moment the end date is removed when the continued flag is set... Katja Luther
12:56 PM feature request #7717 (Resolved): Implement "continued" in TimePeriod UI
Applied in changeset commit:taxeditor|f36a68ee91d7e3c3c8365b13507c25af4da48b81. Katja Luther
03:56 PM feature request #7599: treeView for specimen data in dataportal
Review Result:
1)
* method `create_cdm_specimen_or_observation()` needs either be named `render_cdm_specimen_o...
Andreas Kohlbecker
03:42 PM feature request #7599 (Resolved): treeView for specimen data in dataportal
starting review
Andreas Kohlbecker
03:43 PM bug #3535: Automatically update descriptive view if content changed
By the way, moving facts also moves image galleries. For the user this might be unexpected as for the user it is not ... Andreas Müller
03:39 PM bug #3535: Automatically update descriptive view if content changed
Katja Luther wrote:
> this fix was only for the menu entry in taxonnavigator, but I will have a look at the problems...
Andreas Müller
03:31 PM bug #3535: Automatically update descriptive view if content changed
Upps, even more critical. Even selecting "Cancel" does not cancel the operation but still saves the target data and a... Andreas Müller
03:18 PM bug #3535: Automatically update descriptive view if content changed
this fix was only for the menu entry in taxonnavigator, but I will have a look at the problems in factual data view. Katja Luther
02:55 PM bug #3535: Automatically update descriptive view if content changed
If the target taxon is dirty and unsaved and gives a warning. It says ".... all other unsaved changes will be saved".... Andreas Müller
02:46 PM bug #3535: Automatically update descriptive view if content changed
Andreas Müller wrote:
> Now, the fact is not removed from the old taxon. Only closing and reopening the taxon remove...
Andreas Müller
02:43 PM bug #3535: Automatically update descriptive view if content changed
Note: ~~~when moving full description to another taxon the new label of the description is: "Elements moved from ..."... Andreas Müller
02:41 PM bug #3535: Automatically update descriptive view if content changed
Moving the full description seems to work correctly. Andreas Müller
02:36 PM bug #3535 (Feedback): Automatically update descriptive view if content changed
~~~Now, the fact is not removed from the old taxon. Only closing and reopening the taxon removes it.
I tested this f...
Andreas Müller
02:32 PM bug #3535: Automatically update descriptive view if content changed
Note: ~~the selection dialog for the target taxon does show the "start" taxon too. This is not needed and should be f... Andreas Müller
03:42 PM bug #7722 (Closed): NamePopupEditor: validation not working for rank genus
perfect ! Wolf-Henning Kusber
02:47 PM bug #7722: NamePopupEditor: validation not working for rank genus
solved, please review Andreas Kohlbecker
02:46 PM bug #7722 (Resolved): NamePopupEditor: validation not working for rank genus
Applied in changeset commit:cdm-vaadin|e8e0ad3ba36e287dc5fc1c398bc505f3f0a5a38e. Andreas Kohlbecker
02:04 PM bug #7722: NamePopupEditor: validation not working for rank genus
It could be that people validate higher rank names, too. Wolf-Henning Kusber
03:05 PM feature request #7700: use TypeDesignationSetManager for creating typedesignation string in cdmli...
the mail from WB:
Hallo,
habe mir das angesehen. Es gibt ja praktisch 3 Fälle.
1. Gesamte information ist im ...
Katja Luther
03:03 PM feature request #7700 (Resolved): use TypeDesignationSetManager for creating typedesignation stri...
Katja Luther
02:27 PM bug #6742: IAE when using "Link with taxon selection" in Specimen-Editor
I did not get the IAE anymore but also could not create any result. I tried to
* Select or not select a taxon in ...
Andreas Müller
01:59 PM bug #4573 (Closed): Handle duplicate username, group or grantedAuthority correctly
Works fine Andreas Müller
01:49 PM feature request #7712 (Closed): PhycoBank UI Reference detail size
perfect! Wolf-Henning Kusber
01:48 PM feature request #7624 (Closed): Note field for Reference in Vaadin
Perfect! Wolf-Henning Kusber
11:11 AM feature request #7624: Note field for Reference in Vaadin
please review Andreas Kohlbecker
01:45 PM bug #7724 (New): PatternSyntaxException in GrantedAuthority search dialog
See stacktrace. I looked at the code and wondered why first ALL GAs are loaded and then compared via regex. Is this s... Andreas Müller
01:22 PM feature request #6475 (Closed): Make specimen tree editor collapsable and expandable
Seems to work (though it took me some time to find the buttons. But it is general RCP way of putting them so it shoul... Andreas Müller
12:48 PM bug #6850: NPE when clearing label of "kind of" term in TermEditor
Generally this seems to work now. I also could not reproduce.
Only related issue: with empty label the label refre...
Andreas Müller
12:37 PM bug #7371 (Closed): Deleting Polytomous Key throws NPE
Works fine with nightly. Andreas Müller
12:22 PM bug #7371 (Resolved): Deleting Polytomous Key throws NPE
... upps sorry, looks like I tested with production on test server , will test again Andreas Müller
12:21 PM bug #7371 (Feedback): Deleting Polytomous Key throws NPE
I still get
~~~
login : admin
editor version : 5.2.1
server : test.e-taxonomy.eu (edit-test) / rem_conf_am
...
Andreas Müller
12:35 PM feature request #7644: Add "continued" flag to (Verbatim)Timeperiod
Katja Luther wrote:
> if the continued flag is set and then setContinued(false) is called, this.end should be set to...
Andreas Müller
12:24 PM feature request #7644: Add "continued" flag to (Verbatim)Timeperiod
if the continued flag is set and then setContinued(false) is called, this.end should be set to null Katja Luther
09:22 AM feature request #7644: Add "continued" flag to (Verbatim)Timeperiod
Can you please review? (Katja can you maybe also shortly review?) Andreas Müller
12:03 PM bug #7622 (Closed): RegistrationWorkingsetEditor: navigating to other pages with fresh registrati...
no empty registrations since this has been fixed. Andreas Kohlbecker
12:02 PM bug #7622: RegistrationWorkingsetEditor: navigating to other pages with fresh registrations leave...
this was originally a dataportal ticket which has erroneously be overwritten with other information. There is a new t... Andreas Kohlbecker
12:01 PM bug #7667: NoHttpResponseException for large queries in bulk editor
Difficult to test. Currently the test server does not respond very often. So it can't be decided if this is related.
...
Andreas Müller
11:54 AM feature request #7715 (Resolved): Description sources should be handled same as DescriptionElement
Applied in changeset commit:taxeditor|d2c62a2b15901df2b03ad04d2f384f523d781492. Katja Luther
09:20 AM feature request #7715: Description sources should be handled same as DescriptionElement
The section is called "Description Sources" we should either relabel them "References" as in DescriptionElementDetail... Andreas Müller
09:14 AM feature request #7715: Description sources should be handled same as DescriptionElement
Generally we need to discuss if moving the sources from Supplemental Data to Details View means removing them at firs... Andreas Müller
09:12 AM feature request #7715 (Feedback): Description sources should be handled same as DescriptionElement
Generally it works, but there comes a selection dialog for choosing the source type. This needs to be removed as for ... Andreas Müller
11:52 AM bug #7699: NPE when searching for specimen in bulk editor
Added AK as this is maybe a general ticket about handling of disposed in CdmTransientEntityCacher so might be interes... Andreas Müller
11:50 AM bug #7699: NPE when searching for specimen in bulk editor
It still exists sometimes
~~~
login :
editor version : 5.3.0.201809042248
server : ()
schema version :
os...
Andreas Müller
11:35 AM feature request #7415: Implement ExternalLinks for OriginalSources in TaxEditor
I can't reproduce this exception, I tested with nightly and rem_conf_am Katja Luther
10:43 AM feature request #7415 (Feedback): Implement ExternalLinks for OriginalSources in TaxEditor
Adding an external link throws NPE
~~~
login : admin
editor version : 5.3.0.201809042248
server : test.e-taxon...
Andreas Müller
09:14 AM feature request #7415 (Resolved): Implement ExternalLinks for OriginalSources in TaxEditor
Katja Luther
11:25 AM bug #7294: keys block can not be disabled in tabless taxon page
review after release Andreas Kohlbecker
11:25 AM bug #7691: Empty "Bibliography" section
review after release Andreas Kohlbecker
11:21 AM bug #7582 (Duplicate): prevent from creating empty registrations
Andreas Kohlbecker
11:12 AM bug #7702 (Closed): corrupted hibernate session after previous error during save operation
hard to review - time will show - closing ticket Andreas Kohlbecker
10:58 AM feature request #7412 (Closed): Allow editing supplemental data for DescriptiveDataSets
Seems to work as expected Andreas Müller
10:15 AM bug #7484 (Closed): Protected titleCache handling not correct in Reference detail view
This specific issue seems to work consistent now.
General review of titleCache behavior is still open for review ...
Andreas Müller
09:01 AM feature request #7706: Warning for reused Media is missing
Is there a Media editing dialog at all? I was searching to check if the warning also works there but didn't find any.... Andreas Müller
08:50 AM feature request #7706 (Feedback): Warning for reused Media is missing
Generally the ticket can be closed as it works if the above issues are either closed or moved to a new ticket. Andreas Müller
08:49 AM feature request #7706: Warning for reused Media is missing
Generally it works but there are some questions regarding various issues:
* layout: the form type changer is not ...
Andreas Müller
07:56 AM bug #7698: CCE when creating new datasource
works fine Andreas Müller
07:55 AM bug #7698 (Closed): CCE when creating new datasource
Andreas Müller

09/04/2018

06:03 PM bug #7723 (Closed): PhycoBank unpublished data must not be visible in Portal
Unpublished data visible in Portal, not in scientific name search, but as list under a reference including published ... Wolf-Henning Kusber
04:34 PM bug #7722 (Feedback): NamePopupEditor: validation not working for rank genus
the validation has explicitly limited to ranks at SpeciesOrBelow. Is it sufficient to also include genus an below or ... Andreas Kohlbecker
02:03 PM bug #7722 (Closed): NamePopupEditor: validation not working for rank genus
Validation button of genus without function (basionym, replaced syn. okay)
![] (picture672-1.png)
Wolf-Henning Kusber
04:01 PM bug #7582 (Resolved): prevent from creating empty registrations
this has been solved mean while. Add according commits to the issue and close it. Andreas Kohlbecker
04:00 PM feature request #7712: PhycoBank UI Reference detail size
fixed, please review Andreas Kohlbecker
04:00 PM feature request #7712 (Resolved): PhycoBank UI Reference detail size
Applied in changeset commit:cdm-vaadin|8626f58493068136e66ff322a6834ce24cf53310. Andreas Kohlbecker
12:03 PM feature request #7712: PhycoBank UI Reference detail size
place citation detail below reference field and make both 100%wide Andreas Kohlbecker
03:17 PM feature request #7624 (Resolved): Note field for Reference in Vaadin
Applied in changeset commit:cdm-vaadin|85743e03023024ec6a9d0449fa91aa6bc08f5f6e. Andreas Kohlbecker
03:16 PM feature request #7600: public setters for entity collections
with commmit:a55fe58a I implemented the suggested setter for annotations. This implementation is not generic and shou... Andreas Kohlbecker
01:59 PM bug #7721 (Rejected): Contraint Violation Exception on saving Reference Popup Editor

der Fehler trat auf, als in einem Workingset in Vaadin in einer Referenz eine Section angelegt worden war (Submitte...
Andreas Kohlbecker
01:58 PM feature request #7706 (Resolved): Warning for reused Media is missing
please review Katja Luther
01:49 PM feature request #7644 (Resolved): Add "continued" flag to (Verbatim)Timeperiod
Applied in changeset commit:cdmlib|72b0e291fb98b3dcab357b7b5f0160bb8818a000. Andreas Müller
09:52 AM feature request #7644: Add "continued" flag to (Verbatim)Timeperiod
We may not need a model change for this.
Instead we use a defined constant end date 9999-12-30 witch stands for "c...
Andreas Müller
01:44 PM feature request #7658 (Resolved): use new taxon relationship DTO webservice in portal
implementation complete, please review Andreas Kohlbecker
01:43 PM feature request #7720 (Resolved): use new taxonRelationshipsDTO webservice for all taxon relations
for details see #6682
since completion of #7658 the taxonRelationshipsDTO is used for misapplied names and invlali...
Andreas Kohlbecker
01:24 PM bug #7719 (New): UX Problems with context menu access in Bulkeditors
in den Bulkeditoren kann man keine neuen Entities anlegen, ohne dass die Tabelle zu sehen ist.
Klickt man nicht auf...
Andreas Kohlbecker
11:17 AM feature request #7666: Remaining issues for "Formatter and DTO for taxon relationships (e.g. misa...
Andreas Kohlbecker wrote:
> the NARROW_NO_BREAK is now a constant in the UTF8 class.
>
> But what about the
>
...
Andreas Müller
10:59 AM feature request #7666: Remaining issues for "Formatter and DTO for taxon relationships (e.g. misa...
Andreas Müller wrote:
> should we change Assignee of this ticket?
No need to, the NARROW_NO_BREAK is now a consta...
Andreas Kohlbecker
09:45 AM feature request #7666: Remaining issues for "Formatter and DTO for taxon relationships (e.g. misa...
should we change Assignee of this ticket? Andreas Müller
09:44 AM feature request #7666: Remaining issues for "Formatter and DTO for taxon relationships (e.g. misa...
When implementing:
>add NARROW NO-BREAK (\u202F) after doubtful marker as requested in #5492
can you please add...
Andreas Müller
10:38 AM feature request #7718 (Closed): New Registration: Exclude irrelevant reference types from list of...
Problem 1
In einem WorkingSet (Buch) sind Dutzende Arten neu beschieben. Die Buchreferenz sollte ein mal vorhanden ...
Wolf-Henning Kusber
10:23 AM feature request #7717: Implement "continued" in TimePeriod UI
for the expected behavior see also TimePeriodTest.testContinued and .testToStringTimePeriod Andreas Müller
09:55 AM feature request #7717 (Closed): Implement "continued" in TimePeriod UI
The continued flag should be alternative to the end date. As described in #7644 either the flag is set or we have an ... Andreas Müller
09:40 AM feature request #5882: option (as new default) to show full citation of accepted name below taxon...
I can not really see why this **follows** the last scrutiny ticket.
**This** ticket is about nomenclatural referen...
Andreas Müller

09/03/2018

03:14 PM feature request #7412 (Resolved): Allow editing supplemental data for DescriptiveDataSets
Applied in changeset commit:taxeditor|0186b94d518629ffe1e2c7cb0c4ad0ee59605002. Patrick Plitzner
02:45 PM feature request #7715 (Resolved): Description sources should be handled same as DescriptionElement
Applied in changeset commit:taxeditor|472f773b8ac025f074ab28f5ef674533cda95717. Patrick Plitzner
11:53 AM feature request #7715 (Closed): Description sources should be handled same as DescriptionElement
Description sources are currently in supplemental data, DescriptionElement in Details view.
Both should be in Deta...
Andreas Müller
02:28 PM bug #3992 (In Progress): [CHECK] Use last scrutiny instead of sec reference
Last scrutiny is now imported as sec references for those taxa having a last scrutiny information. Otherwise PTaxon.p... Andreas Müller
02:24 PM feature request #3990: [DISCUSS] How to implement citation suggestion to each taxon
The former citations suggestions (deriving from the last scrutiny references, PTaxon.lastScrutinyFk) are now imported... Andreas Müller
01:32 PM task #7553 (Closed): move TypeDesignationSetManagerIT to cdmlib
All tests on integration server where successful, so we can close this issue. Andreas Kohlbecker
12:12 PM task #7553 (Resolved): move TypeDesignationSetManagerIT to cdmlib
please review Katja Luther
12:03 PM feature request #1847 (Rejected): Apply description sources (references) for a DescriptionBase to...
This is not primarily a taxeditor ticket therefore I close it but open a similar ticket for cdmlib services: #7716 Andreas Müller
12:01 PM bug #7716 (New): Apply description sources (references) for a DescriptionBase to all included des...
Currently webservices, exports, dataportal and aggregation algorithms do not include source of Description for Descri... Andreas Müller
11:00 AM feature request #674: Turn off all concept-related functionality in the Editor in Preferences
The idea is to simplify the UI for standard users Andreas Müller

09/01/2018

06:29 PM feature request #7714 (Rejected): PhycoBank UI Restrictions for reference types
Do not allow registrations under Reference types "Journal", "Printseries"
1. there are nomenclatural acts in artic...
Wolf-Henning Kusber
09:17 AM task #7713: Atomize last scrutiny references
Find last scrutiny references not in use:
~~~
SELECT *
FROM Reference AS r
WHERE (RefId NOT IN
(SELECT L...
Andreas Müller
08:26 AM task #7713: Atomize last scrutiny references
~~~
SELECT RefId, Notes, RefYear, RefCategoryFk, RefCache, NomRefCache, PreliminaryFlag, InRefFk, Title, NomTitleAb...
Andreas Müller

08/31/2018

11:20 PM task #7713 (In Progress): Atomize last scrutiny references
Andreas Müller
11:17 PM task #7713 (In Progress): Atomize last scrutiny references
Last scrutiny references currently are all(?) flat and with protected cache. They should:
* ~~use inreferences (s...
Andreas Müller
06:18 PM feature request #7712 (Closed): PhycoBank UI Reference detail size
Field "Reference detail" not long enough for standard entries,
e.g. 100, pl. 100, fig. 50-60 (see screen shot)
Prob...
Wolf-Henning Kusber
11:08 AM feature request #7666: Remaining issues for "Formatter and DTO for taxon relationships (e.g. misa...
Ok from this future perspective it makes sense to decouple the loading of the references and the display of the MANs.... Andreas Kohlbecker

08/30/2018

01:47 AM bug #7711 (New): Bugs in media gallery
* when removing a Media from image gallery it is immediately saved but should be saved only after save command, inste... Andreas Müller
12:33 AM bug #7709 (In Progress): CdmTransientEntityCacher cannot handle multiple unpersisted entities of ...
I reverted using UUID as key in CdmEntityCacheKey because
* the eu.etaxonomy.cdm.cache.CdmTransientEntityCacher s...
Andreas Müller
03:13 PM bug #7709: CdmTransientEntityCacher cannot handle multiple unpersisted entities of the same type
Andreas Kohlbecker wrote:
> I forgot one thing:
>
> I am a bit frightend about the change you made in the cacher ...
Andreas Müller
03:11 PM bug #7709: CdmTransientEntityCacher cannot handle multiple unpersisted entities of the same type
I discussed with Katja the handling of un-persisted objects. She also thinks that unpersisted objects should/are not ... Andreas Müller
02:20 PM bug #7709: CdmTransientEntityCacher cannot handle multiple unpersisted entities of the same type
I forgot one thing:
I am a bit frightend about the change you made in the cacher as this is touching an essential ...
Andreas Kohlbecker
02:17 PM bug #7709: CdmTransientEntityCacher cannot handle multiple unpersisted entities of the same type
Andreas Müller wrote:
> Can you please check if this implementation solves your problems
My problem has been sol...
Andreas Kohlbecker
02:12 PM bug #7709: CdmTransientEntityCacher cannot handle multiple unpersisted entities of the same type
Andreas Müller wrote:
> Is this on purpose assigned to me?
>
You are the default assignee for cdmlib, as this t...
Andreas Kohlbecker
02:10 PM bug #7709 (Feedback): CdmTransientEntityCacher cannot handle multiple unpersisted entities of the...
Can you please check if this implementation solves your problems and if you generally agree with the implementation?
...
Andreas Müller
02:06 PM bug #7709 (Resolved): CdmTransientEntityCacher cannot handle multiple unpersisted entities of the...
Applied in changeset commit:cdmlib|67ff6af5f4a24c899385e13c671c8071d301f3e7. Andreas Müller
01:39 PM bug #7709: CdmTransientEntityCacher cannot handle multiple unpersisted entities of the same type
With commit c5eb9820 I introduced more generics to the cacher (not yet 100% finished). Maybe we need to adapt externa... Andreas Müller
01:33 PM bug #7709 (In Progress): CdmTransientEntityCacher cannot handle multiple unpersisted entities of ...
Is this on purpose assigned to me?
If yes, please give more info what is meant by PersonField. PersonField is not ...
Andreas Müller
12:15 PM bug #7709 (In Progress): CdmTransientEntityCacher cannot handle multiple unpersisted entities of ...

the following code would fail:
~~~java
newP1 = Person.NewInstance();
newP2 = Person.NewInstance();
pf1 = ...
Andreas Kohlbecker
06:34 PM bug #7641 (Closed): Reference editor: Error when incerting several new authors into a new author ...
Test 1: #3, #6, 3.screenshot: fehlerhaftes Team komplett gelöscht und neu angelegt mit 2 Autoren aus der Liste und 2 ... Wolf-Henning Kusber
12:22 PM bug #7641: Reference editor: Error when incerting several new authors into a new author team
Problem solved, please test. Andreas Kohlbecker
12:20 PM bug #7641 (Resolved): Reference editor: Error when incerting several new authors into a new autho...
Applied in changeset commit:cdm-vaadin|fe3180d3be765b382f150b613f9936c711af9823. Andreas Kohlbecker
06:11 PM feature request #7666 (In Progress): Remaining issues for "Formatter and DTO for taxon relationsh...
Andreas Kohlbecker wrote:
> A disadvantage of the current implememtation of the taxon relationships webservice and D...
Andreas Müller
05:08 PM feature request #7666: Remaining issues for "Formatter and DTO for taxon relationships (e.g. misa...
A disadvantage of the current implememtation of the taxon relationships webservice and DTO when being used in the dat... Andreas Kohlbecker
02:39 PM task #7553: move TypeDesignationSetManagerIT to cdmlib
Hallo Katja, könnntest du dieses ticket übernehmen?
Andreas
Andreas Kohlbecker
01:30 PM bug #7710 (New): Server info is missing in case of RemoteAccessException
The method `MessagingUtils.getContextInfo()` generates the info.
It seems like `CdmStore.getActiveCdmSource()` ret...
Patrick Plitzner
11:45 AM bug #7686 (Resolved): Specimen title cache issues in data portal specimen table
All the UI issues have been solved.
The issue with the DerivedUnit with no FieldUnit is handled in #7704
Patrick Plitzner
11:24 AM feature request #5972: Prevent user from unwanted author and reference updates
> we might also handle this via rights&roles but probably this is not adequate. Generally we allow those users to upd... Andreas Kohlbecker
11:15 AM feature request #7708 (New): Unify handling of i18n title/representation in identifiable entities
Copied from #7707:
Also there are IdentifiableEntity someclasses which have similar but not equal data structures ...
Andreas Müller
11:13 AM feature request #7707 (New): Handle title / titleCache similar to Media in Classification and oth...
In #7705 the best way to handle i18n-title and titleCache in the UI for classes with "simple titleCache" (titleCache ... Andreas Müller
10:58 AM task #6864 (Duplicate): [DISCUSS] Title and titleCache in Media
This is mostly a duplicate for #7705 Andreas Müller
10:48 AM feature request #7706 (Closed): Warning for reused Media is missing
If Media is linked from multiple data the according warning is missing in the details view. This is critical.
===
...
Andreas Müller
10:45 AM feature request #7705: Improve handling of title/titleCache and multi-language support for Media
Katja, Patrick: do you think we can move this ticket to one of the current target versions (5.3 or 5.4)? Andreas Müller
10:30 AM feature request #7705 (New): Improve handling of title/titleCache and multi-language support for ...
We need i18n support for Media title and description if i18n support is switched on in preferences.
Also we to edi...
Andreas Müller
09:46 AM feature request #7704: Dataportal specimen table should be able to show DerivedUnits without a Fi...
Patrick Plitzner wrote:
> This case can happen for type specimens that were created without a FieldUnit and just ass...
Andreas Müller
08:04 AM feature request #7704 (New): Dataportal specimen table should be able to show DerivedUnits withou...
The current implementation of the specimen table works only on FieldUnits. Each row represents a FieldUnit and if ext... Patrick Plitzner
07:57 AM bug #7703 (New): Multiple names cannot be shown in TypeDesignationDetailElement for specimens
If a SpecimenTypeDesignation has more than one name set as `typifiedName` the DetailsView shows the following:
![]...
Patrick Plitzner

08/29/2018

06:50 PM bug #7702 (Resolved): corrupted hibernate session after previous error during save operation
Applied in changeset commit:cdm-vaadin|7450d44bf31c73a41b69d836d1b87f0305784ad7. Andreas Kohlbecker
06:11 PM bug #7702 (Closed): corrupted hibernate session after previous error during save operation
This is the same problem as in #7559
the bug has not 100% been fixed be the changes made last time.
After this ...
Andreas Kohlbecker
04:54 PM bug #7667 (Feedback): NoHttpResponseException for large queries in bulk editor
I could not reproduce this anymore.
I tested on production and test server.
Patrick Plitzner
04:28 PM bug #7528 (Closed): Allow changing the Registration status in the RegistrationWorkingsetEditor
For curators all status are available but the selection of the available status is limited to guarantee a directed an... Andreas Kohlbecker
03:20 PM feature request #7701 (New): Add link to typified name on specimen page of data portal
"Anmerkung: Auf der Specimen Seite fehlt noch ein Link auf den typifizierten Namen, entsprechend den associated taxa." Patrick Plitzner
03:19 PM bug #7686: Specimen title cache issues in data portal specimen table
Andreas M.:
* Gibt der verwendete Webservice grundsätzlich nur Fieldunits oder werden auch DerivedUnits zurückgege...
Patrick Plitzner
03:16 PM bug #7686: Specimen title cache issues in data portal specimen table
Walter:
"Hierzu dann gleich auch noch zwei Anmerkungen:

Den Titel mit der ID ist unschön, zumal ja diese I...
Patrick Plitzner
02:14 PM bug #7699: NPE when searching for specimen in bulk editor
Andreas Müller wrote:
> On rem_conf_am (see stacktrace) and search for "A*"
I cannot reproduce this here either
Patrick Plitzner
01:32 PM bug #7699: NPE when searching for specimen in bulk editor
On rem_conf_am (see stacktrace) and search for "A*" Andreas Müller
01:25 PM bug #7699 (Feedback): NPE when searching for specimen in bulk editor
I cannot reproduce this. On which DB did you test? Does it always happen for any search on any DB? Patrick Plitzner
11:59 AM bug #7699 (Feedback): NPE when searching for specimen in bulk editor
NPE when searching for specimen
~~~
login :
editor version : 5.3.0.201808280657
server : ()
schema version :...
Katja Luther
01:51 PM bug #7500: Can't open both related accepted taxa of reused MAN
Should I already review this ticket? Andreas Müller
01:24 PM bug #7698 (Resolved): CCE when creating new datasource
Applied in changeset commit:taxeditor|954982ef90bc8d6a36def59139fe9e96a2a7becc. Patrick Plitzner
11:06 AM bug #7698 (Closed): CCE when creating new datasource
~~~
login : admin
editor version : 5.3.0.201808280657
server : test.e-taxonomy.eu (edit-test) / rem_conf_am
schem...
Andreas Müller
01:00 PM feature request #7700: use TypeDesignationSetManager for creating typedesignation string in cdmli...
see also #7695
the typedesignationSetManager already do the deduplication of specimen for one homotypical group an...
Katja Luther
01:00 PM feature request #7700 (Resolved): use TypeDesignationSetManager for creating typedesignation stri...
Katja Luther
12:23 PM bug #7371: Deleting Polytomous Key throws NPE
please review Katja Luther
12:23 PM bug #7371 (Resolved): Deleting Polytomous Key throws NPE
Applied in changeset commit:taxeditor|de55078200c8f2e52f4784ed9aa6b1c6611ddb86. Katja Luther
12:16 PM bug #4429 (Rejected): List of available software sites gets overwritten when updating product
Not relevant anymore as update sites are hardcoded now. Andreas Müller
09:21 AM feature request #7695 (In Progress): web service providing compact TypeDesignation representation...
I wonder if we should really require a single name uuid as obligatory input parameter. The semantics of the service s... Andreas Müller

08/28/2018

04:00 PM bug #7692 (Worksforme): Empty "Specimens" section
This is not a bug in the webservice. The Specimen in question actually has no FieldUnit.
So this is primarily a data...
Andreas Kohlbecker
03:48 PM bug #7692: Empty "Specimens" section
The actual problem is that the webservice `portal/taxon/fb987766-3ea5-45e0-a606-ca9b9d1253cf/associatedFieldUnits.jso... Andreas Kohlbecker
03:08 PM bug #7692 (In Progress): Empty "Specimens" section
The web service returns one specimen for this taxon:
http://api.cybertaxonomy.org/caryo_nepenthaceae/occurrence/by...
Andreas Kohlbecker
03:01 PM bug #7691 (Resolved): Empty "Bibliography" section
Applied in changeset commit:cdm-dataportal|850092a77002da04822cb23ce097e58b05ecbd5d. Andreas Kohlbecker
02:31 PM bug #7500 (Resolved): Can't open both related accepted taxa of reused MAN
Applied in changeset commit:taxeditor|c5cfeefde69828735b910d91075f0d7bdb42464f. Katja Luther
01:43 PM bug #7500 (In Progress): Can't open both related accepted taxa of reused MAN
Katja Luther
01:52 PM bug #7693 (Duplicate): keys section can not be hidden in tabless taxon page
this is a duplicate of #7294 Andreas Kohlbecker
07:39 AM bug #7693 (Duplicate): keys section can not be hidden in tabless taxon page
When the tabless taxon page mode is enabled, the "Section/Tab visibility" setting for the "keys" section has no effect. Andreas Kohlbecker
01:48 PM bug #7294 (Resolved): keys block can not be disabled in tabless taxon page
Applied in changeset commit:cdm-dataportal|48a6d7e8e45c3140d00fc2b8ee5b66f472aa5a5a. Andreas Kohlbecker
01:39 PM task #6778: remove big objects from taxeditor git repository
Andreas Kohlbecker wrote:
> Eine weitere Möglichkeit ist der Umzug auf Gitlab.com.
>
> "To celebrate today's good...
Patrick Plitzner
10:57 AM task #6778: remove big objects from taxeditor git repository
Eine weitere Möglichkeit ist der Umzug auf Gitlab.com.
"To celebrate today's good news we've permanently raised ou...
Andreas Kohlbecker
01:30 PM feature request #7680 (In Progress): Refactor TaxonNodeDetailElement
the problems of not visible unplaced, excluded and publish checkboxes are fixed now. But to implement the NewTaxonNod... Katja Luther
12:43 PM bug #6289 (Closed): “Back to images” link as “Back to taxon page” when in table-less mode
fixed and tested Andreas Kohlbecker
12:41 PM bug #6289 (Resolved): “Back to images” link as “Back to taxon page” when in table-less mode
Applied in changeset commit:cdm-dataportal|78bac306ef38b006fb5e622ce73f3ae699e6a10b. Andreas Kohlbecker
12:28 PM bug #7563 (Closed): requests with %2F in URL are rejected by apache
Andreas Kohlbecker
12:28 PM bug #7563 (Resolved): requests with %2F in URL are rejected by apache
Andreas Kohlbecker
11:52 AM bug #7576 (Closed): Set Publish Flag for Subtree Dialog - Problems with Progressmonitor
Ok, the most severe problems seem to be fixed so far. Andreas Kohlbecker
11:47 AM task #7596 (Closed): PhycoBank Portal - Formatting
Andreas Kohlbecker
11:35 AM feature request #7666: Remaining issues for "Formatter and DTO for taxon relationships (e.g. misa...
Problems with current implementation of the new webservice:
1. `relations.representation_L10n` and `relations.repr...
Andreas Kohlbecker
11:09 AM feature request #7695: web service providing compact TypeDesignation representation for homotypic...
The TypeDesignationSetManager needs to be modified, so that it can be used for multiple usecases. By default it valid... Andreas Kohlbecker
10:28 AM feature request #7695: web service providing compact TypeDesignation representation for homotypic...
changing the controller endpoint to `/name/{uuid}/homotypicGroupTypeDesignationsDTO`, issue description updated. Andreas Kohlbecker
09:10 AM feature request #7695 (In Progress): web service providing compact TypeDesignation representation...

The webservice path:
* ~~`typedesignations/byTaxon/{taxon_uuid}`, `typedesignations/byHomotypicalGroup/{group_...
Andreas Kohlbecker
10:51 AM bug #7679 (Closed): NPE when creating root child in classification
OK, seems to work now. Andreas Müller
08:52 AM bug #7679: NPE when creating root child in classification
Andreas Müller wrote:
> Looks like commit 46f913aa went only into the hotfix branch but needs to be committed to bot...
Patrick Plitzner
10:26 AM bug #7677 (Resolved): Nomenclatural Status is always set to nom illeg in details view
Katja Luther
09:20 AM feature request #7696 (New): use compact type representations in the synonymy as provided by the ...

* Source references should be shown as footnotes to the types
Note: see `compose_registation_dto($registration...
Andreas Kohlbecker
09:10 AM feature request #7694 (Duplicate): cdmlight export output of types needs to be adapted

Relativ einfach sollte das (zumindest bei Nepenthes) für die nicht-atomisierten Typenzitate sein; da steht das Ori...
Katja Luther

08/27/2018

10:24 PM bug #7677: Nomenclatural Status is always set to nom illeg in details view
yes you are right, it is better to create a new status with default type nom. illeg. then we do not have to set the s... Katja Luther
08:30 PM bug #7677 (Feedback): Nomenclatural Status is always set to nom illeg in details view
The implementation is still not fully correct. If a NomenclaturalStatus WITHOUT type exists the type will be set to n... Andreas Müller
07:38 PM bug #7681 (Closed): Update date field when editing parse field in TimePeriodElement
Looks fine now.
Only, I would prefer to add some color to the parse field and/or the parse label. But this is not...
Andreas Müller
07:33 PM bug #7679 (Feedback): NPE when creating root child in classification
Looks like commit 46f913aa went only into the hotfix branch but needs to be committed to both branches.
Can't test...
Andreas Müller
03:25 PM bug #7679 (Resolved): NPE when creating root child in classification
Patrick Plitzner
03:00 PM bug #7679 (Feedback): NPE when creating root child in classification
The setting of the publish flag does not yet work in this case. It should either be "true" (but currently is "false")... Andreas Müller
01:49 PM bug #7679 (Resolved): NPE when creating root child in classification
Andreas Müller wrote:
> Can't we put this to resolved already?
As we already moved it to 5.2 because of the hotfi...
Patrick Plitzner
01:30 PM bug #7679: NPE when creating root child in classification
Can't we put this to resolved already? Andreas Müller
06:08 PM bug #7689: Mutliple representation exception when creating taxon nodes
We should try to fix this soon if it is reproducable Andreas Müller
03:46 PM bug #7689 (Worksforme): Mutliple representation exception when creating taxon nodes
Steps to reproduce:
1. Create a root taxon via right-click on classification
2. Directly create a second one on t...
Patrick Plitzner
05:25 PM bug #7555 (Closed): TaxonServiceImpl.findTaxaAndNames() broken for cichoriae searching for "Lapsa...
Andreas Müller wrote:
> The issue described in the description (as link) seems to be solved.
>
> The 2 later link...
Andreas Kohlbecker
05:11 PM bug #7555: TaxonServiceImpl.findTaxaAndNames() broken for cichoriae searching for "Lapsana communis"
Andreas Müller wrote:
> Maybe it is related that for Nepenthes alata no specimen appear: http://caryophyllales.org/n...
Andreas Kohlbecker
05:08 PM bug #7692 (Worksforme): Empty "Specimens" section
In some cases the tabless taxon page shows an empty "Specimens" section.
Example: http://caryophyllales.org/nepent...
Andreas Kohlbecker
05:07 PM bug #7691 (Closed): Empty "Bibliography" section
In some cases the tabless taxon page shows an empty "Bibliography" section.
Example: http://caryophyllales.org/nep...
Andreas Kohlbecker
04:11 PM bug #7690 (New): adapt available typedesignation editors to name rank
The RegistrationWorkingsetEditor offers a selection dialog for NameTypeDesignationEditor and SpecimenTypeDesignationE... Andreas Kohlbecker
02:17 PM feature request #7688 (New): Agent (person/team/instituion) page
To make agents (persons, teams, institutions) linkable and give an overview on all data available on an agent we need... Andreas Müller
02:03 PM bug #7687 (Closed): NPE in TypeDesignationSetManager
Fix looks ok! Andreas Kohlbecker
01:57 PM bug #7687: NPE in TypeDesignationSetManager
Hallo,

habe ich vorläufig gefixt: commit:73e4daa. Wird heute Nacht eingespielt.

Andreas K., schaust du nochma...
Andreas Kohlbecker
01:55 PM bug #7687 (Closed): NPE in TypeDesignationSetManager


Arbeit mit Vaadin http://test.e-taxonomy.eu/cdmserver/phycobank_production/app/registration#!workingset/8295ec6c...
Andreas Kohlbecker
01:49 PM feature request #7217: SpecimenTypedesignationsWorkingsetEditor: Longitute Latitude fields allo...
Andreas Kohlbecker wrote:
>...
> Maybe the http://docs.geotools.org/ provide a suitable parser? Also a possibility,...
Andreas Müller
01:36 PM report #7089: Rights and Roles Workshop 2017-11
I think it is better to close this ticket and open a new "Open issues for Rights and Roles" ticket. Andreas Müller
01:31 PM report #7089 (In Progress): Rights and Roles Workshop 2017-11
It is linked from [[WorkshopRightsAndRoles2017-11]], therefore I think we could close it without losing anything, BUT... Andreas Kohlbecker
12:33 PM report #7089: Rights and Roles Workshop 2017-11
Do we want to keep this ticket open? Andreas Müller
01:31 PM bug #7686 (Feedback): Specimen title cache issues in data portal specimen table
![](picture727-1.png)
Walter:
* Der Name nach Holotype of wird doppelt ausgegeben.
* Vor dem Link zum Herbarb...
Patrick Plitzner
01:28 PM feature request #7685 (New): Add Selenium tests for specimen table in data portal
* add test data to 160.45.63.201/cdm_integration_reference
* create new dump which needs to be stored in edit-integr...
Patrick Plitzner
01:22 PM bug #7528 (In Progress): Allow changing the Registration status in the RegistrationWorkingsetEditor
This issue should not be closed as duplicate as it contains the references to the code changes.
I will rather clo...
Andreas Kohlbecker
01:20 PM feature request #7618 (Duplicate): PhycoBank Curator rights
closing this issue as duplicate of #7528 the discussion on the status `rejected` has moved to #7684 Andreas Kohlbecker
01:01 PM bug #7676 (Feedback): Suchfunktionalität in Registration UI Dateneingabe
In der Ticketbeschreibung sind verschiedene Probleme beschrieben.
1. Suche nach der Registrierung (100267) für den...
Andreas Kohlbecker
12:37 PM bug #6247 (Rejected): Check if concept relationships are correctly implemented in Gefäßpflanzenim...
As the redlists are not using the platform anymore we do not need the import anymore. Andreas Müller
12:09 PM bug #7683 (In Progress): external links Audit table should allow uuid to be null
Andreas Müller
12:09 PM bug #7683: external links Audit table should allow uuid to be null
This is generally the case already when databases are created via hibernate CREATE (see e.g. edit-test.cdm_test_eurom... Andreas Müller
11:32 AM bug #7683 (Closed): external links Audit table should allow uuid to be null
when deleting an external link an com.mysql.jdbc.exceptions.jdbc4.MySQLIntegrityConstraintViolationException: Column ... Katja Luther
11:49 AM bug #7682 (In Progress): Point.precision must not be 0 by default
Already removed default value in class, still need update script to remove all 0 values from existing data Andreas Müller
09:48 AM bug #7682 (Closed): Point.precision must not be 0 by default
It seems as if there is a problem with the embedded type Point. Whenever long and lat are set the radius is always se... Andreas Kohlbecker
11:32 AM feature request #7415: Implement ExternalLinks for OriginalSources in TaxEditor
the fields are available now, but the AUD table definition needs to be updated, the uuid should be allowed to be null... Katja Luther

08/24/2018

12:39 PM bug #7681 (Resolved): Update date field when editing parse field in TimePeriodElement
Applied in changeset commit:taxeditor|9be67535c6cfd81916477c02af59ea94dcf4487b. Patrick Plitzner
12:38 PM bug #7681 (Closed): Update date field when editing parse field in TimePeriodElement
The date fields are only updated when a correct date could be parsed.
This could be misleading if i.e. you clear t...
Patrick Plitzner
10:28 AM bug #7679: NPE when creating root child in classification
I created a new ticket for the redesign -> #7680 Patrick Plitzner
10:26 AM bug #7679: NPE when creating root child in classification
While investigating this issue I realized that the *NewTaxonNodeWizard* does not work like all the other "new" wizard... Patrick Plitzner
08:36 AM bug #7679: NPE when creating root child in classification
When entering data in "Detail" an exception is thrown with every key stroke
~~~
login : admin
editor version : 5...
Patrick Plitzner
10:27 AM feature request #7680 (Closed): Refactor TaxonNodeDetailElement
Copied from #7679:
While investigating this issue I realized that the *NewTaxonNodeWizard* does not work like all ...
Patrick Plitzner

08/23/2018

05:28 PM bug #7679 (In Progress): NPE when creating root child in classification
Andreas Müller
05:28 PM bug #7679 (Closed): NPE when creating root child in classification
When calling "new" on classification, the dialog does not show the "publish" checkbox for some reason. Also the unpla... Andreas Müller
04:09 PM bug #7677: Nomenclatural Status is always set to nom illeg in details view
~~~ sql
select distinct name.id nameId, name.fullTitleCache fullTitle, defNow.titleCache currentStatus, a.date, ns.r...
Andreas Müller
11:39 AM bug #7677: Nomenclatural Status is always set to nom illeg in details view
This is the statement to get all nomenclatural status changes for update and create and which are changed to nom. ill... Katja Luther
10:10 AM bug #7677 (Resolved): Nomenclatural Status is always set to nom illeg in details view
Katja Luther
10:09 AM bug #7677 (Closed): Nomenclatural Status is always set to nom illeg in details view
Hallo,
es scheint so, dass die default-Einstellung für Nomenclatural Status als "nom. illeg." einen gefährlichen N...
Katja Luther
11:26 AM feature request #7678 (New): Show exception message if editor update fails
For example IOException when the hard drive is full
~~~
java.io.IOException: Es steht nicht genug Speicherplatz a...
Patrick Plitzner

08/22/2018

04:31 PM bug #7672: use taxonRelationship formatter for label in referencing objects view
Maybe we should first consider moving formatting to server side as it is faster and as we may also make formatting de... Andreas Müller
02:31 PM bug #7672 (New): use taxonRelationship formatter for label in referencing objects view
Die Formatierer der Konzeptrelationen im RefObjects View scheinen die Relationen noch falsch herum zu beschreiben. Au... Katja Luther
03:41 PM bug #7676: Suchfunktionalität in Registration UI Dateneingabe
Das Phänomen ist schlecht reproduzierbar.
Bevor ich das Ticket geschrieben habe, hatte ich mich als admin aus und wi...
Wolf-Henning Kusber
03:24 PM bug #7676 (Closed): Suchfunktionalität in Registration UI Dateneingabe
Referenz lt. Datenbankausgabe:
Moestrup, Ø. & Calado, A.J., Dinophyceae.Süßwasserflora von Mitteleuropa, 6: [I]-IX, ...
Wolf-Henning Kusber
02:50 PM feature request #7675 (New): Make columns with default values togglable
Columns that have default values defined in a taxon description should have a function to toggle their visibility Patrick Plitzner
02:47 PM feature request #7674 (Closed): Show taxon descriptions in character matrix editor
There are two types of taxon descriptions:
1. description from literature
1. description for default values
Th...
Patrick Plitzner
02:32 PM task #7673 (New): review ABCD import
please review the ABCD import for alga terra new Katja Luther
02:22 PM bug #3535: Automatically update descriptive view if content changed
please review
Katja Luther
02:22 PM bug #3535 (Resolved): Automatically update descriptive view if content changed
Applied in changeset commit:taxeditor|c799a32e590620a2719f8f4edfa30604d5a23306. Katja Luther
01:13 PM bug #7484 (Resolved): Protected titleCache handling not correct in Reference detail view
Applied in changeset commit:taxeditor|0656435dc061bddf14ebdbdad6b3868f6e0f2eb3. Katja Luther
12:35 PM bug #7665: ConcurrentModificationException when closing Editor
Patrick Plitzner wrote:
> Applied in changeset commit:taxeditor|c7b20ed3c866508182a3d5d1b44b57fc1244b6f8.
Not sur...
Andreas Müller
12:25 PM bug #7665 (Resolved): ConcurrentModificationException when closing Editor
Applied in changeset commit:taxeditor|c7b20ed3c866508182a3d5d1b44b57fc1244b6f8. Patrick Plitzner
12:24 PM bug #7665: ConcurrentModificationException when closing Editor
I could never reproduce this problem, so for reviewing we could just wait test for a while and see if it happens again. Patrick Plitzner
11:30 AM bug #7665 (In Progress): ConcurrentModificationException when closing Editor
use iterator.remove() Andreas Müller
12:21 PM bug #7352 (Closed): review propertyPaths in editor
Andreas Müller
12:07 PM feature request #6565 (Closed): [MASTER] Eclipse 4 Migration
Andreas Müller
12:05 PM feature request #6932 (Closed): Migrate bulk editor
Close this ticket as bulk editor has new developments like NAT tables and parallel loading anyways. Andreas Müller
12:01 PM bug #4465 (Worksforme): Handle Drag and Drop for Synonyms
this issue is fixed, follow up ticket with remaining problems is #7671 Katja Luther
11:59 AM bug #7064 (Closed): NameEditor remaining issues
Andreas Müller
11:56 AM bug #7064: NameEditor remaining issues
Created new tickets for open issues Andreas Müller
11:57 AM bug #7671 (New): Drag & Drop for synonyms has refresh problems
when drag & drop synonym from an existing homotypic group or into an existing homotypic group the refresh of the name... Katja Luther
11:49 AM feature request #7670 (New): [DISCUSS] Do we need right click "save" menu
... or is icon + Str/S enough.
Ask users.
It was like this in Name Editor before e4. Either we should have it e...
Andreas Müller
11:34 AM feature request #7015 (New): Migrate recent menu item
The recent menu should preferably show only recent items from the currently connected database Andreas Müller
09:36 AM bug #7576 (Resolved): Set Publish Flag for Subtree Dialog - Problems with Progressmonitor
The problem of lost connection between server and progress monitor dialog is fixed, the percentage display is fixed t... Katja Luther
08:42 AM feature request #7657 (Rejected): Use HQL query for loading character matrix
issue should be handled in #7589 Patrick Plitzner
08:41 AM feature request #7589: Performance, UX and stability patches for CharacterMatrix
commit:cdmlib|d9c066f5584fd689621509488a82c6649abb84d4 Patrick Plitzner

08/21/2018

03:41 PM bug #6850 (Feedback): NPE when clearing label of "kind of" term in TermEditor
@Andreas: I could not reproduce this behavior. Maybe this was fixed a while ago. Can you please test and close this t... Patrick Plitzner
03:29 PM bug #6742 (Feedback): IAE when using "Link with taxon selection" in Specimen-Editor
@Andreas: I could not reproduce this behavior. Maybe this was fixed a while ago. Can you please test and close this t... Patrick Plitzner
03:14 PM feature request #6475 (Resolved): Make specimen tree editor collapsable and expandable
Patrick Plitzner
01:50 PM feature request #5021 (Rejected): TreeNodeDropAdapterAssistant should use RemotingMoveTaxonNodeHa...
I think this is obsolete because the functionality is now in the service method which is used by both classes. Katja Luther
12:46 PM bug #4573 (Resolved): Handle duplicate username, group or grantedAuthority correctly
please review Katja Luther
12:33 PM bug #4573: Handle duplicate username, group or grantedAuthority correctly
now for users and groups there is a check for identical names and a message that the user/group already exists, pops up. Katja Luther
11:25 AM bug #7638: problem with media data missing meta data

The media file above does not exist, clicking on the link results in:
Sorry, no connection ...
Sorry, no conn...
Katja Luther
09:46 AM bug #7145: NPE when trying to move a synonym into another homotypic group
this exception appeared again for Sabine:
Hallo,
bei Sabulina afghanica kann ich das Synonym nicht von hetero- ...
Katja Luther
09:44 AM bug #7668 (Closed): NPE when changing author
mail of Sabine:
Hallo,
beim Versuch bei der Art Arenaria brachypetala den Autor zu ändern (Auswahl eines andere...
Katja Luther
08:05 AM bug #7606: kompact display of CDM Point data
Maybe we can leave it as an expandable element which is by default not expanded.
This allows to also show the deci...
Andreas Müller

08/20/2018

06:06 PM feature request #7666: Remaining issues for "Formatter and DTO for taxon relationships (e.g. misa...
WGB: Der Buchlink verweist auf den Protolog von N. blancoi Blume – der hat ja aber gerade nichts mit dieser Namensanw... Andreas Müller
11:59 AM feature request #7666 (In Progress): Remaining issues for "Formatter and DTO for taxon relationsh...
copied from #6682
for requirements see #6682
* correct symbols for relationships in databases
* EN_DASH...
Andreas Müller
05:40 PM feature request #6682: Formatter and DTO for taxon relationships (e.g. misapplied names)
AM: … und noch etwas: bei der „sensu“ Referenz ist ja vermutlich die Jahreszahl bewusst weggelassen um es an die gäng... Andreas Müller
05:30 PM feature request #6682: Formatter and DTO for taxon relationships (e.g. misapplied names)
Sensu references and relation references should be formatted similarly:
WGB: Wenn die exakte Referenz über die Bib...
Andreas Müller
12:00 PM feature request #6682 (Closed): Formatter and DTO for taxon relationships (e.g. misapplied names)
close this ticket as released in 5.2, open issues moved to #7666 Andreas Müller
02:20 PM bug #7528 (Duplicate): Allow changing the Registration status in the RegistrationWorkingsetEditor
Wolf-Henning Kusber
02:18 PM feature request #7572 (Closed): SpecimenTypeDesignationEditor: Collection combobox shows collecti...
Review: institutions as well as codes can be searched. Seem to work. Wolf-Henning Kusber
01:57 PM feature request #7611 (Closed): media types with media uris are clickable
Es funktioniert (ist allerdings nicht besonders auffällig).
Beispiel in der Ausgabe http://test.e-taxonomy.eu/datapo...
Wolf-Henning Kusber
01:43 PM feature request #7569 (Closed): SpecimenTypeDesignationEditor: Typedesignations should be ordered
Main usecases checked:
Holotype isotypes
Holotype paratypes
Type Epitype, Type lectotype
Order as requested, ti...
Wolf-Henning Kusber
01:39 PM bug #7667: NoHttpResponseException for large queries in bulk editor
we should handle this with high priority as it may influence server performance Andreas Müller
01:32 PM bug #7667 (Feedback): NoHttpResponseException for large queries in bulk editor
Copied from #6321:
AM: "when testing a couple of times I got an EagerLoadingException caused by an NoHttpResponseE...
Patrick Plitzner
01:35 PM bug #7557 (Closed): TaxonNamePopEditor: com.vaadin.data.Property$ReadOnlyException on saving a su...
Wolf-Henning Kusber
01:33 PM bug #7629 (Closed): creating a typification only registration should not be possible if the names...
Tested and works. Wolf-Henning Kusber
01:32 PM feature request #6321 (Closed): Implement parallel loading + progress bar for loading objects int...
Andreas Müller wrote:
> Generally I wonder how to continue here. As mentioned I still get HTTPNoResponse issues on "...
Patrick Plitzner
01:28 PM bug #7555: TaxonServiceImpl.findTaxaAndNames() broken for cichoriae searching for "Lapsana communis"
Maybe it is related that for Nepenthes alata no specimen appear: http://caryophyllales.org/nepenthaceae/cdm_dataporta... Andreas Müller
12:38 PM bug #7555 (Feedback): TaxonServiceImpl.findTaxaAndNames() broken for cichoriae searching for "Lap...
The issue described in the description (as link) seems to be solved.
The 2 later links do return "Required UUID pa...
Andreas Müller
01:27 PM feature request #7594: RegistrationWorkingsetEditor click on new serveral times
Issue not resolved. May be a problem of the slow test server. Wolf-Henning Kusber
01:19 PM feature request #7643: cdmlight export: for bibliographic short citation use the freetext of the ...
As mentioned in #note-2 this implementation is critical. I left a note in #7644 to maybe revert once #7644 is impleme... Andreas Müller
01:03 PM feature request #7643 (Closed): cdmlight export: for bibliographic short citation use the freetex...
Katja Luther
01:11 PM bug #7566 (Closed): TeamOrPersonField: some Persons can not be selected
Wolf-Henning Kusber
12:34 PM bug #7647 (Closed): accepted taxa also used as MAN or Pro Parte Synonym are displayed as MAN in d...
The example was Nepenthes hispida and it is displayed correctly as accepted name now. Katja Luther
12:29 PM bug #7647 (Feedback): accepted taxa also used as MAN or Pro Parte Synonym are displayed as MAN in...
Katja, can you check with Walters example again in production. Unfortunately it is not mentioned in the ticket. If it... Andreas Müller
10:34 AM feature request #7071 (New): Reenable restore functionality
Patrick Plitzner
10:11 AM bug #7665 (Resolved): ConcurrentModificationException when closing Editor
When closing editor a ConcurrentModificationException occurs:
~~~ text
login : w.berendsohn
editor version : 5.2...
Katja Luther

08/17/2018

10:01 PM bug #7578: preseve null values in all mesurements during serialization of webservice responses
Andreas Müller wrote:
> error radius still returns 0 in http://test.e-taxonomy.eu/cdmserver/cichorieae/occurrence/8e...
Andreas Kohlbecker
03:14 PM bug #7578: preseve null values in all mesurements during serialization of webservice responses
error radius still returns 0 in http://test.e-taxonomy.eu/cdmserver/cichorieae/occurrence/8eaf2ade-d478-4af6-b3df-bad... Andreas Müller
02:09 PM bug #7578 (Closed): preseve null values in all mesurements during serialization of webservice res...
works now! Andreas Kohlbecker
12:50 PM bug #7578 (In Progress): preseve null values in all mesurements during serialization of webservic...
this seems to be not working as expected:
http://test.e-taxonomy.eu/cdmserver/cichorieae/occurrence/8eaf2ade-d478-...
Andreas Kohlbecker
09:36 PM bug #7179: Phycobank: set protectedTitleCaches = 1 where Person contains no data
correct! Andreas Kohlbecker
04:24 PM bug #7179: Phycobank: set protectedTitleCaches = 1 where Person contains no data
I guess this is only data related and therefore target version can be removed. Correct? Andreas Müller
04:41 PM feature request #7071: Reenable restore functionality
?? Andreas Müller
04:23 PM feature request #7281: Implement bromelian import
I guess this is only data related and therefore target version can be removed? Otherwise please add commit and revert... Andreas Müller
04:09 PM feature request #6682 (Resolved): Formatter and DTO for taxon relationships (e.g. misapplied names)
Andreas Müller
04:06 PM task #6986 (Rejected): 4 animalia lists available for RL
Rejected as lists are not needed anymore. Andreas Müller
03:51 PM task #7596 (Resolved): PhycoBank Portal - Formatting
Andreas Kohlbecker
03:33 PM task #7527 (Closed): CdmEntityDaoBase.*ByParam() public and also available in the service layer
Generally this looks ok. Only the return types should be specified explicitly. I created a new ticket as this is a ge... Andreas Müller
03:23 PM feature request #7664 (New): Use typified return types where possible
1. Many method of service layer and persistence use T as return type even if a more specific class is defined by para... Andreas Müller
01:03 PM bug #7663 (New): drupal installations report Undefined index: distribution_name in drupal_install...
This is a known drupal issue https://www.drupal.org/project/drupal/issues/1971068
See also:
https://api.drup...
Andreas Kohlbecker
12:30 PM bug #7361 (Closed): Consistent UI concept for create, new, add, remove, delete, edit buttons
remaining improvements copied to #7662 Andreas Kohlbecker
12:28 PM feature request #7662 (New): Better icons for create, new, add row, remove row

Alternative icons for create, new, add row, remove row:
* use add row and remove icons like: ![](picture79-1.png...
Andreas Kohlbecker
12:20 PM bug #7583 (Closed): NPE on logout in registration list view
it's fixed Andreas Kohlbecker
12:17 PM feature request #7590 (Closed): findByTitleWithRestrictions allows combining Restrictions by OR
this feature obviously works as expected on the test-server since it is being used in cdm-vaadin and it is covered by... Andreas Kohlbecker
12:16 PM task #7550 (Closed): Move UserHelper from cdm-vaadin into cdmlib
no further problems Andreas Kohlbecker
12:15 PM bug #7525 (Closed): IdentifiableServiceBase findByTitle(), and listByTitle() methods support cdm...
all criteria methods restored commit:024d9b21 and no further problems did popup during the past two months, so we can... Andreas Kohlbecker
12:12 PM bug #7586 (Closed): com.vaadin.data.Property$ReadOnlyException on opening TypeSpecimenWorkingsetE...
did not occur again on the test-server since over 20days, so this is for sure solved Andreas Kohlbecker
12:11 PM feature request #7571 (Closed): Collection editor has field to select and edit the institution
Andreas Kohlbecker
12:10 PM task #7562 (Closed): Specimen table "Associated with" taxon is irritating and needs to be removed...
Checked and ok Andreas Kohlbecker
09:40 AM task #7562: Specimen table "Associated with" taxon is irritating and needs to be removed, replaced
For reviewing check http://test.e-taxonomy.eu/dataportal/preview/campanulaceae/cdm_dataportal/taxon/cdcacbda-11c0-4c... Andreas Kohlbecker
09:40 AM task #7562: Specimen table "Associated with" taxon is irritating and needs to be removed, replaced
Hallo Norbert,
die Specimenseiten sind von dieser Änderung nicht betroffen: http://test.e-taxonomy.eu/dataportal/p...
Andreas Kohlbecker
08:48 AM task #7562: Specimen table "Associated with" taxon is irritating and needs to be removed, replaced
Hallo Andreas,

ich komm erst heute dazu, zu antworten.

Ich kann mich ehrlich gesagt nicht mehr daran erinnern...
Andreas Kohlbecker
11:33 AM feature request #6321: Implement parallel loading + progress bar for loading objects into the bul...
Generally I wonder how to continue here. As mentioned I still get HTTPNoResponse issues on "test" when running large ... Andreas Müller
11:25 AM feature request #6321: Implement parallel loading + progress bar for loading objects into the bul...
Patrick Plitzner wrote:
> Comment #6321#note-43: This is fixed
OK, this looks quite good. I think we can only i...
Andreas Müller
11:18 AM feature request #6321: Implement parallel loading + progress bar for loading objects into the bul...
Patrick Plitzner wrote:
> Comment #6321#note-40: I just added a delay of 500ms to wait for the previous job to finis...
Andreas Müller
11:15 AM feature request #6321 (Feedback): Implement parallel loading + progress bar for loading objects i...
I still get exceptions related to NoHttpResponseException on test server. E.g. when running a first request for "*" o... Andreas Müller
11:08 AM feature request #7661 (New): Improve saving strategy for bulk editor
Currently all records are reloaded. This creates problems especially with large lists.
We need a save strategy whi...
Andreas Müller
11:00 AM feature request #7643: cdmlight export: for bibliographic short citation use the freetext of the ...
yes this is fixed. Katja Luther
10:53 AM feature request #7643: cdmlight export: for bibliographic short citation use the freetext of the ...
Andreas Müller wrote:
> This will throw an NPE if datePublished does not exist!!
Is this fixed??
Andreas Müller
10:52 AM feature request #7518 (Closed): remaining issues for usage of NatTable for bulkeditor
All issues are either fixed or moved to new ticket so we can close this one. Andreas Müller
10:51 AM feature request #7518: remaining issues for usage of NatTable for bulkeditor
Patrick Plitzner wrote:
> **better symbols for target/candidates of deduplication**: this could either be solved b...
Andreas Müller
10:39 AM feature request #7518: remaining issues for usage of NatTable for bulkeditor
Patrick Plitzner wrote:
>
> **However, the percentage does not yet depend on real content length**: I tried auto a...
Andreas Müller
10:21 AM feature request #7518: remaining issues for usage of NatTable for bulkeditor
Patrick Plitzner wrote:
> **possibility to copy from a cell content**: On linux the context menu does not exist at a...
Andreas Müller
10:19 AM feature request #7518: remaining issues for usage of NatTable for bulkeditor
Patrick Plitzner wrote:
> **colors look like in the 90th**: I used a little less neon colors but this is very subj...
Andreas Müller
10:10 AM feature request #7518: remaining issues for usage of NatTable for bulkeditor
Patrick Plitzner wrote:
> **once we have >3 columns we will need horizontal scrolling anyway**: horizontal scrolli...
Andreas Müller
10:06 AM feature request #7518: remaining issues for usage of NatTable for bulkeditor
Patrick Plitzner wrote:
> **size of the rows should not be 50/50, but depending on the content length (percentage ...
Andreas Müller
10:46 AM feature request #7660 (Closed): Indicate the row state in a NAT table via symbols
This is needed for e.g. indicating that a row is a candidate for deduplication. For further discussion see #7518.
...
Andreas Müller
10:37 AM feature request #7659 (New): Implement algorithm to optimize initial column size in NAT tables
If a NAT table has multiple columns the correct initial column size becomes important to avoid too much empty space a... Andreas Müller
10:00 AM bug #7559 (Closed): possibly corrupted hiberante session after previous error on saving editor
Done with commit:cdm-vaadin|51886e05
Closing ticket.
Andreas Kohlbecker
09:51 AM bug #7559: possibly corrupted hiberante session after previous error on saving editor
These problems did not occur since 30 days despite intensive usage of the test system, therefore we can be pretty sur... Andreas Kohlbecker
09:44 AM bug #6563 (Closed): Display altitude, distance to Ground and watersurface correct handling of fr...
Works for the examples given in this issue. Andreas Kohlbecker
09:27 AM bug #7531 (Closed): PermissionDeniedException on flushing registration with modified status even ...
Very beautiful code ;-), I think we can close this ticket. Andreas Müller

08/16/2018

04:33 PM bug #7638 (Feedback): problem with media data missing meta data
Size is empty now, but heigth and width is still 0. Is this wanted or did you forget to handle them similarly? Andreas Müller
04:29 PM bug #7647: accepted taxa also used as MAN or Pro Parte Synonym are displayed as MAN in details view
A first check looks fine, but I would like to check again with Walters example after release before finally closing t... Andreas Müller
02:35 PM feature request #7658 (Closed): use new taxon relationship DTO webservice in portal
for details see #6682
Example taxa:
* Chichorieae: Pilosella acutifolia coll.
* Cihochorieae: Hieracium dermop...
Andreas Kohlbecker
02:33 PM bug #7243 (Duplicate): sometimes the context menu in name editor does not work anymore
Patrick Plitzner
12:07 PM feature request #7657 (Rejected): Use HQL query for loading character matrix
Patrick Plitzner
10:14 AM bug #7641: Reference editor: Error when incerting several new authors into a new author team
![](picture645-1.png)

![](picture58-1.png)
![](picture395-1.png)
Wolf-Henning Kusber

08/15/2018

08:12 PM bug #7656 (Duplicate): Adapt inverse symbol for MisappliedName relationship type
this is required for #6682
still need update script here
Andreas Müller
03:38 PM feature request #7518 (Resolved): remaining issues for usage of NatTable for bulkeditor
Patrick Plitzner
03:31 PM feature request #7518: remaining issues for usage of NatTable for bulkeditor
~~**possibility to copy from a cell content**: On linux the context menu does not exist at all but CTRL+C works. I th... Patrick Plitzner
12:23 PM feature request #6321 (Resolved): Implement parallel loading + progress bar for loading objects i...
Patrick Plitzner
09:54 AM feature request #6321: Implement parallel loading + progress bar for loading objects into the bul...
Comment #6321#note-40: I just added a delay of 500ms to wait for the previous job to finish. Waiting explicitily is v... Patrick Plitzner
12:16 PM bug #7641: Reference editor: Error when incerting several new authors into a new author team
All new authors, except the last one are not saved = they can not be selected. Wolf-Henning Kusber
12:06 PM bug #7641: Reference editor: Error when incerting several new authors into a new author team
http://test.e-taxonomy.eu/cdmserver/phycobank_production/app/registration#!workingset/1c70fa46-c7a5-43e7-922a-379b200... Wolf-Henning Kusber
11:44 AM bug #7641: Reference editor: Error when incerting several new authors into a new author team
2018-08-15
Documentation http://test.e-taxonomy.eu/cdmserver/phycobank_production/app/registration#!workingset/8be1a...
Wolf-Henning Kusber
09:13 AM feature request #7653: [DISCUSS] Delete NameFacts => Result: no
WGB:
richtig wichtig erscheint mir vor allem die Sache mit den Typen. Aber für alle Fälle gilt, dass man das vorlä...
Andreas Müller

08/14/2018

06:54 PM feature request #7655 (Duplicate): References Editor: book section offers title field
References Editor: A book section does not provide a title field, yet.
External users might miss this.
Workaround...
Wolf-Henning Kusber
06:51 PM feature request #7654 (Duplicate): New registration page existing publications combobox does 'beg...
The search on bibliographic authors is a full text search.
Example "Lange-Bert" (see screen shot) is searching for t...
Wolf-Henning Kusber
04:41 PM feature request #7648: Create taxonrelation to genus or species when subordinate names are created
Also after import of new higher classifications we need to attache subgeneric taxa to their according taxa in bulk.
...
Andreas Müller
04:38 PM feature request #7648: Create taxonrelation to genus or species when subordinate names are created
Andreas Kohlbecker wrote:
> When creating a species a new Taxon needs to be created for this species and the new tax...
Andreas Müller
04:26 PM feature request #7653: [DISCUSS] Delete NameFacts => Result: no
WGB:
ich sehe da eine Reihe von Anwendungen für Namens-bezogene Fakten:
* ~~Etymologie – ist ganz allgemein wie...
Andreas Müller
10:25 AM feature request #7653: [DISCUSS] Delete NameFacts => Result: no
AM:
upps, das ist mir vollständig neu, dass für Namen über den Bulkeditor auch (Name-)facts editiert werden können...
Andreas Müller
10:23 AM feature request #7653 (Closed): [DISCUSS] Delete NameFacts => Result: no
NameFacts are currently very rarely used except for protologues. Protologues will be handled with nomenclatural sourc... Andreas Müller
09:49 AM feature request #7281 (Closed): Implement bromelian import
Katja Luther
09:46 AM bug #7638 (Resolved): problem with media data missing meta data
Katja Luther
09:42 AM bug #7614 (Closed): IndexOutOfBoundsException after deleting in bulkeditor
works fine now and the code seems to be correct. Katja Luther
09:12 AM feature request #7652 (New): add possibility to delete only the taxon node and keep the taxon in ...
Katja Luther

08/13/2018

11:02 PM task #7651 (New): RegistrationManager implemented
The commit:6ed17427 which was made for #7622 contains business logic which was placed in the RegistrationService for ... Andreas Kohlbecker
10:57 PM task #7650 (New): RegistrationFactory implemented
The commit:6ed17427 which was made for #7622 contains factory methods (at least one) which were placed in the Registr... Andreas Kohlbecker
07:21 PM bug #7622: RegistrationWorkingsetEditor: navigating to other pages with fresh registrations leave...
Updating the subject to better reflect the cause Andreas Kohlbecker
05:21 PM feature request #6682: Formatter and DTO for taxon relationships (e.g. misapplied names)
This should rather be a formatter for concept relations and a new DTO service in remote. Andreas Müller
04:34 PM bug #7649 (Closed): Term editor loads/saves extremely slow
Walter:
"Der Term Editor braucht extrem lange, um aufzugehen – macht nichts, aber könnte ja sein, dass da etwas n...
Patrick Plitzner
04:31 PM feature request #6321: Implement parallel loading + progress bar for loading objects into the bul...
Patrick Plitzner wrote:
> Andreas Müller wrote:
> > when testing a couple of times I got an EagerLoadingException c...
Andreas Müller
04:20 PM feature request #6321: Implement parallel loading + progress bar for loading objects into the bul...
Andreas Müller wrote:
> when testing a couple of times I got an EagerLoadingException caused by an NoHttpResponseExc...
Patrick Plitzner
03:26 PM feature request #6321: Implement parallel loading + progress bar for loading objects into the bul...
Andreas Müller wrote:
> When running a search and stopping it by running a new search the results of the first searc...
Patrick Plitzner
04:30 PM bug #7614 (Resolved): IndexOutOfBoundsException after deleting in bulkeditor
Patrick Plitzner
04:29 PM bug #7614: IndexOutOfBoundsException after deleting in bulkeditor
There are cases when -1 is returned as the current row index. This is now caught before getting the element at the in... Patrick Plitzner
04:05 PM bug #7555: TaxonServiceImpl.findTaxaAndNames() broken for cichoriae searching for "Lapsana communis"
Also an issue for Nepenthes ampullaria
http://caryophyllales.org/nepenthaceae/cdm_api/proxy/http%253A%252F%252Fap...
Andreas Müller
01:33 PM bug #7555 (Resolved): TaxonServiceImpl.findTaxaAndNames() broken for cichoriae searching for "Lap...
please review Andreas Kohlbecker
01:32 PM bug #7555: TaxonServiceImpl.findTaxaAndNames() broken for cichoriae searching for "Lapsana communis"
fixed in commit:0d70754 Andreas Kohlbecker
01:29 PM bug #7555: TaxonServiceImpl.findTaxaAndNames() broken for cichoriae searching for "Lapsana communis"
also reported by walter
http://caryophyllales.org/nepenthaceae/cdm_api/proxy/http%253A%252F%252Fapi.cybertaxono...
Andreas Kohlbecker
03:20 PM feature request #7648 (Resolved): Create taxonrelation to genus or species when subordinate names...
When creating a species a new Taxon needs to be created for this species and the new taxon needs to be related to the... Andreas Kohlbecker
02:28 PM feature request #7506 (Duplicate): Allow direct editing bulk editor
Patrick Plitzner
02:27 PM feature request #7518: remaining issues for usage of NatTable for bulkeditor
Andreas Müller wrote:
> The following comment was missing when the ticket was copied from #7439: "Additionally offer...
Patrick Plitzner
01:17 PM feature request #4383: references in bibliography need de-duplication
Same or similar problem reported by Walter:
bei http://caryophyllales.org/nepenthaceae/cdm_dataportal/taxon/463255...
Andreas Kohlbecker
01:09 PM task #3249 (Duplicate): [DISCUSS] Free text search for specimen details
this seems like a duplicate of #3223
The requirement details given in this issue are very campanula secific and co...
Andreas Kohlbecker
01:04 PM bug #7645 (Closed): specimen admin preferences are not saved
works now Andreas Müller
09:53 AM bug #7645: specimen admin preferences are not saved
Applied in changeset commit:taxeditor|3935afdf45ef9ddc44850fab61cf53ba79125643. Katja Luther
09:45 AM bug #7645 (Resolved): specimen admin preferences are not saved
Andreas Müller
09:13 AM bug #7645 (Closed): specimen admin preferences are not saved
The specimen admin preferences are not in the database after clicking apply or OK. Katja Luther
01:03 PM bug #7647 (Resolved): accepted taxa also used as MAN or Pro Parte Synonym are displayed as MAN in...
Katja Luther
01:02 PM bug #7647 (Closed): accepted taxa also used as MAN or Pro Parte Synonym are displayed as MAN in d...
Katja Luther
12:47 PM bug #6289: “Back to images” link as “Back to taxon page” when in table-less mode
Fixing this should be easy and quickly. Andreas Kohlbecker
11:58 AM feature request #6677: Add "hort." flag to Botanical names
AM:
ok, das heißt, hort. könnte eigentlich an allen 4 Stellen stehen (Kombinations- und Ex-Author, sowie auch als ...
Andreas Müller
11:51 AM feature request #6677: Add "hort." flag to Botanical names
WGB:
im Stearn (4ed, 355) wird die Abkürzung „hort.“ als „hortorum, of gardens; hortulanorum, of gardeners“ defini...
Andreas Müller
10:43 AM feature request #6677: Add "hort." flag to Botanical names
AM:
Hallo Walter,
ich glaube im Zuge des Nepenthes Imports bin ich irgendwann mal auf die Abkürzung „hort.“ ges...
Andreas Müller
10:38 AM feature request #7646 (New): Implement parser and formatter for "hort."
as soon as #6677 is implemented Andreas Müller
09:51 AM feature request #7419 (Closed): Provide example NormalImplicit import file for phycobank higher t...
I think we can close this ticket. Andreas Müller
09:30 AM feature request #7419: Provide example NormalImplicit import file for phycobank higher taxon grap...
Why did you pass this issue to me? From reading the comments I got the impression that this issue is completed. I thi... Andreas Kohlbecker

08/10/2018

09:41 PM feature request #6321: Implement parallel loading + progress bar for loading objects into the bul...
Also got an NPE when deleting (and saving the delete) of a Reference. Maybe this is also related to parallel loading?... Andreas Müller
09:21 PM feature request #6321: Implement parallel loading + progress bar for loading objects into the bul...
Reloading after save and setting selection after save if selection is one of the later records in a huge dataset is s... Andreas Müller
09:17 PM feature request #6321: Implement parallel loading + progress bar for loading objects into the bul...
In name bulk editor changing e.g. specific epithet does NOT change the labels for "Name" and "Scientific name" and al... Andreas Müller
09:07 PM feature request #6321: Implement parallel loading + progress bar for loading objects into the bul...
when testing a couple of times I got an EagerLoadingException caused by an NoHttpResponseException. May the test serv... Andreas Müller
08:33 PM feature request #6321 (Feedback): Implement parallel loading + progress bar for loading objects i...
When running a search and stopping it by running a new search the results of the first search are still (partly) avai... Andreas Müller
08:18 PM feature request #7429 (Closed): Improve parsing and formatting for VerbatimTimePeriod
Andreas Müller
08:11 PM feature request #7506 (Feedback): Allow direct editing bulk editor
To me this seems to be a duplicate for #7503. Can you please double check and if you agree close ticket as duplicate ... Andreas Müller
08:01 PM feature request #7518: remaining issues for usage of NatTable for bulkeditor
The following comment was missing when the ticket was copied from #7439: "Additionally offering tooltips saying that ... Andreas Müller
07:56 PM feature request #7518: remaining issues for usage of NatTable for bulkeditor
By the way, once we have >3 columns we will need horizontal scrolling anyway. So maybe this can already be implemente... Andreas Müller
07:49 PM feature request #7518 (Feedback): remaining issues for usage of NatTable for bulkeditor
* possibility to copy from a cell content
* this works now except for the fact that in editing mode the right cli...
Andreas Müller
07:27 PM bug #7544 (Closed): Dragging a misapplication onto itself throws an exception in name editor
Disabling d&d seems to work. Advanced features copied to #7609 so we can close this ticket. Andreas Müller
07:15 PM bug #7603 (Closed): Changing a user group does not work as expected
As far as I understand the ticket this is fully fixed. Andreas Müller
02:27 PM task #7420: Import for higher taxon graph for phycobank
Andreas Müller wrote:
> What should be done with existing IAPT data. Should they be adapted to the new data model?
...
Andreas Müller
02:23 PM task #7420: Import for higher taxon graph for phycobank
What should be done with existing IAPT data. Should they be adapted to the new data model? Andreas Müller
02:07 PM task #7420 (In Progress): Import for higher taxon graph for phycobank
First version of import is ready and tested with Frey and WoRMS data running into empty local database.
Next step:...
Andreas Müller
02:03 PM feature request #7419 (Resolved): Provide example NormalImplicit import file for phycobank higher...
Wolf-Henning Kusber wrote:
> prefered: use a single excel sheet per classification
great, makes it easier
Andreas Müller

08/09/2018

01:09 PM feature request #7419: Provide example NormalImplicit import file for phycobank higher taxon grap...
prefered: use a single excel sheet per classification Wolf-Henning Kusber
01:02 PM feature request #7419 (Feedback): Provide example NormalImplicit import file for phycobank higher...
There seems to be an open issue: As we decided to create a classification for each reference and create a new taxon p... Andreas Müller
11:10 AM feature request #7419 (Resolved): Provide example NormalImplicit import file for phycobank higher...
As we have decided on the format and an example file exists as attachement to #7420 I think we can close this ticket. Andreas Müller
11:07 AM feature request #7643 (Feedback): cdmlight export: for bibliographic short citation use the freet...
Andreas Müller
11:07 AM feature request #7643: cdmlight export: for bibliographic short citation use the freetext of the ...
This will throw an NPE if datePublished does not exist!!
Also it is a bit dangerous as freetext in some cases may ...
Andreas Müller
10:20 AM feature request #7643 (Resolved): cdmlight export: for bibliographic short citation use the freet...
Katja Luther
10:19 AM feature request #7643 (Closed): cdmlight export: for bibliographic short citation use the freetex...
mail of WB:
noch ein Problemchen mit dem Output:
Nepenthes Datenbank – Da habe ich die folgende Referenz:
sieh...
Katja Luther
11:03 AM feature request #7644 (Closed): Add "continued" flag to (Verbatim)Timeperiod
... to indicate that a reference (usually a database) is continously edited and has no end date (yet).
E.g. Berend...
Andreas Müller
10:44 AM task #7420: Import for higher taxon graph for phycobank
Please save future versions of the excel file in the current .xslx format, .xls is outdated. Andreas Müller

08/08/2018

01:22 AM feature request #7640: Update ISO country names where necessary
This is not related to vaadin but a general cdm issue.
There are a couple of issues related to ISO 3166, many of t...
Andreas Müller
 

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