Activity
From 08/07/2018 to 09/05/2018
09/05/2018
- 11:41 PM feature request #3972: Strictly validate username to not null and not empty
- Still need to implement notEmpty, not null already exists. Also the TaxEditor does not allow to enter empty usernames...
- 11:24 PM bug #7677 (Closed): Nomenclatural Status is always set to nom illeg in details view
- It seems to work now as expected.
- 04:27 PM feature request #7717 (Feedback): Implement "continued" in TimePeriod UI
- 03:57 PM feature request #7717: Implement "continued" in TimePeriod UI
- Best would be to not show the "end" line at all if continued == true
- 03:55 PM feature request #7717: Implement "continued" in TimePeriod UI
- Also I would move the continued flag up, before "End" as it is something inbetween start and end. This may make the b...
- 03:50 PM feature request #7717: Implement "continued" in TimePeriod UI
- I don't know if this is related, but when entering data into the parse field now, the cursor always jumps to the begi...
- 12:59 PM feature request #7717 (Resolved): Implement "continued" in TimePeriod UI
- 12:59 PM feature request #7717 (New): Implement "continued" in TimePeriod UI
- the continued flag is implemented in editor now. at the moment the end date is removed when the continued flag is set...
- 12:56 PM feature request #7717 (Resolved): Implement "continued" in TimePeriod UI
- Applied in changeset commit:taxeditor|f36a68ee91d7e3c3c8365b13507c25af4da48b81.
- 03:56 PM feature request #7599: treeView for specimen data in dataportal
- Review Result:
1)
* method `create_cdm_specimen_or_observation()` needs either be named `render_cdm_specimen_o... - 03:42 PM feature request #7599 (Resolved): treeView for specimen data in dataportal
- starting review
- 03:43 PM bug #3535: Automatically update descriptive view if content changed
- By the way, moving facts also moves image galleries. For the user this might be unexpected as for the user it is not ...
- 03:39 PM bug #3535: Automatically update descriptive view if content changed
- Katja Luther wrote:
> this fix was only for the menu entry in taxonnavigator, but I will have a look at the problems... - 03:31 PM bug #3535: Automatically update descriptive view if content changed
- Upps, even more critical. Even selecting "Cancel" does not cancel the operation but still saves the target data and a...
- 03:18 PM bug #3535: Automatically update descriptive view if content changed
- this fix was only for the menu entry in taxonnavigator, but I will have a look at the problems in factual data view.
- 02:55 PM bug #3535: Automatically update descriptive view if content changed
- If the target taxon is dirty and unsaved and gives a warning. It says ".... all other unsaved changes will be saved"....
- 02:46 PM bug #3535: Automatically update descriptive view if content changed
- Andreas Müller wrote:
> Now, the fact is not removed from the old taxon. Only closing and reopening the taxon remove... - 02:43 PM bug #3535: Automatically update descriptive view if content changed
- Note: ~~~when moving full description to another taxon the new label of the description is: "Elements moved from ..."...
- 02:41 PM bug #3535: Automatically update descriptive view if content changed
- Moving the full description seems to work correctly.
- 02:36 PM bug #3535 (Feedback): Automatically update descriptive view if content changed
- ~~~Now, the fact is not removed from the old taxon. Only closing and reopening the taxon removes it.
I tested this f... - 02:32 PM bug #3535: Automatically update descriptive view if content changed
- Note: ~~the selection dialog for the target taxon does show the "start" taxon too. This is not needed and should be f...
- 03:42 PM bug #7722 (Closed): NamePopupEditor: validation not working for rank genus
- perfect !
- 02:47 PM bug #7722: NamePopupEditor: validation not working for rank genus
- solved, please review
- 02:46 PM bug #7722 (Resolved): NamePopupEditor: validation not working for rank genus
- Applied in changeset commit:cdm-vaadin|e8e0ad3ba36e287dc5fc1c398bc505f3f0a5a38e.
- 02:04 PM bug #7722: NamePopupEditor: validation not working for rank genus
- It could be that people validate higher rank names, too.
- 03:05 PM feature request #7700: use TypeDesignationSetManager for creating typedesignation string in cdmlightExport
- the mail from WB:
Hallo,
habe mir das angesehen. Es gibt ja praktisch 3 Fälle.
1. Gesamte information ist im ... - 03:03 PM feature request #7700 (Resolved): use TypeDesignationSetManager for creating typedesignation string in cdmlightExport
- 03:03 PM Revision 12266827 (cdmlib): ref #7700: fide and parenthesis are separated separators in taggedText
- 03:01 PM Revision d847eb88 (cdmlib): ref #7700: use TypedesignationSetManager for creating TypeDesignationString for homotypic group in cdm light export
- 02:53 PM Revision 0405e234 (cdmlib): ref #7700: use TypedesignationSetManager for creating TypeDesignationString for homotypic group in cdm light export
- 02:46 PM Revision e8e0ad3b (cdm-vaadin): fix #7722 removing rank limitation for validations in name editor
- 02:27 PM bug #6742: IAE when using "Link with taxon selection" in Specimen-Editor
- I did not get the IAE anymore but also could not create any result. I tried to
* Select or not select a taxon in ... - 01:59 PM bug #4573 (Closed): Handle duplicate username, group or grantedAuthority correctly
- Works fine
- 01:49 PM feature request #7712 (Closed): PhycoBank UI Reference detail size
- perfect!
- 01:48 PM feature request #7624 (Closed): Note field for Reference in Vaadin
- Perfect!
- 11:11 AM feature request #7624: Note field for Reference in Vaadin
- please review
- 01:45 PM bug #7724 (New): PatternSyntaxException in GrantedAuthority search dialog
- See stacktrace. I looked at the code and wondered why first ALL GAs are loaded and then compared via regex. Is this s...
- 01:41 PM Revision 0c40f20e (taxeditor): cleanup
- 01:22 PM feature request #6475 (Closed): Make specimen tree editor collapsable and expandable
- Seems to work (though it took me some time to find the buttons. But it is general RCP way of putting them so it shoul...
- 12:56 PM Revision f36a68ee (taxeditor): fix #7717: add continued flag to timeperiod ui
- 12:48 PM bug #6850: NPE when clearing label of "kind of" term in TermEditor
- Generally this seems to work now. I also could not reproduce.
Only related issue: with empty label the label refre... - 12:37 PM bug #7371 (Closed): Deleting Polytomous Key throws NPE
- Works fine with nightly.
- 12:22 PM bug #7371 (Resolved): Deleting Polytomous Key throws NPE
- ... upps sorry, looks like I tested with production on test server , will test again
- 12:21 PM bug #7371 (Feedback): Deleting Polytomous Key throws NPE
- I still get
~~~
login : admin
editor version : 5.2.1
server : test.e-taxonomy.eu (edit-test) / rem_conf_am
... - 12:35 PM feature request #7644: Add "continued" flag to (Verbatim)Timeperiod
- Katja Luther wrote:
> if the continued flag is set and then setContinued(false) is called, this.end should be set to... - 12:24 PM feature request #7644: Add "continued" flag to (Verbatim)Timeperiod
- if the continued flag is set and then setContinued(false) is called, this.end should be set to null
- 09:22 AM feature request #7644: Add "continued" flag to (Verbatim)Timeperiod
- Can you please review? (Katja can you maybe also shortly review?)
- 12:03 PM bug #7622 (Closed): RegistrationWorkingsetEditor: navigating to other pages with fresh registrations leaves empty registrations in the system
- no empty registrations since this has been fixed.
- 12:02 PM bug #7622: RegistrationWorkingsetEditor: navigating to other pages with fresh registrations leaves empty registrations in the system
- this was originally a dataportal ticket which has erroneously be overwritten with other information. There is a new t...
- 12:01 PM bug #7667: NoHttpResponseException for large queries in bulk editor
- Difficult to test. Currently the test server does not respond very often. So it can't be decided if this is related.
... - 11:54 AM feature request #7715 (Resolved): Description sources should be handled same as DescriptionElement
- Applied in changeset commit:taxeditor|d2c62a2b15901df2b03ad04d2f384f523d781492.
- 09:20 AM feature request #7715: Description sources should be handled same as DescriptionElement
- The section is called "Description Sources" we should either relabel them "References" as in DescriptionElementDetail...
- 09:14 AM feature request #7715: Description sources should be handled same as DescriptionElement
- Generally we need to discuss if moving the sources from Supplemental Data to Details View means removing them at firs...
- 09:12 AM feature request #7715 (Feedback): Description sources should be handled same as DescriptionElement
- Generally it works, but there comes a selection dialog for choosing the source type. This needs to be removed as for ...
- 11:54 AM Revision d2c62a2b (taxeditor): fix #7715: set title to reference and remove selection dialog for type of original source
- 11:52 AM bug #7699: NPE in CdmTransientEntityCacher.getCacheElement()
- Added AK as this is maybe a general ticket about handling of disposed in CdmTransientEntityCacher so might be interes...
- 11:50 AM bug #7699: NPE in CdmTransientEntityCacher.getCacheElement()
- It still exists sometimes
~~~
login :
editor version : 5.3.0.201809042248
server : ()
schema version :
os... - 11:35 AM feature request #7415: Implement ExternalLinks for OriginalSources in TaxEditor
- I can't reproduce this exception, I tested with nightly and rem_conf_am
- 10:43 AM feature request #7415 (Feedback): Implement ExternalLinks for OriginalSources in TaxEditor
- Adding an external link throws NPE
~~~
login : admin
editor version : 5.3.0.201809042248
server : test.e-taxon... - 09:14 AM feature request #7415 (Resolved): Implement ExternalLinks for OriginalSources in TaxEditor
- 11:25 AM bug #7294: keys block can not be disabled in tabless taxon page
- review after release
- 11:25 AM bug #7691: Empty "Bibliography" section
- review after release
- 11:21 AM bug #7582 (Duplicate): prevent from creating empty registrations
- 11:12 AM bug #7702 (Closed): corrupted hibernate session after previous error during save operation
- hard to review - time will show - closing ticket
- 10:58 AM feature request #7412 (Closed): Allow editing supplemental data for DescriptiveDataSets
- Seems to work as expected
- 10:58 AM Revision 7a187dd5 (cdm-dataportal): adapting Cichorieae_SearchTest to modified tagged text processing
- 10:18 AM Revision 2cdf2e95 (cdm-server): adjusting loglevel of bean initializers
- 10:15 AM bug #7484 (Closed): Protected titleCache handling not correct in Reference detail view
- This specific issue seems to work consistent now.
General review of titleCache behavior is still open for review ... - 09:58 AM Revision 370ab182 (cdmlib): avoiding too extensive logging by commenting all hardcoded loglevels
- 09:39 AM Revision d3719f12 (cdm-dataportal): skipping table cell creation for null media in compose_cdm_media_gallerie()
- 09:01 AM feature request #7706: Warning for reused Media is missing
- Is there a Media editing dialog at all? I was searching to check if the warning also works there but didn't find any....
- 08:50 AM feature request #7706 (Feedback): Warning for reused Media is missing
- Generally the ticket can be closed as it works if the above issues are either closed or moved to a new ticket.
- 08:49 AM feature request #7706: Warning for reused Media is missing
- Generally it works but there are some questions regarding various issues:
* layout: the form type changer is not ... - 08:48 AM Revision 361d492e (cdm-dataportal): adapting tests to modified synonymy page dom
- 07:56 AM bug #7698: CCE when creating new datasource
- works fine
- 07:55 AM bug #7698 (Closed): CCE when creating new datasource
09/04/2018
- 06:03 PM bug #7723 (Closed): PhycoBank unpublished data must not be visible in Portal
- Unpublished data visible in Portal, not in scientific name search, but as list under a reference including published ...
- 06:02 PM Revision 644a7b6e (cdm-dataportal): fixing typeDesignation sort order
- 04:34 PM bug #7722 (Feedback): NamePopupEditor: validation not working for rank genus
- the validation has explicitly limited to ranks at SpeciesOrBelow. Is it sufficient to also include genus an below or ...
- 02:03 PM bug #7722 (Closed): NamePopupEditor: validation not working for rank genus
- Validation button of genus without function (basionym, replaced syn. okay)
![] (picture672-1.png) - 04:01 PM bug #7582 (Resolved): prevent from creating empty registrations
- this has been solved mean while. Add according commits to the issue and close it.
- 04:00 PM feature request #7712: PhycoBank UI Reference detail size
- fixed, please review
- 04:00 PM feature request #7712 (Resolved): PhycoBank UI Reference detail size
- Applied in changeset commit:cdm-vaadin|8626f58493068136e66ff322a6834ce24cf53310.
- 12:03 PM feature request #7712: PhycoBank UI Reference detail size
- place citation detail below reference field and make both 100%wide
- 04:00 PM Revision 8626f584 (cdm-vaadin): fix #7712 more space for the citation detail in name editor
- 03:17 PM feature request #7624 (Resolved): Note field for Reference in Vaadin
- Applied in changeset commit:cdm-vaadin|85743e03023024ec6a9d0449fa91aa6bc08f5f6e.
- 03:17 PM Revision 85743e03 (cdm-vaadin): fix #7624 notes field for the RegistrationPopupEditor implemented
- 03:16 PM feature request #7600: public setters for entity collections
- with commmit:a55fe58a I implemented the suggested setter for annotations. This implementation is not generic and shou...
- 03:14 PM Revision a55fe58a (cdmlib): ref #7600 implementing setAnnotations()
- 02:30 PM Revision 13bd883d (cdm-dataportal): ref #7658, ref #7720 restoring css rule for .relation_sign
- 01:59 PM bug #7721 (Rejected): Contraint Violation Exception on saving Reference Popup Editor
der Fehler trat auf, als in einem Workingset in Vaadin in einer Referenz eine Section angelegt worden war (Submitte...- 01:58 PM feature request #7706 (Resolved): Warning for reused Media is missing
- please review
- 01:57 PM Revision ad31468a (taxeditor): ref #7706: add warning if media is referenced by more than one object
- 01:49 PM feature request #7644 (Resolved): Add "continued" flag to (Verbatim)Timeperiod
- Applied in changeset commit:cdmlib|72b0e291fb98b3dcab357b7b5f0160bb8818a000.
- 09:52 AM feature request #7644: Add "continued" flag to (Verbatim)Timeperiod
- We may not need a model change for this.
Instead we use a defined constant end date 9999-12-30 witch stands for "c... - 01:49 PM Revision 72b0e291 (cdmlib): fix #7644 fix failing test in parser and add "continued" parsing to all relevant patterns
- 01:44 PM feature request #7658 (Resolved): use new taxon relationship DTO webservice in portal
- implementation complete, please review
- 01:43 PM feature request #7720 (Closed): use new taxonRelationshipsDTO webservice for all taxon relations
- for details see #6682
since completion of #7658 the taxonRelationshipsDTO is used for misapplied names and invlali... - 01:36 PM Revision 27c31249 (cdm-dataportal): ref #7658 test for invalid designation
- 01:24 PM bug #7719 (New): UX Problems with context menu access in Bulkeditors
- in den Bulkeditoren kann man keine neuen Entities anlegen, ohne dass die Tabelle zu sehen ist.
Klickt man nicht auf... - 12:58 PM Revision 67c8cca9 (cdm-dataportal): ref #7658 miapplied names and invalid designations modified to use the taxonRelationshipsDTO webservice
- 12:58 PM Revision 2978b0c8 (cdm-dataportal): ref #7658 moving all tagged text functions to separate file
- 12:58 PM Revision 83dc60b9 (cdm-dataportal): ref #7658 adapting cdm_taxonRelationships() to new taxon relationship DTO webservice
- - test case
- extending tagged text functions
- adapting misapplied name redering - 12:58 PM Revision a01ad6fe (cdm-dataportal): typos
- 12:58 PM Revision f659b3dd (cdm-dataportal): work in grogress - unfinished
- 12:58 PM Revision 116fb348 (cdm-dataportal): ref #7658 work in progress with errors
- 12:05 PM Revision c02da888 (cdm-dataportal): revert small bug coming with merge of feature/specimenportal
- 11:17 AM feature request #7666: Remaining issues for "Formatter and DTO for taxon relationships (e.g. misapplied names)"
- Andreas Kohlbecker wrote:
> the NARROW_NO_BREAK is now a constant in the UTF8 class.
>
> But what about the
>
... - 10:59 AM feature request #7666: Remaining issues for "Formatter and DTO for taxon relationships (e.g. misapplied names)"
- Andreas Müller wrote:
> should we change Assignee of this ticket?
No need to, the NARROW_NO_BREAK is now a consta... - 09:45 AM feature request #7666: Remaining issues for "Formatter and DTO for taxon relationships (e.g. misapplied names)"
- should we change Assignee of this ticket?
- 09:44 AM feature request #7666: Remaining issues for "Formatter and DTO for taxon relationships (e.g. misapplied names)"
- When implementing:
>add NARROW NO-BREAK (\u202F) after doubtful marker as requested in #5492
can you please add... - 10:57 AM Revision 530b3394 (cdmlib): ref #7666 NARROW NO-BREAK in UTF8 class
- 10:46 AM Revision b3ac03bf (cdm-dataportal): merge develop into feature branch
- 10:38 AM feature request #7718 (Closed): New Registration: Exclude irrelevant reference types from list of existing publications
- Problem 1
In einem WorkingSet (Buch) sind Dutzende Arten neu beschieben. Die Buchreferenz sollte ein mal vorhanden ... - 10:23 AM feature request #7717: Implement "continued" in TimePeriod UI
- for the expected behavior see also TimePeriodTest.testContinued and .testToStringTimePeriod
- 09:55 AM feature request #7717 (Closed): Implement "continued" in TimePeriod UI
- The continued flag should be alternative to the end date. As described in #7644 either the flag is set or we have an ...
- 10:22 AM Revision 0d330678 (cdmlib): ref #7644 some further fine tuning on setting CONTINUED/end date in TimePeriod and some cleanup
- 09:53 AM Revision 9e82319e (cdmlib): ref #7644 implement "continued" in TimePeriod, still missing for most of the formats in parser
- 09:51 AM Revision 52f57468 (cdm-dataportal): smaller changes in dna part of tree view
- 09:40 AM feature request #5882: option (as new default) to show full citation of accepted name below taxon page title
- I can not really see why this **follows** the last scrutiny ticket.
**This** ticket is about nomenclatural referen... - 09:34 AM Revision 5e7f22d8 (cdmlib): ref #7666 adding NARROW NO-BREAK after doubtful marker - adapting test
- 09:16 AM Revision b7f100e5 (cdmlib): ref #7666 adding NARROW NO-BREAK after doubtful marker
09/03/2018
- 10:41 PM Revision 8740b447 (cdmlib): next try to fix usage of wrong signature in TaxEditor CacheLoader test
- 10:38 PM Revision f51e5bb0 (cdmlib): next try to fix usage of wrong signature in TaxEditor CacheLoader test
- 09:51 PM Revision 2661d3b8 (cdmlib): try to fix usage of wrong signature in TaxEditor CacheLoader test
- 09:51 PM Revision 9e0814ef (cdmlib): test trim in Excel import column recognition
- 09:14 PM Revision 539b7820 (cdmlib-apps): cleanup
- 09:09 PM Revision 9c82d689 (cdmlib): cleanup
- 07:56 PM Revision 2a6e6815 (cdmlib-apps): cleanup
- 07:54 PM Revision 0b9d6dad (cdmlib): cleanup
- 03:14 PM feature request #7412 (Resolved): Allow editing supplemental data for DescriptiveDataSets
- Applied in changeset commit:taxeditor|0186b94d518629ffe1e2c7cb0c4ad0ee59605002.
- 03:13 PM Revision 0186b94d (taxeditor): fix #7412 Allow editing supplemental data for DescriptiveDataSets
- 02:45 PM feature request #7715 (Resolved): Description sources should be handled same as DescriptionElement
- Applied in changeset commit:taxeditor|472f773b8ac025f074ab28f5ef674533cda95717.
- 11:53 AM feature request #7715 (Closed): Description sources should be handled same as DescriptionElement
- Description sources are currently in supplemental data, DescriptionElement in Details view.
Both should be in Deta... - 02:44 PM Revision 472f773b (taxeditor): fix #7715 Show sources for descriptions in DetailsView
- 02:28 PM bug #3992 (In Progress): [CHECK] Use last scrutiny instead of sec reference
- Last scrutiny is now imported as sec references for those taxa having a last scrutiny information. Otherwise PTaxon.p...
- 02:24 PM feature request #3990: [DISCUSS] How to implement citation suggestion to each taxon
- The former citations suggestions (deriving from the last scrutiny references, PTaxon.lastScrutinyFk) are now imported...
- 01:33 PM Revision 29e233c6 (taxeditor): ref #7674 Add aggregated description directly to matrix after creation
- 01:32 PM task #7553 (Closed): move TypeDesignationSetManagerIT to cdmlib
- All tests on integration server where successful, so we can close this issue.
- 12:12 PM task #7553 (Resolved): move TypeDesignationSetManagerIT to cdmlib
- please review
- 12:11 PM Revision bcf6a056 (cdm-vaadin): ref #7553: delete TypeDesignationSetManagerIT from vaadin
- 12:03 PM feature request #1847 (Rejected): Apply description sources (references) for a DescriptionBase to all included description elements
- This is not primarily a taxeditor ticket therefore I close it but open a similar ticket for cdmlib services: #7716
- 12:01 PM bug #7716 (In Progress): Apply description sources (references) for a DescriptionBase to all included description elements
- Currently webservices, exports, dataportal and aggregation algorithms do not include source of Description for Descri...
- 11:46 AM Revision b527f05c (taxeditor): ref #7674 Show complete taxon hierarchy
- 11:45 AM Revision 18c8b6f9 (taxeditor): ref #7674 Change label and style for default description
- 11:43 AM Revision 9c0f743e (cdmlib): ref #7674 Change label of default description
- 11:00 AM feature request #674: Turn off all concept-related functionality in the Editor in Preferences
- The idea is to simplify the UI for standard users
- 10:48 AM Revision 1e444ccf (cdmlib): ref #7553: move TypeDesignationSetmanagerTest to cdmlib
- 10:45 AM Revision 71571fbe (cdmlib-apps): ref #3992 adapt EuroMedActivator to last scrutiny changes
- 10:44 AM Revision 0d76bb7d (cdmlib-apps): add tests for occurrences sources with unwanted whitespaces
- 10:43 AM Revision d0c77267 (cdmlib-apps): ref #3992, ref #7713, ref #3990 add test for differing synonym relation references
- 10:42 AM Revision d19ddd46 (cdmlib-apps): cleanup
- 10:42 AM Revision e1d0f581 (cdmlib-apps): ref #3992, ref #7713, ref #3990 Atomize last scrutiny references
- 10:24 AM Revision 57a2a42f (taxeditor): ref #7674 Adjust tree path according to default taxon description
- 10:23 AM Revision aac70fda (cdmlib): ref #7674 Add equals() and hashCode() to RowWrapperDTO
- 07:25 AM Revision fca09e81 (cdmlib): ref #7674 Fix initialization problems
09/01/2018
- 06:29 PM feature request #7714 (Rejected): PhycoBank UI Restrictions for reference types
- Do not allow registrations under Reference types "Journal", "Printseries"
1. there are nomenclatural acts in artic... - 09:17 AM task #7713: Atomize last scrutiny references
- Find last scrutiny references not in use:
~~~
SELECT *
FROM Reference AS r
WHERE (RefId NOT IN
(SELECT L... - 08:26 AM task #7713: Atomize last scrutiny references
- ~~~
SELECT RefId, Notes, RefYear, RefCategoryFk, RefCache, NomRefCache, PreliminaryFlag, InRefFk, Title, NomTitleAb...
08/31/2018
- 11:20 PM task #7713 (In Progress): Atomize last scrutiny references
- 11:17 PM task #7713 (In Progress): Atomize last scrutiny references
- Last scrutiny references currently are all(?) flat and with protected cache. They should:
* ~~use inreferences (s... - 06:46 PM Revision 5cfd066c (cdm-dataportal): ref #7658 test case for Nepenthes abalata
- 06:18 PM feature request #7712 (Closed): PhycoBank UI Reference detail size
- Field "Reference detail" not long enough for standard entries,
e.g. 100, pl. 100, fig. 50-60 (see screen shot)
Prob... - 05:40 PM Revision 10e3087e (cdm-dataportal): ref #5753 adapting test to final decissions
- 05:16 PM Revision 41fb1151 (cdm-dataportal): more tests for misapplied names
- 04:34 PM Revision 0207cf2c (cdm-dataportal): updating selenium documentation by notes on compatible FF versions
- 02:29 PM Revision 523a1fad (cdm-vaadin): removing debug code line
- 01:06 PM Revision 90f19d04 (cdmlib): code cleanig
- 01:06 PM Revision ec8f5e38 (cdmlib): code cleanig
- 12:03 PM Revision 1dc37073 (taxeditor): ref #7674 Create default taxon description when adding specimens
- 12:02 PM Revision 041e26e2 (cdmlib): ref #7674 Create default taxon description when adding specimens
- 11:08 AM feature request #7666: Remaining issues for "Formatter and DTO for taxon relationships (e.g. misapplied names)"
- Ok from this future perspective it makes sense to decouple the loading of the references and the display of the MANs....
- 01:47 AM bug #7711 (Resolved): Bugs in media gallery
- * ~~when removing a Media from image gallery it is immediately saved but should be saved only after save command, ins...
- 12:33 AM bug #7709 (In Progress): CdmTransientEntityCacher cannot handle multiple unpersisted entities of the same type
- I reverted using UUID as key in CdmEntityCacheKey because
* the eu.etaxonomy.cdm.cache.CdmTransientEntityCacher s... - 12:13 AM Revision 02d5f1f1 (taxeditor): cleanup and better use of generics
08/30/2018
- 11:52 PM Revision b0538039 (cdmlib): javadoc, cleanup and rename permanentCacher
- 11:49 PM Revision 3c50e62a (cdmlib): javadoc, cleanup and rename permanentCacher
- 11:48 PM Revision 59259b05 (cdm-vaadin): rename permanentCacher setter
- 11:34 PM Revision 2c8b687b (taxeditor): cleanup
- 11:22 PM Revision df75b75c (cdmlib): ref #7709 remove NPE
- 11:12 PM Revision 7b74ba3d (taxeditor): ref #7709 use id instead of uuid for CdmEntityCacheKey in ConversationalTransientEntityCacher
- 11:03 PM Revision 7ad7b0fa (cdmlib): ref #7709 cleanup CdmTransientEntityCacher
- 10:45 PM Revision 57e761cd (cdmlib): ref #7709 revert using uuid in CdmEntityCacheKey as key part
- 10:39 PM Revision 481d494a (cdmlib): cleanup
- 10:39 PM Revision 3c5c2395 (cdmlib): ref #7709 revert using uuid in CdmEntityCacheKey as
- 10:38 PM Revision 7b2e142b (taxeditor): ref #7709 use CdmBase constructor instead of class and id
- 10:38 PM Revision ed3f3e9a (taxeditor): cleanup
- 06:34 PM bug #7641 (Closed): Reference editor: Error when incerting several new authors into a new author team
- Test 1: #3, #6, 3.screenshot: fehlerhaftes Team komplett gelöscht und neu angelegt mit 2 Autoren aus der Liste und 2 ...
- 12:22 PM bug #7641: Reference editor: Error when incerting several new authors into a new author team
- Problem solved, please test.
- 12:20 PM bug #7641 (Resolved): Reference editor: Error when incerting several new authors into a new author team
- Applied in changeset commit:cdm-vaadin|fe3180d3be765b382f150b613f9936c711af9823.
- 06:11 PM feature request #7666 (In Progress): Remaining issues for "Formatter and DTO for taxon relationships (e.g. misapplied names)"
- Andreas Kohlbecker wrote:
> A disadvantage of the current implememtation of the taxon relationships webservice and D... - 05:08 PM feature request #7666: Remaining issues for "Formatter and DTO for taxon relationships (e.g. misapplied names)"
- A disadvantage of the current implememtation of the taxon relationships webservice and DTO when being used in the dat...
- 03:13 PM bug #7709: CdmTransientEntityCacher cannot handle multiple unpersisted entities of the same type
- Andreas Kohlbecker wrote:
> I forgot one thing:
>
> I am a bit frightend about the change you made in the cacher ... - 03:11 PM bug #7709: CdmTransientEntityCacher cannot handle multiple unpersisted entities of the same type
- I discussed with Katja the handling of un-persisted objects. She also thinks that unpersisted objects should/are not ...
- 02:20 PM bug #7709: CdmTransientEntityCacher cannot handle multiple unpersisted entities of the same type
- I forgot one thing:
I am a bit frightend about the change you made in the cacher as this is touching an essential ... - 02:17 PM bug #7709: CdmTransientEntityCacher cannot handle multiple unpersisted entities of the same type
- Andreas Müller wrote:
> Can you please check if this implementation solves your problems
My problem has been sol... - 02:12 PM bug #7709: CdmTransientEntityCacher cannot handle multiple unpersisted entities of the same type
- Andreas Müller wrote:
> Is this on purpose assigned to me?
>
You are the default assignee for cdmlib, as this t... - 02:10 PM bug #7709 (Feedback): CdmTransientEntityCacher cannot handle multiple unpersisted entities of the same type
- Can you please check if this implementation solves your problems and if you generally agree with the implementation?
... - 02:06 PM bug #7709 (Resolved): CdmTransientEntityCacher cannot handle multiple unpersisted entities of the same type
- Applied in changeset commit:cdmlib|67ff6af5f4a24c899385e13c671c8071d301f3e7.
- 01:39 PM bug #7709: CdmTransientEntityCacher cannot handle multiple unpersisted entities of the same type
- With commit c5eb9820 I introduced more generics to the cacher (not yet 100% finished). Maybe we need to adapt externa...
- 01:33 PM bug #7709 (In Progress): CdmTransientEntityCacher cannot handle multiple unpersisted entities of the same type
- Is this on purpose assigned to me?
If yes, please give more info what is meant by PersonField. PersonField is not ... - 12:15 PM bug #7709 (Feedback): CdmTransientEntityCacher cannot handle multiple unpersisted entities of the same type
the following code would fail:
~~~java
newP1 = Person.NewInstance();
newP2 = Person.NewInstance();
pf1 = ...- 02:39 PM task #7553: move TypeDesignationSetManagerIT to cdmlib
- Hallo Katja, könnntest du dieses ticket übernehmen?
Andreas
- 02:18 PM Revision b1b42293 (cdmlib): ref #7709 javadoc
- 01:47 PM Revision 67ff6af5 (cdmlib): fix #7709 use uuid instead of id for CdmEntityCacheKey
- 01:37 PM Revision 6dc22ea5 (cdmlib): minor
- 01:37 PM Revision c5eb9820 (cdmlib): ref #7709 use more generics for CdmCacher (not completed yet)
- 01:30 PM bug #7710 (New): Server info is missing in case of RemoteAccessException
- The method `MessagingUtils.getContextInfo()` generates the info.
It seems like `CdmStore.getActiveCdmSource()` ret... - 01:25 PM Revision e0812cf2 (taxeditor): ref #7674 Enhance sorting of matrix rows
- - aggregated taxon description always on top
- specimen descriptions based on id - 12:39 PM Revision 9f10abf7 (taxeditor): Merge branch 'develop' into taxonDescription
- 12:36 PM Revision 25f9ee23 (cdmlib): Merge branch 'develop' into taxonDecription
- 12:21 PM Revision fa285af0 (cdm-vaadin): logging
- 12:20 PM Revision fe3180d3 (cdm-vaadin): fix #7641 ignoring unpersisted entities in ToOneRelatedEntityReloader
- 11:45 AM bug #7686 (Resolved): Specimen title cache issues in data portal specimen table
- All the UI issues have been solved.
The issue with the DerivedUnit with no FieldUnit is handled in #7704 - 11:24 AM feature request #5972: Prevent user from unwanted author and reference updates
- > we might also handle this via rights&roles but probably this is not adequate. Generally we allow those users to upd...
- 11:15 AM feature request #7708 (New): Unify handling of i18n title/representation in identifiable entities
- Copied from #7707:
Also there are IdentifiableEntity someclasses which have similar but not equal data structures ... - 11:13 AM Revision 269e42e0 (cdm-dataportal): ref #7686 Better way to check for empty string
- 11:13 AM feature request #7707 (New): Handle title / titleCache similar to Media in Classification and other classes
- In #7705 the best way to handle i18n-title and titleCache in the UI for classes with "simple titleCache" (titleCache ...
- 10:58 AM task #6864 (Duplicate): [DISCUSS] Title and titleCache in Media
- This is mostly a duplicate for #7705
- 10:48 AM feature request #7706 (Closed): Warning for reused Media is missing
- If Media is linked from multiple data the according warning is missing in the details view. This is critical.
===
... - 10:45 AM feature request #7705: Improve handling of title/titleCache and multi-language support for Media
- Katja, Patrick: do you think we can move this ticket to one of the current target versions (5.3 or 5.4)?
- 10:30 AM feature request #7705 (New): Improve handling of title/titleCache and multi-language support for Media
- We need i18n support for Media title and description if i18n support is switched on in preferences.
Also we to edi... - 10:24 AM Revision b511fb13 (cdm-dataportal): ref #7686 Better way to check for empty string
- 09:46 AM feature request #7704: Dataportal specimen table should be able to show DerivedUnits without a FieldUnit
- Patrick Plitzner wrote:
> This case can happen for type specimens that were created without a FieldUnit and just ass... - 08:04 AM feature request #7704 (Closed): Dataportal specimen table should be able to show DerivedUnits without a FieldUnit
- The current implementation of the specimen table works only on FieldUnits. Each row represents a FieldUnit and if ext...
- 07:57 AM bug #7703 (New): Multiple names cannot be shown in TypeDesignationDetailElement for specimens
- If a SpecimenTypeDesignation has more than one name set as `typifiedName` the DetailsView shows the following:
![]... - 07:49 AM Revision 6a660dc3 (cdm-dataportal): ref #7686 Remove citation label
- 07:20 AM Revision 0dd9be37 (cdm-dataportal): ref #7686 Fix check for empty string
- 06:53 AM Revision 76c5c9b7 (cdm-dataportal): ref #7686 Fix check for empty string
08/29/2018
- 06:50 PM bug #7702 (Resolved): corrupted hibernate session after previous error during save operation
- Applied in changeset commit:cdm-vaadin|7450d44bf31c73a41b69d836d1b87f0305784ad7.
- 06:11 PM bug #7702 (Closed): corrupted hibernate session after previous error during save operation
- This is the same problem as in #7559
the bug has not 100% been fixed be the changes made last time.
After this ... - 06:50 PM Revision 7450d44b (cdm-vaadin): fix #7702 always clearing session in finally clause
- 06:31 PM Revision 0f1cc6a3 (cdmlib): ref #7702 avoiding NPE in TargetEntityStates when pervious state is null
- 05:12 PM Revision 64688697 (cdmlib): ref #7686 Do not use null for keys in map (JSON error)
- 04:54 PM bug #7667 (Feedback): NoHttpResponseException for large queries in bulk editor
- I could not reproduce this anymore.
I tested on production and test server. - 04:47 PM Revision a5b11885 (cdm-dataportal): ref #7686 show info for unset type status
- 04:34 PM Revision cd175378 (cdmlib): ref #7686 Do not ignore types without type status
- 04:33 PM Revision 01371d61 (cdmlib): ref #7686 Use titleCache if no identifier can be found
- 04:28 PM bug #7528 (Closed): Allow changing the Registration status in the RegistrationWorkingsetEditor
- For curators all status are available but the selection of the available status is limited to guarantee a directed an...
- 04:09 PM Revision 4ad74423 (taxeditor): Use title cache as label when protected
- 04:08 PM Revision 2d6348e5 (cdm-dataportal): ref #7686 Add label to link to specimen page
- 03:24 PM Revision b317a252 (cdm-vaadin): fixing LIE related to RegistrationPopupEditor
- 03:20 PM feature request #7701 (New): Add link to typified name on specimen page of data portal
- "Anmerkung: Auf der Specimen Seite fehlt noch ein Link auf den typifizierten Namen, entsprechend den associated taxa."
- 03:19 PM bug #7686: Specimen title cache issues in data portal specimen table
- Andreas M.:
* Gibt der verwendete Webservice grundsätzlich nur Fieldunits oder werden auch DerivedUnits zurückgege... - 03:16 PM bug #7686: Specimen title cache issues in data portal specimen table
- Walter:
"Hierzu dann gleich auch noch zwei Anmerkungen:
Den Titel mit der ID ist unschön, zumal ja diese I... - 02:14 PM bug #7699: NPE in CdmTransientEntityCacher.getCacheElement()
- Andreas Müller wrote:
> On rem_conf_am (see stacktrace) and search for "A*"
I cannot reproduce this here either - 01:32 PM bug #7699: NPE in CdmTransientEntityCacher.getCacheElement()
- On rem_conf_am (see stacktrace) and search for "A*"
- 01:25 PM bug #7699 (Feedback): NPE in CdmTransientEntityCacher.getCacheElement()
- I cannot reproduce this. On which DB did you test? Does it always happen for any search on any DB?
- 11:59 AM bug #7699 (In Progress): NPE in CdmTransientEntityCacher.getCacheElement()
- NPE when searching for specimen (but probably not only then).
#9174 (duplicate) suggests that it happens when the ... - 01:51 PM bug #7500: Can't open both related accepted taxa of reused MAN
- Should I already review this ticket?
- 01:24 PM bug #7698 (Resolved): CCE when creating new datasource
- Applied in changeset commit:taxeditor|954982ef90bc8d6a36def59139fe9e96a2a7becc.
- 11:06 AM bug #7698 (Closed): CCE when creating new datasource
- ~~~
login : admin
editor version : 5.3.0.201808280657
server : test.e-taxonomy.eu (edit-test) / rem_conf_am
schem... - 01:24 PM Revision 954982ef (taxeditor): fix #7698 Fix class cast exception
- 01:00 PM feature request #7700: use TypeDesignationSetManager for creating typedesignation string in cdmlightExport
- see also #7695
the typedesignationSetManager already do the deduplication of specimen for one homotypical group an... - 01:00 PM feature request #7700 (Closed): use TypeDesignationSetManager for creating typedesignation string in cdmlightExport
- 12:23 PM bug #7371: Deleting Polytomous Key throws NPE
- please review
- 12:23 PM bug #7371 (Resolved): Deleting Polytomous Key throws NPE
- Applied in changeset commit:taxeditor|de55078200c8f2e52f4784ed9aa6b1c6611ddb86.
- 12:23 PM Revision de550782 (taxeditor): fix #7371: fix NPE when deleting polytomous key
- 12:16 PM bug #4429 (Rejected): List of available software sites gets overwritten when updating product
- Not relevant anymore as update sites are hardcoded now.
- 09:21 AM feature request #7695 (In Progress): web service providing compact TypeDesignation representation for homotypic groups and individual taxa
- I wonder if we should really require a single name uuid as obligatory input parameter. The semantics of the service s...
08/28/2018
- 04:05 PM Revision 27bddb2a (cdm-dataportal): php doc
- 04:00 PM bug #7692 (Worksforme): Empty "Specimens" section
- This is not a bug in the webservice. The Specimen in question actually has no FieldUnit.
So this is primarily a data... - 03:48 PM bug #7692: Empty "Specimens" section
- The actual problem is that the webservice `portal/taxon/fb987766-3ea5-45e0-a606-ca9b9d1253cf/associatedFieldUnits.jso...
- 03:08 PM bug #7692 (In Progress): Empty "Specimens" section
- The web service returns one specimen for this taxon:
http://api.cybertaxonomy.org/caryo_nepenthaceae/occurrence/by... - 03:38 PM Revision 035aa43d (cdm-dataportal): Merge branch 'develop' into hotfix/5.2.1
- 03:33 PM Revision 02f3768c (cdm-dataportal): ref #7692 avoiding php warning related to specimen table
- 03:01 PM bug #7691 (Resolved): Empty "Bibliography" section
- Applied in changeset commit:cdm-dataportal|850092a77002da04822cb23ce097e58b05ecbd5d.
- 03:01 PM Revision 850092a7 (cdm-dataportal): fix #7691 supressing bibliography when content is empty
- 02:31 PM bug #7500 (Resolved): Can't open both related accepted taxa of reused MAN
- Applied in changeset commit:taxeditor|c5cfeefde69828735b910d91075f0d7bdb42464f.
- 01:43 PM bug #7500 (In Progress): Can't open both related accepted taxa of reused MAN
- 02:31 PM Revision c5cfeefd (taxeditor): fix #7500: for misapplied names related to different taxa use chooseAcceptedTaxonDialog
- 01:52 PM bug #7693 (Duplicate): keys section can not be hidden in tabless taxon page
- this is a duplicate of #7294
- 07:39 AM bug #7693 (Duplicate): keys section can not be hidden in tabless taxon page
- When the tabless taxon page mode is enabled, the "Section/Tab visibility" setting for the "keys" section has no effect.
- 01:48 PM bug #7294 (Resolved): keys block can not be disabled in tabless taxon page
- Applied in changeset commit:cdm-dataportal|48a6d7e8e45c3140d00fc2b8ee5b66f472aa5a5a.
- 01:47 PM Revision 8a1b451e (cdm-dataportal): php doc
- 01:47 PM Revision 48a6d7e8 (cdm-dataportal): fix #7294 fixing broken tab/page-section disabling
- 01:39 PM task #6778: remove big objects from taxeditor git repository
- Andreas Kohlbecker wrote:
> Eine weitere Möglichkeit ist der Umzug auf Gitlab.com.
>
> "To celebrate today's good... - 10:57 AM task #6778: remove big objects from taxeditor git repository
- Eine weitere Möglichkeit ist der Umzug auf Gitlab.com.
"To celebrate today's good news we've permanently raised ou... - 01:38 PM Revision 9da648a0 (taxeditor): ref #7680: fix NPE for excluded notes
- 01:33 PM Revision e04a2b79 (taxeditor): ref #7680: unplaced, excluded and publish checkboxes should be available in NewTaxonnodeWizard
- 01:30 PM feature request #7680 (In Progress): Refactor TaxonNodeDetailElement
- the problems of not visible unplaced, excluded and publish checkboxes are fixed now. But to implement the NewTaxonNod...
- 12:43 PM bug #6289 (Closed): “Back to images” link as “Back to taxon page” when in table-less mode
- fixed and tested
- 12:41 PM bug #6289 (Resolved): “Back to images” link as “Back to taxon page” when in table-less mode
- Applied in changeset commit:cdm-dataportal|78bac306ef38b006fb5e622ce73f3ae699e6a10b.
- 12:41 PM Revision ff5d6ecb (cdm-dataportal): typo
- 12:41 PM Revision 78bac306 (cdm-dataportal): fix #6289 'back to taxon page' link label for media page
- 12:28 PM bug #7563 (Closed): requests with %2F in URL are rejected by apache
- 12:28 PM bug #7563 (Resolved): requests with %2F in URL are rejected by apache
- 12:25 PM Revision 5044311f (taxeditor): Set the bgColor of summary row to gray
- 11:52 AM bug #7576 (Closed): Set Publish Flag for Subtree Dialog - Problems with Progressmonitor
- Ok, the most severe problems seem to be fixed so far.
- 11:47 AM task #7596 (Closed): PhycoBank Portal - Formatting
- 11:35 AM feature request #7666: Remaining issues for "Formatter and DTO for taxon relationships (e.g. misapplied names)"
- Problems with current implementation of the new webservice:
1. `relations.representation_L10n` and `relations.repr... - 11:09 AM feature request #7695: web service providing compact TypeDesignation representation for homotypic groups and individual taxa
- The TypeDesignationSetManager needs to be modified, so that it can be used for multiple usecases. By default it valid...
- 10:28 AM feature request #7695: web service providing compact TypeDesignation representation for homotypic groups and individual taxa
- changing the controller endpoint to `/name/{uuid}/homotypicGroupTypeDesignationsDTO`, issue description updated.
- 09:10 AM feature request #7695 (In Progress): web service providing compact TypeDesignation representation for homotypic groups and individual taxa
The webservice path:
* ~~`typedesignations/byTaxon/{taxon_uuid}`, `typedesignations/byHomotypicalGroup/{group_...- 10:51 AM bug #7679 (Closed): NPE when creating root child in classification
- OK, seems to work now.
- 08:52 AM bug #7679: NPE when creating root child in classification
- Andreas Müller wrote:
> Looks like commit 46f913aa went only into the hotfix branch but needs to be committed to bot... - 10:45 AM Revision 0f793f18 (cdmlib): ref #7695 initial implementation of the /name/{uuid}/homotypicGroupTypeDesignationsDTO webservice - with problems
- 10:43 AM Revision e8daeef6 (taxeditor): minor
- 10:42 AM Revision df5966b8 (cdmlib): initial implementation of the /name/{uuid}/homotypicGroupTypeDesignationsDTO webservice - with problems
- 10:26 AM bug #7677 (Resolved): Nomenclatural Status is always set to nom illeg in details view
- 10:25 AM Revision 5e188bc9 (cdmlib): ref #7694: adapt typedesignation output for cdmlight export
- 09:20 AM feature request #7696 (New): use compact type representations in the synonymy as provided by the typedesignations/byTaxon/{taxon_uuid} service
* Source references should be shown as footnotes to the types
Note: see `compose_registation_dto($registration...- 09:10 AM feature request #7694 (Duplicate): cdmlight export output of types needs to be adapted
-
Relativ einfach sollte das (zumindest bei Nepenthes) für die nicht-atomisierten Typenzitate sein; da steht das Ori... - 08:51 AM Revision ff687253 (taxeditor): ref #7679 Evaluate DB prefs for publish flag
08/27/2018
- 10:25 PM Revision 65b0eef9 (taxeditor): ref #7677: set default type for nomenclatural status while creating new status
- 10:24 PM bug #7677: Nomenclatural Status is always set to nom illeg in details view
- yes you are right, it is better to create a new status with default type nom. illeg. then we do not have to set the s...
- 08:30 PM bug #7677 (Feedback): Nomenclatural Status is always set to nom illeg in details view
- The implementation is still not fully correct. If a NomenclaturalStatus WITHOUT type exists the type will be set to n...
- 07:38 PM bug #7681 (Closed): Update date field when editing parse field in TimePeriodElement
- Looks fine now.
Only, I would prefer to add some color to the parse field and/or the parse label. But this is not... - 07:33 PM bug #7679 (Feedback): NPE when creating root child in classification
- Looks like commit 46f913aa went only into the hotfix branch but needs to be committed to both branches.
Can't test... - 03:25 PM bug #7679 (Resolved): NPE when creating root child in classification
- 03:00 PM bug #7679 (Feedback): NPE when creating root child in classification
- The setting of the publish flag does not yet work in this case. It should either be "true" (but currently is "false")...
- 01:49 PM bug #7679 (Resolved): NPE when creating root child in classification
- Andreas Müller wrote:
> Can't we put this to resolved already?
As we already moved it to 5.2 because of the hotfi... - 01:30 PM bug #7679: NPE when creating root child in classification
- Can't we put this to resolved already?
- 06:08 PM bug #7689: Mutliple representation exception when creating taxon nodes
- We should try to fix this soon if it is reproducable
- 03:46 PM bug #7689 (Worksforme): Mutliple representation exception when creating taxon nodes
- Steps to reproduce:
1. Create a root taxon via right-click on classification
2. Directly create a second one on t... - 05:25 PM bug #7555 (Closed): TaxonServiceImpl.findTaxaAndNames() broken for cichoriae searching for "Lapsana communis"
- Andreas Müller wrote:
> The issue described in the description (as link) seems to be solved.
>
> The 2 later link... - 05:11 PM bug #7555: TaxonServiceImpl.findTaxaAndNames() broken for cichoriae searching for "Lapsana communis"
- Andreas Müller wrote:
> Maybe it is related that for Nepenthes alata no specimen appear: http://caryophyllales.org/n... - 05:08 PM bug #7692 (Worksforme): Empty "Specimens" section
- In some cases the tabless taxon page shows an empty "Specimens" section.
Example: http://caryophyllales.org/nepent... - 05:07 PM bug #7691 (Closed): Empty "Bibliography" section
- In some cases the tabless taxon page shows an empty "Bibliography" section.
Example: http://caryophyllales.org/nep... - 04:50 PM Revision e8d37b23 (taxeditor): ref #7674 Change bgColor of aggregated taxon description
- 04:11 PM bug #7690 (New): adapt available typedesignation editors to name rank
- The RegistrationWorkingsetEditor offers a selection dialog for NameTypeDesignationEditor and SpecimenTypeDesignationE...
- 03:25 PM Revision 46f913aa (taxeditor): ref #7679 Evaluate DB prefs for publish flag
- 02:17 PM feature request #7688 (New): Agent (person/team/instituion) page
- To make agents (persons, teams, institutions) linkable and give an overview on all data available on an agent we need...
- 02:03 PM bug #7687 (Closed): NPE in TypeDesignationSetManager
- Fix looks ok!
- 01:57 PM bug #7687: NPE in TypeDesignationSetManager
- Hallo,
habe ich vorläufig gefixt: commit:73e4daa. Wird heute Nacht eingespielt.
Andreas K., schaust du nochma... - 01:55 PM bug #7687 (Closed): NPE in TypeDesignationSetManager
Arbeit mit Vaadin http://test.e-taxonomy.eu/cdmserver/phycobank_production/app/registration#!workingset/8295ec6c...- 01:49 PM feature request #7217: SpecimenTypedesignationsWorkingsetEditor: Longitute Latitude fields allow values in degrees minutes seconds formats
- Andreas Kohlbecker wrote:
>...
> Maybe the http://docs.geotools.org/ provide a suitable parser? Also a possibility,... - 01:36 PM task #7089: Rights and Roles Workshop 2017-11
- I think it is better to close this ticket and open a new "Open issues for Rights and Roles" ticket.
- 01:31 PM task #7089 (In Progress): Rights and Roles Workshop 2017-11
- It is linked from [[WorkshopRightsAndRoles2017-11]], therefore I think we could close it without losing anything, BUT...
- 12:33 PM task #7089: Rights and Roles Workshop 2017-11
- Do we want to keep this ticket open?
- 01:31 PM bug #7686 (Closed): Specimen title cache issues in data portal specimen table
- 
Walter:
* Der Name nach Holotype of wird doppelt ausgegeben.
* Vor dem Link zum Herbarb... - 01:28 PM feature request #7685 (Closed): Add Selenium tests for specimen table in data portal
- * add test data to 160.45.63.201/cdm_integration_reference
* create new dump which needs to be stored in edit-integr... - 01:22 PM bug #7528 (In Progress): Allow changing the Registration status in the RegistrationWorkingsetEditor
- This issue should not be closed as duplicate as it contains the references to the code changes.
I will rather clo... - 01:20 PM feature request #7618 (Duplicate): PhycoBank Curator rights
- closing this issue as duplicate of #7528 the discussion on the status `rejected` has moved to #7684
- 01:01 PM bug #7676 (Feedback): Suchfunktionalität in Registration UI Dateneingabe
- In der Ticketbeschreibung sind verschiedene Probleme beschrieben.
1. Suche nach der Registrierung (100267) für den... - 12:37 PM bug #6247 (Rejected): Check if concept relationships are correctly implemented in Gefäßpflanzenimport B
- As the redlists are not using the platform anymore we do not need the import anymore.
- 12:09 PM bug #7683 (In Progress): external links Audit table should allow uuid to be null
- 12:09 PM bug #7683: external links Audit table should allow uuid to be null
- This is generally the case already when databases are created via hibernate CREATE (see e.g. edit-test.cdm_test_eurom...
- 11:32 AM bug #7683 (Closed): external links Audit table should allow uuid to be null
- when deleting an external link an com.mysql.jdbc.exceptions.jdbc4.MySQLIntegrityConstraintViolationException: Column ...
- 11:56 AM Revision 036b1573 (taxeditor): move the parse field at the top of datedetails and add tooltip
- 11:49 AM bug #7682 (In Progress): Point.precision must not be 0 by default
- Already removed default value in class, still need update script to remove all 0 values from existing data
- 09:48 AM bug #7682 (Closed): Point.precision must not be 0 by default
- It seems as if there is a problem with the embedded type Point. Whenever long and lat are set the radius is always se...
- 11:46 AM Revision e6a65453 (cdmlib): ref# 7682 remove default value for Point.precision
- 11:32 AM feature request #7415: Implement ExternalLinks for OriginalSources in TaxEditor
- the fields are available now, but the AUD table definition needs to be updated, the uuid should be allowed to be null...
- 10:46 AM Revision 9ad45667 (taxeditor): ref #7415: add external link section to original source part
- 10:37 AM Revision 414b03e6 (taxeditor): ref #7415: add external link section to original source part
- 09:36 AM Revision 8be7bd71 (taxeditor): ref #7674 Remove unused class
- 09:35 AM Revision 1cc08dc4 (taxeditor): ref #7674 Disable cell editor for aggregated taxon descriptions
- 09:12 AM Revision d4aefb3a (taxeditor): ref #7674 Do not aggregate taxon descriptions
- 09:09 AM Revision 61473b5a (taxeditor): ref #7674 Show taxon descriptions as rows in matrix
08/24/2018
- 12:39 PM Revision a7818829 (taxeditor): fix #7681 Update date field when editing parse field
- 12:39 PM bug #7681 (Resolved): Update date field when editing parse field in TimePeriodElement
- Applied in changeset commit:taxeditor|9be67535c6cfd81916477c02af59ea94dcf4487b.
- 12:38 PM bug #7681 (Closed): Update date field when editing parse field in TimePeriodElement
- The date fields are only updated when a correct date could be parsed.
This could be misleading if i.e. you clear t... - 12:38 PM Revision 9be67535 (taxeditor): fix #7681 Update date field when editing parse field
- 11:52 AM Revision 17acac26 (taxeditor): ref #7679 Change order of UI elements
- 11:35 AM Revision 22daad3e (taxeditor): ref #7679 Change order of UI elements
- 11:32 AM Revision 9e01ec16 (taxeditor): ref #7679 Temporary hotfix for NPE in taxon node wizard
- 11:26 AM Revision 9d74201a (taxeditor): ref #7679 Temporary hotfix for NPE in taxon node wizard
- 11:24 AM Revision 39b63571 (taxeditor): Updated version in pom / project files to taxeditor version : 5.2.2 and cdmlib version : 5.2.0
- 11:13 AM Revision eabf0e1d (cdmlib): ref #7075 fix bugs in MediaExcelImport
- 10:28 AM bug #7679: NPE when creating root child in classification
- I created a new ticket for the redesign -> #7680
- 10:26 AM bug #7679: NPE when creating root child in classification
- While investigating this issue I realized that the *NewTaxonNodeWizard* does not work like all the other "new" wizard...
- 08:36 AM bug #7679: NPE when creating root child in classification
- When entering data in "Detail" an exception is thrown with every key stroke
~~~
login : admin
editor version : 5... - 10:27 AM feature request #7680 (Closed): Refactor TaxonNodeDetailElement
- Copied from #7679:
While investigating this issue I realized that the *NewTaxonNodeWizard* does not work like all ...
08/23/2018
- 05:28 PM bug #7679 (In Progress): NPE when creating root child in classification
- 05:28 PM bug #7679 (Closed): NPE when creating root child in classification
- When calling "new" on classification, the dialog does not show the "publish" checkbox for some reason. Also the unpla...
- 05:11 PM Revision 737221ab (cdmlib): ref #7674 Fix lazy init exception
- 04:09 PM bug #7677: Nomenclatural Status is always set to nom illeg in details view
- ~~~ sql
select distinct name.id nameId, name.fullTitleCache fullTitle, defNow.titleCache currentStatus, a.date, ns.r... - 11:39 AM bug #7677: Nomenclatural Status is always set to nom illeg in details view
- This is the statement to get all nomenclatural status changes for update and create and which are changed to nom. ill...
- 10:10 AM bug #7677 (Resolved): Nomenclatural Status is always set to nom illeg in details view
- 10:09 AM bug #7677 (Closed): Nomenclatural Status is always set to nom illeg in details view
- Hallo,
es scheint so, dass die default-Einstellung für Nomenclatural Status als "nom. illeg." einen gefährlichen N... - 11:26 AM feature request #7678 (New): Show exception message if editor update fails
- For example IOException when the hard drive is full
~~~
java.io.IOException: Es steht nicht genug Speicherplatz a... - 11:16 AM Revision 3da4a5e6 (taxeditor): ref #7674 Fix saving of aggregated description
- 11:15 AM Revision fcd9dc61 (taxeditor): ref #7674 Fix class cas exceptions
- 11:06 AM Revision 7c245320 (taxeditor): Fix possible widget disposed exception
- 10:59 AM Revision 6867fa49 (cdmlib): ref #7674 Make aggregate service readOnly=false
- 10:48 AM Revision e4f8b74d (taxeditor): fix bug in nomenclatural status details view
- 09:48 AM Revision be0fbb67 (cdmlib): ref #7674 Change method name
- 09:37 AM Revision d1975e7b (taxeditor): Merge branch 'hotfix/5.2.1'
- 09:12 AM Revision 451f02f6 (taxeditor): fix bug in nomenclatural status element
- 08:52 AM Revision cf7bb147 (taxeditor): Updated version in pom / project files to taxeditor version : 5.2.1 and cdmlib version : 5.2.0
08/22/2018
- 05:50 PM Revision e15dfd39 (taxeditor): ref #7674 Adapt to cdmlib change(Add aggregated description to data set)
- 05:49 PM Revision 32d09233 (cdmlib): ref #7674 Add aggregated description to data set
- 04:31 PM bug #7672: use taxonRelationship formatter for label in referencing objects view
- Maybe we should first consider moving formatting to server side as it is faster and as we may also make formatting de...
- 02:31 PM bug #7672 (New): use taxonRelationship formatter for label in referencing objects view
- Die Formatierer der Konzeptrelationen im RefObjects View scheinen die Relationen noch falsch herum zu beschreiben. Au...
- 03:41 PM bug #7676: Suchfunktionalität in Registration UI Dateneingabe
- Das Phänomen ist schlecht reproduzierbar.
Bevor ich das Ticket geschrieben habe, hatte ich mich als admin aus und wi... - 03:24 PM bug #7676 (Closed): Suchfunktionalität in Registration UI Dateneingabe
- Referenz lt. Datenbankausgabe:
Moestrup, Ø. & Calado, A.J., Dinophyceae.Süßwasserflora von Mitteleuropa, 6: [I]-IX, ... - 03:22 PM Revision 4bd6b5fc (cdmlib): ref #7674 Refactor RowWrapper
- - add sub classes fort specimen and taxon row wrapper
- add service methods - 02:52 PM Revision 6a776dc5 (cdmlib): ref #7674 Refactor RowWrapper
- - code cleanup
- 02:50 PM feature request #7675 (Rejected): Make columns with default values togglable
- Columns that have default values defined in a taxon description should have a function to toggle their visibility
- 02:47 PM feature request #7674 (Closed): Show taxon descriptions in character matrix editor
- There are two types of taxon descriptions:
1. description from literature
1. description for default values
Th... - 02:32 PM task #7673 (New): review ABCD import
- please review the ABCD import for alga terra new
- 02:22 PM bug #3535: Automatically update descriptive view if content changed
- please review
- 02:22 PM bug #3535 (Resolved): Automatically update descriptive view if content changed
- Applied in changeset commit:taxeditor|c799a32e590620a2719f8f4edfa30604d5a23306.
- 02:20 PM Revision c799a32e (taxeditor): fix #3535: update name editor after moving descriptions from one taxon to another taxon
- 02:16 PM Revision b1cce780 (taxeditor): Merge branch 'develop' into taxonDescription
- 02:15 PM Revision 3158af23 (taxeditor): Fix possible NPE
- 01:13 PM bug #7484 (Resolved): Protected titleCache handling not correct in Reference detail view
- Applied in changeset commit:taxeditor|0656435dc061bddf14ebdbdad6b3868f6e0f2eb3.
- 01:11 PM Revision 0656435d (taxeditor): fix #7484: fix correct colouring of fields for protected titlecache and abbrev titlecache
- 12:35 PM bug #7665: ConcurrentModificationException when closing Editor
- Patrick Plitzner wrote:
> Applied in changeset commit:taxeditor|c7b20ed3c866508182a3d5d1b44b57fc1244b6f8.
Not sur... - 12:25 PM bug #7665 (Resolved): ConcurrentModificationException when closing Editor
- Applied in changeset commit:taxeditor|c7b20ed3c866508182a3d5d1b44b57fc1244b6f8.
- 12:24 PM bug #7665: ConcurrentModificationException when closing Editor
- I could never reproduce this problem, so for reviewing we could just wait test for a while and see if it happens again.
- 11:30 AM bug #7665 (In Progress): ConcurrentModificationException when closing Editor
- use iterator.remove()
- 12:25 PM Revision c7b20ed3 (taxeditor): fix #7665 Use iterator to avoid ConcurrentModificationException
- 12:24 PM Revision 2bc033c4 (taxeditor): Remove unused method
- 12:21 PM bug #7352 (Closed): review propertyPaths in editor
- 12:07 PM feature request #6565 (Closed): [MASTER] Eclipse 4 Migration
- 12:05 PM feature request #6932 (Closed): Migrate bulk editor
- Close this ticket as bulk editor has new developments like NAT tables and parallel loading anyways.
- 12:01 PM bug #4465 (Worksforme): Handle Drag and Drop for Synonyms
- this issue is fixed, follow up ticket with remaining problems is #7671
- 11:59 AM bug #7064 (Closed): NameEditor remaining issues
- 11:56 AM bug #7064: NameEditor remaining issues
- Created new tickets for open issues
- 11:57 AM bug #7671 (New): Drag & Drop for synonyms has refresh problems
- when drag & drop synonym from an existing homotypic group or into an existing homotypic group the refresh of the name...
- 11:49 AM feature request #7670 (New): [DISCUSS] Do we need right click "save" menu
- ... or is icon + Str/S enough.
Ask users.
It was like this in Name Editor before e4. Either we should have it e... - 11:49 AM Revision f8019c2d (taxeditor): ref #7657 Consider taxon node filter when loading data
- 11:48 AM Revision aa5ef8d0 (cdmlib): ref #7657 code refactoring
- 11:34 AM feature request #7015 (New): Migrate recent menu item
- The recent menu should preferably show only recent items from the currently connected database
- 09:36 AM bug #7576 (Resolved): Set Publish Flag for Subtree Dialog - Problems with Progressmonitor
- The problem of lost connection between server and progress monitor dialog is fixed, the percentage display is fixed t...
- 08:42 AM feature request #7657 (Rejected): Use HQL query for loading character matrix
- issue should be handled in #7589
- 08:41 AM feature request #7589: Performance, UX and stability patches for CharacterMatrix
- commit:cdmlib|d9c066f5584fd689621509488a82c6649abb84d4
- 08:40 AM Revision d9c066f5 (cdmlib): ref #7657 Increase loading speed for matrix
08/21/2018
- 05:59 PM Revision ee6addb8 (cdmlib): ref #7657 Load description for matrix via HQL (still broken)
- 04:06 PM Revision 73e4daae (cdmlib): fix NPE in TypeDesignationSetManager.stringify(TypeDesignationSetManager.java:522)
- 03:41 PM bug #6850 (Feedback): NPE when clearing label of "kind of" term in TermEditor
- @Andreas: I could not reproduce this behavior. Maybe this was fixed a while ago. Can you please test and close this t...
- 03:29 PM bug #6742 (Feedback): IAE when using "Link with taxon selection" in Specimen-Editor
- @Andreas: I could not reproduce this behavior. Maybe this was fixed a while ago. Can you please test and close this t...
- 03:14 PM feature request #6475 (Resolved): Make specimen tree editor collapsable and expandable
- 03:13 PM Revision 5d8c225b (taxeditor): ref #6475 Make specimen tree editor collapsable and expandable
- 01:50 PM feature request #5021 (Rejected): TreeNodeDropAdapterAssistant should use RemotingMoveTaxonNodeHandler
- I think this is obsolete because the functionality is now in the service method which is used by both classes.
- 12:46 PM bug #4573 (Resolved): Handle duplicate username, group or grantedAuthority correctly
- please review
- 12:33 PM bug #4573: Handle duplicate username, group or grantedAuthority correctly
- now for users and groups there is a check for identical names and a message that the user/group already exists, pops up.
- 12:44 PM Revision bb5d8aed (taxeditor): ref #4573: handle duplicate grantedAuthority in editor
- 12:25 PM Revision 9122a3ce (taxeditor): ref #4573: handle duplicate user and group name in editor
- 11:25 AM bug #7638: problem with media data missing meta data
The media file above does not exist, clicking on the link results in:
Sorry, no connection ...
Sorry, no conn...- 09:46 AM bug #7145: NPE when trying to move a synonym into another homotypic group
- this exception appeared again for Sabine:
Hallo,
bei Sabulina afghanica kann ich das Synonym nicht von hetero- ... - 09:44 AM bug #7668 (Closed): NPE when changing author
- mail of Sabine:
Hallo,
beim Versuch bei der Art Arenaria brachypetala den Autor zu ändern (Auswahl eines andere... - 08:31 AM Revision 4133992a (cdmlib-apps): adapt AlgaTerraTypeImport to new specimen facade signature for kind-of-unit
- 08:30 AM Revision b557cf20 (cdmlib-apps): rename IAPT import test package (same name as import package itself)
- 08:29 AM Revision 5bfe953d (cdmlib-apps): ref #7664 adapt app-import to typified return types
- 08:05 AM bug #7606: compact display of CDM Point data
- Maybe we can leave it as an expandable element which is by default not expanded.
This allows to also show the deci...
08/20/2018
- 06:06 PM feature request #7666: Remaining issues for "Formatter and DTO for taxon relationships (e.g. misapplied names)"
- WGB: Der Buchlink verweist auf den Protolog von N. blancoi Blume – der hat ja aber gerade nichts mit dieser Namensanw...
- 11:59 AM feature request #7666 (In Progress): Remaining issues for "Formatter and DTO for taxon relationships (e.g. misapplied names)"
- copied from #6682
for requirements see #6682
* correct symbols for relationships in databases
* EN_DASH... - 05:40 PM feature request #6682: Formatter and DTO for taxon relationships (e.g. misapplied names)
- AM: … und noch etwas: bei der „sensu“ Referenz ist ja vermutlich die Jahreszahl bewusst weggelassen um es an die gäng...
- 05:30 PM feature request #6682: Formatter and DTO for taxon relationships (e.g. misapplied names)
- Sensu references and relation references should be formatted similarly:
WGB: Wenn die exakte Referenz über die Bib... - 12:00 PM feature request #6682 (Closed): Formatter and DTO for taxon relationships (e.g. misapplied names)
- close this ticket as released in 5.2, open issues moved to #7666
- 03:38 PM Revision 18983f12 (cdm-server): Add Releases link
- 02:20 PM bug #7528 (Duplicate): Allow changing the Registration status in the RegistrationWorkingsetEditor
- 02:18 PM feature request #7572 (Closed): SpecimenTypeDesignationEditor: Collection combobox shows collection.code and collection.institution
- Review: institutions as well as codes can be searched. Seem to work.
- 01:57 PM feature request #7611 (Closed): media types with media uris are clickable
- Es funktioniert (ist allerdings nicht besonders auffällig).
Beispiel in der Ausgabe http://test.e-taxonomy.eu/datapo... - 01:43 PM feature request #7569 (Closed): SpecimenTypeDesignationEditor: Typedesignations should be ordered
- Main usecases checked:
Holotype isotypes
Holotype paratypes
Type Epitype, Type lectotype
Order as requested, ti... - 01:39 PM bug #7667: NoHttpResponseException for large queries in bulk editor
- we should handle this with high priority as it may influence server performance
- 01:32 PM bug #7667 (Feedback): NoHttpResponseException for large queries in bulk editor
- Copied from #6321:
AM: "when testing a couple of times I got an EagerLoadingException caused by an NoHttpResponseE... - 01:35 PM bug #7557 (Closed): TaxonNamePopEditor: com.vaadin.data.Property$ReadOnlyException on saving a sub popup editor
- 01:33 PM bug #7629 (Closed): creating a typification only registration should not be possible if the names protologue is in the current workingset
- Tested and works.
- 01:32 PM feature request #6321 (Closed): Implement parallel loading + progress bar for loading objects into the bulk editor
- Andreas Müller wrote:
> Generally I wonder how to continue here. As mentioned I still get HTTPNoResponse issues on "... - 01:28 PM bug #7555: TaxonServiceImpl.findTaxaAndNames() broken for cichoriae searching for "Lapsana communis"
- Maybe it is related that for Nepenthes alata no specimen appear: http://caryophyllales.org/nepenthaceae/cdm_dataporta...
- 12:38 PM bug #7555 (Feedback): TaxonServiceImpl.findTaxaAndNames() broken for cichoriae searching for "Lapsana communis"
- The issue described in the description (as link) seems to be solved.
The 2 later links do return "Required UUID pa... - 01:27 PM feature request #7594: RegistrationWorkingsetEditor click on new serveral times
- Issue not resolved. May be a problem of the slow test server.
- 01:19 PM feature request #7643: cdmlight export: for bibliographic short citation use the freetext of the date as default
- As mentioned in #note-2 this implementation is critical. I left a note in #7644 to maybe revert once #7644 is impleme...
- 01:03 PM feature request #7643 (Closed): cdmlight export: for bibliographic short citation use the freetext of the date as default
- 01:13 PM Revision c88ae0d7 (cdmlib): fix NPE in CdmLightExport
- 01:11 PM bug #7566 (Closed): TeamOrPersonField: some Persons can not be selected
- 12:48 PM Revision 5c5d1f1f (cdmlib): ref #7666 adapt test for new doubtful handling in formatter
- 12:34 PM bug #7647 (Closed): accepted taxa also used as MAN or Pro Parte Synonym are displayed as MAN in details view
- The example was Nepenthes hispida and it is displayed correctly as accepted name now.
- 12:29 PM bug #7647 (Feedback): accepted taxa also used as MAN or Pro Parte Synonym are displayed as MAN in details view
- Katja, can you check with Walters example again in production. Unfortunately it is not mentioned in the ticket. If it...
- 11:52 AM Revision 2469bc9b (cdmlib): cleanup
- 11:52 AM Revision 9c8dc025 (cdmlib): ref #6682 split doubtful in rel doubtful and taxon doubtful + use full authorshipCache for MAN non-authors
- 10:34 AM feature request #7071 (New): Reenable restore functionality
- 10:11 AM bug #7665 (Closed): ConcurrentModificationException when closing Editor
- When closing editor a ConcurrentModificationException occurs:
~~~ text
login : w.berendsohn
editor version : 5.2... - 10:10 AM Revision 04e5e29a (taxeditor): minor refactoring
- 09:18 AM Revision adacf42f (taxeditor): Fix NPE for editing newly added feature nodes
08/17/2018
- 10:01 PM bug #7578: preseve null values in all mesurements during serialization of webservice responses
- Andreas Müller wrote:
> error radius still returns 0 in http://test.e-taxonomy.eu/cdmserver/cichorieae/occurrence/8e... - 03:14 PM bug #7578: preseve null values in all mesurements during serialization of webservice responses
- error radius still returns 0 in http://test.e-taxonomy.eu/cdmserver/cichorieae/occurrence/8eaf2ade-d478-4af6-b3df-bad...
- 02:09 PM bug #7578 (Closed): preseve null values in all mesurements during serialization of webservice responses
- works now!
- 12:50 PM bug #7578 (In Progress): preseve null values in all mesurements during serialization of webservice responses
- this seems to be not working as expected:
http://test.e-taxonomy.eu/cdmserver/cichorieae/occurrence/8eaf2ade-d478-... - 09:36 PM bug #7179: Phycobank: set protectedTitleCaches = 1 where Person contains no data
- correct!
- 04:24 PM bug #7179: Phycobank: set protectedTitleCaches = 1 where Person contains no data
- I guess this is only data related and therefore target version can be removed. Correct?
- 05:19 PM Revision 54ada1c3 (cdm-vaadin): ref #7664 adapt return type for many methods with defined typification
- 04:57 PM Revision 62cc2893 (taxeditor): cleanup
- 04:41 PM feature request #7071: Reenable restore functionality
- ??
- 04:23 PM feature request #7281: Implement bromelian import
- I guess this is only data related and therefore target version can be removed? Otherwise please add commit and revert...
- 04:14 PM Revision 2c34bd93 (taxeditor): Merge branch 'release/5.2.0' into develop
- 04:14 PM Revision 11b59612 (taxeditor): Merge branch 'release/5.2.0'
- 04:09 PM feature request #6682 (Resolved): Formatter and DTO for taxon relationships (e.g. misapplied names)
- 04:08 PM Revision 69c43289 (cdm-server): Merge branch 'release/5.2.0' into develop
- 04:08 PM Revision 83415cdc (cdm-server): jenkins merging release branch into master (strategy: theirs)
- 04:07 PM Revision a230cdfe (cdm-server): updating poms for branch'release/5.2.0' with non-snapshot versions
- 04:06 PM Revision c546187c (cdm-webapp): Merge branch 'release/5.2.0' into develop
- 04:06 PM Revision 4201e860 (cdm-webapp): jenkins merging release branch into master (strategy: theirs)
- 04:06 PM task #6986 (Rejected): 4 animalia lists available for RL
- Rejected as lists are not needed anymore.
- 04:06 PM Revision 2c37dba5 (cdm-webapp): updating poms for branch'release/5.2.0' with non-snapshot versions
- 04:06 PM Revision b3e90dcb (cdm-webapp): jenkins bumping cdmlib.version and cdm.vaadin.version to 5.2.0
- 04:06 PM Revision bd2c0c62 (cdm-dataportal): Merge branch 'release/5.2.0' into develop
- 04:06 PM Revision c8deffb3 (cdm-dataportal): updating poms for branch'release/5.2.0' with non-snapshot versions
- 04:05 PM Revision b05cbcac (cdm-dataportal): release-preparation: production level css
- 04:05 PM Revision 31c10aae (cdm-vaadin): Merge branch 'release/5.2.0' into develop
- 04:05 PM Revision 61fd59ad (cdm-vaadin): jenkins merging release branch into master (strategy: theirs)
- 04:02 PM Revision 9b6635b8 (cdm-vaadin): updating poms for branch'release/5.2.0' with non-snapshot versions
- 04:02 PM Revision c2e6c883 (cdm-vaadin): jenkins bumping cdmlib.version to 5.2.0
- 03:51 PM task #7596 (Resolved): PhycoBank Portal - Formatting
- 03:33 PM task #7527 (Closed): CdmEntityDaoBase.*ByParam() public and also available in the service layer
- Generally this looks ok. Only the return types should be specified explicitly. I created a new ticket as this is a ge...
- 03:31 PM Revision 98ce4a92 (cdmlib): ref #7664 adapt return type for many methods with defined typification
- 03:23 PM Revision b826b86c (cdmlib): Updating develop poms back to pre merge state
- 03:23 PM Revision 1c5a8870 (cdmlib): Merge branch 'master' into develop
- 03:23 PM Revision 4d987e05 (cdmlib): updating develop poms to master versions to avoid merge conflicts
- 03:23 PM Revision 2a5e027c (cdmlib): Merge branch 'release/5.2.0'
- 03:23 PM feature request #7664 (New): Use typified return types where possible
- 1. Many method of service layer and persistence use T as return type even if a more specific class is defined by para...
- 03:07 PM Revision 3da6827b (cdmlib): updating poms for branch'release/5.2.0' with non-snapshot versions
- 02:57 PM Revision 18b3dd0d (cdm-webapp): jenkins bumping cdmlib.version and cdm.vaadin.version to 5.2.0-SNAPSHOT
- 02:57 PM Revision 4c3d9f75 (cdm-webapp): updating poms for 5.3.0-SNAPSHOT development
- 02:57 PM Revision f4dcd669 (cdm-webapp): jenkins bumping cdmlib.version and cdm.vaadin.version to 5.3.0-SNAPSHOT
- 02:55 PM Revision f9062d6c (cdm-vaadin): jenkins bumping cdmlib.version to 5.2.0-SNAPSHOT
- 02:55 PM Revision 1fd3f2b5 (cdm-vaadin): updating poms for 5.3.0-SNAPSHOT development
- 02:55 PM Revision 771e5e60 (cdm-vaadin): jenkins bumping cdmlib.version to 5.3.0-SNAPSHOT
- 02:54 PM Revision 2ff641d8 (cdm-vaadin): avoiding symlinks to circumvent bug in jgitflow
- 02:41 PM Revision 22e26d8a (cdm-vaadin): jenkins bumping cdmlib.version to 5.3.0-SNAPSHOT
- 02:40 PM Revision 6a6f6267 (cdm-vaadin): ignoring env.properties
- 02:35 PM Revision 4d01989b (taxeditor): ref #7362 Show info when searching with <4 letters
- 02:20 PM Revision 4f2039f3 (taxeditor): Updated version in pom / project files to taxeditor version : 5.3.0-SNAPSHOT and cdmlib version : 5.3.0-SNAPSHOT
- 02:20 PM Revision 272802a9 (taxeditor): Updated version in pom / project files to taxeditor version : 5.2.0 and cdmlib version : 5.2.0
- 02:20 PM Revision 8a69db44 (cdm-vaadin): jenkins bumping cdmlib.version to 5.3.0-SNAPSHOT
- 02:20 PM Revision b1f1bc44 (cdm-server): updating poms for 5.3.0-SNAPSHOT development
- 02:20 PM Revision 735ffe43 (cdm-dataportal): updating poms for 5.3.0-SNAPSHOT development
- 02:17 PM Revision 07f30a67 (cdmlib): updating poms for 5.3.0-SNAPSHOT development
- 01:26 PM Revision 200979f6 (cdmlib): ref #7578 adding missing json config entry for the generic api
- 01:03 PM bug #7663 (New): drupal installations report Undefined index: distribution_name in drupal_install_profile_distribution_name()
- This is a known drupal issue https://www.drupal.org/project/drupal/issues/1971068
See also:
https://api.drup... - 12:30 PM bug #7361 (Closed): Consistent UI concept for create, new, add, remove, delete, edit buttons
- remaining improvements copied to #7662
- 12:28 PM feature request #7662 (New): Better icons for create, new, add row, remove row
Alternative icons for create, new, add row, remove row:
* use add row and remove icons like: : ref #7362 Show synonyms for term details
- 12:20 PM bug #7583 (Closed): NPE on logout in registration list view
- it's fixed
- 12:17 PM feature request #7590 (Closed): findByTitleWithRestrictions allows combining Restrictions by OR
- this feature obviously works as expected on the test-server since it is being used in cdm-vaadin and it is covered by...
- 12:16 PM task #7550 (Closed): Move UserHelper from cdm-vaadin into cdmlib
- no further problems
- 12:15 PM bug #7525 (Closed): IdentifiableServiceBase findByTitle(), and listByTitle() methods support cdm Restrictions and Criteria
- all criteria methods restored commit:024d9b21 and no further problems did popup during the past two months, so we can...
- 12:12 PM bug #7586 (Closed): com.vaadin.data.Property$ReadOnlyException on opening TypeSpecimenWorkingsetEditor
- did not occur again on the test-server since over 20days, so this is for sure solved
- 12:11 PM feature request #7571 (Closed): Collection editor has field to select and edit the institution
- 12:10 PM task #7562 (Closed): Specimen table "Associated with" taxon is irritating and needs to be removed, replaced
- Checked and ok
- 09:40 AM task #7562: Specimen table "Associated with" taxon is irritating and needs to be removed, replaced
- For reviewing check http://test.e-taxonomy.eu/dataportal/preview/campanulaceae/cdm_dataportal/taxon/cdcacbda-11c0-4c...
- 09:40 AM task #7562: Specimen table "Associated with" taxon is irritating and needs to be removed, replaced
- Hallo Norbert,
die Specimenseiten sind von dieser Änderung nicht betroffen: http://test.e-taxonomy.eu/dataportal/p... - 08:48 AM task #7562: Specimen table "Associated with" taxon is irritating and needs to be removed, replaced
- Hallo Andreas,
ich komm erst heute dazu, zu antworten.
Ich kann mich ehrlich gesagt nicht mehr daran erinnern... - 12:06 PM Revision a77d81cc (cdmlib): removing unused duplicate property PreservedSpecimenDTOs
- 11:53 AM Revision d68a30b0 (cdm-dataportal): using FielUnitDTO->derivates instead of ->preservedSpecimenDTOs to harmonize with cdmlib
- 11:51 AM Revision c902cfd4 (cdm-dataportal): merge develop into feature branch
- 11:38 AM Revision fe56d402 (cdmlib): fieldUnitDTO code cleaning
- 11:33 AM feature request #6321: Implement parallel loading + progress bar for loading objects into the bulk editor
- Generally I wonder how to continue here. As mentioned I still get HTTPNoResponse issues on "test" when running large ...
- 11:25 AM feature request #6321: Implement parallel loading + progress bar for loading objects into the bulk editor
- Patrick Plitzner wrote:
> Comment #6321#note-43: This is fixed
OK, this looks quite good. I think we can only i... - 11:18 AM feature request #6321: Implement parallel loading + progress bar for loading objects into the bulk editor
- Patrick Plitzner wrote:
> Comment #6321#note-40: I just added a delay of 500ms to wait for the previous job to finis... - 11:15 AM feature request #6321 (Feedback): Implement parallel loading + progress bar for loading objects into the bulk editor
- I still get exceptions related to NoHttpResponseException on test server. E.g. when running a first request for "*" o...
- 11:14 AM Revision 416bc78f (cdm-dataportal): use mediaDTO
- 11:08 AM feature request #7661 (New): Improve saving strategy for bulk editor
- Currently all records are reloaded. This creates problems especially with large lists.
We need a save strategy whi... - 11:00 AM feature request #7643: cdmlight export: for bibliographic short citation use the freetext of the date as default
- yes this is fixed.
- 10:53 AM feature request #7643: cdmlight export: for bibliographic short citation use the freetext of the date as default
- Andreas Müller wrote:
> This will throw an NPE if datePublished does not exist!!
Is this fixed??
- 10:53 AM Revision f5ac2db4 (cdmlib): removing merge conflict artifact from eclipse launcher
- 10:52 AM feature request #7518 (Closed): remaining issues for usage of NatTable for bulkeditor
- All issues are either fixed or moved to new ticket so we can close this one.
- 10:51 AM feature request #7518: remaining issues for usage of NatTable for bulkeditor
- Patrick Plitzner wrote:
> **better symbols for target/candidates of deduplication**: this could either be solved b... - 10:39 AM feature request #7518: remaining issues for usage of NatTable for bulkeditor
- Patrick Plitzner wrote:
>
> **However, the percentage does not yet depend on real content length**: I tried auto a... - 10:21 AM feature request #7518: remaining issues for usage of NatTable for bulkeditor
- Patrick Plitzner wrote:
> **possibility to copy from a cell content**: On linux the context menu does not exist at a... - 10:19 AM feature request #7518: remaining issues for usage of NatTable for bulkeditor
- Patrick Plitzner wrote:
> **colors look like in the 90th**: I used a little less neon colors but this is very subj... - 10:10 AM feature request #7518: remaining issues for usage of NatTable for bulkeditor
- Patrick Plitzner wrote:
> **once we have >3 columns we will need horizontal scrolling anyway**: horizontal scrolli... - 10:06 AM feature request #7518: remaining issues for usage of NatTable for bulkeditor
- Patrick Plitzner wrote:
> **size of the rows should not be 50/50, but depending on the content length (percentage ... - 10:50 AM Revision fdd2fa78 (cdmlib): cleaning merge problem info in comment
- 10:46 AM feature request #7660 (Closed): Indicate the row state in a NAT table via symbols
- This is needed for e.g. indicating that a row is a candidate for deduplication. For further discussion see #7518.
... - 10:44 AM Revision a7e45124 (cdmlib): code cleaning
- 10:43 AM Revision 806bd3b0 (taxeditor): ref #7362 Use pre-selected vocabulary when dragging terms
- 10:37 AM feature request #7659 (New): Implement algorithm to optimize initial column size in NAT tables
- If a NAT table has multiple columns the correct initial column size becomes important to avoid too much empty space a...
- 10:34 AM Revision 6b91c396 (cdmlib): fix getPreservedSpecimen in fieldUnitDTO
- 10:26 AM Revision aeb34234 (taxeditor): ref #7362 Add term vocabular combo
- 10:00 AM bug #7559 (Closed): possibly corrupted hiberante session after previous error on saving editor
- Done with commit:cdm-vaadin|51886e05
Closing ticket. - 09:51 AM bug #7559: possibly corrupted hiberante session after previous error on saving editor
- These problems did not occur since 30 days despite intensive usage of the test system, therefore we can be pretty sur...
- 09:58 AM Revision 51886e05 (cdm-vaadin): ref #7559 removing commented code which also includes old conversationHolder stuff
- 09:44 AM bug #6563 (Closed): Display altitude, distance to Ground and watersurface correct handling of freetext
- Works for the examples given in this issue.
- 09:27 AM bug #7531 (Closed): PermissionDeniedException on flushing registration with modified status even if the user has the required authority
- Very beautiful code ;-), I think we can close this ticket.
- 07:31 AM Revision 34d7fab8 (cdmlib): Add source of type aggregation to description
- 07:31 AM Revision e93e2265 (cdmlib): Fix LazyInitializationException
08/16/2018
- 07:09 PM Revision a9c1e5d6 (cdmlib): ref #6682 types for both directions
- 06:47 PM Revision ef5174f6 (cdmlib): ref #6682 try to fix failing query in TaxonDao
- 06:15 PM Revision 5576f79c (cdmlib): ref #6682 try to fix failing query in TaxonDao
- 06:09 PM Revision 1e1d5695 (cdmlib): ref #6682 revert relType DTO
- 06:03 PM Revision 1fc33b39 (cdmlib): ref #6682 add types and deduplicateMisapplications parameter to web service
- 05:53 PM Revision a089c5d4 (cdmlib): ref #6682 add types and deduplicateMisapplications parameter to web service
- 05:12 PM Revision 78614c1a (cdmlib): ref #6682 add typeUuid and try to fix missing type issue
- 04:33 PM bug #7638 (Feedback): problem with media data missing meta data
- Size is empty now, but heigth and width is still 0. Is this wanted or did you forget to handle them similarly?
- 04:29 PM bug #7647: accepted taxa also used as MAN or Pro Parte Synonym are displayed as MAN in details view
- A first check looks fine, but I would like to check again with Walters example after release before finally closing t...
- 04:15 PM Revision 4e6e568a (cdmlib): ref #6682 fix misapplication deduplication issues
- 03:43 PM Revision 2fa5cd44 (taxeditor): Allow only exact values xOR aggregated values in cell editor
- 03:42 PM Revision 5e627e56 (taxeditor): Fix setting of feature type
- 03:21 PM Revision 1038e9fe (taxeditor): Fix NPE
- 03:16 PM Revision 576743e2 (cdmlib): ref #6682 include doubtful
- 02:35 PM feature request #7658 (Closed): use new taxon relationship DTO webservice in portal
- for details see #6682
Example taxa:
* Chichorieae: Pilosella acutifolia coll.
* Cihochorieae: Hieracium dermop... - 02:33 PM bug #7243 (Duplicate): sometimes the context menu in name editor does not work anymore
- 01:55 PM Revision 8b98d482 (cdmlib): ref #6682 use TaggedTextBuilder
- 12:59 PM Revision 8a17aa3e (cdmlib): ref #6682 further fixes for taxon relationship formatting - remove sensu tags, include Invalid Designation, use ordinary term for type
- 12:53 PM Revision 3c998621 (taxeditor): Make specimen selection dialog horizontally scrollable
- 12:17 PM Revision d6c56cdc (cdmlib): ref #6682 further fixes for taxon relationship formatting - fix referenced entity issues
- 12:10 PM Revision fcbac3e6 (taxeditor): Show possible exception in dialog
- 12:07 PM feature request #7657 (Rejected): Use HQL query for loading character matrix
- 11:43 AM Revision a81acd75 (cdmlib): revert commit ff21181c
- 11:39 AM Revision 6f78f667 (cdmlib): deproxy of entities in TaggedTextBuilder
- 10:14 AM bug #7641: Reference editor: Error when incerting several new authors into a new author team
- 
 - 08:52 AM Revision b3fb4578 (taxeditor): adapt editor to change getFieldUnitForGatheringEvent to findFieldUnitForGatheringEvent
- 08:48 AM Revision 90ec321a (cdmlib): ref #6682 further fixes for taxon relationship formatting - relsec and authors
- 08:18 AM Revision 81502ddd (cdmlib): ref #6682 further fixes for taxon relationship service - better separators
- 12:49 AM Revision 82eb3374 (cdmlib): ref #6682 further fixes for taxon relationship service
- 12:05 AM Revision d7909683 (cdmlib): ref #6682 further fixes for taxon relationship service
08/15/2018
- 10:14 PM Revision 977a388a (cdmlib): ref #6682 fix directions for taxonRelationship service
- 10:07 PM Revision 973082b3 (cdmlib): ref #6682 further fixes for taxonRelationship service
- 09:13 PM Revision 1fab5922 (cdmlib): ref #6682 some changes to test taxon relationship service
- 08:16 PM Revision c6a7335e (cdmlib): ref #6682 adapt inverse MAN symbol in test
- 08:12 PM bug #7656 (Duplicate): Adapt inverse symbol for MisappliedName relationship type
- this is required for #6682
still need update script here - 08:10 PM Revision d50a2175 (cdmlib): ref #6682 adapt taxon rel type symbols in test in for MAN inverse type
- 07:30 PM Revision 33852ad0 (cdmlib): ref #6682 first implementation of taxon relationship formatter and web service
- 05:49 PM Revision a186543e (taxeditor): ref #7518 Pre-load and select previously selected element
- 05:47 PM Revision ed983c96 (cdmlib): ref #7492 handled unpublished in NameCatalogueController.doGetTaxonInformation
- 05:06 PM Revision 6959d272 (taxeditor): Fix possible NPE
- 04:56 PM Revision 938551ac (cdmlib): cleanup
- 04:56 PM Revision 6d921b88 (cdmlib): fix non compiling code in CommonServiceImpl (works on other installations but not on mine)
- 04:56 PM Revision 93cd99ee (cdmlib): fix row count issue for CsvImportBase
- 04:56 PM Revision 3994e588 (cdmlib): cleanup
- 03:38 PM feature request #7518 (Resolved): remaining issues for usage of NatTable for bulkeditor
- 03:31 PM feature request #7518: remaining issues for usage of NatTable for bulkeditor
- ~~**possibility to copy from a cell content**: On linux the context menu does not exist at all but CTRL+C works. I th...
- 03:37 PM Revision 596ef595 (taxeditor): ref #7518 Fix colums sizes -> show horizontal scrollbars
- 03:20 PM Revision e229bf65 (taxeditor): adapt taxeditor to changes in DerivedUnitFacade
- 03:20 PM Revision a160d195 (taxeditor): do not allow to add NameDescriptions in bulkeditor
- 03:18 PM Revision ec35f482 (taxeditor): ref #7518 Soften colors for deduplication
- 03:02 PM Revision 16a514f4 (taxeditor): ref #7518 Reduce size of index column
- 02:40 PM Revision 737c3638 (cdmlib): adapt occurrence search to changes in derivedUnitFacade
- 02:37 PM Revision 5a65460f (cdmlib): adapt cdm light test
- 02:22 PM Revision c17ca5af (cdmlib): fix NPE in cdm light export
- 02:04 PM Revision 745fac28 (cdmlib): Merge branch 'develop' of ssh://dev.e-taxonomy.eu/var/git/cdmlib into develop
- 01:51 PM Revision 544dc46c (taxeditor): Fix exception label for URI text elements
- 01:44 PM Revision 55f7ad0e (cdmlib): minor
- 01:38 PM Revision e2ba0554 (cdmlib): minor
- 01:18 PM Revision 2201d866 (cdmlib): adapt abcd import to changes in derivedUnitFacade
- 01:17 PM Revision 7d2bfaed (cdmlib): fix test for getKindOfUnit
- 01:00 PM Revision 4047c748 (cdmlib): adapt test for cdm light to last changes
- 12:52 PM Revision c6716d5c (cdmlib): Merge branch 'feature/specimenPortal' into develop
- 12:52 PM Revision 10b00df8 (cdmlib): derivedUnitFacade should not give back the kindOfUnit for the fieldUnit only but for the derived unit
- 12:51 PM Revision 6492ba96 (cdmlib): adapt sec ref title with datePublished freeText
- 12:23 PM feature request #6321 (Resolved): Implement parallel loading + progress bar for loading objects into the bulk editor
- 09:54 AM feature request #6321: Implement parallel loading + progress bar for loading objects into the bulk editor
- Comment #6321#note-40: I just added a delay of 500ms to wait for the previous job to finish. Waiting explicitily is v...
- 12:16 PM bug #7641: Reference editor: Error when incerting several new authors into a new author team
- All new authors, except the last one are not saved = they can not be selected.
- 12:06 PM bug #7641: Reference editor: Error when incerting several new authors into a new author team
- http://test.e-taxonomy.eu/cdmserver/phycobank_production/app/registration#!workingset/1c70fa46-c7a5-43e7-922a-379b200...
- 11:44 AM bug #7641: Reference editor: Error when incerting several new authors into a new author team
- 2018-08-15
Documentation http://test.e-taxonomy.eu/cdmserver/phycobank_production/app/registration#!workingset/8be1a... - 11:33 AM Revision 4315c73d (cdmlib): adapt authorship string ion cdmlight
- 11:10 AM Revision cef17ca3 (cdmlib): Increase version number of site skin project
- 10:05 AM Revision c31ff29d (cdmlib): kindOfUnit for all derivates not only for field units
- 10:03 AM Revision 23daf51d (taxeditor): Fix releases link
- 10:02 AM Revision e288ba50 (cdmlib): Fix releases link
- 09:13 AM feature request #7653: [DISCUSS] Delete NameFacts => Result: no
- WGB:
richtig wichtig erscheint mir vor allem die Sache mit den Typen. Aber für alle Fälle gilt, dass man das vorlä...
08/14/2018
- 09:22 PM Revision 66e51de3 (taxeditor): ref #6321 Load asynchronously loaded entities into main session
- 09:22 PM Revision 88ef5f8b (taxeditor): ref #6321 Wait for previous search to finish
- 09:22 PM Revision 970a5512 (taxeditor): Change label of feature tree widget for descriptive date set editor
- 09:22 PM Revision a433aeeb (taxeditor): Allow either categorical xor quantitative data for characters
- 06:54 PM feature request #7655 (Duplicate): References Editor: book section offers title field
- References Editor: A book section does not provide a title field, yet.
External users might miss this.
Workaround... - 06:51 PM feature request #7654 (Duplicate): New registration page existing publications combobox does 'begins with search' on author names
- The search on bibliographic authors is a full text search.
Example "Lange-Bert" (see screen shot) is searching for t... - 04:41 PM feature request #7648: Create taxonrelation to genus or species when subordinate names are created
- Also after import of new higher classifications we need to attache subgeneric taxa to their according taxa in bulk.
... - 04:38 PM feature request #7648: Create taxonrelation to genus or species when subordinate names are created
- Andreas Kohlbecker wrote:
> When creating a species a new Taxon needs to be created for this species and the new tax... - 04:26 PM feature request #7653: [DISCUSS] Delete NameFacts => Result: no
- WGB:
ich sehe da eine Reihe von Anwendungen für Namens-bezogene Fakten:
* ~~Etymologie – ist ganz allgemein wie ein... - 10:25 AM feature request #7653: [DISCUSS] Delete NameFacts => Result: no
- AM:
upps, das ist mir vollständig neu, dass für Namen über den Bulkeditor auch (Name-)facts editiert werden können... - 10:23 AM feature request #7653 (Closed): [DISCUSS] Delete NameFacts => Result: no
- NameFacts are currently very rarely used except for protologues. Protologues will be handled with nomenclatural sourc...
- 04:00 PM Revision 012d4a65 (taxeditor): Revert "ref #6321 Wait for canceled search to finish before starting new search"
- This reverts commit 36ee2736a960471161a354379845f770027286c4.
- 03:07 PM Revision 203a0b07 (cdm-server): Update CI link
- 03:04 PM Revision 696940b9 (taxeditor): Fix broken releases link
- 03:02 PM Revision b1f5279e (taxeditor): Update developers information
- 02:56 PM Revision f8b62135 (cdmlib): Remove broken link
- 10:21 AM Revision 135547e5 (cdmlib): Merge branch 'develop' into feature/specimenPortal
- 10:21 AM Revision 545f8115 (cdmlib): smaller changes on specimenDTOs
- 10:17 AM Revision 276f39f6 (cdm-dataportal): add the treeview as third variant for the specimen page
- 09:49 AM feature request #7281 (Closed): Implement bromelian import
- 09:46 AM bug #7638 (Resolved): problem with media data missing meta data
- 09:42 AM bug #7614 (Closed): IndexOutOfBoundsException after deleting in bulkeditor
- works fine now and the code seems to be correct.
- 09:12 AM feature request #7652 (New): add possibility to delete only the taxon node and keep the taxon in taxon navigator
- 12:52 AM Revision 8648170e (cdmlib): ref #7651 #7622 using nameService instead of CdmRepository to avoid bean factory problems
08/13/2018
- 11:38 PM Revision 0faf24b5 (cdmlib): ref #7651 #7622 relaxing requirement for an available registration minter
- 11:02 PM task #7651 (New): RegistrationManager implemented
- The commit:6ed17427 which was made for #7622 contains business logic which was placed in the RegistrationService for ...
- 10:57 PM task #7650 (New): RegistrationFactory implemented
- The commit:6ed17427 which was made for #7622 contains factory methods (at least one) which were placed in the Registr...
- 10:53 PM Revision 148bdb5b (cdmlib): ref #7622 addTypeDesignation() to receive registration uuids instead of objects
- 10:51 PM Revision 6f1b1416 (cdm-vaadin): ref #7622 simplyfying code be replacing targetRegistration for type designations by map for popupeditors and reg uuids
- 07:32 PM Revision dd3f7f9d (cdm-vaadin): ref #7622 persisting new registrations only when typeDesignations have been added
- 07:30 PM Revision 6ed17427 (cdmlib): ref #7622 preliminarily moving all registration management methods fom cdm-vaadin into the RegistrationService - needs further refactoring
- 07:21 PM bug #7622: RegistrationWorkingsetEditor: navigating to other pages with fresh registrations leaves empty registrations in the system
- Updating the subject to better reflect the cause
- 05:21 PM feature request #6682: Formatter and DTO for taxon relationships (e.g. misapplied names)
- This should rather be a formatter for concept relations and a new DTO service in remote.
- 04:34 PM bug #7649 (Closed): Term editor loads/saves extremely slow
- Walter:
"Der Term Editor braucht extrem lange, um aufzugehen – macht nichts, aber könnte ja sein, dass da etwas n... - 04:31 PM feature request #6321: Implement parallel loading + progress bar for loading objects into the bulk editor
- Patrick Plitzner wrote:
> Andreas Müller wrote:
> > when testing a couple of times I got an EagerLoadingException c... - 04:20 PM feature request #6321: Implement parallel loading + progress bar for loading objects into the bulk editor
- Andreas Müller wrote:
> when testing a couple of times I got an EagerLoadingException caused by an NoHttpResponseExc... - 03:26 PM feature request #6321: Implement parallel loading + progress bar for loading objects into the bulk editor
- Andreas Müller wrote:
> When running a search and stopping it by running a new search the results of the first searc... - 04:30 PM bug #7614 (Resolved): IndexOutOfBoundsException after deleting in bulkeditor
- 04:29 PM bug #7614: IndexOutOfBoundsException after deleting in bulkeditor
- There are cases when -1 is returned as the current row index. This is now caught before getting the element at the in...
- 04:05 PM bug #7555: TaxonServiceImpl.findTaxaAndNames() broken for cichoriae searching for "Lapsana communis"
- Also an issue for Nepenthes ampullaria
http://caryophyllales.org/nepenthaceae/cdm_api/proxy/http%253A%252F%252Fap... - 01:33 PM bug #7555 (Resolved): TaxonServiceImpl.findTaxaAndNames() broken for cichoriae searching for "Lapsana communis"
- please review
- 01:32 PM bug #7555: TaxonServiceImpl.findTaxaAndNames() broken for cichoriae searching for "Lapsana communis"
- fixed in commit:0d70754
- 01:29 PM bug #7555: TaxonServiceImpl.findTaxaAndNames() broken for cichoriae searching for "Lapsana communis"
- also reported by walter
http://caryophyllales.org/nepenthaceae/cdm_api/proxy/http%253A%252F%252Fapi.cybertaxono... - 03:26 PM Revision 36ee2736 (taxeditor): ref #6321 Wait for canceled search to finish before starting new search
- 03:20 PM feature request #7648 (Resolved): Create taxonrelation to genus or species when subordinate names are created
- When creating a species a new Taxon needs to be created for this species and the new taxon needs to be related to the...
- 03:00 PM Revision a8d014b2 (cdm-server): Fix link to installation site
- 02:28 PM feature request #7506 (Duplicate): Allow direct editing bulk editor
- 02:27 PM feature request #7518: remaining issues for usage of NatTable for bulkeditor
- Andreas Müller wrote:
> The following comment was missing when the ticket was copied from #7439: "Additionally offer... - 01:17 PM feature request #4383: multiple issues with de-duplication of references in bibliography
- Same or similar problem reported by Walter:
bei http://caryophyllales.org/nepenthaceae/cdm_dataportal/taxon/463255... - 01:09 PM task #3249 (Duplicate): [DISCUSS] Free text search for specimen details
- this seems like a duplicate of #3223
The requirement details given in this issue are very campanula secific and co... - 01:04 PM bug #7645 (Closed): specimen admin preferences are not saved
- works now
- 09:53 AM bug #7645: specimen admin preferences are not saved
- Applied in changeset commit:taxeditor|3935afdf45ef9ddc44850fab61cf53ba79125643.
- 09:45 AM bug #7645 (Resolved): specimen admin preferences are not saved
- 09:13 AM bug #7645 (Closed): specimen admin preferences are not saved
- The specimen admin preferences are not in the database after clicking apply or OK.
- 01:03 PM bug #7647 (Resolved): accepted taxa also used as MAN or Pro Parte Synonym are displayed as MAN in details view
- 01:02 PM bug #7647 (Closed): accepted taxa also used as MAN or Pro Parte Synonym are displayed as MAN in details view
- 12:47 PM bug #6289: “Back to images” link as “Back to taxon page” when in table-less mode
- Fixing this should be easy and quickly.
- 12:41 PM Revision 7c4fcd5c (taxeditor): fix missing label for feature in description element details view
- 12:31 PM Revision a316f71d (taxeditor): accepted taxon which is also used as MAN should be displayed correctly
- 11:58 AM feature request #6677: Add "hort." flag to Botanical names
- AM:
ok, das heißt, hort. könnte eigentlich an allen 4 Stellen stehen (Kombinations- und Ex-Author, sowie auch als ... - 11:51 AM feature request #6677: Add "hort." flag to Botanical names
- WGB:
im Stearn (4ed, 355) wird die Abkürzung „hort.“ als „hortorum, of gardens; hortulanorum, of gardeners“ defini... - 10:43 AM feature request #6677: Add "hort." flag to Botanical names
- AM:
Hallo Walter,
ich glaube im Zuge des Nepenthes Imports bin ich irgendwann mal auf die Abkürzung „hort.“ ges... - 10:38 AM feature request #7646 (Closed): Implement parser and formatter for "hort."
- as soon as #6677 is implemented
- 09:51 AM feature request #7419 (Closed): Provide example NormalImplicit import file for phycobank higher taxon graph imports
- I think we can close this ticket.
- 09:30 AM feature request #7419: Provide example NormalImplicit import file for phycobank higher taxon graph imports
- Why did you pass this issue to me? From reading the comments I got the impression that this issue is completed. I thi...
- 09:18 AM Revision 240ff660 (taxeditor): fix #7645: get the correct values from db for specimen admin preference page
- 09:17 AM Revision 3935afdf (taxeditor): fix #7645: get the correct values from db for specimen admin preference page
08/10/2018
- 09:41 PM feature request #6321: Implement parallel loading + progress bar for loading objects into the bulk editor
- Also got an NPE when deleting (and saving the delete) of a Reference. Maybe this is also related to parallel loading?...
- 09:21 PM feature request #6321: Implement parallel loading + progress bar for loading objects into the bulk editor
- Reloading after save and setting selection after save if selection is one of the later records in a huge dataset is s...
- 09:17 PM feature request #6321: Implement parallel loading + progress bar for loading objects into the bulk editor
- In name bulk editor changing e.g. specific epithet does NOT change the labels for "Name" and "Scientific name" and al...
- 09:07 PM feature request #6321: Implement parallel loading + progress bar for loading objects into the bulk editor
- when testing a couple of times I got an EagerLoadingException caused by an NoHttpResponseException. May the test serv...
- 08:33 PM feature request #6321 (Feedback): Implement parallel loading + progress bar for loading objects into the bulk editor
- When running a search and stopping it by running a new search the results of the first search are still (partly) avai...
- 08:18 PM feature request #7429 (Closed): Improve parsing and formatting for VerbatimTimePeriod
- 08:11 PM feature request #7506 (Feedback): Allow direct editing bulk editor
- To me this seems to be a duplicate for #7503. Can you please double check and if you agree close ticket as duplicate ...
- 08:01 PM feature request #7518: remaining issues for usage of NatTable for bulkeditor
- The following comment was missing when the ticket was copied from #7439: "Additionally offering tooltips saying that ...
- 07:56 PM feature request #7518: remaining issues for usage of NatTable for bulkeditor
- By the way, once we have >3 columns we will need horizontal scrolling anyway. So maybe this can already be implemente...
- 07:49 PM feature request #7518 (Feedback): remaining issues for usage of NatTable for bulkeditor
- * possibility to copy from a cell content
* this works now except for the fact that in editing mode the right cli... - 07:27 PM bug #7544 (Closed): Dragging a misapplication onto itself throws an exception in name editor
- Disabling d&d seems to work. Advanced features copied to #7609 so we can close this ticket.
- 07:15 PM bug #7603 (Closed): Changing a user group does not work as expected
- As far as I understand the ticket this is fully fixed.
- 02:27 PM task #7420: Import for higher taxon graph for phycobank
- Andreas Müller wrote:
> What should be done with existing IAPT data. Should they be adapted to the new data model?
... - 02:23 PM task #7420: Import for higher taxon graph for phycobank
- What should be done with existing IAPT data. Should they be adapted to the new data model?
- 02:07 PM task #7420 (In Progress): Import for higher taxon graph for phycobank
- First version of import is ready and tested with Frey and WoRMS data running into empty local database.
Next step:... - 02:05 PM Revision 40f4f84c (cdmlib-apps): minor
- 02:05 PM Revision cc9428e1 (cdmlib-apps): ref #7420 first version of phycobank higher classification import
- 02:03 PM feature request #7419 (Resolved): Provide example NormalImplicit import file for phycobank higher taxon graph imports
- Wolf-Henning Kusber wrote:
> prefered: use a single excel sheet per classification
great, makes it easier - 12:31 PM Revision d3f77ada (cdm-dataportal): minor
- 10:12 AM Revision 7965ef92 (cdm-dataportal): add item list to table resolves the problem of rendering the description items
08/09/2018
- 01:09 PM feature request #7419: Provide example NormalImplicit import file for phycobank higher taxon graph imports
- prefered: use a single excel sheet per classification
- 01:02 PM feature request #7419 (Feedback): Provide example NormalImplicit import file for phycobank higher taxon graph imports
- There seems to be an open issue: As we decided to create a classification for each reference and create a new taxon p...
- 11:10 AM feature request #7419 (Resolved): Provide example NormalImplicit import file for phycobank higher taxon graph imports
- As we have decided on the format and an example file exists as attachement to #7420 I think we can close this ticket.
- 11:07 AM feature request #7643 (Feedback): cdmlight export: for bibliographic short citation use the freetext of the date as default
- 11:07 AM feature request #7643: cdmlight export: for bibliographic short citation use the freetext of the date as default
- This will throw an NPE if datePublished does not exist!!
Also it is a bit dangerous as freetext in some cases may ... - 10:20 AM feature request #7643 (Resolved): cdmlight export: for bibliographic short citation use the freetext of the date as default
- 10:19 AM feature request #7643 (Closed): cdmlight export: for bibliographic short citation use the freetext of the date as default
- mail of WB:
noch ein Problemchen mit dem Output:
Nepenthes Datenbank – Da habe ich die folgende Referenz:
sieh... - 11:03 AM feature request #7644 (Closed): Add "continued" flag to (Verbatim)Timeperiod
- ... to indicate that a reference (usually a database) is continously edited and has no end date (yet).
E.g. Berend... - 10:44 AM task #7420: Import for higher taxon graph for phycobank
- Please save future versions of the excel file in the current .xslx format, .xls is outdated.
- 10:19 AM Revision ad53bf18 (cdmlib): ref #7643: use freetext for bibliographic short citation
- 01:22 AM feature request #7640: Update ISO country names where necessary
- This is not related to vaadin but a general cdm issue.
There are a couple of issues related to ISO 3166, many of t...
08/08/2018
- 05:24 PM feature request #7642 (Rejected): PhycoBank Anzeige und Zugreifbarkeit von Basionymen in Vaadin (zur Diskussion)
- 100233
Für die Eingabe einer Umkomination musste ich die Literatur für das Basionym anlegen, um das Basionym einzuge... - 03:47 PM feature request #7549 (Closed): Show tooltip for data aggregation in character matrix
- 03:39 PM feature request #7637 (In Progress): Handle intext references in CDM light
- 02:57 PM feature request #7637: Handle intext references in CDM light
- the filter is implemented and is the default, with the configurator it is possible to configure, that needs to be imp...
- 02:28 PM feature request #7637 (In Progress): Handle intext references in CDM light
- During cdm light export we may want to handle intext references correctly.
As a first step we simply should remove... - 03:32 PM bug #7639: SpecimenTypeDesignationEditor: Altitude not saved and displayed properly
- Only the verbatim field functions, see 100123
- 02:52 PM bug #7639 (Closed): SpecimenTypeDesignationEditor: Altitude not saved and displayed properly
- Registration: 100118 ff.
Altitude: Input 1618
Save-> Display in Vaadin =1
Altitude: Input 1618, than klick int... - 03:30 PM bug #7641 (Closed): Reference editor: Error when incerting several new authors into a new author team
- Collection team:
A collection team was built with new members as
Owsianny, P.M., Marciniak G. & Trawiński, K... - 02:59 PM feature request #7640 (Closed): Update ISO country names where necessary
- Some of the currently used long labels are outdated. E.g. "Poland, Peoples Republic of" is now "Poland, Republic of"....
- 02:54 PM bug #7638: problem with media data missing meta data
- now the size is not set to 0 if an exception appears because of missing metadata.
- 02:41 PM bug #7638: problem with media data missing meta data
- the original exception is:
~~~
java.io.IOException: Could not read block (block start: 504, block length: 4245350... - 02:39 PM bug #7638 (Resolved): problem with media data missing meta data
- media imported via biocase sometimes do not show size and metadata and or exception "file not found"
AM:
Bei de... - 02:51 PM Revision 633a72e4 (cdmlib): do not throw an exception if metadata could not be loaded
- 02:51 PM Revision 2d006ce7 (cdmlib): filter intext references in cdmlight export
- 02:49 PM Revision c80855f5 (taxeditor): do not set size etc to 0 if loading meta data fails
- 01:43 PM Revision 2d49766c (taxeditor): ref #7597 Use LongRunningTaskService for taxon aggregation
- 01:42 PM Revision 0f14b608 (cdmlib): ref #7597 Use LongRunningTaskService for taxon aggregation
- 12:58 PM feature request #6486: Implement handling of IntextReferences in dataportal
- I just see that we do have types for cdm:reference and cdm:source. Probably the later one is usually better as it rep...
- 09:41 AM Revision 3a45849e (taxeditor): ref #7549 Add fallback tooltip
- 09:41 AM Revision b5fcefe6 (taxeditor): catch possible widget is exposed exception
- 09:03 AM task #7636 (Closed): remove obsolete code which dissociates removed TypeDesignations from Registrations
- `SpecimenTypeDesignationWorkingsetEditorPresenter.saveBean()` contains code which is no longer needed since #7077 is ...
08/07/2018
- 06:40 PM Revision 0ceb2225 (cdmlib): ref #7597 Change label of aggregated taxon description
- 06:03 PM Revision dc45cce3 (cdmlib): ref #7597 Fix row wrapper creation for direct description children
- 04:52 PM Revision 02d5b1b7 (cdmlib): ref #7597 Fix potential exception for multiple associated taxa
- 04:52 PM Revision 3b3f3609 (cdmlib): ref #7597 Use remote progress monitor for taxon aggregation
- 04:52 PM Revision bd95f27d (cdmlib): ref #7597 Fix multi rep exception
- 04:52 PM Revision a40b31c1 (cdmlib): ref #7597 Extend compare wrapper to support all statistical measures
- 04:52 PM Revision 1210623a (cdmlib): ref #7597 Set taxon as cdm entity of update result
- 04:52 PM Revision d1238e5b (cdmlib): ref #7597 Implement taxon description aggregation
- 04:52 PM Revision 785b88aa (taxeditor): ref #7597 Adapt to service method changes
- 04:07 PM feature request #6321: Implement parallel loading + progress bar for loading objects into the bulk editor
- I just reactivated and tested a bit. I made some small changes I think.
- 03:44 PM feature request #6321: Implement parallel loading + progress bar for loading objects into the bulk editor
- Did you change anything or did you simply reactivate?
- 04:00 PM Revision 6328ed42 (taxeditor): ref #7597 Use remote progress monitor for taxon aggregation
- 03:37 PM Revision 4bbec44a (cdmlib): cleanup
- 03:22 PM Revision c233acf5 (cdmlib): use MediaDTO in DerivateDTO
- 03:01 PM Revision a692a96b (cdmlib): Merge branch 'develop' into feature/specimenPortal
- 03:01 PM Revision 77993547 (cdmlib): smaller changes in SpecimenDTOs
- 02:46 PM Revision 267da0d1 (cdm-dataportal): create an item_list for specimen page
- 10:25 AM bug #7635 (New): ObjectNotFoundException during delete of synonym and name
- ~~~
login : w.berendsohn
editor version : 5.1.2
server : api.cybertaxonomy.org (cybertaxonomy.org) / caryo_nep... - 10:24 AM bug #7634 (New): Timeout/Performance problems in Taxeditor
- Walter
"ich bekomme (hier zuhause, eigentlich ein ganz guter Anschluss) ab und zu die untenstehende Fehlermeldung,... - 10:22 AM bug #7633 (New): MySQLIntegrityConstraintViolationException - Duplicate entry during fact editing
- Walter:
"ich habe 2 Notes zusammengefasst und da noch ein bisschen korrigiert, gab u.a. Meldung, ich glaube schon,... - 10:20 AM bug #7632 (New): NullPointerException in EditFromSelectionWizard
- Walter:
"ich habe im Bulk Editor eine existierende Generic Referenz mit der korrekten Book Section Referenz (war s...
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