Activity
From 07/18/2018 to 08/16/2018
08/16/2018
- 07:09 PM Revision a9c1e5d6 (cdmlib): ref #6682 types for both directions
- 06:47 PM Revision ef5174f6 (cdmlib): ref #6682 try to fix failing query in TaxonDao
- 06:15 PM Revision 5576f79c (cdmlib): ref #6682 try to fix failing query in TaxonDao
- 06:09 PM Revision 1e1d5695 (cdmlib): ref #6682 revert relType DTO
- 06:03 PM Revision 1fc33b39 (cdmlib): ref #6682 add types and deduplicateMisapplications parameter to web service
- 05:53 PM Revision a089c5d4 (cdmlib): ref #6682 add types and deduplicateMisapplications parameter to web service
- 05:12 PM Revision 78614c1a (cdmlib): ref #6682 add typeUuid and try to fix missing type issue
- 04:33 PM bug #7638 (Feedback): problem with media data missing meta data
- Size is empty now, but heigth and width is still 0. Is this wanted or did you forget to handle them similarly?
- 04:29 PM bug #7647: accepted taxa also used as MAN or Pro Parte Synonym are displayed as MAN in details view
- A first check looks fine, but I would like to check again with Walters example after release before finally closing t...
- 04:15 PM Revision 4e6e568a (cdmlib): ref #6682 fix misapplication deduplication issues
- 03:43 PM Revision 2fa5cd44 (taxeditor): Allow only exact values xOR aggregated values in cell editor
- 03:42 PM Revision 5e627e56 (taxeditor): Fix setting of feature type
- 03:21 PM Revision 1038e9fe (taxeditor): Fix NPE
- 03:16 PM Revision 576743e2 (cdmlib): ref #6682 include doubtful
- 02:35 PM feature request #7658 (Closed): use new taxon relationship DTO webservice in portal
- for details see #6682
Example taxa:
* Chichorieae: Pilosella acutifolia coll.
* Cihochorieae: Hieracium dermop... - 02:33 PM bug #7243 (Duplicate): sometimes the context menu in name editor does not work anymore
- 01:55 PM Revision 8b98d482 (cdmlib): ref #6682 use TaggedTextBuilder
- 12:59 PM Revision 8a17aa3e (cdmlib): ref #6682 further fixes for taxon relationship formatting - remove sensu tags, include Invalid Designation, use ordinary term for type
- 12:53 PM Revision 3c998621 (taxeditor): Make specimen selection dialog horizontally scrollable
- 12:17 PM Revision d6c56cdc (cdmlib): ref #6682 further fixes for taxon relationship formatting - fix referenced entity issues
- 12:10 PM Revision fcbac3e6 (taxeditor): Show possible exception in dialog
- 12:07 PM feature request #7657 (Rejected): Use HQL query for loading character matrix
- 11:43 AM Revision a81acd75 (cdmlib): revert commit ff21181c
- 11:39 AM Revision 6f78f667 (cdmlib): deproxy of entities in TaggedTextBuilder
- 10:14 AM bug #7641: Reference editor: Error when incerting several new authors into a new author team
- 
 - 08:52 AM Revision b3fb4578 (taxeditor): adapt editor to change getFieldUnitForGatheringEvent to findFieldUnitForGatheringEvent
- 08:48 AM Revision 90ec321a (cdmlib): ref #6682 further fixes for taxon relationship formatting - relsec and authors
- 08:18 AM Revision 81502ddd (cdmlib): ref #6682 further fixes for taxon relationship service - better separators
- 12:49 AM Revision 82eb3374 (cdmlib): ref #6682 further fixes for taxon relationship service
- 12:05 AM Revision d7909683 (cdmlib): ref #6682 further fixes for taxon relationship service
08/15/2018
- 10:14 PM Revision 977a388a (cdmlib): ref #6682 fix directions for taxonRelationship service
- 10:07 PM Revision 973082b3 (cdmlib): ref #6682 further fixes for taxonRelationship service
- 09:13 PM Revision 1fab5922 (cdmlib): ref #6682 some changes to test taxon relationship service
- 08:16 PM Revision c6a7335e (cdmlib): ref #6682 adapt inverse MAN symbol in test
- 08:12 PM bug #7656 (Duplicate): Adapt inverse symbol for MisappliedName relationship type
- this is required for #6682
still need update script here - 08:10 PM Revision d50a2175 (cdmlib): ref #6682 adapt taxon rel type symbols in test in for MAN inverse type
- 07:30 PM Revision 33852ad0 (cdmlib): ref #6682 first implementation of taxon relationship formatter and web service
- 05:49 PM Revision a186543e (taxeditor): ref #7518 Pre-load and select previously selected element
- 05:47 PM Revision ed983c96 (cdmlib): ref #7492 handled unpublished in NameCatalogueController.doGetTaxonInformation
- 05:06 PM Revision 6959d272 (taxeditor): Fix possible NPE
- 04:56 PM Revision 938551ac (cdmlib): cleanup
- 04:56 PM Revision 6d921b88 (cdmlib): fix non compiling code in CommonServiceImpl (works on other installations but not on mine)
- 04:56 PM Revision 93cd99ee (cdmlib): fix row count issue for CsvImportBase
- 04:56 PM Revision 3994e588 (cdmlib): cleanup
- 03:38 PM feature request #7518 (Resolved): remaining issues for usage of NatTable for bulkeditor
- 03:31 PM feature request #7518: remaining issues for usage of NatTable for bulkeditor
- ~~**possibility to copy from a cell content**: On linux the context menu does not exist at all but CTRL+C works. I th...
- 03:37 PM Revision 596ef595 (taxeditor): ref #7518 Fix colums sizes -> show horizontal scrollbars
- 03:20 PM Revision e229bf65 (taxeditor): adapt taxeditor to changes in DerivedUnitFacade
- 03:20 PM Revision a160d195 (taxeditor): do not allow to add NameDescriptions in bulkeditor
- 03:18 PM Revision ec35f482 (taxeditor): ref #7518 Soften colors for deduplication
- 03:02 PM Revision 16a514f4 (taxeditor): ref #7518 Reduce size of index column
- 02:40 PM Revision 737c3638 (cdmlib): adapt occurrence search to changes in derivedUnitFacade
- 02:37 PM Revision 5a65460f (cdmlib): adapt cdm light test
- 02:22 PM Revision c17ca5af (cdmlib): fix NPE in cdm light export
- 02:04 PM Revision 745fac28 (cdmlib): Merge branch 'develop' of ssh://dev.e-taxonomy.eu/var/git/cdmlib into develop
- 01:51 PM Revision 544dc46c (taxeditor): Fix exception label for URI text elements
- 01:44 PM Revision 55f7ad0e (cdmlib): minor
- 01:38 PM Revision e2ba0554 (cdmlib): minor
- 01:18 PM Revision 2201d866 (cdmlib): adapt abcd import to changes in derivedUnitFacade
- 01:17 PM Revision 7d2bfaed (cdmlib): fix test for getKindOfUnit
- 01:00 PM Revision 4047c748 (cdmlib): adapt test for cdm light to last changes
- 12:52 PM Revision c6716d5c (cdmlib): Merge branch 'feature/specimenPortal' into develop
- 12:52 PM Revision 10b00df8 (cdmlib): derivedUnitFacade should not give back the kindOfUnit for the fieldUnit only but for the derived unit
- 12:51 PM Revision 6492ba96 (cdmlib): adapt sec ref title with datePublished freeText
- 12:23 PM feature request #6321 (Resolved): Implement parallel loading + progress bar for loading objects into the bulk editor
- 09:54 AM feature request #6321: Implement parallel loading + progress bar for loading objects into the bulk editor
- Comment #6321#note-40: I just added a delay of 500ms to wait for the previous job to finish. Waiting explicitily is v...
- 12:16 PM bug #7641: Reference editor: Error when incerting several new authors into a new author team
- All new authors, except the last one are not saved = they can not be selected.
- 12:06 PM bug #7641: Reference editor: Error when incerting several new authors into a new author team
- http://test.e-taxonomy.eu/cdmserver/phycobank_production/app/registration#!workingset/1c70fa46-c7a5-43e7-922a-379b200...
- 11:44 AM bug #7641: Reference editor: Error when incerting several new authors into a new author team
- 2018-08-15
Documentation http://test.e-taxonomy.eu/cdmserver/phycobank_production/app/registration#!workingset/8be1a... - 11:33 AM Revision 4315c73d (cdmlib): adapt authorship string ion cdmlight
- 11:10 AM Revision cef17ca3 (cdmlib): Increase version number of site skin project
- 10:05 AM Revision c31ff29d (cdmlib): kindOfUnit for all derivates not only for field units
- 10:03 AM Revision 23daf51d (taxeditor): Fix releases link
- 10:02 AM Revision e288ba50 (cdmlib): Fix releases link
- 09:13 AM feature request #7653: [DISCUSS] Delete NameFacts => Result: no
- WGB:
richtig wichtig erscheint mir vor allem die Sache mit den Typen. Aber für alle Fälle gilt, dass man das vorlä...
08/14/2018
- 09:22 PM Revision 66e51de3 (taxeditor): ref #6321 Load asynchronously loaded entities into main session
- 09:22 PM Revision 88ef5f8b (taxeditor): ref #6321 Wait for previous search to finish
- 09:22 PM Revision 970a5512 (taxeditor): Change label of feature tree widget for descriptive date set editor
- 09:22 PM Revision a433aeeb (taxeditor): Allow either categorical xor quantitative data for characters
- 06:54 PM feature request #7655 (Duplicate): References Editor: book section offers title field
- References Editor: A book section does not provide a title field, yet.
External users might miss this.
Workaround... - 06:51 PM feature request #7654 (Duplicate): New registration page existing publications combobox does 'begins with search' on author names
- The search on bibliographic authors is a full text search.
Example "Lange-Bert" (see screen shot) is searching for t... - 04:41 PM feature request #7648: Create taxonrelation to genus or species when subordinate names are created
- Also after import of new higher classifications we need to attache subgeneric taxa to their according taxa in bulk.
... - 04:38 PM feature request #7648: Create taxonrelation to genus or species when subordinate names are created
- Andreas Kohlbecker wrote:
> When creating a species a new Taxon needs to be created for this species and the new tax... - 04:26 PM feature request #7653: [DISCUSS] Delete NameFacts => Result: no
- WGB:
ich sehe da eine Reihe von Anwendungen für Namens-bezogene Fakten:
* ~~Etymologie – ist ganz allgemein wie ein... - 10:25 AM feature request #7653: [DISCUSS] Delete NameFacts => Result: no
- AM:
upps, das ist mir vollständig neu, dass für Namen über den Bulkeditor auch (Name-)facts editiert werden können... - 10:23 AM feature request #7653 (Closed): [DISCUSS] Delete NameFacts => Result: no
- NameFacts are currently very rarely used except for protologues. Protologues will be handled with nomenclatural sourc...
- 04:00 PM Revision 012d4a65 (taxeditor): Revert "ref #6321 Wait for canceled search to finish before starting new search"
- This reverts commit 36ee2736a960471161a354379845f770027286c4.
- 03:07 PM Revision 203a0b07 (cdm-server): Update CI link
- 03:04 PM Revision 696940b9 (taxeditor): Fix broken releases link
- 03:02 PM Revision b1f5279e (taxeditor): Update developers information
- 02:56 PM Revision f8b62135 (cdmlib): Remove broken link
- 10:21 AM Revision 135547e5 (cdmlib): Merge branch 'develop' into feature/specimenPortal
- 10:21 AM Revision 545f8115 (cdmlib): smaller changes on specimenDTOs
- 10:17 AM Revision 276f39f6 (cdm-dataportal): add the treeview as third variant for the specimen page
- 09:49 AM feature request #7281 (Closed): Implement bromelian import
- 09:46 AM bug #7638 (Resolved): problem with media data missing meta data
- 09:42 AM bug #7614 (Closed): IndexOutOfBoundsException after deleting in bulkeditor
- works fine now and the code seems to be correct.
- 09:12 AM feature request #7652 (New): add possibility to delete only the taxon node and keep the taxon in taxon navigator
- 12:52 AM Revision 8648170e (cdmlib): ref #7651 #7622 using nameService instead of CdmRepository to avoid bean factory problems
08/13/2018
- 11:38 PM Revision 0faf24b5 (cdmlib): ref #7651 #7622 relaxing requirement for an available registration minter
- 11:02 PM task #7651 (New): RegistrationManager implemented
- The commit:6ed17427 which was made for #7622 contains business logic which was placed in the RegistrationService for ...
- 10:57 PM task #7650 (New): RegistrationFactory implemented
- The commit:6ed17427 which was made for #7622 contains factory methods (at least one) which were placed in the Registr...
- 10:53 PM Revision 148bdb5b (cdmlib): ref #7622 addTypeDesignation() to receive registration uuids instead of objects
- 10:51 PM Revision 6f1b1416 (cdm-vaadin): ref #7622 simplyfying code be replacing targetRegistration for type designations by map for popupeditors and reg uuids
- 07:32 PM Revision dd3f7f9d (cdm-vaadin): ref #7622 persisting new registrations only when typeDesignations have been added
- 07:30 PM Revision 6ed17427 (cdmlib): ref #7622 preliminarily moving all registration management methods fom cdm-vaadin into the RegistrationService - needs further refactoring
- 07:21 PM bug #7622: RegistrationWorkingsetEditor: navigating to other pages with fresh registrations leaves empty registrations in the system
- Updating the subject to better reflect the cause
- 05:21 PM feature request #6682: Formatter and DTO for taxon relationships (e.g. misapplied names)
- This should rather be a formatter for concept relations and a new DTO service in remote.
- 04:34 PM bug #7649 (Closed): Term editor loads/saves extremely slow
- Walter:
"Der Term Editor braucht extrem lange, um aufzugehen – macht nichts, aber könnte ja sein, dass da etwas n... - 04:31 PM feature request #6321: Implement parallel loading + progress bar for loading objects into the bulk editor
- Patrick Plitzner wrote:
> Andreas Müller wrote:
> > when testing a couple of times I got an EagerLoadingException c... - 04:20 PM feature request #6321: Implement parallel loading + progress bar for loading objects into the bulk editor
- Andreas Müller wrote:
> when testing a couple of times I got an EagerLoadingException caused by an NoHttpResponseExc... - 03:26 PM feature request #6321: Implement parallel loading + progress bar for loading objects into the bulk editor
- Andreas Müller wrote:
> When running a search and stopping it by running a new search the results of the first searc... - 04:30 PM bug #7614 (Resolved): IndexOutOfBoundsException after deleting in bulkeditor
- 04:29 PM bug #7614: IndexOutOfBoundsException after deleting in bulkeditor
- There are cases when -1 is returned as the current row index. This is now caught before getting the element at the in...
- 04:05 PM bug #7555: TaxonServiceImpl.findTaxaAndNames() broken for cichoriae searching for "Lapsana communis"
- Also an issue for Nepenthes ampullaria
http://caryophyllales.org/nepenthaceae/cdm_api/proxy/http%253A%252F%252Fap... - 01:33 PM bug #7555 (Resolved): TaxonServiceImpl.findTaxaAndNames() broken for cichoriae searching for "Lapsana communis"
- please review
- 01:32 PM bug #7555: TaxonServiceImpl.findTaxaAndNames() broken for cichoriae searching for "Lapsana communis"
- fixed in commit:0d70754
- 01:29 PM bug #7555: TaxonServiceImpl.findTaxaAndNames() broken for cichoriae searching for "Lapsana communis"
- also reported by walter
http://caryophyllales.org/nepenthaceae/cdm_api/proxy/http%253A%252F%252Fapi.cybertaxono... - 03:26 PM Revision 36ee2736 (taxeditor): ref #6321 Wait for canceled search to finish before starting new search
- 03:20 PM feature request #7648 (Resolved): Create taxonrelation to genus or species when subordinate names are created
- When creating a species a new Taxon needs to be created for this species and the new taxon needs to be related to the...
- 03:00 PM Revision a8d014b2 (cdm-server): Fix link to installation site
- 02:28 PM feature request #7506 (Duplicate): Allow direct editing bulk editor
- 02:27 PM feature request #7518: remaining issues for usage of NatTable for bulkeditor
- Andreas Müller wrote:
> The following comment was missing when the ticket was copied from #7439: "Additionally offer... - 01:17 PM feature request #4383: multiple issues with de-duplication of references in bibliography
- Same or similar problem reported by Walter:
bei http://caryophyllales.org/nepenthaceae/cdm_dataportal/taxon/463255... - 01:09 PM task #3249 (Duplicate): [DISCUSS] Free text search for specimen details
- this seems like a duplicate of #3223
The requirement details given in this issue are very campanula secific and co... - 01:04 PM bug #7645 (Closed): specimen admin preferences are not saved
- works now
- 09:53 AM bug #7645: specimen admin preferences are not saved
- Applied in changeset commit:taxeditor|3935afdf45ef9ddc44850fab61cf53ba79125643.
- 09:45 AM bug #7645 (Resolved): specimen admin preferences are not saved
- 09:13 AM bug #7645 (Closed): specimen admin preferences are not saved
- The specimen admin preferences are not in the database after clicking apply or OK.
- 01:03 PM bug #7647 (Resolved): accepted taxa also used as MAN or Pro Parte Synonym are displayed as MAN in details view
- 01:02 PM bug #7647 (Closed): accepted taxa also used as MAN or Pro Parte Synonym are displayed as MAN in details view
- 12:47 PM bug #6289: “Back to images” link as “Back to taxon page” when in table-less mode
- Fixing this should be easy and quickly.
- 12:41 PM Revision 7c4fcd5c (taxeditor): fix missing label for feature in description element details view
- 12:31 PM Revision a316f71d (taxeditor): accepted taxon which is also used as MAN should be displayed correctly
- 11:58 AM feature request #6677: Add "hort." flag to Botanical names
- AM:
ok, das heißt, hort. könnte eigentlich an allen 4 Stellen stehen (Kombinations- und Ex-Author, sowie auch als ... - 11:51 AM feature request #6677: Add "hort." flag to Botanical names
- WGB:
im Stearn (4ed, 355) wird die Abkürzung „hort.“ als „hortorum, of gardens; hortulanorum, of gardeners“ defini... - 10:43 AM feature request #6677: Add "hort." flag to Botanical names
- AM:
Hallo Walter,
ich glaube im Zuge des Nepenthes Imports bin ich irgendwann mal auf die Abkürzung „hort.“ ges... - 10:38 AM feature request #7646 (Closed): Implement parser and formatter for "hort."
- as soon as #6677 is implemented
- 09:51 AM feature request #7419 (Closed): Provide example NormalImplicit import file for phycobank higher taxon graph imports
- I think we can close this ticket.
- 09:30 AM feature request #7419: Provide example NormalImplicit import file for phycobank higher taxon graph imports
- Why did you pass this issue to me? From reading the comments I got the impression that this issue is completed. I thi...
- 09:18 AM Revision 240ff660 (taxeditor): fix #7645: get the correct values from db for specimen admin preference page
- 09:17 AM Revision 3935afdf (taxeditor): fix #7645: get the correct values from db for specimen admin preference page
08/10/2018
- 09:41 PM feature request #6321: Implement parallel loading + progress bar for loading objects into the bulk editor
- Also got an NPE when deleting (and saving the delete) of a Reference. Maybe this is also related to parallel loading?...
- 09:21 PM feature request #6321: Implement parallel loading + progress bar for loading objects into the bulk editor
- Reloading after save and setting selection after save if selection is one of the later records in a huge dataset is s...
- 09:17 PM feature request #6321: Implement parallel loading + progress bar for loading objects into the bulk editor
- In name bulk editor changing e.g. specific epithet does NOT change the labels for "Name" and "Scientific name" and al...
- 09:07 PM feature request #6321: Implement parallel loading + progress bar for loading objects into the bulk editor
- when testing a couple of times I got an EagerLoadingException caused by an NoHttpResponseException. May the test serv...
- 08:33 PM feature request #6321 (Feedback): Implement parallel loading + progress bar for loading objects into the bulk editor
- When running a search and stopping it by running a new search the results of the first search are still (partly) avai...
- 08:18 PM feature request #7429 (Closed): Improve parsing and formatting for VerbatimTimePeriod
- 08:11 PM feature request #7506 (Feedback): Allow direct editing bulk editor
- To me this seems to be a duplicate for #7503. Can you please double check and if you agree close ticket as duplicate ...
- 08:01 PM feature request #7518: remaining issues for usage of NatTable for bulkeditor
- The following comment was missing when the ticket was copied from #7439: "Additionally offering tooltips saying that ...
- 07:56 PM feature request #7518: remaining issues for usage of NatTable for bulkeditor
- By the way, once we have >3 columns we will need horizontal scrolling anyway. So maybe this can already be implemente...
- 07:49 PM feature request #7518 (Feedback): remaining issues for usage of NatTable for bulkeditor
- * possibility to copy from a cell content
* this works now except for the fact that in editing mode the right cli... - 07:27 PM bug #7544 (Closed): Dragging a misapplication onto itself throws an exception in name editor
- Disabling d&d seems to work. Advanced features copied to #7609 so we can close this ticket.
- 07:15 PM bug #7603 (Closed): Changing a user group does not work as expected
- As far as I understand the ticket this is fully fixed.
- 02:27 PM task #7420: Import for higher taxon graph for phycobank
- Andreas Müller wrote:
> What should be done with existing IAPT data. Should they be adapted to the new data model?
... - 02:23 PM task #7420: Import for higher taxon graph for phycobank
- What should be done with existing IAPT data. Should they be adapted to the new data model?
- 02:07 PM task #7420 (In Progress): Import for higher taxon graph for phycobank
- First version of import is ready and tested with Frey and WoRMS data running into empty local database.
Next step:... - 02:05 PM Revision 40f4f84c (cdmlib-apps): minor
- 02:05 PM Revision cc9428e1 (cdmlib-apps): ref #7420 first version of phycobank higher classification import
- 02:03 PM feature request #7419 (Resolved): Provide example NormalImplicit import file for phycobank higher taxon graph imports
- Wolf-Henning Kusber wrote:
> prefered: use a single excel sheet per classification
great, makes it easier - 12:31 PM Revision d3f77ada (cdm-dataportal): minor
- 10:12 AM Revision 7965ef92 (cdm-dataportal): add item list to table resolves the problem of rendering the description items
08/09/2018
- 01:09 PM feature request #7419: Provide example NormalImplicit import file for phycobank higher taxon graph imports
- prefered: use a single excel sheet per classification
- 01:02 PM feature request #7419 (Feedback): Provide example NormalImplicit import file for phycobank higher taxon graph imports
- There seems to be an open issue: As we decided to create a classification for each reference and create a new taxon p...
- 11:10 AM feature request #7419 (Resolved): Provide example NormalImplicit import file for phycobank higher taxon graph imports
- As we have decided on the format and an example file exists as attachement to #7420 I think we can close this ticket.
- 11:07 AM feature request #7643 (Feedback): cdmlight export: for bibliographic short citation use the freetext of the date as default
- 11:07 AM feature request #7643: cdmlight export: for bibliographic short citation use the freetext of the date as default
- This will throw an NPE if datePublished does not exist!!
Also it is a bit dangerous as freetext in some cases may ... - 10:20 AM feature request #7643 (Resolved): cdmlight export: for bibliographic short citation use the freetext of the date as default
- 10:19 AM feature request #7643 (Closed): cdmlight export: for bibliographic short citation use the freetext of the date as default
- mail of WB:
noch ein Problemchen mit dem Output:
Nepenthes Datenbank – Da habe ich die folgende Referenz:
sieh... - 11:03 AM feature request #7644 (Closed): Add "continued" flag to (Verbatim)Timeperiod
- ... to indicate that a reference (usually a database) is continously edited and has no end date (yet).
E.g. Berend... - 10:44 AM task #7420: Import for higher taxon graph for phycobank
- Please save future versions of the excel file in the current .xslx format, .xls is outdated.
- 10:19 AM Revision ad53bf18 (cdmlib): ref #7643: use freetext for bibliographic short citation
- 01:22 AM feature request #7640: Update ISO country names where necessary
- This is not related to vaadin but a general cdm issue.
There are a couple of issues related to ISO 3166, many of t...
08/08/2018
- 05:24 PM feature request #7642 (Rejected): PhycoBank Anzeige und Zugreifbarkeit von Basionymen in Vaadin (zur Diskussion)
- 100233
Für die Eingabe einer Umkomination musste ich die Literatur für das Basionym anlegen, um das Basionym einzuge... - 03:47 PM feature request #7549 (Closed): Show tooltip for data aggregation in character matrix
- 03:39 PM feature request #7637 (In Progress): Handle intext references in CDM light
- 02:57 PM feature request #7637: Handle intext references in CDM light
- the filter is implemented and is the default, with the configurator it is possible to configure, that needs to be imp...
- 02:28 PM feature request #7637 (In Progress): Handle intext references in CDM light
- During cdm light export we may want to handle intext references correctly.
As a first step we simply should remove... - 03:32 PM bug #7639: SpecimenTypeDesignationEditor: Altitude not saved and displayed properly
- Only the verbatim field functions, see 100123
- 02:52 PM bug #7639 (Closed): SpecimenTypeDesignationEditor: Altitude not saved and displayed properly
- Registration: 100118 ff.
Altitude: Input 1618
Save-> Display in Vaadin =1
Altitude: Input 1618, than klick int... - 03:30 PM bug #7641 (Closed): Reference editor: Error when incerting several new authors into a new author team
- Collection team:
A collection team was built with new members as
Owsianny, P.M., Marciniak G. & Trawiński, K... - 02:59 PM feature request #7640 (Closed): Update ISO country names where necessary
- Some of the currently used long labels are outdated. E.g. "Poland, Peoples Republic of" is now "Poland, Republic of"....
- 02:54 PM bug #7638: problem with media data missing meta data
- now the size is not set to 0 if an exception appears because of missing metadata.
- 02:41 PM bug #7638: problem with media data missing meta data
- the original exception is:
~~~
java.io.IOException: Could not read block (block start: 504, block length: 4245350... - 02:39 PM bug #7638 (Resolved): problem with media data missing meta data
- media imported via biocase sometimes do not show size and metadata and or exception "file not found"
AM:
Bei de... - 02:51 PM Revision 633a72e4 (cdmlib): do not throw an exception if metadata could not be loaded
- 02:51 PM Revision 2d006ce7 (cdmlib): filter intext references in cdmlight export
- 02:49 PM Revision c80855f5 (taxeditor): do not set size etc to 0 if loading meta data fails
- 01:43 PM Revision 2d49766c (taxeditor): ref #7597 Use LongRunningTaskService for taxon aggregation
- 01:42 PM Revision 0f14b608 (cdmlib): ref #7597 Use LongRunningTaskService for taxon aggregation
- 12:58 PM feature request #6486: Implement handling of IntextReferences in dataportal
- I just see that we do have types for cdm:reference and cdm:source. Probably the later one is usually better as it rep...
- 09:41 AM Revision 3a45849e (taxeditor): ref #7549 Add fallback tooltip
- 09:41 AM Revision b5fcefe6 (taxeditor): catch possible widget is exposed exception
- 09:03 AM task #7636 (Closed): remove obsolete code which dissociates removed TypeDesignations from Registrations
- `SpecimenTypeDesignationWorkingsetEditorPresenter.saveBean()` contains code which is no longer needed since #7077 is ...
08/07/2018
- 06:40 PM Revision 0ceb2225 (cdmlib): ref #7597 Change label of aggregated taxon description
- 06:03 PM Revision dc45cce3 (cdmlib): ref #7597 Fix row wrapper creation for direct description children
- 04:52 PM Revision 02d5b1b7 (cdmlib): ref #7597 Fix potential exception for multiple associated taxa
- 04:52 PM Revision 3b3f3609 (cdmlib): ref #7597 Use remote progress monitor for taxon aggregation
- 04:52 PM Revision bd95f27d (cdmlib): ref #7597 Fix multi rep exception
- 04:52 PM Revision a40b31c1 (cdmlib): ref #7597 Extend compare wrapper to support all statistical measures
- 04:52 PM Revision 1210623a (cdmlib): ref #7597 Set taxon as cdm entity of update result
- 04:52 PM Revision d1238e5b (cdmlib): ref #7597 Implement taxon description aggregation
- 04:52 PM Revision 785b88aa (taxeditor): ref #7597 Adapt to service method changes
- 04:07 PM feature request #6321: Implement parallel loading + progress bar for loading objects into the bulk editor
- I just reactivated and tested a bit. I made some small changes I think.
- 03:44 PM feature request #6321: Implement parallel loading + progress bar for loading objects into the bulk editor
- Did you change anything or did you simply reactivate?
- 04:00 PM Revision 6328ed42 (taxeditor): ref #7597 Use remote progress monitor for taxon aggregation
- 03:37 PM Revision 4bbec44a (cdmlib): cleanup
- 03:22 PM Revision c233acf5 (cdmlib): use MediaDTO in DerivateDTO
- 03:01 PM Revision a692a96b (cdmlib): Merge branch 'develop' into feature/specimenPortal
- 03:01 PM Revision 77993547 (cdmlib): smaller changes in SpecimenDTOs
- 02:46 PM Revision 267da0d1 (cdm-dataportal): create an item_list for specimen page
- 10:25 AM bug #7635 (New): ObjectNotFoundException during delete of synonym and name
- ~~~
login : w.berendsohn
editor version : 5.1.2
server : api.cybertaxonomy.org (cybertaxonomy.org) / caryo_nep... - 10:24 AM bug #7634 (New): Timeout/Performance problems in Taxeditor
- Walter
"ich bekomme (hier zuhause, eigentlich ein ganz guter Anschluss) ab und zu die untenstehende Fehlermeldung,... - 10:22 AM bug #7633 (New): MySQLIntegrityConstraintViolationException - Duplicate entry during fact editing
- Walter:
"ich habe 2 Notes zusammengefasst und da noch ein bisschen korrigiert, gab u.a. Meldung, ich glaube schon,... - 10:20 AM bug #7632 (New): NullPointerException in EditFromSelectionWizard
- Walter:
"ich habe im Bulk Editor eine existierende Generic Referenz mit der korrekten Book Section Referenz (war s...
08/06/2018
- 06:47 PM bug #7631 (Worksforme): PhycoBank Vaadin: Institution selected, edit with Collection code fails
- http://test.e-taxonomy.eu/cdmserver/phycobank_production/app/registration#!workingset/59ddc453-1333-4577-9823-ea9e3d9...
- 03:25 PM bug #7617 (Closed): Specimen TypesDesignations Editor - aus dem Editor heraus neu angelegter CollectionCode nicht auswählbar
- Bug is fixed!
- 01:50 PM Revision 7c29c9d5 (taxeditor): ref #7597 Make taxon aggregation experimental
- 01:21 PM Revision 2400a412 (taxeditor): adapt editor to changes in biocase query
- 12:57 PM Revision c9e06829 (taxeditor): adapt editor to changes in biocase query
- 12:30 PM Revision 28459634 (cdmlib): adapt cdm light test to changes
- 12:18 PM bug #7630 (Closed): blocking registration relations get lost after saving adding a typedesignation to a newly created "typification only" registration
- closely related to #7629
- 12:16 PM bug #7629: creating a typification only registration should not be possible if the names protologue is in the current workingset
- Hi Henning,
I modified the workflow for creating new registrations. I introduced more constraints regarding the ty... - 12:05 PM bug #7629 (Resolved): creating a typification only registration should not be possible if the names protologue is in the current workingset
- Applied in changeset commit:cdm-vaadin|11247507b69b5b1c062e3d6469d37b5e5cea94b3.
- 12:04 PM Revision 11247507 (cdm-vaadin): fix #7629 restricting new registrations to those which make sense in the current workingset
- 11:58 AM feature request #7626 (Duplicate): PhycoBank Angefangene Registrierungen erzeugen PhycoBank Identifier und/oder blank registrations
- 11:58 AM bug #7582: prevent from creating empty registrations
- The preferred solution to this problem would be store the new Registration only when a type designation was added and...
- 11:53 AM Revision 96323255 (cdmlib): adapt tests to changes in biocase impot
- 11:52 AM bug #7625 (Duplicate): RegistrationWorkingsetEditor: if a registered name is selected, the same name seems to be registered newly
- 11:42 AM Revision d70a126f (cdmlib): all DTOs for cdm entities should extend TypedEntityReference
- 10:44 AM Revision 3fccb9f5 (cdmlib): add hasImage to biocase import
- 10:29 AM Revision b6e8128f (cdmlib): fix handling of sec reference in cdm light export
08/03/2018
- 09:33 PM bug #7628 (Closed): Create registration for existing name (typification only) creates two registratios
- problem solved.
in the workflow code a blocking registration was created for the typification only registration, t... - 09:25 PM bug #7628 (Resolved): Create registration for existing name (typification only) creates two registratios
- Applied in changeset commit:cdm-vaadin|2a2845cefcb5dd887ba96665180c97b5d63ff11c.
- 08:44 PM bug #7628 (Closed): Create registration for existing name (typification only) creates two registratios
- Start from the working set where the already registered name is listed and and select the name in the existing names ...
- 09:24 PM Revision 2a2845ce (cdm-vaadin): fix #7628 removing misconception in workflow code
- 09:23 PM Revision d46672d0 (cdm-vaadin): improving readability of code
- 09:20 PM bug #7629 (Closed): creating a typification only registration should not be possible if the names protologue is in the current workingset
- 08:37 PM feature request #7627 (New): registrationsystem prevents from creating duplicate registrations of the same name by simultanuous action
- in cases where a unregistered name exists in the datanbase it is possible to create two or more registrations for the...
- 07:54 PM bug #7617 (Feedback): Specimen TypesDesignations Editor - aus dem Editor heraus neu angelegter CollectionCode nicht auswählbar
- the bug in #7590 has been fixed, please close this issue if the collections codes are found now.
- 07:51 PM bug #7617: Specimen TypesDesignations Editor - aus dem Editor heraus neu angelegter CollectionCode nicht auswählbar
- Andreas Kohlbecker wrote:
> It seams as if only collections are found which also have a institute - Restriction OR m... - 12:51 PM bug #7617: Specimen TypesDesignations Editor - aus dem Editor heraus neu angelegter CollectionCode nicht auswählbar
- It seams as if only collections are found which also have a institute - Restriction OR must be implemented as outer j...
- 11:35 AM bug #7617: Specimen TypesDesignations Editor - aus dem Editor heraus neu angelegter CollectionCode nicht auswählbar
- Wird vielleicht auf dem Namen gesucht? Namen von Alteinträgen sind in der Auswahlliste, wenn ein Code da ist, wird de...
- 07:45 PM Revision def2a398 (cdmlib): ref #7590 fixing join types for restriction operations
- 06:53 PM feature request #7611 (Resolved): media types with media uris are clickable
- Implemented, but I needed to display the link to the image as icon, which now directly follows the "[icon]". This was...
- 06:47 PM Revision 60e522b7 (cdm-vaadin): re-enabling bookSecion as reference type
- 06:45 PM Revision 58a5f647 (cdmlib): ref #7611 implementing typeDesignation media service and MediaDTO
- 06:43 PM Revision cc780a77 (cdmlib): typo in documentation
- 06:42 PM Revision 723aa98c (cdm-dataportal): ref #7611 adding clickable external link to media specimen types with uri
- 05:47 PM feature request #7626 (Duplicate): PhycoBank Angefangene Registrierungen erzeugen PhycoBank Identifier und/oder blank registrations
- Jede angefangene Registrierung erzeugt einen Blank Record, oder einen fast leeren Record mit PhycoBank Identifier. Es...
- 05:28 PM bug #7625 (Duplicate): RegistrationWorkingsetEditor: if a registered name is selected, the same name seems to be registered newly
- http://test.e-taxonomy.eu/cdmserver/phycobank_production/app/registration#!workingset/1eb5742f-3e18-4970-bfa5-4a96e1d...
- 04:57 PM feature request #7624 (Closed): Note field for Reference in Vaadin
- In the editorial process, users need editorial notes for references.
The Curator needs to internally store some info... - 04:57 PM feature request #4227: handle generated resources in eclipse workspace
- Katja Luther wrote:
> I still have the error message
>
> Plugin execution not covered by lifecycle configuration... - 04:06 PM feature request #4227: handle generated resources in eclipse workspace
- I still have the error message
Plugin execution not covered by lifecycle configuration: org.apache.maven.plugins:... - 04:46 PM feature request #7458 (Closed): Note field for TaxonName , NameType and SpecimenType editors
- Alles getestet, Perfekt! Ich nutze es z.B. für nicht eingebbare Daten oder Unklarheiten in den Daten.
- 04:40 PM Revision 90b55c3b (cdmlib): add missing loggin to remote controllers
- 04:39 PM Revision b21da74d (cdmlib): ref #7591 ReferencePropertyDefinitions adding missing data to 'all'
- 04:21 PM bug #7537 (Rejected): Taxeditor can not connect to restarted, added cdm instance
- OK, it seems as this is not reproducible. I am closing the issue as rejected.
- 04:09 PM bug #7537: Taxeditor can not connect to restarted, added cdm instance
- 1. I commented the campanula DB
1. Restarted the cdmserver
1. Tried to connect to instances that were already up du... - 10:58 AM bug #7537: Taxeditor can not connect to restarted, added cdm instance
- You need to **add a new cdm-remote instance to a cdmserver start only this instance and then try to connect the Taxed...
- 07:59 AM bug #7537 (Feedback): Taxeditor can not connect to restarted, added cdm instance
- Is this still an issue? The "Connect" button is not greyed out for me. I could also log in.
- 03:30 PM bug #7623: missing or broken import issues for ABCD import
- Katja Luther wrote:
> * ~~Bei der Suche mit Landesfilter GR habe ich grundsätzlich kein Ergebnis zurückbekommen. Auf... - 03:22 PM bug #7623 (In Progress): missing or broken import issues for ABCD import
- 03:21 PM bug #7623: missing or broken import issues for ABCD import
- Aufsammlungsdaten fehlen auch beim AlgaTerra New-Import.
- 03:18 PM bug #7623 (In Progress): missing or broken import issues for ABCD import
- * Bei der Suche mit Landesfilter GR habe ich grundsätzlich kein Ergebnis zurückbekommen. Auf http://ww2.bgbm.org/Herb...
- 02:55 PM Revision f4115d78 (cdmlib): fixing wrong usage of findByTitle* Method with IIdentifiableEntityServiceConfigurator - test implemented
- 02:45 PM bug #7622 (Closed): RegistrationWorkingsetEditor: navigating to other pages with fresh registrations leaves empty registrations in the system
- The RegistrationWorkinsetEditor leaves empty registrations in the database when a new 'typification only registration...
- 02:43 PM bug #7615 (Closed): Registrations not searchable in the PhycoBank portal
- 02:42 PM feature request #7621 (Closed): registration search also covers typified names
- The typified names associated with the typedesignations are not covered by this search. Maybe we need to extend the s...
- 02:01 PM feature request #6740 (Closed): Popup Editor for NameTypeDesignation
- works
- 02:00 PM bug #7207 (Closed): TeamOrPersonField and PersonField comboboxSelect is configurable to use different cache types
- is ok!
- 01:59 PM bug #7344 (Closed): TaxonNamesEditor to fill authorship fields automatically if nomref and basionym are set?
- works!
- 01:57 PM bug #7608 (Closed): TypeDesignationSetManager: string representations for media types are missing
- Henning sagt: PASST!
- 01:54 PM Revision e1dd683a (taxeditor): ref #7597 Disable aggregate menu item
- 01:53 PM bug #7574 (Closed): IllegalStateException: Multiple representations ... when saving ReferenceEditor with in Reference ...
- WORKS!
- 01:52 PM feature request #7570 (Closed): Institution editor implemented
- Henning: the institution title is sufficient, address not needed!
- 01:48 PM bug #7557 (Worksforme): TaxonNamePopEditor: com.vaadin.data.Property$ReadOnlyException on saving a sub popup editor
- this issue did not occure since 14 days, seems to be solved
- 01:47 PM bug #7535 (Closed): TeamOrPersonField: remove OK button an select the chosen enitity immediately
- the changes made for this issue caused a couple of bugs which are all solved now, can be closed now.
- 01:46 PM feature request #6321 (Resolved): Implement parallel loading + progress bar for loading objects into the bulk editor
- Parallel loading is reactivated. I could not find any bugs until during random tests
- 01:45 PM feature request #7533 (Closed): add typeStatus filter to registration list
- new ticket with extended requirements: #7610
- 01:43 PM bug #7528: Allow changing the Registration status in the RegistrationWorkingsetEditor
- Henning created an new and closely related ticket: #7618
- 01:41 PM task #7425 (Closed): Implement VerbatimTimeField for cdm-vaadin and use this in the ReferencePopupEditor
- done and working
- 01:40 PM bug #7353 (Closed): SpecimenTypedesignationsWorkingsetEditor: error on saving after changing kindOfUnit
- 01:38 PM bug #7353: SpecimenTypedesignationsWorkingsetEditor: error on saving after changing kindOfUnit
- this no longer happens
- 01:40 PM bug #7354 (Closed): DerivedUnitConverter handles associated SpecimenTypeDesignation correctly
- seems to work
- 01:37 PM task #7343 (Closed): PersonField allows editing the nomenclaturalTitle
- works!!!
- 01:37 PM task #7338 (Closed): Validate taxon name against the higher taxon name
- works as expeceted
- 01:36 PM feature request #7462 (Rejected): references in type footnotes are clickable links
- Yes, no longer needed.
- 01:31 PM feature request #7595 (Closed): PhycoBank Portal - Order Reference name
- ok, maybe we could add one line space below the taxon name.
- 01:28 PM feature request #7496 (Closed): TaxonNodes in cdm_taxontree can either link to taxon or reference search result pages
- fully solved and tested
- 01:26 PM feature request #7495 (Closed): Registration page implemented
- Is ready even if some bugs exists for which we have other tickets, closing this issue.
- 01:24 PM feature request #7494 (Closed): RegistrationSearch implemented
- 01:24 PM feature request #7620 (Closed): RegistrationSearch implemented with Reference filter
* Reference (like search with wildcard)
see #7494- 01:22 PM bug #7592 (Closed): Search Button PhycoBank Test
- resolved and tested, add commit?
- 12:31 PM Revision 6c7e59f3 (taxeditor): specimen admin prefs need to be saved
- 12:04 PM Revision 32333a52 (cdmlib): adapt country path in abcd query
- 11:59 AM feature request #7619 (New): Registration Item: better layoout to avoid dao element overlapping
- Gute Idee: Im Modus preparation ist die ID etwas heller.
Schlecht: Überlagerung der ID mit den dunklen Elementen b... - 11:58 AM Revision 9392fe08 (cdmlib): adapt country path in abcd query
- 11:53 AM Revision 02e81ecf (cdmlib): fixing wrong usage of findByTitle* Method with IIdentifiableEntityServiceConfigurator
- 11:48 AM Revision f0ab4e90 (cdmlib): fixing wrong usage of findByTitle* Method with IIdentifiableEntityServiceConfigurator
- 11:46 AM feature request #7618 (Duplicate): PhycoBank Curator rights
- Curator can search "preparation", "ready", "curation" = user rights.
Curator needs"publish", "rejected"; add to cu... - 11:06 AM Revision 914fc748 (taxeditor): workaround for exception in loading image to see the imported meta data
- 10:40 AM Revision a101359e (taxeditor): ref #7614 Catch negative index when getting the row object
- 10:30 AM Revision fb147efa (cdmlib): parse collection date for abcd import
- 10:17 AM Revision 36d28440 (taxeditor): ref #7614 Fix possible IndexOutOfBoundException for label accumulation
- 09:08 AM Revision de2adfba (cdmlib): fix collector import if it is a single string value in gatheringAgentsText
- 09:08 AM Revision 4d0daece (taxeditor): ref #7614 Fix possible IndexOutOfBoundException
- 08:51 AM Revision e0609256 (taxeditor): Fix endless loop when searching for UUID in bulk editors
- 07:55 AM bug #7542 (Closed): Move synonym of homotypical group to taxon does not move the homotypical group correctly
- reviewed code and functionality in Editor. Seems good
08/02/2018
- 05:52 PM bug #7617: Specimen TypesDesignations Editor - aus dem Editor heraus neu angelegter CollectionCode nicht auswählbar
- Korrektur: Collection NMW, Cardiff (IH Code)
- 05:49 PM bug #7617 (Closed): Specimen TypesDesignations Editor - aus dem Editor heraus neu angelegter CollectionCode nicht auswählbar
- http://test.e-taxonomy.eu/cdmserver/phycobank_production/app/registration#!workingset/d547a306-fb43-474d-88df-41a91ae...
- 03:17 PM Revision 66e37e5a (cdm-vaadin): typo
- 02:42 PM task #7546 (Closed): Better guidance for users when creating registrations for exising names
- Label with explanations updated according to suggestion.
- 02:42 PM Revision 3bcd130a (cdm-vaadin): ref #7546 Label with explanations for users improved
- 01:32 PM bug #7615: Registrations not searchable in the PhycoBank portal
- We definitely need to extend the search so that typified names are also covered by the search. ... new ticket: #7621
- 01:29 PM bug #7615: Registrations not searchable in the PhycoBank portal
- data issue solved, name added to registration
- 11:39 AM bug #7615 (Feedback): Registrations not searchable in the PhycoBank portal
- The search behaves correctly. "Planothidium taeansa" is not found because there is no registration for the name "Plan...
- 12:08 PM Revision 5e1eb4fd (cdm-vaadin): ref #7591 ReferencePropertyDefinitions adding missing data to 'all'
- 11:49 AM Revision 4963a2c2 (taxeditor): fix IoobE in Biocase Provider Preference dialog
- 11:15 AM Revision b4e4e474 (taxeditor): change Nomenclatural Status Type to Status in details view
- 10:33 AM bug #6971: Collect all remaining appearances of multiple representation exceptions since 4.10
- mail of WHK:
Hallo zusammen,
ein Problem beim Datacleaning:
Porphyra
Hatte eine ungeparste „generic“ Referen...
08/01/2018
- 06:23 PM bug #7616 (Closed): reference page: show name types
- The specimen table header is shown even when only name types are available. The name types should be displayed correc...
- 05:53 PM bug #7615 (In Progress): Registrations not searchable in the PhycoBank portal
- ID-Suche = Perfekt, alle 10 Fälle, in denen keine Anzeige erfolgte, funktionieren jetzt über die ID-Suche
Was im A... - 05:43 PM bug #7615: Registrations not searchable in the PhycoBank portal
- ready for review.
- 05:43 PM bug #7615 (Resolved): Registrations not searchable in the PhycoBank portal
- Applied in changeset commit:cdm-dataportal|bb177c82fe3bf3c699fd30817cd82167f14fe47f.
- 05:35 PM bug #7615 (In Progress): Registrations not searchable in the PhycoBank portal
- This happens because the dataportal sends an empty querystring for the scientific name and the webservice is not igno...
- 05:14 PM bug #7615 (Closed): Registrations not searchable in the PhycoBank portal
- 100002 Planothidium taeansa
100003 Planothidium naradoense
sind im Vaadin Editor über die Nummer suchbar
http://... - 05:43 PM Revision bb177c82 (cdm-dataportal): fix #7615 cleaning registration search parameter 'taxonNameFilterPattern'
- 05:09 PM Revision f88c28ee (cdm-vaadin): adapting assertion to changed testdata
- 04:51 PM Revision 8115e340 (cdm-vaadin): fixing problems in test dataset with hibernate sequences for useraccount - comment
- 04:39 PM Revision 6b1127f8 (cdm-vaadin): fixing problems in test dataset with hibernate sequences for useraccount
- 02:27 PM bug #7614: IndexOutOfBoundsException after deleting in bulkeditor
- PS: Das scheint an dem Record selbst zu liegen.
- 02:24 PM bug #7614 (Closed): IndexOutOfBoundsException after deleting in bulkeditor
- mail of WB:
Hallo,
beim Springen auf einen Listeneintrag nach durchgeführtem Delete eines anderen bekomme ich u.... - 02:23 PM Revision 6d9071b7 (cdm-dataportal): adding missing font awesome font css to registration serarch form
- 11:07 AM feature request #7613 (New): Vaadin: Fehlervermeidung bei Anlegen einer Referenz
- Wunsch: Dass bei der Eingabe einer Referenz der häufigste Fall eingestellt ist.
D.h. Wird eine neue Referenz angel...
07/31/2018
- 06:13 PM feature request #7612 (Duplicate): CacheStrategy for MediaSpecimens
- The DerivedUnitFacadeCacheStrategy has no support for `MediaSpecimen`s.
see #7608 for which the creation of a stri... - 06:11 PM feature request #7611: media types with media uris are clickable
- Good idea, than the "[icon]" string makes really sense.
- 05:59 PM feature request #7611 (Feedback): media types with media uris are clickable
- It would be much easier to implement if the "[icon]" text would be clickable instead.
What do you think about this... - 05:57 PM feature request #7611 (Closed): media types with media uris are clickable
Media types should be rendered in the following form depending on their type:
* **unpublished** (has collection ...- 06:02 PM Revision 1158ebe8 (cdmlib): comment regarding #7608 in DerivedUnitFacadeCacheStrategy
- 06:00 PM bug #7608 (Resolved): TypeDesignationSetManager: string representations for media types are missing
- completely solved, please review
- 02:57 PM bug #7608 (In Progress): TypeDesignationSetManager: string representations for media types are missing
- 12:12 PM bug #7608 (Closed): TypeDesignationSetManager: string representations for media types are missing
Media types are currently represented as:
* Antigua and Barbuda. Holotype,
After the comma data is missing.
...- 05:55 PM Revision 7474a0ba (cdmlib): ref #7608 string representations for media types implemented
- 05:55 PM Revision 9630eead (cdm-vaadin): ref #7608 string representations for media types implemented - tests
- 05:11 PM feature request #7610 (Duplicate): Type search in PhycoBank Portal
- List of „Type desgnation status“
Automatic Kommentar: unverständlich und unnötig
Epitype Kommentar: wichtig
Holo... - 03:17 PM Revision 3d526586 (cdm-vaadin): commenting org.hibernate.SQL logging
- 02:36 PM task #7596 (In Progress): PhycoBank Portal - Formatting
- 10:24 AM task #7596: PhycoBank Portal - Formatting
- Nein, stört überhaupt nicht.
- 10:24 AM task #7596: PhycoBank Portal - Formatting
- Wolf-Henning Kusber wrote:
> zu 7: Okay, wenn wir hier zwischen Vaadin User Interface und EDIT Portal unterscheiden ... - 10:11 AM task #7596: PhycoBank Portal - Formatting
- zu 7: Okay, wenn wir hier zwischen Vaadin User Interface und EDIT Portal unterscheiden können. Im Vaadin UI stören mi...
- 01:51 PM Revision bb9378b6 (taxeditor): fix compile error
- 01:47 PM bug #7544 (Resolved): Dragging a misapplication onto itself throws an exception in name editor
- 01:46 PM bug #7544 (In Progress): Dragging a misapplication onto itself throws an exception in name editor
- As a first implementation d&d for concept relations are not provided anymore.
For d&d to another name editor I crea... - 01:44 PM bug #7544 (Resolved): Dragging a misapplication onto itself throws an exception in name editor
- Applied in changeset commit:taxeditor|b7e704af02bbd5214b09e110244470ab1969ad2a.
- 11:27 AM bug #7544: Dragging a misapplication onto itself throws an exception in name editor
- Katja Luther wrote:
> I removed the possiblity to drop at a misapplied name, but should it be possible to drag a mis... - 11:00 AM bug #7544 (In Progress): Dragging a misapplication onto itself throws an exception in name editor
- I removed the possiblity to drop at a misapplied name, but should it be possible to drag a misapplied name and drop i...
- 01:46 PM feature request #7609 (New): drag & drop misapplied names from one name editor to another editor
- copied from #7544:
To me it does not make sense to d&d a misapplication (or a ppSyn) within a name editor at all. We... - 01:42 PM Revision b7e704af (taxeditor): fix #7544: do not allow d&d for misapplied names
- 01:27 PM task #7420: Import for higher taxon graph for phycobank
- Hi, here comes the spread sheet with the first data for the import: attachment:Algen_Syllabus_NormalImplied_Test.xls
... - 01:26 PM Revision 54ce28cf (taxeditor): fix compile error
- 01:19 PM bug #7603: Changing a user group does not work as expected
- the collection of groups in user was not correctly updated.
- 01:19 PM bug #7603 (Resolved): Changing a user group does not work as expected
- Applied in changeset commit:taxeditor|78b5b7f70fef88f8a0bebba7aa3f5e7d85545514.
- 01:18 PM Revision 78b5b7f7 (taxeditor): fix #7603: changing permission group in edior needs to change the group in user
- 01:00 PM Revision 0ea0a5f8 (cdm-vaadin): ref #7607 TypeDesignationSetManager: types without enclosing brackets - adapting tests
- 01:00 PM Revision b59ec1a6 (cdmlib): ref #7429 fix date parsing in name parser test
- 12:19 PM feature request #7429 (Resolved): Improve parsing and formatting for VerbatimTimePeriod
- Applied in changeset commit:cdmlib|f8c23aa7bed4470dc98635a7880dee45456979e0.
- 12:17 PM Revision 8480c302 (cdmlib): cleanup
- 12:17 PM Revision f8c23aa7 (cdmlib): fix #7429 improving verbatim time period parsing
- 11:57 AM task #7607 (Closed): TypeDesignationSetManager: remove brackets from type representations
- 11:57 AM task #7607 (Resolved): TypeDesignationSetManager: remove brackets from type representations
- Applied in changeset commit:cdmlib|223a5fd3159ad97f0742a2baf1e9c594bb454fd1.
- 11:55 AM task #7607 (Closed): TypeDesignationSetManager: remove brackets from type representations
- Type representations are currently enclosed in brackets:
"*Type: Tanzania, United Republic of, River Baka, Konde-L... - 11:57 AM Revision 223a5fd3 (cdmlib): fix #7607 TypeDesignationSetManager: types without enclosing brackets
- 11:56 AM bug #7593: Vaadin Layout Section Drop down
- Wäre eine pragmatische Idee, ich müsste aber schauen, ob das praxisgerecht ist.
Mit Hinblick auf den Bulk-Editor,... - 11:48 AM bug #7593: Vaadin Layout Section Drop down
- das ist ein anderes problem und hat mit zu langen titeln in der Auswahlliste zu tun. Vielleicht sollten wir die maxim...
- 11:42 AM bug #7593: Vaadin Layout Section Drop down
- Der Fehler tritt noch bei "New Registration" im drop down von "Choose from existing publications" auf. Das Bild in m...
- 11:25 AM bug #7593: Vaadin Layout Section Drop down
- bitte nochmal testen, jetzt ist der server up to date.
- 11:45 AM bug #7505 (Closed): IllegalStateException: Multiple representations problem when adding Annotation to name in NameBulkEditor
- I could no longer reproduce this issue. I am closing the ticket therefore.
- 11:30 AM Revision 109968f7 (cdm-dataportal): ref #7605 removing trailing space from tagged text markup
- 11:08 AM bug #7606 (Duplicate): compact display of CDM Point data
- Point data like the exact location in gathering events should be displayed in a compact form including the
* sexa... - 10:51 AM Revision 2228f46b (cdm-dataportal): supressing 'collecting areas' label when not data is to be shown
- 10:44 AM bug #6563: Display altitude, distance to Ground and watersurface correct handling of freetext
- Applied in changeset commit:cdm-dataportal|dbc2bfa999e320fefb994358f70c28a612ee2f10.
- 09:33 AM bug #6563 (Resolved): Display altitude, distance to Ground and watersurface correct handling of freetext
- Reopen for review as the freetext issue is not covered by #7578.
(Also I would prefer "Duplicate", not "Rejected"... - 10:44 AM Revision dbc2bfa9 (cdm-dataportal): fix #6563 perferring freetext over atomized min max valued and removing useless Error value handling
- 10:31 AM bug #7542: Move synonym of homotypical group to taxon does not move the homotypical group correctly
- Applied in changeset commit:taxeditor|f210d45341a085e74c27ab2eadb0dedb9c9c7ae2.
- 10:25 AM Revision f210d453 (taxeditor): fix #7542: the current taxon should not be selectable for moveSynonym to another accepted taxon
07/30/2018
- 09:56 PM bug #7555: TaxonServiceImpl.findTaxaAndNames() broken for cichoriae searching for "Lapsana communis"
- By the way, on production I got 21 results, on test only 20 (with the above tests) so data might have slightly changed.
- 09:53 PM bug #7555 (Feedback): TaxonServiceImpl.findTaxaAndNames() broken for cichoriae searching for "Lapsana communis"
- I can reproduce this on production with the given URL, but I can NOT reproduce on
* test: http://test.e-taxonomy... - 07:14 PM task #7596: PhycoBank Portal - Formatting
- Hallo Henning,
zu 7)
Diese Klammern kann ich probelmlos entfernen, sie werden derzeit nur bei phycobank spezifi... - 06:40 PM bug #7538: Concurrent editing transaction strategy: Taxon turned into synonym by other user prior to saving taxon which was modified in editor
- Andreas Kohlbecker wrote:
> **NOTE:** A general problem or caveat of the data in the audit tables are lacking a time... - 06:12 PM bug #7538: Concurrent editing transaction strategy: Taxon turned into synonym by other user prior to saving taxon which was modified in editor
- Patrick Plitzner wrote:
> This could also be related to the same problem of concurrent editing:
>
> "...mal wiede... - 06:39 PM bug #7605 (Closed): harmonize cdm_tagged_text_to_markup() with tagged text strategy in cdmlib
- 06:39 PM bug #7605 (Resolved): harmonize cdm_tagged_text_to_markup() with tagged text strategy in cdmlib
- Applied in changeset commit:cdm-dataportal|0f129a6f839fddb958d1217ddaa1bd8319b06991.
- 06:37 PM bug #7605 (Closed): harmonize cdm_tagged_text_to_markup() with tagged text strategy in cdmlib
- see `eu.etaxonomy.cdm.strategy.cache.TaggedCacheHelper` for reference impelmentations
- 06:39 PM Revision 0f129a6f (cdm-dataportal): fix #7605 fixing probelms with space around separators by hamonizing with cdmlib reference implementation
- 06:36 PM feature request #7604 (New): Add user to AuditEvent
- Especially for delete events it is difficult to find out **who** did run the event as created_by and updated_by is al...
- 06:24 PM bug #7505: IllegalStateException: Multiple representations problem when adding Annotation to name in NameBulkEditor
- What is the current state here? For the release we should revert to non parallel loading I think as there are a coupl...
- 05:52 PM bug #7602 (Closed): reference page: proper formating of taxonnames in registration summries
- 05:51 PM bug #7602 (Resolved): reference page: proper formating of taxonnames in registration summries
- Applied in changeset commit:cdm-dataportal|afe99f4d4011a82f6232d6066b78d535321969df.
- 04:33 PM bug #7602 (Closed): reference page: proper formating of taxonnames in registration summries
- Name in registration summaries are rendered completely in italics even rank labels are italic
retrieve tagged titles... - 05:51 PM Revision afe99f4d (cdm-dataportal): fix #7602 expand TaggedText->entityReference objects
- 05:17 PM bug #7541: Insufficient rights lead to missing focus in name editor
- moved the second part of the description to a new ticket: #7603
- 05:12 PM bug #7541: Insufficient rights lead to missing focus in name editor
- we should urgently address the rights issues in taxeditor. Otherwise soon all users that should have limited rights w...
- 05:15 PM bug #7603 (Closed): Changing a user group does not work as expected
- Copied from #7541:
Da gleich der nächste Bug: Wenn man im Person Editor bereits eine Gruppe zugeordnet hatte (in d... - 04:47 PM bug #7537: Taxeditor can not connect to restarted, added cdm instance
- Not sure if this is really a taxeditor ticket. However, we should test (and fix it soon).
KL/PP can you please de... - 04:30 PM bug #7542: Move synonym of homotypical group to taxon does not move the homotypical group correctly
- Please also remove the current taxon from the search dialog.
Patrick, can you however to the review already for th... - 04:20 PM Revision 68f3553a (cdmlib): ref #7429 fixing test for verbatim time period parsing
- 04:05 PM bug #7601 (Closed): date published time period in reference page shows 'to' even if end date is missing
- 04:04 PM bug #7601 (Resolved): date published time period in reference page shows 'to' even if end date is missing
- Applied in changeset commit:cdm-dataportal|c0223d83af6fcd3403f41662078ab48d929bab1f.
- 01:24 PM bug #7601 (Closed): date published time period in reference page shows 'to' even if end date is missing
- 04:04 PM Revision c0223d83 (cdm-dataportal): fix #7601 fixing timeperiod with only start value
- 03:42 PM bug #7593: Vaadin Layout Section Drop down
- Fehler tritt im Test-System noch auf.
- 03:36 PM feature request #7594: RegistrationWorkingsetEditor click on new serveral times
- "new name" is meant.
After clicking on "new name" the system needs some time to open the next form/dialog. If the bl... - 10:05 AM feature request #7594 (Feedback): RegistrationWorkingsetEditor click on new serveral times
- can you please elaborate your request a bit more?
I don't quite understand which button you are referring to. The R... - 03:23 PM bug #7592: Search Button PhycoBank Test
- http://test.e-taxonomy.eu/dataportal/preview/phycobank/
Firefox
Seite vollständig geladen - 09:45 AM bug #7592 (Feedback): Search Button PhycoBank Test
- Ich habe keine Probleme mit dem Search-button-icon.
Wurde die Seite denn vollständig geladen oder war sie noch ni... - 01:55 PM Revision 842cca86 (cdmlib-apps): ref #7530 add activators for CaryoSppIdentifier import and WfoAccess import
- 01:53 PM feature request #7429 (In Progress): Improve parsing and formatting for VerbatimTimePeriod
- 01:51 PM Revision 18bfc099 (cdmlib): ref #7530 final changes for WfoAccess import
- 01:51 PM Revision 72bf1d96 (cdmlib): ref #7429 "verbatimDate" [realDate] format implemented for VerbatimTimePeriodParser
- 01:51 PM Revision 43234324 (cdmlib): ref #7530 latest changes to WfoAccess import
- 01:30 PM Revision fc169e34 (cdm-dataportal): ref #7599: add excluded fields for specimen
- 01:05 PM feature request #7600 (Closed): public setters for entity collections
- In model classes the setters for entity collections are protected or do not exist at all.
Only add*() and remove*() ... - 01:00 PM feature request #7599 (In Progress): treeView for specimen data in dataportal
- The current implementation provides all specimen with the whole tree with the first WS call, is it better to get firs...
- 12:37 PM feature request #7599 (Closed): treeView for specimen data in dataportal
- The specimen tab/page section should show the tree structure of the specimen. To avoid performance problems the data ...
- 12:47 PM Revision ff21181c (cdmlib): mend
- ref #7599: minor
- 12:46 PM Revision abfe22d1 (cdmlib): ref
- 12:42 PM Revision 98262d29 (cdm-dataportal): code cleaning
- 10:27 AM feature request #7595: PhycoBank Portal - Order Reference name
- please review
- 10:23 AM feature request #7595 (Resolved): PhycoBank Portal - Order Reference name
- Applied in changeset commit:cdm-dataportal|84e766b2d336588cb073dab03de2f547ac3f16c6.
- 10:23 AM Revision 84e766b2 (cdm-dataportal): fix #7595 swapping position of registration summary and citation in pegistraion page
- 09:28 AM feature request #7598 (New): Grouping of Restrictions implemented
- Since solving #7590 it is possible to logically combine Restrictions by AND and OR. To allow for really flexible sear...
- 09:07 AM Revision e0e9bffb (taxeditor): ref #7597 Add taxon description aggregation context menu entry
- 09:05 AM Revision 22a0c719 (cdmlib): ref #7597 Refactor aggregation method + add taxon aggregation method
07/27/2018
- 09:11 PM bug #7593 (Duplicate): Vaadin Layout Section Drop down
- this is rather a duplicate of #7593 than a subtask
- 11:21 AM bug #7593 (Duplicate): Vaadin Layout Section Drop down
- Drop down in Layout insert section not stable.
S.h. das Drop down Menue springt, wird breiter und schiebt damit das... - 09:10 PM bug #7591 (Closed): Vaadin Layout Reference new
- 09:09 PM bug #7591 (Resolved): Vaadin Layout Reference new
- Applied in changeset commit:cdmlib|6f6eaedfdbbc6c717dd37d2403ac60d7d09d0fb9.
- 10:51 AM bug #7591 (Closed): Vaadin Layout Reference new
- Layout-Problem Reference new
 - 09:09 PM Revision 6f6eaedf (cdmlib): fix #7591 ReferencePropertyDefinitions adding 'General' and using 'all' as default
- 04:09 PM Revision 1171c95a (cdmlib): ref #7597 Refactor aggregation method
- 04:09 PM Revision 5267abee (cdmlib): ref #7509 Add "computed" flag to description
- 04:09 PM Revision 683a6f90 (cdmlib): ref #7589 Improve description search when adding specimens to the matrix
- 04:09 PM Revision 94264387 (taxeditor): ref #7597 Adapt to refactored service method
- 03:26 PM feature request #7597 (Closed): Aggregate and persist descriptions on taxon level
- ~~The aggregation will be done on taxon level with already aggregated/computed descriptions.~~
as decided in the l... - 02:34 PM bug #7588 (Closed): ToOneRelatedEntityCombobox: edit button must not be enabled when value is null
- 02:19 PM task #7596: PhycoBank Portal - Formatting
- Achtung, automatische Nummerierung stimmt nicht mit Screenshot überein.
- 02:11 PM task #7596 (Closed): PhycoBank Portal - Formatting
- See screen shot below or (http://test.e-taxonomy.eu/dataportal/preview/phycobank/cdm_dataportal/reference/b2741740-7d...
- 02:12 PM feature request #7572 (Resolved): SpecimenTypeDesignationEditor: Collection combobox shows collection.code and collection.institution
- please review.
- 02:11 PM Revision 359c3906 (cdm-vaadin): ref #7572 two bug fixes
- 02:02 PM Revision 09a9df91 (cdm-vaadin): ref #7572 also searching the institute titleCache when looking up for collections
- 01:53 PM feature request #7590 (Resolved): findByTitleWithRestrictions allows combining Restrictions by OR
- 08:40 AM feature request #7590 (In Progress): findByTitleWithRestrictions allows combining Restrictions by OR
- 01:40 PM feature request #7595 (Closed): PhycoBank Portal - Order Reference name
- Change 1)in Reference 2) Name string to
1) Name string (2) in Reference
 - 11:47 AM feature request #7594 (Closed): RegistrationWorkingsetEditor click on new serveral times
- Vaadin Registration Workingset Editor
Click on "new name" starts a new name popup editor. The blue progressbar on ... - 11:15 AM Revision e9ad2b59 (cdmlib): ref #7590 documentation
- 10:56 AM bug #7592 (Closed): Search Button PhycoBank Test
- TestPortal PhycoBank, Firefox 61.0.1 (64-Bit)
Bug: icon for search not visible.
 - 10:49 AM Revision d6eb6115 (taxeditor): ref #4611 i18n character matrix
- 08:50 AM Revision c696d82c (cdmlib): ref #7590 replacing not flag in restrictions by AND_NOT and OR_NOT operators
- 08:50 AM Revision e0dcd1d7 (cdmlib): ref #7590 implementing AND and OR operator for restrictions and harmonizing code
07/26/2018
- 05:30 PM Revision 240bf2da (cdmlib): ref #7589 Delete taxon node from descriptive data set
- 05:30 PM Revision 897ab6d1 (cdmlib): Fix possible NoSuchElementException
- 05:30 PM Revision d445b8eb (taxeditor): ref #7589 Update message for missing nodes for descriptions
- 04:56 PM Revision 0d1a532b (taxeditor): Fix possible NPE
- 02:37 PM feature request #7572 (In Progress): SpecimenTypeDesignationEditor: Collection combobox shows collection.code and collection.institution
- 02:36 PM feature request #7572: SpecimenTypeDesignationEditor: Collection combobox shows collection.code and collection.institution
- The CdmFilterablePagingProvider is not yet including the institution titlecache in the search.
For this to impleme... - 02:35 PM feature request #7590 (Closed): findByTitleWithRestrictions allows combining Restrictions by OR
- see #7572#note-2 for details
- 02:34 PM Revision c10f70e4 (cdm-dataportal): first steps of specimen page with DTOs
- 02:13 PM bug #7588 (Resolved): ToOneRelatedEntityCombobox: edit button must not be enabled when value is null
- Applied in changeset commit:cdm-vaadin|2965ff8869dba39344151eee9da003154865dc48.
- 01:13 PM bug #7588 (Closed): ToOneRelatedEntityCombobox: edit button must not be enabled when value is null
- The edit button of the ToOneRelatedEntityCombobox is enabled even if the value is null.
- 02:13 PM Revision 2965ff88 (cdm-vaadin): fix #7588 updating buttons on setDataSource
- 01:40 PM Revision 78e01af4 (taxeditor): ref #7589 Use progress monitor client manager to load character data
- 01:36 PM feature request #7589: Performance, UX and stability patches for CharacterMatrix
- changes:
commit:taxeditor|b4f09ad3c826e81124053685a7d946a3c9b10778
commit:taxeditor|b5a4b38f8c40957ef909259004fa5... - 01:34 PM feature request #7589 (Closed): Performance, UX and stability patches for CharacterMatrix
- This ticket is for collecting all the changes done to improve the stability and performance and the user experience o...
- 01:04 PM Revision 8b405629 (cdmlib): Merge branch 'develop' into specimenPortal
- 01:02 PM Revision 592f88ca (cdmlib): minor
- 12:57 PM Revision 1104b973 (cdmlib): minor
- 12:54 PM Revision b0412410 (cdmlib): move getFieldUnits to findFieldUnits
- 12:27 PM Revision 6b53ead8 (cdmlib): first implementation for specimen page with DTOs
- 12:19 PM Revision 4855bbd5 (cdmlib): adding new SpecimenOrObservationType and smaller changes
- 11:48 AM bug #7366: TeamOrPersonField readonly if users lacks edit permissions
- setting the datasource to readonly as it was implemented for this issue was causing problems with the ToOneRelatedEnt...
- 11:47 AM bug #7586: com.vaadin.data.Property$ReadOnlyException on opening TypeSpecimenWorkingsetEditor
- This should be solved now!
- 11:41 AM bug #7586: com.vaadin.data.Property$ReadOnlyException on opening TypeSpecimenWorkingsetEditor
- for solving #7366 the datasource is set in `TeamOrPersonField.adaptToUserPermissions()` to readonly if the the lacks ...
- 08:07 AM bug #7586 (Resolved): com.vaadin.data.Property$ReadOnlyException on opening TypeSpecimenWorkingsetEditor
- Applied in changeset commit:cdm-vaadin|bbdd609fd9f9a504f0225c98ce01c8f4b19931f9.
- 08:05 AM bug #7586 (Closed): com.vaadin.data.Property$ReadOnlyException on opening TypeSpecimenWorkingsetEditor
- This ReadOnlyException is thrown when a user with insufficient privileges for editing the collector related to a Fiel...
- 11:46 AM Revision 9fec29e5 (cdm-vaadin): Revert "fix #7586 temporarily setting the datasource readOnly state to false when relpacing the loaded with the cached entity"
- This reverts commit bbdd609fd9f9a504f0225c98ce01c8f4b19931f9.
- 11:45 AM Revision e1aaf938 (cdm-vaadin): ref #7586 not setting datasource to readOnly when user lacks permissions
- 11:23 AM Revision eabaedb0 (cdmlib): smaller changes in ABCD import
- 10:09 AM Revision 0fdd8e68 (taxeditor): ref #4611 i18n character matrix
- 10:04 AM Revision d766bf95 (taxeditor): User service method to remove description from DescriptiveDataSet
- 10:02 AM Revision e8756d0b (cdmlib): Remove description from DescriptiveDataSet during deletion
- 10:02 AM Revision aeaef606 (cdmlib): Fix dataset removal method (possibly copy&paste error)
- 08:21 AM task #7587 (New): ToOneRelatedEntityReloader to listen and operate on PropertyDatasources directly?
- This idea came up while working on #7586.
Currently the `ToOneRelatedEntityReloader` is attached as `ValueChangeLi... - 08:07 AM Revision bbdd609f (cdm-vaadin): fix #7586 temporarily setting the datasource readOnly state to false when relpacing the loaded with the cached entity
07/25/2018
- 07:28 PM Revision 8c8c78f4 (cdm-vaadin): avoide setting the readonly suffix multiple times
- 07:18 PM task #7573 (Closed): CollectionPopEditor superCollection only visible for advanced users
- 07:15 PM Revision 89292507 (cdmlib): ref #7573 adding AGTENTBASE to CdmPermissionClass and creating generic RoleProber
- 07:13 PM Revision eb75f8eb (cdm-vaadin): ref #7573 superCollection only visible for advanced users
- 04:48 PM bug #7585 (Closed): RegistrationCuratorRoleProbe does not only check the ROLE_CURATION
the check done in this class seems wrong:
~~~java
return a.equals(RolesAndPermissions.ROLE_CURATION)
...- 04:36 PM feature request #7572 (Resolved): SpecimenTypeDesignationEditor: Collection combobox shows collection.code and collection.institution
- Applied in changeset commit:cdm-vaadin|d7edf1e089bd6f3a63904f86bf6160aaa4d1839a.
- 04:36 PM Revision d7edf1e0 (cdm-vaadin): fix #7572 CollectionCaptionGenerator to show collection code and institution in comboboxes
- 04:21 PM feature request #7570: Institution editor implemented
- implemented with basic set of fields covering
* name
* code
* part of other institution
according to #7571 : ... - 04:19 PM feature request #7570 (Resolved): Institution editor implemented
- Applied in changeset commit:cdm-vaadin|90e5b45a71c8b48e029fbbbc5d0393022f0f041e.
- 04:19 PM feature request #7571 (Resolved): Collection editor has field to select and edit the institution
- Applied in changeset commit:cdm-vaadin|1faff10b568bf292fda37d44a8dd1502de16efcb.
- 04:18 PM Revision 1faff10b (cdm-vaadin): fix #7571 adding intitute field to collection editor
- 04:17 PM Revision 90e5b45a (cdm-vaadin): fix #7570 implementing intitution editor with basic set of fields
- 12:15 PM Revision c7936eb4 (cdm-vaadin): TaxonNameDTO code cleaning
- 12:15 PM Revision 54b04612 (cdm-vaadin): CdmEntityAdapterDTO - documentation
- 12:03 PM Revision fdeb8328 (cdm-vaadin): remaming CdmEntityDecoratorDTO to CdmEntityAdapterDTO
- 11:00 AM bug #7543: Name Editor does not auto-scroll during dragging
- this is not as easy as it seems, we need to write our own listener which listen on the mouse position and scrolls, wh...
- 08:26 AM feature request #7584 (New): Display unscary notification instead of "delete operation was abborded by the system" when related objects exist
- The error box which is currently shown after the attempt to delete a cdm entity which is still used by other entities...
- 07:58 AM bug #7583 (Resolved): NPE on logout in registration list view
- Applied in changeset commit:cdm-vaadin|10d75c612b4f8c6a2fed7ebe8f402d18917af536.
- 07:57 AM bug #7583 (Closed): NPE on logout in registration list view
…und beim Logout:
~~~~
com.vaadin.server.ServerRpcManager$RpcInvocationException: Unable to invoke method click...- 07:58 AM Revision 10d75c61 (cdm-vaadin): fix #7583 adding null check for authentication
07/24/2018
- 06:17 PM feature request #7551 (Closed): TypeDesignationSetManager provides summary as TaggedText
- 06:15 PM feature request #7551 (Duplicate): TypeDesignationSetManager provides summary as TaggedText
- duplicate of #7348
- 06:13 PM bug #6695 (Closed): module cdmlib/services should not be an osgi bundle
- 06:13 PM bug #6695: module cdmlib/services should not be an osgi bundle
- this has been solved by adding the following pluginExecution configuration to cdmlib/lifecycle-mapping-metadata.xml w...
- 06:06 PM bug #7358 (Closed): Show warning when browser history back is used while popup editors are open
- 06:05 PM bug #7358 (Resolved): Show warning when browser history back is used while popup editors are open
- Applied in changeset commit:cdm-vaadin|26e068777f74a5d5f07ac19a4ce727eecc16093d.
- 06:05 PM Revision 26e06877 (cdm-vaadin): fix #7358 stopping navigation and showing dialog when modal dialogs are open
- 05:15 PM Revision 5c3feb25 (taxeditor): Fix saving routine for descriptions
- 04:41 PM Revision d486cbb0 (cdm-vaadin): upgrading to vaadin 7.7.13
- 04:11 PM bug #7582 (Duplicate): prevent from creating empty registrations
- The RegistrationWorkinsetEditor leaves empty registrations in the database when a new 'typification only registration...
- 03:59 PM bug #7542: Move synonym of homotypical group to taxon does not move the homotypical group correctly
- please review
- 03:58 PM bug #7542 (Resolved): Move synonym of homotypical group to taxon does not move the homotypical group correctly
- Applied in changeset commit:cdmlib|eb95398b963a25d0d4d48bff12767dd4cd984de4.
- 03:59 PM Revision eb95398b (cdmlib): fix #7542: first remove synoným then add it to new accepted taxon to avoid orphan synonyms
- 03:44 PM Revision bd0b8f0e (taxeditor): Refactor categorical combo box creation
- 03:37 PM bug #6379 (Worksforme): specimens of lectotypes not shown in portal
- it seems as this has been fixed meanwhile.
- 03:20 PM feature request #7462 (Feedback): references in type footnotes are clickable links
- is this still needed with the new registration page?
- 03:15 PM feature request #7581 (New): TaxonNamePopEditor: support for editing of all name relationships
- Currently the TaxonNamePopEditor allows editing of basionyms, and of validations as well as replaced synonyms.
The... - 02:53 PM feature request #7580 (In Progress): User wishes: CharacterMatrix
- * enter values in multiple cells simultanously
* copy&paste cell value (maybe via dragging) - 02:49 PM bug #7579 (New): Set up pipelines in Jenkins to replace the build pipelines
- Our jenkins setup are using the [build-pipeline-plugin](https://plugins.jenkins.io/build-pipeline-plugin).
Since J... - 02:41 PM bug #7578: preseve null values in all mesurements during serialization of webservice responses
- review by checking the example record here: http://test.e-taxonomy.eu/dataportal/preview/cichorieae/cdm_dataportal/ta...
- 02:38 PM bug #7578 (Resolved): preseve null values in all mesurements during serialization of webservice responses
- Applied in changeset commit:cdmlib|d9f51acb041832197601f3343f4d3f6fd777b888.
- 02:38 PM Revision d9f51acb (cdmlib): fix #7578 DefaultValueProcessor to serialize all null numbers as null
- 02:31 PM Revision b5a4b38f (taxeditor): Fix possible multi rep exception by not saving description separately
- 11:10 AM Revision 448cb0ea (taxeditor): ref #7575 Fix initial creation of Quantitative Data in cell editor
- 09:12 AM Revision c088e4b3 (cdmlib): ref #7223 add in null case to ReferencePropertyDefinitions to provide all possible fields
07/23/2018
- 06:20 PM Revision c31186f9 (taxeditor): ref #7575 Remove toggle button
- 06:18 PM Revision 08180809 (taxeditor): ref #7575 Label update for quantitative data
- 06:07 PM Revision aba1b9d9 (taxeditor): ref #7575 Merge aggregated and exact value cell editor
- 06:02 PM Revision b4f09ad3 (taxeditor): Use service method to find a description for a dataset
- 06:02 PM Revision d49e88fa (cdmlib): Add service method to find a description for a dataset
- 03:10 PM Revision 2d3d6556 (cdm-dataportal): base rank slecction with null option
- 01:10 PM bug #6563 (Rejected): Display altitude, distance to Ground and watersurface correct handling of freetext
- Rejecting this issue as only the symptom is described here.
The actual cause is false serialization of Double value... - 01:08 PM bug #7578 (Closed): preseve null values in all mesurements during serialization of webservice responses
- as reported in #6563 the double values which are `null` are serialized as `0.0` by json-lib this is plain wrong for a...
- 12:20 PM bug #7577: Set Publish Flag for Subtree Dialog - Further Problems with Progressmonitor
- In the end the cdm-remote instance crashed with a `java.lang.OutOfMemoryError: Java heap space` even if it has been s...
- 12:18 PM bug #7577: Set Publish Flag for Subtree Dialog - Further Problems with Progressmonitor
- A anylysis of the staktrace kane with jstack revels that it is `hibernate.search` taking all the CPU in order to inde...
- 11:52 AM bug #7577: Set Publish Flag for Subtree Dialog - Further Problems with Progressmonitor
- I tested again.
This time I set the publish flag to true, all taxa an synonmys intially are publish = false:
... - 10:41 AM bug #7577 (New): Set Publish Flag for Subtree Dialog - Further Problems with Progressmonitor
Summarizing the insights from this examination I come to the conclusion that we need to work on the following:
1...- 10:41 AM bug #7576 (Feedback): Set Publish Flag for Subtree Dialog - Problems with Progressmonitor
- 10:34 AM bug #7576: Set Publish Flag for Subtree Dialog - Problems with Progressmonitor
- Hallo Katja,
ich weiß, dass du an diesem Problem gearbeitet hast, konnte aber kein Ticket dazu finden. Daher habe ... - 10:30 AM bug #7576 (Closed): Set Publish Flag for Subtree Dialog - Problems with Progressmonitor
- Setzen des Publish-Flags auf der kompletten Cichorienklassifikation:
Die Prozentanzeige bleibt bei 54.95% stehen ... - 10:11 AM Revision 6e927caf (taxeditor): ref #7575 small layout changes
- 10:09 AM Revision bd814ea2 (cdm-dataportal): removing cdm_rankVocabulary_as_option() and replacing all usages by the general methdod
- 08:31 AM Revision 67f32f09 (cdm-dataportal): renaming specimen_detivate_hierarchy_table to specimen_table and updating documentation
07/20/2018
- 10:06 PM Revision e2da4a33 (cdm-vaadin): ref #7223 improving the layout for all reference types by implemetning a real adaptive layout
- 06:17 PM Revision 7c3f1a46 (taxeditor): ref #7575 Add toggle button for aggregated/exact quant data editing
- 05:50 PM Revision a42acd70 (taxeditor): ref #7575 Refactor label accumulation
- 05:42 PM bug #7557 (Resolved): TaxonNamePopEditor: com.vaadin.data.Property$ReadOnlyException on saving a sub popup editor
- 05:42 PM bug #7557 (Feedback): TaxonNamePopEditor: com.vaadin.data.Property$ReadOnlyException on saving a sub popup editor
- I can no longer reproduce this issue since #7574 is fixed.
Henning, please try be yourself to reproduce this bug. ... - 11:31 AM bug #7557: TaxonNamePopEditor: com.vaadin.data.Property$ReadOnlyException on saving a sub popup editor
- [another report of the same bug:]
Lieber Andreas,
http://test.e-taxonomy.eu/cdmserver/phycobank_production/a... - 05:34 PM bug #7574: IllegalStateException: Multiple representations ... when saving ReferenceEditor with in Reference ...
- I hope and think that this issue is finally fixed now.
please review. - 05:07 PM bug #7574 (Resolved): IllegalStateException: Multiple representations ... when saving ReferenceEditor with in Reference ...
- Applied in changeset commit:cdm-vaadin|1641827e91d78dc483e225d1265e88d317e5d981.
- 01:06 PM bug #7574 (Closed): IllegalStateException: Multiple representations ... when saving ReferenceEditor with in Reference ...
- IllegalStateException: Multiple representations when saving ReferenceEditor with in Refercence
This happens when c... - 05:27 PM bug #7558 (Duplicate): IllegalStateException: Multiple representations ... when saving first typeDesignation for nameless Registration
- resolved also through the changes made for #7574, so this is clearly a duplicate
- 05:25 PM Revision 4f0afd36 (cdm-vaadin): navigating to RegistrationStart after Reference deletion in empty registration sets
- 05:09 PM Revision cd661671 (cdm-vaadin): removing useless select clean
- 05:08 PM Revision 46b6ab50 (cdm-vaadin): removing old commented code
- 05:07 PM Revision 1641827e (cdm-vaadin): fix #7574 adding the ToOneRelatedEntityReloader to the TeamOrPerson and Person field directly
- 02:43 PM Revision d12e0f5d (taxeditor): ref #7575 Enable quantitative dialog cell editor
- 01:11 PM Revision b119ef11 (taxeditor): ref #7575 Add (still disabled) quantitative dialog cell editor
- 01:10 PM feature request #7575 (Closed): Implement advanced quantitative cell editor
- Editor should have two states:
* Edit a list of exact values
* edit aggregated values like min, max, etc.
Impr... - 12:08 PM task #7573 (Closed): CollectionPopEditor superCollection only visible for advanced users
- super collection field only visible for selected users (Role=CURATOR|ADMIN)
First of all can the concept of the su... - 12:02 PM feature request #7572 (Closed): SpecimenTypeDesignationEditor: Collection combobox shows collection.code and collection.institution
- this is required because ...
Fall 3: Es gibt einen Code, der identisch mit einen Index Herbariorum Code ist (NWU) ... - 12:00 PM feature request #7571 (Closed): Collection editor has field to select and edit the institution
- Wenn alle Institutionen einen Code haben, ist alles fein.
Normaler Weise gibt es 3 Fälle:
Fall 1: Code nac... - 11:58 AM feature request #7570 (Closed): Institution editor implemented
- An InstitutionPopupEditor is urgently needed for Collection and also important for References
- 10:54 AM feature request #7569: SpecimenTypeDesignationEditor: Typedesignations should be ordered
- fixed and ready for review.
- 10:53 AM feature request #7569 (Resolved): SpecimenTypeDesignationEditor: Typedesignations should be ordered
- Applied in changeset commit:cdm-vaadin|6055cbe049e1e8d7db866c07419c26f705acb5f8.
- 10:52 AM feature request #7569 (Closed): SpecimenTypeDesignationEditor: Typedesignations should be ordered
- [requested by Henning]:
Anfrage zur Sortierung der Typen:
Zeitlich und logisch gebe ich zuerst den Lectotypus an,... - 10:53 AM Revision 6055cbe0 (cdm-vaadin): fix #7569 ordering typedesignations in workingset by type
- 10:28 AM bug #7566 (Resolved): TeamOrPersonField: some Persons can not be selected
- 08:34 AM bug #7566: TeamOrPersonField: some Persons can not be selected
- These problems are related to the changes made for #7535
The root cause is the code line
~~~java
private v... - 10:18 AM bug #7567 (Duplicate): SpecimenTypeDesignationEditor: Collection selection only set at second select action
- duplicate of #7566
- 10:14 AM bug #7568 (Closed): SpecimenTypeDesignationEditor: Collector Field not following the readonly state of the editor.
- 10:13 AM bug #7568 (Resolved): SpecimenTypeDesignationEditor: Collector Field not following the readonly state of the editor.
- Applied in changeset commit:cdm-vaadin|7278c990f5a49dd1a0fd17d9cd705717cfd4279f.
- 08:56 AM bug #7568 (Closed): SpecimenTypeDesignationEditor: Collector Field not following the readonly state of the editor.
- 10:13 AM Revision 7278c990 (cdm-vaadin): fix #7568 Collector Field readlony when editor is readonly
- 08:41 AM Revision 1fc42b13 (cdm-vaadin): ref #7566 solving problem with unselectable entities due to eagerly selection clearing in updateToolBarButtonStates()
07/19/2018
- 06:09 PM bug #7567 (Duplicate): SpecimenTypeDesignationEditor: Collection selection only set at second select action
- reported by Hening:
Auswahl wird beim ersten Auswählen nicht angenommen, erst nach 2. Auswahl. - 06:05 PM Revision 99529ce3 (cdm-vaadin): ref #7566 using the COLLECTOR_TITLE for the collector combobox
- 06:03 PM bug #7566: TeamOrPersonField: some Persons can not be selected
- I found one minor issue while investigating this: The NOMENCLATURAL_TITLE was being used for the caption of the coll...
- 05:51 PM bug #7566 (Closed): TeamOrPersonField: some Persons can not be selected
- This issue only occurs with some few Persons:
[originally reported by Hennig]
Folgende Eingabeprobleme im speci... - 05:15 PM Revision 098b6358 (cdm-dataportal): ref #7494 registration search filter layout improvements
- 05:05 PM Revision e6409ceb (cdm-dataportal): ref #7496 fixing erroneous acive state of tree items when in search registration page
- 04:52 PM Revision b49c60b7 (cdm-dataportal): ref #7494 fixing form action url in search registration block
- 04:37 PM feature request #7496: TaxonNodes in cdm_taxontree can either link to taxon or reference search result pages
- implemented and ready for testing
- 04:37 PM feature request #7496 (Resolved): TaxonNodes in cdm_taxontree can either link to taxon or reference search result pages
- Applied in changeset commit:cdm-dataportal|8a4d078dfa6e2200f5e4b25c28d1bdcb7d82cf7b.
- 04:37 PM Revision 8a4d078d (cdm-dataportal): fix #7496 cdm_taxontree can either link to taxon or reference search result pages
- 03:55 PM Revision a3228c59 (cdm-dataportal): ref #7565 marking all code to be removed with comments
- 03:51 PM Revision 7ac8c744 (cdm-dataportal): ref #7565 marking all code to be removed with comments & ref #7496 fixing cdm_taxontree_block_configure()
- 03:47 PM task #7565 (New): cdm_taxontree remove all code for using the tree to browse drupal term taxonomies
- The cdm_taxontree has been developed to provide dual use:
1. Browse cdm classifications
1. Browse drupal term t... - 03:25 PM bug #6356: taxontree sort order as in editor
- no longer important for phycobank since we will model the classification with taxon relations
- 03:14 PM feature request #7494: RegistrationSearch implemented
- Implemented, please test. There are two ways to perform a search:
1. go to the registration search directly http:/... - 03:08 PM task #7561 (Closed): OccurrencePortalController and FieldUnitDTO should not allow passing the determintation, associated name as argument
- all done!
- 03:06 PM feature request #6967 (Closed): RegistrationController identifier endpoints implemented
- complete!
- 03:05 PM feature request #7348 (Closed): RegistrationDTO webservices implemented
- complete!
- 11:43 AM feature request #7348: RegistrationDTO webservices implemented
- Andreas Kohlbecker wrote:
> **TODO:**
>
> remove the following fields from DTO Serialization:
>
> * `typeDesi... - 03:05 PM Revision 810710a0 (cdm-dataportal): ref #7494 registration search block can be used on any page
- 02:58 PM bug #7564 (Closed): remove Phycobank - Registration data - block and other outdated registration code
~~also remove `render_registrations()` in name.inc?~~ need to keep this method since it is used in reder_taxon_or_n...- 02:43 PM task #7562 (Resolved): Specimen table "Associated with" taxon is irritating and needs to be removed, replaced
- Hallo Norbert,
nach Rücksprache mit Patrick habe ich erfahren, dass die Anforderung das "assoziierte" Taxon bei de... - 02:13 PM bug #7563 (In Progress): requests with %2F in URL are rejected by apache
- 02:00 PM bug #7563 (Closed): requests with %2F in URL are rejected by apache
- requests like http://test.e-taxonomy.eu/cdmserver/phycobank_production/registrationDTO/identifier/http%+3+A%2F%2Fphyc...
- 12:09 PM feature request #7495 (Resolved): Registration page implemented
- ready for the review
- 12:05 PM Revision 2a14e5d9 (cdm-dataportal): ref #7348 margin to separate items in the registrationWorkingSet
- 11:37 AM Revision 5e4cae59 (cdm-dataportal): ref #7495 bug fix
- 10:54 AM Revision 29cfa0a7 (cdmlib): ref #7348 implementing registrationWorkingSet service endpoint and harmonizing logging
- 10:52 AM Revision 828a0c8c (cdm-dataportal): code cleaning and adding missing doc
- 10:39 AM Revision 6cbefddc (cdm-dataportal): ref #7495 reference page lists registrations
- 08:29 AM Revision eec520d3 (cdmlib): ref #7561 removing associated name and protologue from OccurrencePortalController and FieldUnitDTO
- 08:28 AM Revision cdf0f80b (cdmlib): ref #7348 ordering registrations by identifier
- 08:26 AM Revision afedac7e (cdmlib): ref #7348 stripping .json and .xml from reguest urls
- 08:20 AM Revision db725031 (cdm-dataportal): ref #7495 Registration page implemented
07/18/2018
- 09:38 PM bug #7554 (Closed): TeamOrPersonField: removing existing team and adding new team leaves nested components buttons in disabled state
- Thank you for reviewing. I will close this issue now.
- 06:44 PM bug #7554 (Worksforme): TeamOrPersonField: removing existing team and adding new team leaves nested components buttons in disabled state
- New multiauthor teams consisting of existing and new authors can be built without errors.
- 04:45 PM bug #7554 (Resolved): TeamOrPersonField: removing existing team and adding new team leaves nested components buttons in disabled state
- 04:45 PM bug #7554: TeamOrPersonField: removing existing team and adding new team leaves nested components buttons in disabled state
- With the last commit I no longer can reproduce any of the issues described in this ticket.
Please review. - 07:11 PM Revision 1e87f89f (cdm-dataportal): ref #7495 extracting derivate_hierarchy_table creating as compose method
- 06:03 PM task #7561 (In Progress): OccurrencePortalController and FieldUnitDTO should not allow passing the determintation, associated name as argument
- 04:50 PM task #7561: OccurrencePortalController and FieldUnitDTO should not allow passing the determintation, associated name as argument
- Point 1) in this issue description was also raised for the data_portal in #6816 as point 4). The "Associated with" in...
- 03:45 PM task #7561 (Closed): OccurrencePortalController and FieldUnitDTO should not allow passing the determintation, associated name as argument
- The OccurrencePortalController allows requests of the form `/portal/occurrence/{uuid}/derivateHierarchy?uuid={taxonUu...
- 05:34 PM Revision 09f028e2 (cdm-dataportal): ref #7562 removing "Associated with" name from Specimen table
- 05:23 PM Revision c9e72155 (cdm-dataportal): adapting test base class to changes to the search result list made in 6789eff
- 05:13 PM bug #6816 (Closed): [Dataportal] Specimen table issues
- For me the issue raised in point 4) is not solved or answered satisfyingly. I stumbled over this in the attempt to us...
- 04:59 PM task #7562 (Closed): Specimen table "Associated with" taxon is irritating and needs to be removed, replaced
- see issues #6816, #7561 for older information on this.
- 04:45 PM Revision d7780a19 (cdm-dataportal): adapting test base class to changes to the search result list made in 6789eff
- 04:29 PM Revision 9cd8700e (cdm-vaadin): ref #7547 ref #7554 list entry buttons enablement uses sharedState.readonly and ignores datasource readonly
- 04:16 PM bug #7547: ToManyRelatedEntitiesComboboxSelect buttons enabled even if the containig editor is readOnly
- the changes for this ticket cause other problems: #7554
- 03:05 PM bug #7559 (Resolved): possibly corrupted hiberante session after previous error on saving editor
- clearing the session only after an exception seems to work by now.
Once it is confirmed that the session problems ... - 03:00 PM bug #7559 (Worksforme): possibly corrupted hiberante session after previous error on saving editor
- 02:23 PM bug #7559: possibly corrupted hiberante session after previous error on saving editor
- modified error handling: only clearing the session, no longer closing it in turn of errors commit:cdm-vaadin|a903034c
- 02:21 PM bug #7559: possibly corrupted hiberante session after previous error on saving editor
- Closing the session in turn of exceptions seems to cause other problems:
[reported by Henning]
Referenz „Ehrenb... - 03:02 PM bug #7560 (Worksforme): LazyInitializationException (LIE) saving TaxonNamePopupEditor caused during hibernate.search indexing
- This was caused by a change related to #7559 and was fixed with commit:cdm-vaadin|f53fffc
- 02:42 PM bug #7560 (Worksforme): LazyInitializationException (LIE) saving TaxonNamePopupEditor caused during hibernate.search indexing
~~~
[phycobank] 14:25:46,718 ERROR [qtp759156157-24][eu.et.va.mv.AbstractPopupEditor] - org.springframework.orm.hi...- 02:59 PM Revision f53fffc6 (cdm-vaadin): ref #7559 clearing of the hibernate session only after exceptions, no more session close or clearing after any save operation in the cdmstore
- 02:17 PM Revision a903034c (cdm-vaadin): ref #7558 clearing only of the hibernate session after exceptions, no more session close
- 02:09 PM Revision 68eab158 (taxeditor): ref #7549 Add min and max data series to quant data chart
- 11:30 AM Revision f563ed61 (taxeditor): ref #4611 i18n feature tree editor
- 11:01 AM Revision 021883d9 (taxeditor): code cleanup
Also available in: Atom