Activity

From 07/16/2018 to 08/14/2018

08/14/2018

06:54 PM feature request #7655 (Duplicate): References Editor: book section offers title field: References Editor: A book section does not provide a title field, yet.
External users might miss this.
Workaround... Wolf-Henning Kusber
06:51 PM feature request #7654 (Duplicate): New registration page existing publications combobox does 'begins with search' on author names: The search on bibliographic authors is a full text search.
Example "Lange-Bert" (see screen shot) is searching for t... Wolf-Henning Kusber
04:41 PM feature request #7648: Create taxonrelation to genus or species when subordinate names are created: Also after import of new higher classifications we need to attache subgeneric taxa to their according taxa in bulk.
... Andreas Müller
04:38 PM feature request #7648: Create taxonrelation to genus or species when subordinate names are created: Andreas Kohlbecker wrote:
> When creating a species a new Taxon needs to be created for this species and the new tax... Andreas Müller
04:26 PM feature request #7653: [DISCUSS] Delete NameFacts => Result: no: WGB:
ich sehe da eine Reihe von Anwendungen für Namens-bezogene Fakten:
* ~~Etymologie – ist ganz allgemein wie ein... Andreas Müller
10:25 AM feature request #7653: [DISCUSS] Delete NameFacts => Result: no: AM:
upps, das ist mir vollständig neu, dass für Namen über den Bulkeditor auch (Name-)facts editiert werden können... Andreas Müller
10:23 AM feature request #7653 (Closed): [DISCUSS] Delete NameFacts => Result: no: NameFacts are currently very rarely used except for protologues. Protologues will be handled with nomenclatural sourc... Andreas Müller
09:49 AM feature request #7281 (Closed): Implement bromelian import: Katja Luther
09:46 AM bug #7638 (Resolved): problem with media data missing meta data: Katja Luther
09:42 AM bug #7614 (Closed): IndexOutOfBoundsException after deleting in bulkeditor: works fine now and the code seems to be correct. Katja Luther
09:12 AM feature request #7652 (New): add possibility to delete only the taxon node and keep the taxon in taxon navigator: Katja Luther

08/13/2018

11:02 PM task #7651 (New): RegistrationManager implemented: The commit:6ed17427 which was made for #7622 contains business logic which was placed in the RegistrationService for ... Andreas Kohlbecker
10:57 PM task #7650 (New): RegistrationFactory implemented: The commit:6ed17427 which was made for #7622 contains factory methods (at least one) which were placed in the Registr... Andreas Kohlbecker
07:21 PM bug #7622: RegistrationWorkingsetEditor: navigating to other pages with fresh registrations leaves empty registrations in the system: Updating the subject to better reflect the cause Andreas Kohlbecker
05:21 PM feature request #6682: Formatter and DTO for taxon relationships (e.g. misapplied names): This should rather be a formatter for concept relations and a new DTO service in remote. Andreas Müller
04:34 PM bug #7649 (Closed): Term editor loads/saves extremely slow: Walter:
"Der Term Editor braucht extrem lange, um aufzugehen – macht nichts, aber könnte ja sein, dass da etwas n... Patrick Plitzner
04:31 PM feature request #6321: Implement parallel loading + progress bar for loading objects into the bulk editor: Patrick Plitzner wrote:
> Andreas Müller wrote:
> > when testing a couple of times I got an EagerLoadingException c... Andreas Müller
04:20 PM feature request #6321: Implement parallel loading + progress bar for loading objects into the bulk editor: Andreas Müller wrote:
> when testing a couple of times I got an EagerLoadingException caused by an NoHttpResponseExc... Patrick Plitzner
03:26 PM feature request #6321: Implement parallel loading + progress bar for loading objects into the bulk editor: Andreas Müller wrote:
> When running a search and stopping it by running a new search the results of the first searc... Patrick Plitzner
04:30 PM bug #7614 (Resolved): IndexOutOfBoundsException after deleting in bulkeditor: Patrick Plitzner
04:29 PM bug #7614: IndexOutOfBoundsException after deleting in bulkeditor: There are cases when -1 is returned as the current row index. This is now caught before getting the element at the in... Patrick Plitzner
04:05 PM bug #7555: TaxonServiceImpl.findTaxaAndNames() broken for cichoriae searching for "Lapsana communis": Also an issue for Nepenthes ampullaria
http://caryophyllales.org/nepenthaceae/cdm_api/proxy/http%253A%252F%252Fap... Andreas Müller
01:33 PM bug #7555 (Resolved): TaxonServiceImpl.findTaxaAndNames() broken for cichoriae searching for "Lapsana communis": please review Andreas Kohlbecker
01:32 PM bug #7555: TaxonServiceImpl.findTaxaAndNames() broken for cichoriae searching for "Lapsana communis": fixed in commit:0d70754 Andreas Kohlbecker
01:29 PM bug #7555: TaxonServiceImpl.findTaxaAndNames() broken for cichoriae searching for "Lapsana communis": also reported by walter
http://caryophyllales.org/nepenthaceae/cdm_api/proxy/http%253A%252F%252Fapi.cybertaxono... Andreas Kohlbecker
03:20 PM feature request #7648 (Resolved): Create taxonrelation to genus or species when subordinate names are created: When creating a species a new Taxon needs to be created for this species and the new taxon needs to be related to the... Andreas Kohlbecker
02:28 PM feature request #7506 (Duplicate): Allow direct editing bulk editor: Patrick Plitzner
02:27 PM feature request #7518: remaining issues for usage of NatTable for bulkeditor: Andreas Müller wrote:
> The following comment was missing when the ticket was copied from #7439: "Additionally offer... Patrick Plitzner
01:17 PM feature request #4383: multiple issues with de-duplication of references in bibliography: Same or similar problem reported by Walter:
bei http://caryophyllales.org/nepenthaceae/cdm_dataportal/taxon/463255... Andreas Kohlbecker
01:09 PM task #3249 (Duplicate): [DISCUSS] Free text search for specimen details: this seems like a duplicate of #3223
The requirement details given in this issue are very campanula secific and co... Andreas Kohlbecker
01:04 PM bug #7645 (Closed): specimen admin preferences are not saved: works now Andreas Müller
09:53 AM bug #7645: specimen admin preferences are not saved: Applied in changeset commit:taxeditor|3935afdf45ef9ddc44850fab61cf53ba79125643. Katja Luther
09:45 AM bug #7645 (Resolved): specimen admin preferences are not saved: Andreas Müller
09:13 AM bug #7645 (Closed): specimen admin preferences are not saved: The specimen admin preferences are not in the database after clicking apply or OK. Katja Luther
01:03 PM bug #7647 (Resolved): accepted taxa also used as MAN or Pro Parte Synonym are displayed as MAN in details view: Katja Luther
01:02 PM bug #7647 (Closed): accepted taxa also used as MAN or Pro Parte Synonym are displayed as MAN in details view: Katja Luther
12:47 PM bug #6289: “Back to images” link as “Back to taxon page” when in table-less mode: Fixing this should be easy and quickly. Andreas Kohlbecker
11:58 AM feature request #6677: Add "hort." flag to Botanical names: AM:
ok, das heißt, hort. könnte eigentlich an allen 4 Stellen stehen (Kombinations- und Ex-Author, sowie auch als ... Andreas Müller
11:51 AM feature request #6677: Add "hort." flag to Botanical names: WGB:
im Stearn (4ed, 355) wird die Abkürzung „hort.“ als „hortorum, of gardens; hortulanorum, of gardeners“ defini... Andreas Müller
10:43 AM feature request #6677: Add "hort." flag to Botanical names: AM:
Hallo Walter,
ich glaube im Zuge des Nepenthes Imports bin ich irgendwann mal auf die Abkürzung „hort.“ ges... Andreas Müller
10:38 AM feature request #7646 (Closed): Implement parser and formatter for "hort.": as soon as #6677 is implemented Andreas Müller
09:51 AM feature request #7419 (Closed): Provide example NormalImplicit import file for phycobank higher taxon graph imports: I think we can close this ticket. Andreas Müller
09:30 AM feature request #7419: Provide example NormalImplicit import file for phycobank higher taxon graph imports: Why did you pass this issue to me? From reading the comments I got the impression that this issue is completed. I thi... Andreas Kohlbecker

08/10/2018

09:41 PM feature request #6321: Implement parallel loading + progress bar for loading objects into the bulk editor: Also got an NPE when deleting (and saving the delete) of a Reference. Maybe this is also related to parallel loading?... Andreas Müller
09:21 PM feature request #6321: Implement parallel loading + progress bar for loading objects into the bulk editor: Reloading after save and setting selection after save if selection is one of the later records in a huge dataset is s... Andreas Müller
09:17 PM feature request #6321: Implement parallel loading + progress bar for loading objects into the bulk editor: In name bulk editor changing e.g. specific epithet does NOT change the labels for "Name" and "Scientific name" and al... Andreas Müller
09:07 PM feature request #6321: Implement parallel loading + progress bar for loading objects into the bulk editor: when testing a couple of times I got an EagerLoadingException caused by an NoHttpResponseException. May the test serv... Andreas Müller
08:33 PM feature request #6321 (Feedback): Implement parallel loading + progress bar for loading objects into the bulk editor: When running a search and stopping it by running a new search the results of the first search are still (partly) avai... Andreas Müller
08:18 PM feature request #7429 (Closed): Improve parsing and formatting for VerbatimTimePeriod: Andreas Müller
08:11 PM feature request #7506 (Feedback): Allow direct editing bulk editor: To me this seems to be a duplicate for #7503. Can you please double check and if you agree close ticket as duplicate ... Andreas Müller
08:01 PM feature request #7518: remaining issues for usage of NatTable for bulkeditor: The following comment was missing when the ticket was copied from #7439: "Additionally offering tooltips saying that ... Andreas Müller
07:56 PM feature request #7518: remaining issues for usage of NatTable for bulkeditor: By the way, once we have >3 columns we will need horizontal scrolling anyway. So maybe this can already be implemente... Andreas Müller
07:49 PM feature request #7518 (Feedback): remaining issues for usage of NatTable for bulkeditor: * possibility to copy from a cell content
* this works now except for the fact that in editing mode the right cli... Andreas Müller
07:27 PM bug #7544 (Closed): Dragging a misapplication onto itself throws an exception in name editor: Disabling d&d seems to work. Advanced features copied to #7609 so we can close this ticket. Andreas Müller
07:15 PM bug #7603 (Closed): Changing a user group does not work as expected: As far as I understand the ticket this is fully fixed. Andreas Müller
02:27 PM task #7420: Import for higher taxon graph for phycobank: Andreas Müller wrote:
> What should be done with existing IAPT data. Should they be adapted to the new data model?
... Andreas Müller
02:23 PM task #7420: Import for higher taxon graph for phycobank: What should be done with existing IAPT data. Should they be adapted to the new data model? Andreas Müller
02:07 PM task #7420 (In Progress): Import for higher taxon graph for phycobank: First version of import is ready and tested with Frey and WoRMS data running into empty local database.
Next step:... Andreas Müller
02:03 PM feature request #7419 (Resolved): Provide example NormalImplicit import file for phycobank higher taxon graph imports: Wolf-Henning Kusber wrote:
> prefered: use a single excel sheet per classification
great, makes it easier Andreas Müller

08/09/2018

01:09 PM feature request #7419: Provide example NormalImplicit import file for phycobank higher taxon graph imports: prefered: use a single excel sheet per classification Wolf-Henning Kusber
01:02 PM feature request #7419 (Feedback): Provide example NormalImplicit import file for phycobank higher taxon graph imports: There seems to be an open issue: As we decided to create a classification for each reference and create a new taxon p... Andreas Müller
11:10 AM feature request #7419 (Resolved): Provide example NormalImplicit import file for phycobank higher taxon graph imports: As we have decided on the format and an example file exists as attachement to #7420 I think we can close this ticket. Andreas Müller
11:07 AM feature request #7643 (Feedback): cdmlight export: for bibliographic short citation use the freetext of the date as default: Andreas Müller
11:07 AM feature request #7643: cdmlight export: for bibliographic short citation use the freetext of the date as default: This will throw an NPE if datePublished does not exist!!
Also it is a bit dangerous as freetext in some cases may ... Andreas Müller
10:20 AM feature request #7643 (Resolved): cdmlight export: for bibliographic short citation use the freetext of the date as default: Katja Luther
10:19 AM feature request #7643 (Closed): cdmlight export: for bibliographic short citation use the freetext of the date as default: mail of WB:
noch ein Problemchen mit dem Output:
Nepenthes Datenbank – Da habe ich die folgende Referenz:
sieh... Katja Luther
11:03 AM feature request #7644 (Closed): Add "continued" flag to (Verbatim)Timeperiod: ... to indicate that a reference (usually a database) is continously edited and has no end date (yet).
E.g. Berend... Andreas Müller
10:44 AM task #7420: Import for higher taxon graph for phycobank: Please save future versions of the excel file in the current .xslx format, .xls is outdated. Andreas Müller
01:22 AM feature request #7640: Update ISO country names where necessary: This is not related to vaadin but a general cdm issue.
There are a couple of issues related to ISO 3166, many of t... Andreas Müller

08/08/2018

05:24 PM feature request #7642 (Rejected): PhycoBank Anzeige und Zugreifbarkeit von Basionymen in Vaadin (zur Diskussion): 100233
Für die Eingabe einer Umkomination musste ich die Literatur für das Basionym anlegen, um das Basionym einzuge... Wolf-Henning Kusber
03:47 PM feature request #7549 (Closed): Show tooltip for data aggregation in character matrix: Patrick Plitzner
03:39 PM feature request #7637 (In Progress): Handle intext references in CDM light: Andreas Müller
02:57 PM feature request #7637: Handle intext references in CDM light: the filter is implemented and is the default, with the configurator it is possible to configure, that needs to be imp... Katja Luther
02:28 PM feature request #7637 (In Progress): Handle intext references in CDM light: During cdm light export we may want to handle intext references correctly.
As a first step we simply should remove... Andreas Müller
03:32 PM bug #7639: SpecimenTypeDesignationEditor: Altitude not saved and displayed properly: Only the verbatim field functions, see 100123 Wolf-Henning Kusber
02:52 PM bug #7639 (Closed): SpecimenTypeDesignationEditor: Altitude not saved and displayed properly: Registration: 100118 ff.
Altitude: Input 1618
Save-> Display in Vaadin =1
Altitude: Input 1618, than klick int... Wolf-Henning Kusber
03:30 PM bug #7641 (Closed): Reference editor: Error when incerting several new authors into a new author team: Collection team:
A collection team was built with new members as
Owsianny, P.M., Marciniak G. & Trawiński, K... Wolf-Henning Kusber
02:59 PM feature request #7640 (Closed): Update ISO country names where necessary: Some of the currently used long labels are outdated. E.g. "Poland, Peoples Republic of" is now "Poland, Republic of".... Wolf-Henning Kusber
02:54 PM bug #7638: problem with media data missing meta data: now the size is not set to 0 if an exception appears because of missing metadata. Katja Luther
02:41 PM bug #7638: problem with media data missing meta data: the original exception is:
~~~
java.io.IOException: Could not read block (block start: 504, block length: 4245350... Katja Luther
02:39 PM bug #7638 (Resolved): problem with media data missing meta data: media imported via biocase sometimes do not show size and metadata and or exception "file not found"
AM:
Bei de... Katja Luther
12:58 PM feature request #6486: Implement handling of IntextReferences in dataportal: I just see that we do have types for cdm:reference and cdm:source. Probably the later one is usually better as it rep... Andreas Müller
09:03 AM task #7636 (Closed): remove obsolete code which dissociates removed TypeDesignations from Registrations: `SpecimenTypeDesignationWorkingsetEditorPresenter.saveBean()` contains code which is no longer needed since #7077 is ... Andreas Kohlbecker

08/07/2018

04:07 PM feature request #6321: Implement parallel loading + progress bar for loading objects into the bulk editor: I just reactivated and tested a bit. I made some small changes I think. Patrick Plitzner
03:44 PM feature request #6321: Implement parallel loading + progress bar for loading objects into the bulk editor: Did you change anything or did you simply reactivate? Andreas Müller
10:25 AM bug #7635 (New): ObjectNotFoundException during delete of synonym and name: ~~~
login : w.berendsohn
editor version : 5.1.2
server : api.cybertaxonomy.org (cybertaxonomy.org) / caryo_nep... Patrick Plitzner
10:24 AM bug #7634 (New): Timeout/Performance problems in Taxeditor: Walter
"ich bekomme (hier zuhause, eigentlich ein ganz guter Anschluss) ab und zu die untenstehende Fehlermeldung,... Patrick Plitzner
10:22 AM bug #7633 (New): MySQLIntegrityConstraintViolationException - Duplicate entry during fact editing: Walter:
"ich habe 2 Notes zusammengefasst und da noch ein bisschen korrigiert, gab u.a. Meldung, ich glaube schon,... Patrick Plitzner
10:20 AM bug #7632 (New): NullPointerException in EditFromSelectionWizard: Walter:
"ich habe im Bulk Editor eine existierende Generic Referenz mit der korrekten Book Section Referenz (war s... Patrick Plitzner

08/01/2018

06:23 PM bug #7616 (Closed): reference page: show name types: The specimen table header is shown even when only name types are available. The name types should be displayed correc... Andreas Kohlbecker
05:53 PM bug #7615 (In Progress): Registrations not searchable in the PhycoBank portal: ID-Suche = Perfekt, alle 10 Fälle, in denen keine Anzeige erfolgte, funktionieren jetzt über die ID-Suche
Was im A... Wolf-Henning Kusber
05:43 PM bug #7615: Registrations not searchable in the PhycoBank portal: ready for review. Andreas Kohlbecker
05:43 PM bug #7615 (Resolved): Registrations not searchable in the PhycoBank portal: Applied in changeset commit:cdm-dataportal|bb177c82fe3bf3c699fd30817cd82167f14fe47f. Andreas Kohlbecker
05:35 PM bug #7615 (In Progress): Registrations not searchable in the PhycoBank portal: This happens because the dataportal sends an empty querystring for the scientific name and the webservice is not igno... Andreas Kohlbecker
05:14 PM bug #7615 (Closed): Registrations not searchable in the PhycoBank portal: 100002 Planothidium taeansa
100003 Planothidium naradoense
sind im Vaadin Editor über die Nummer suchbar
http://... Wolf-Henning Kusber
02:27 PM bug #7614: IndexOutOfBoundsException after deleting in bulkeditor: PS: Das scheint an dem Record selbst zu liegen. Katja Luther
02:24 PM bug #7614 (Closed): IndexOutOfBoundsException after deleting in bulkeditor: mail of WB:
Hallo,
beim Springen auf einen Listeneintrag nach durchgeführtem Delete eines anderen bekomme ich u.... Katja Luther
11:07 AM feature request #7613 (New): Vaadin: Fehlervermeidung bei Anlegen einer Referenz: Wunsch: Dass bei der Eingabe einer Referenz der häufigste Fall eingestellt ist.
D.h. Wird eine neue Referenz angel... Wolf-Henning Kusber

07/31/2018

06:13 PM feature request #7612 (Duplicate): CacheStrategy for MediaSpecimens: The DerivedUnitFacadeCacheStrategy has no support for `MediaSpecimen`s.
see #7608 for which the creation of a stri... Andreas Kohlbecker
06:11 PM feature request #7611: media types with media uris are clickable: Good idea, than the "[icon]" string makes really sense. Wolf-Henning Kusber
05:59 PM feature request #7611 (Feedback): media types with media uris are clickable: It would be much easier to implement if the "[icon]" text would be clickable instead.
What do you think about this... Andreas Kohlbecker
05:57 PM feature request #7611 (Closed): media types with media uris are clickable: Media types should be rendered in the following form depending on their type:
* **unpublished** (has collection ... Andreas Kohlbecker
06:00 PM bug #7608 (Resolved): TypeDesignationSetManager: string representations for media types are missing: completely solved, please review Andreas Kohlbecker
02:57 PM bug #7608 (In Progress): TypeDesignationSetManager: string representations for media types are missing: Andreas Kohlbecker
12:12 PM bug #7608 (Closed): TypeDesignationSetManager: string representations for media types are missing: Media types are currently represented as:
* Antigua and Barbuda. Holotype,
After the comma data is missing.
... Andreas Kohlbecker
05:11 PM feature request #7610 (Duplicate): Type search in PhycoBank Portal: List of „Type desgnation status“
Automatic Kommentar: unverständlich und unnötig
Epitype Kommentar: wichtig
Holo... Wolf-Henning Kusber
02:36 PM task #7596 (In Progress): PhycoBank Portal - Formatting: Andreas Kohlbecker
10:24 AM task #7596: PhycoBank Portal - Formatting: Nein, stört überhaupt nicht. Wolf-Henning Kusber
10:24 AM task #7596: PhycoBank Portal - Formatting: Wolf-Henning Kusber wrote:
> zu 7: Okay, wenn wir hier zwischen Vaadin User Interface und EDIT Portal unterscheiden ... Andreas Kohlbecker
10:11 AM task #7596: PhycoBank Portal - Formatting: zu 7: Okay, wenn wir hier zwischen Vaadin User Interface und EDIT Portal unterscheiden können. Im Vaadin UI stören mi... Wolf-Henning Kusber
01:47 PM bug #7544 (Resolved): Dragging a misapplication onto itself throws an exception in name editor: Katja Luther
01:46 PM bug #7544 (In Progress): Dragging a misapplication onto itself throws an exception in name editor: As a first implementation d&d for concept relations are not provided anymore.
For d&d to another name editor I crea... Katja Luther
01:44 PM bug #7544 (Resolved): Dragging a misapplication onto itself throws an exception in name editor: Applied in changeset commit:taxeditor|b7e704af02bbd5214b09e110244470ab1969ad2a. Katja Luther
11:27 AM bug #7544: Dragging a misapplication onto itself throws an exception in name editor: Katja Luther wrote:
> I removed the possiblity to drop at a misapplied name, but should it be possible to drag a mis... Andreas Müller
11:00 AM bug #7544 (In Progress): Dragging a misapplication onto itself throws an exception in name editor: I removed the possiblity to drop at a misapplied name, but should it be possible to drag a misapplied name and drop i... Katja Luther
01:46 PM feature request #7609 (New): drag & drop misapplied names from one name editor to another editor: copied from #7544:
To me it does not make sense to d&d a misapplication (or a ppSyn) within a name editor at all. We... Katja Luther
01:27 PM task #7420: Import for higher taxon graph for phycobank: Hi, here comes the spread sheet with the first data for the import: attachment:Algen_Syllabus_NormalImplied_Test.xls
... Andreas Kohlbecker
01:19 PM bug #7603: Changing a user group does not work as expected: the collection of groups in user was not correctly updated. Katja Luther
01:19 PM bug #7603 (Resolved): Changing a user group does not work as expected: Applied in changeset commit:taxeditor|78b5b7f70fef88f8a0bebba7aa3f5e7d85545514. Katja Luther
12:19 PM feature request #7429 (Resolved): Improve parsing and formatting for VerbatimTimePeriod: Applied in changeset commit:cdmlib|f8c23aa7bed4470dc98635a7880dee45456979e0. Andreas Müller
11:57 AM task #7607 (Closed): TypeDesignationSetManager: remove brackets from type representations: Andreas Kohlbecker
11:57 AM task #7607 (Resolved): TypeDesignationSetManager: remove brackets from type representations: Applied in changeset commit:cdmlib|223a5fd3159ad97f0742a2baf1e9c594bb454fd1. Andreas Kohlbecker
11:55 AM task #7607 (Closed): TypeDesignationSetManager: remove brackets from type representations: Type representations are currently enclosed in brackets:
"*Type: Tanzania, United Republic of, River Baka, Konde-L... Andreas Kohlbecker
11:56 AM bug #7593: Vaadin Layout Section Drop down: Wäre eine pragmatische Idee, ich müsste aber schauen, ob das praxisgerecht ist.
Mit Hinblick auf den Bulk-Editor,... Wolf-Henning Kusber
11:48 AM bug #7593: Vaadin Layout Section Drop down: das ist ein anderes problem und hat mit zu langen titeln in der Auswahlliste zu tun. Vielleicht sollten wir die maxim... Andreas Kohlbecker
11:42 AM bug #7593: Vaadin Layout Section Drop down: Der Fehler tritt noch bei "New Registration" im drop down von "Choose from existing publications" auf. Das Bild in m... Wolf-Henning Kusber
11:25 AM bug #7593: Vaadin Layout Section Drop down: bitte nochmal testen, jetzt ist der server up to date. Andreas Kohlbecker
11:45 AM bug #7505 (Closed): IllegalStateException: Multiple representations problem when adding Annotation to name in NameBulkEditor: I could no longer reproduce this issue. I am closing the ticket therefore. Andreas Kohlbecker
11:08 AM bug #7606 (Duplicate): compact display of CDM Point data: Point data like the exact location in gathering events should be displayed in a compact form including the
* sexa... Andreas Kohlbecker
10:44 AM bug #6563: Display altitude, distance to Ground and watersurface correct handling of freetext: Applied in changeset commit:cdm-dataportal|dbc2bfa999e320fefb994358f70c28a612ee2f10. Andreas Kohlbecker
09:33 AM bug #6563 (Resolved): Display altitude, distance to Ground and watersurface correct handling of freetext: Reopen for review as the freetext issue is not covered by #7578.
(Also I would prefer "Duplicate", not "Rejected"... Andreas Müller
10:31 AM bug #7542: Move synonym of homotypical group to taxon does not move the homotypical group correctly: Applied in changeset commit:taxeditor|f210d45341a085e74c27ab2eadb0dedb9c9c7ae2. Katja Luther

07/30/2018

09:56 PM bug #7555: TaxonServiceImpl.findTaxaAndNames() broken for cichoriae searching for "Lapsana communis": By the way, on production I got 21 results, on test only 20 (with the above tests) so data might have slightly changed. Andreas Müller
09:53 PM bug #7555 (Feedback): TaxonServiceImpl.findTaxaAndNames() broken for cichoriae searching for "Lapsana communis": I can reproduce this on production with the given URL, but I can NOT reproduce on
* test: http://test.e-taxonomy... Andreas Müller
07:14 PM task #7596: PhycoBank Portal - Formatting: Hallo Henning,
zu 7)
Diese Klammern kann ich probelmlos entfernen, sie werden derzeit nur bei phycobank spezifi... Andreas Kohlbecker
06:40 PM bug #7538: Concurrent editing transaction strategy: Taxon turned into synonym by other user prior to saving taxon which was modified in editor: Andreas Kohlbecker wrote:
> **NOTE:** A general problem or caveat of the data in the audit tables are lacking a time... Andreas Müller
06:12 PM bug #7538: Concurrent editing transaction strategy: Taxon turned into synonym by other user prior to saving taxon which was modified in editor: Patrick Plitzner wrote:
> This could also be related to the same problem of concurrent editing:
>
> "...mal wiede... Andreas Müller
06:39 PM bug #7605 (Closed): harmonize cdm_tagged_text_to_markup() with tagged text strategy in cdmlib: Andreas Kohlbecker
06:39 PM bug #7605 (Resolved): harmonize cdm_tagged_text_to_markup() with tagged text strategy in cdmlib: Applied in changeset commit:cdm-dataportal|0f129a6f839fddb958d1217ddaa1bd8319b06991. Andreas Kohlbecker
06:37 PM bug #7605 (Closed): harmonize cdm_tagged_text_to_markup() with tagged text strategy in cdmlib: see `eu.etaxonomy.cdm.strategy.cache.TaggedCacheHelper` for reference impelmentations Andreas Kohlbecker
06:36 PM feature request #7604 (New): Add user to AuditEvent: Especially for delete events it is difficult to find out **who** did run the event as created_by and updated_by is al... Andreas Müller
06:24 PM bug #7505: IllegalStateException: Multiple representations problem when adding Annotation to name in NameBulkEditor: What is the current state here? For the release we should revert to non parallel loading I think as there are a coupl... Andreas Müller
05:52 PM bug #7602 (Closed): reference page: proper formating of taxonnames in registration summries: Andreas Kohlbecker
05:51 PM bug #7602 (Resolved): reference page: proper formating of taxonnames in registration summries: Applied in changeset commit:cdm-dataportal|afe99f4d4011a82f6232d6066b78d535321969df. Andreas Kohlbecker
04:33 PM bug #7602 (Closed): reference page: proper formating of taxonnames in registration summries: Name in registration summaries are rendered completely in italics even rank labels are italic
retrieve tagged titles... Andreas Kohlbecker
05:17 PM bug #7541: Insufficient rights lead to missing focus in name editor: moved the second part of the description to a new ticket: #7603 Andreas Müller
05:12 PM bug #7541: Insufficient rights lead to missing focus in name editor: we should urgently address the rights issues in taxeditor. Otherwise soon all users that should have limited rights w... Andreas Müller
05:15 PM bug #7603 (Closed): Changing a user group does not work as expected: Copied from #7541:
Da gleich der nächste Bug: Wenn man im Person Editor bereits eine Gruppe zugeordnet hatte (in d... Andreas Müller
04:47 PM bug #7537: Taxeditor can not connect to restarted, added cdm instance: Not sure if this is really a taxeditor ticket. However, we should test (and fix it soon).
KL/PP can you please de... Andreas Müller
04:30 PM bug #7542: Move synonym of homotypical group to taxon does not move the homotypical group correctly: Please also remove the current taxon from the search dialog.
Patrick, can you however to the review already for th... Andreas Müller
04:05 PM bug #7601 (Closed): date published time period in reference page shows 'to' even if end date is missing: Andreas Kohlbecker
04:04 PM bug #7601 (Resolved): date published time period in reference page shows 'to' even if end date is missing: Applied in changeset commit:cdm-dataportal|c0223d83af6fcd3403f41662078ab48d929bab1f. Andreas Kohlbecker
01:24 PM bug #7601 (Closed): date published time period in reference page shows 'to' even if end date is missing: Andreas Kohlbecker
03:42 PM bug #7593: Vaadin Layout Section Drop down: Fehler tritt im Test-System noch auf. Wolf-Henning Kusber
03:36 PM feature request #7594: RegistrationWorkingsetEditor click on new serveral times: "new name" is meant.
After clicking on "new name" the system needs some time to open the next form/dialog. If the bl... Wolf-Henning Kusber
10:05 AM feature request #7594 (Feedback): RegistrationWorkingsetEditor click on new serveral times: can you please elaborate your request a bit more?
I don't quite understand which button you are referring to. The R... Andreas Kohlbecker
03:23 PM bug #7592: Search Button PhycoBank Test: http://test.e-taxonomy.eu/dataportal/preview/phycobank/
Firefox
Seite vollständig geladen Wolf-Henning Kusber
09:45 AM bug #7592 (Feedback): Search Button PhycoBank Test: Ich habe keine Probleme mit dem Search-button-icon.
Wurde die Seite denn vollständig geladen oder war sie noch ni... Andreas Kohlbecker
01:53 PM feature request #7429 (In Progress): Improve parsing and formatting for VerbatimTimePeriod: Andreas Müller
01:05 PM feature request #7600 (Closed): public setters for entity collections: In model classes the setters for entity collections are protected or do not exist at all.
Only add*() and remove*() ... Andreas Kohlbecker
01:00 PM feature request #7599 (In Progress): treeView for specimen data in dataportal: The current implementation provides all specimen with the whole tree with the first WS call, is it better to get firs... Katja Luther
12:37 PM feature request #7599 (Closed): treeView for specimen data in dataportal: The specimen tab/page section should show the tree structure of the specimen. To avoid performance problems the data ... Katja Luther
10:27 AM feature request #7595: PhycoBank Portal - Order Reference name: please review Andreas Kohlbecker
10:23 AM feature request #7595 (Resolved): PhycoBank Portal - Order Reference name: Applied in changeset commit:cdm-dataportal|84e766b2d336588cb073dab03de2f547ac3f16c6. Andreas Kohlbecker
09:28 AM feature request #7598 (New): Grouping of Restrictions implemented: Since solving #7590 it is possible to logically combine Restrictions by AND and OR. To allow for really flexible sear... Andreas Kohlbecker

07/27/2018

09:11 PM bug #7593 (Duplicate): Vaadin Layout Section Drop down: this is rather a duplicate of #7593 than a subtask Andreas Kohlbecker
11:21 AM bug #7593 (Duplicate): Vaadin Layout Section Drop down: Drop down in Layout insert section not stable.
S.h. das Drop down Menue springt, wird breiter und schiebt damit das... Wolf-Henning Kusber
09:10 PM bug #7591 (Closed): Vaadin Layout Reference new: Andreas Kohlbecker
09:09 PM bug #7591 (Resolved): Vaadin Layout Reference new: Applied in changeset commit:cdmlib|6f6eaedfdbbc6c717dd37d2403ac60d7d09d0fb9. Andreas Kohlbecker
10:51 AM bug #7591 (Closed): Vaadin Layout Reference new: Layout-Problem Reference new
![](Layout-vaadin-reference-new.PNG) Wolf-Henning Kusber
03:26 PM feature request #7597 (Closed): Aggregate and persist descriptions on taxon level: ~~The aggregation will be done on taxon level with already aggregated/computed descriptions.~~
as decided in the l... Patrick Plitzner
02:34 PM bug #7588 (Closed): ToOneRelatedEntityCombobox: edit button must not be enabled when value is null: Andreas Kohlbecker
02:19 PM task #7596: PhycoBank Portal - Formatting: Achtung, automatische Nummerierung stimmt nicht mit Screenshot überein. Wolf-Henning Kusber
02:11 PM task #7596 (Closed): PhycoBank Portal - Formatting: See screen shot below or (http://test.e-taxonomy.eu/dataportal/preview/phycobank/cdm_dataportal/reference/b2741740-7d... Wolf-Henning Kusber
02:12 PM feature request #7572 (Resolved): SpecimenTypeDesignationEditor: Collection combobox shows collection.code and collection.institution: please review. Andreas Kohlbecker
01:53 PM feature request #7590 (Resolved): findByTitleWithRestrictions allows combining Restrictions by OR: Andreas Kohlbecker
08:40 AM feature request #7590 (In Progress): findByTitleWithRestrictions allows combining Restrictions by OR: Andreas Kohlbecker
01:40 PM feature request #7595 (Closed): PhycoBank Portal - Order Reference name: Change 1)in Reference 2) Name string to
1) Name string (2) in Reference
![](PhycoBank_Portal_Ref_Name.PNG) Wolf-Henning Kusber
11:47 AM feature request #7594 (Closed): RegistrationWorkingsetEditor click on new serveral times: Vaadin Registration Workingset Editor
Click on "new name" starts a new name popup editor. The blue progressbar on ... Wolf-Henning Kusber
10:56 AM bug #7592 (Closed): Search Button PhycoBank Test: TestPortal PhycoBank, Firefox 61.0.1 (64-Bit)
Bug: icon for search not visible.
![](Bug-Portal-PhycoBank.PNG) Wolf-Henning Kusber

07/26/2018

02:37 PM feature request #7572 (In Progress): SpecimenTypeDesignationEditor: Collection combobox shows collection.code and collection.institution: Andreas Kohlbecker
02:36 PM feature request #7572: SpecimenTypeDesignationEditor: Collection combobox shows collection.code and collection.institution: The CdmFilterablePagingProvider is not yet including the institution titlecache in the search.
For this to impleme... Andreas Kohlbecker
02:35 PM feature request #7590 (Closed): findByTitleWithRestrictions allows combining Restrictions by OR: see #7572#note-2 for details Andreas Kohlbecker
02:13 PM bug #7588 (Resolved): ToOneRelatedEntityCombobox: edit button must not be enabled when value is null: Applied in changeset commit:cdm-vaadin|2965ff8869dba39344151eee9da003154865dc48. Andreas Kohlbecker
01:13 PM bug #7588 (Closed): ToOneRelatedEntityCombobox: edit button must not be enabled when value is null: The edit button of the ToOneRelatedEntityCombobox is enabled even if the value is null. Andreas Kohlbecker
01:36 PM feature request #7589: Performance, UX and stability patches for CharacterMatrix: changes:
commit:taxeditor|b4f09ad3c826e81124053685a7d946a3c9b10778
commit:taxeditor|b5a4b38f8c40957ef909259004fa5... Patrick Plitzner
01:34 PM feature request #7589 (Closed): Performance, UX and stability patches for CharacterMatrix: This ticket is for collecting all the changes done to improve the stability and performance and the user experience o... Patrick Plitzner
11:48 AM bug #7366: TeamOrPersonField readonly if users lacks edit permissions: setting the datasource to readonly as it was implemented for this issue was causing problems with the ToOneRelatedEnt... Andreas Kohlbecker
11:47 AM bug #7586: com.vaadin.data.Property$ReadOnlyException on opening TypeSpecimenWorkingsetEditor: This should be solved now! Andreas Kohlbecker
11:41 AM bug #7586: com.vaadin.data.Property$ReadOnlyException on opening TypeSpecimenWorkingsetEditor: for solving #7366 the datasource is set in `TeamOrPersonField.adaptToUserPermissions()` to readonly if the the lacks ... Andreas Kohlbecker
08:07 AM bug #7586 (Resolved): com.vaadin.data.Property$ReadOnlyException on opening TypeSpecimenWorkingsetEditor: Applied in changeset commit:cdm-vaadin|bbdd609fd9f9a504f0225c98ce01c8f4b19931f9. Andreas Kohlbecker
08:05 AM bug #7586 (Closed): com.vaadin.data.Property$ReadOnlyException on opening TypeSpecimenWorkingsetEditor: This ReadOnlyException is thrown when a user with insufficient privileges for editing the collector related to a Fiel... Andreas Kohlbecker
08:21 AM task #7587 (New): ToOneRelatedEntityReloader to listen and operate on PropertyDatasources directly?: This idea came up while working on #7586.
Currently the `ToOneRelatedEntityReloader` is attached as `ValueChangeLi... Andreas Kohlbecker

07/25/2018

07:18 PM task #7573 (Closed): CollectionPopEditor superCollection only visible for advanced users: Andreas Kohlbecker
04:48 PM bug #7585 (Closed): RegistrationCuratorRoleProbe does not only check the ROLE_CURATION: the check done in this class seems wrong:
~~~java
return a.equals(RolesAndPermissions.ROLE_CURATION)
... Andreas Kohlbecker
04:36 PM feature request #7572 (Resolved): SpecimenTypeDesignationEditor: Collection combobox shows collection.code and collection.institution: Applied in changeset commit:cdm-vaadin|d7edf1e089bd6f3a63904f86bf6160aaa4d1839a. Andreas Kohlbecker
04:21 PM feature request #7570: Institution editor implemented: implemented with basic set of fields covering
* name
* code
* part of other institution
according to #7571 : ... Andreas Kohlbecker
04:19 PM feature request #7570 (Resolved): Institution editor implemented: Applied in changeset commit:cdm-vaadin|90e5b45a71c8b48e029fbbbc5d0393022f0f041e. Andreas Kohlbecker
04:19 PM feature request #7571 (Resolved): Collection editor has field to select and edit the institution: Applied in changeset commit:cdm-vaadin|1faff10b568bf292fda37d44a8dd1502de16efcb. Andreas Kohlbecker
11:00 AM bug #7543: Name Editor does not auto-scroll during dragging: this is not as easy as it seems, we need to write our own listener which listen on the mouse position and scrolls, wh... Katja Luther
08:26 AM feature request #7584 (New): Display unscary notification instead of "delete operation was abborded by the system" when related objects exist: The error box which is currently shown after the attempt to delete a cdm entity which is still used by other entities... Andreas Kohlbecker
07:58 AM bug #7583 (Resolved): NPE on logout in registration list view: Applied in changeset commit:cdm-vaadin|10d75c612b4f8c6a2fed7ebe8f402d18917af536. Andreas Kohlbecker
07:57 AM bug #7583 (Closed): NPE on logout in registration list view: …und beim Logout:
~~~~
com.vaadin.server.ServerRpcManager$RpcInvocationException: Unable to invoke method click... Andreas Kohlbecker

07/24/2018

06:17 PM feature request #7551 (Closed): TypeDesignationSetManager provides summary as TaggedText: Andreas Kohlbecker
06:15 PM feature request #7551 (Duplicate): TypeDesignationSetManager provides summary as TaggedText: duplicate of #7348 Andreas Kohlbecker
06:13 PM bug #6695 (Closed): module cdmlib/services should not be an osgi bundle: Andreas Kohlbecker
06:13 PM bug #6695: module cdmlib/services should not be an osgi bundle: this has been solved by adding the following pluginExecution configuration to cdmlib/lifecycle-mapping-metadata.xml w... Andreas Kohlbecker
06:06 PM bug #7358 (Closed): Show warning when browser history back is used while popup editors are open: Andreas Kohlbecker
06:05 PM bug #7358 (Resolved): Show warning when browser history back is used while popup editors are open: Applied in changeset commit:cdm-vaadin|26e068777f74a5d5f07ac19a4ce727eecc16093d. Andreas Kohlbecker
04:11 PM bug #7582 (Duplicate): prevent from creating empty registrations: The RegistrationWorkinsetEditor leaves empty registrations in the database when a new 'typification only registration... Andreas Kohlbecker
03:59 PM bug #7542: Move synonym of homotypical group to taxon does not move the homotypical group correctly: please review Katja Luther
03:58 PM bug #7542 (Resolved): Move synonym of homotypical group to taxon does not move the homotypical group correctly: Applied in changeset commit:cdmlib|eb95398b963a25d0d4d48bff12767dd4cd984de4. Katja Luther
03:37 PM bug #6379 (Worksforme): specimens of lectotypes not shown in portal: it seems as this has been fixed meanwhile. Andreas Kohlbecker
03:20 PM feature request #7462 (Feedback): references in type footnotes are clickable links: is this still needed with the new registration page? Andreas Kohlbecker
03:15 PM feature request #7581 (New): TaxonNamePopEditor: support for editing of all name relationships: Currently the TaxonNamePopEditor allows editing of basionyms, and of validations as well as replaced synonyms.
The... Andreas Kohlbecker
02:53 PM feature request #7580 (In Progress): User wishes: CharacterMatrix: * enter values in multiple cells simultanously
* copy&paste cell value (maybe via dragging) Patrick Plitzner
02:49 PM bug #7579 (New): Set up pipelines in Jenkins to replace the build pipelines: Our jenkins setup are using the [build-pipeline-plugin](https://plugins.jenkins.io/build-pipeline-plugin).
Since J... Andreas Kohlbecker
02:41 PM bug #7578: preseve null values in all mesurements during serialization of webservice responses: review by checking the example record here: http://test.e-taxonomy.eu/dataportal/preview/cichorieae/cdm_dataportal/ta... Andreas Kohlbecker
02:38 PM bug #7578 (Resolved): preseve null values in all mesurements during serialization of webservice responses: Applied in changeset commit:cdmlib|d9f51acb041832197601f3343f4d3f6fd777b888. Andreas Kohlbecker

07/23/2018

01:10 PM bug #6563 (Rejected): Display altitude, distance to Ground and watersurface correct handling of freetext: Rejecting this issue as only the symptom is described here.
The actual cause is false serialization of Double value... Andreas Kohlbecker
01:08 PM bug #7578 (Closed): preseve null values in all mesurements during serialization of webservice responses: as reported in #6563 the double values which are `null` are serialized as `0.0` by json-lib this is plain wrong for a... Andreas Kohlbecker
12:20 PM bug #7577: Set Publish Flag for Subtree Dialog - Further Problems with Progressmonitor: In the end the cdm-remote instance crashed with a `java.lang.OutOfMemoryError: Java heap space` even if it has been s... Andreas Kohlbecker
12:18 PM bug #7577: Set Publish Flag for Subtree Dialog - Further Problems with Progressmonitor: A anylysis of the staktrace kane with jstack revels that it is `hibernate.search` taking all the CPU in order to inde... Andreas Kohlbecker
11:52 AM bug #7577: Set Publish Flag for Subtree Dialog - Further Problems with Progressmonitor: I tested again.
This time I set the publish flag to true, all taxa an synonmys intially are publish = false:
... Andreas Kohlbecker
10:41 AM bug #7577 (New): Set Publish Flag for Subtree Dialog - Further Problems with Progressmonitor: Summarizing the insights from this examination I come to the conclusion that we need to work on the following:
1... Andreas Kohlbecker
10:41 AM bug #7576 (Feedback): Set Publish Flag for Subtree Dialog - Problems with Progressmonitor: Andreas Kohlbecker
10:34 AM bug #7576: Set Publish Flag for Subtree Dialog - Problems with Progressmonitor: Hallo Katja,
ich weiß, dass du an diesem Problem gearbeitet hast, konnte aber kein Ticket dazu finden. Daher habe ... Andreas Kohlbecker
10:30 AM bug #7576 (Closed): Set Publish Flag for Subtree Dialog - Problems with Progressmonitor: Setzen des Publish-Flags auf der kompletten Cichorienklassifikation:

Die Prozentanzeige bleibt bei 54.95% stehen ... Andreas Kohlbecker

07/20/2018

05:42 PM bug #7557 (Resolved): TaxonNamePopEditor: com.vaadin.data.Property$ReadOnlyException on saving a sub popup editor: Andreas Kohlbecker
05:42 PM bug #7557 (Feedback): TaxonNamePopEditor: com.vaadin.data.Property$ReadOnlyException on saving a sub popup editor: I can no longer reproduce this issue since #7574 is fixed.
Henning, please try be yourself to reproduce this bug. ... Andreas Kohlbecker
11:31 AM bug #7557: TaxonNamePopEditor: com.vaadin.data.Property$ReadOnlyException on saving a sub popup editor: [another report of the same bug:]
Lieber Andreas,

http://test.e-taxonomy.eu/cdmserver/phycobank_production/a... Andreas Kohlbecker
05:34 PM bug #7574: IllegalStateException: Multiple representations ... when saving ReferenceEditor with in Reference ...: I hope and think that this issue is finally fixed now.
please review. Andreas Kohlbecker
05:07 PM bug #7574 (Resolved): IllegalStateException: Multiple representations ... when saving ReferenceEditor with in Reference ...: Applied in changeset commit:cdm-vaadin|1641827e91d78dc483e225d1265e88d317e5d981. Andreas Kohlbecker
01:06 PM bug #7574 (Closed): IllegalStateException: Multiple representations ... when saving ReferenceEditor with in Reference ...: IllegalStateException: Multiple representations when saving ReferenceEditor with in Refercence
This happens when c... Andreas Kohlbecker
05:27 PM bug #7558 (Duplicate): IllegalStateException: Multiple representations ... when saving first typeDesignation for nameless Registration: resolved also through the changes made for #7574, so this is clearly a duplicate Andreas Kohlbecker
01:10 PM feature request #7575 (Closed): Implement advanced quantitative cell editor: Editor should have two states:
* Edit a list of exact values
* edit aggregated values like min, max, etc.
Impr... Patrick Plitzner
12:08 PM task #7573 (Closed): CollectionPopEditor superCollection only visible for advanced users: super collection field only visible for selected users (Role=CURATOR|ADMIN)
First of all can the concept of the su... Andreas Kohlbecker
12:02 PM feature request #7572 (Closed): SpecimenTypeDesignationEditor: Collection combobox shows collection.code and collection.institution: this is required because ...
Fall 3: Es gibt einen Code, der identisch mit einen Index Herbariorum Code ist (NWU) ... Andreas Kohlbecker
12:00 PM feature request #7571 (Closed): Collection editor has field to select and edit the institution: Wenn alle Institutionen einen Code haben, ist alles fein.

Normaler Weise gibt es 3 Fälle:
Fall 1: Code nac... Andreas Kohlbecker
11:58 AM feature request #7570 (Closed): Institution editor implemented: An InstitutionPopupEditor is urgently needed for Collection and also important for References Andreas Kohlbecker
10:54 AM feature request #7569: SpecimenTypeDesignationEditor: Typedesignations should be ordered: fixed and ready for review. Andreas Kohlbecker
10:53 AM feature request #7569 (Resolved): SpecimenTypeDesignationEditor: Typedesignations should be ordered: Applied in changeset commit:cdm-vaadin|6055cbe049e1e8d7db866c07419c26f705acb5f8. Andreas Kohlbecker
10:52 AM feature request #7569 (Closed): SpecimenTypeDesignationEditor: Typedesignations should be ordered: [requested by Henning]:
Anfrage zur Sortierung der Typen:
Zeitlich und logisch gebe ich zuerst den Lectotypus an,... Andreas Kohlbecker
10:28 AM bug #7566 (Resolved): TeamOrPersonField: some Persons can not be selected: Andreas Kohlbecker
08:34 AM bug #7566: TeamOrPersonField: some Persons can not be selected: These problems are related to the changes made for #7535
The root cause is the code line
~~~java
private v... Andreas Kohlbecker
10:18 AM bug #7567 (Duplicate): SpecimenTypeDesignationEditor: Collection selection only set at second select action: duplicate of #7566 Andreas Kohlbecker
10:14 AM bug #7568 (Closed): SpecimenTypeDesignationEditor: Collector Field not following the readonly state of the editor.: Andreas Kohlbecker
10:13 AM bug #7568 (Resolved): SpecimenTypeDesignationEditor: Collector Field not following the readonly state of the editor.: Applied in changeset commit:cdm-vaadin|7278c990f5a49dd1a0fd17d9cd705717cfd4279f. Andreas Kohlbecker
08:56 AM bug #7568 (Closed): SpecimenTypeDesignationEditor: Collector Field not following the readonly state of the editor.: Andreas Kohlbecker

07/19/2018

06:09 PM bug #7567 (Duplicate): SpecimenTypeDesignationEditor: Collection selection only set at second select action: reported by Hening:
Auswahl wird beim ersten Auswählen nicht angenommen, erst nach 2. Auswahl. Andreas Kohlbecker
06:03 PM bug #7566: TeamOrPersonField: some Persons can not be selected: I found one minor issue while investigating this: The NOMENCLATURAL_TITLE was being used for the caption of the coll... Andreas Kohlbecker
05:51 PM bug #7566 (Closed): TeamOrPersonField: some Persons can not be selected: This issue only occurs with some few Persons:
[originally reported by Hennig]
Folgende Eingabeprobleme im speci... Andreas Kohlbecker
04:37 PM feature request #7496: TaxonNodes in cdm_taxontree can either link to taxon or reference search result pages: implemented and ready for testing Andreas Kohlbecker
04:37 PM feature request #7496 (Resolved): TaxonNodes in cdm_taxontree can either link to taxon or reference search result pages: Applied in changeset commit:cdm-dataportal|8a4d078dfa6e2200f5e4b25c28d1bdcb7d82cf7b. Andreas Kohlbecker
03:47 PM task #7565 (New): cdm_taxontree remove all code for using the tree to browse drupal term taxonomies: The cdm_taxontree has been developed to provide dual use:
1. Browse cdm classifications
1. Browse drupal term t... Andreas Kohlbecker
03:25 PM bug #6356: taxontree sort order as in editor: no longer important for phycobank since we will model the classification with taxon relations Andreas Kohlbecker
03:14 PM feature request #7494: RegistrationSearch implemented: Implemented, please test. There are two ways to perform a search:
1. go to the registration search directly http:/... Andreas Kohlbecker
03:08 PM task #7561 (Closed): OccurrencePortalController and FieldUnitDTO should not allow passing the determintation, associated name as argument: all done! Andreas Kohlbecker
03:06 PM feature request #6967 (Closed): RegistrationController identifier endpoints implemented: complete! Andreas Kohlbecker
03:05 PM feature request #7348 (Closed): RegistrationDTO webservices implemented: complete! Andreas Kohlbecker
11:43 AM feature request #7348: RegistrationDTO webservices implemented: Andreas Kohlbecker wrote:
> **TODO:**
>
> remove the following fields from DTO Serialization:
>
> * `typeDesi... Andreas Kohlbecker
02:58 PM bug #7564 (Closed): remove Phycobank - Registration data - block and other outdated registration code: ~~also remove `render_registrations()` in name.inc?~~ need to keep this method since it is used in reder_taxon_or_n... Andreas Kohlbecker
02:43 PM task #7562 (Resolved): Specimen table "Associated with" taxon is irritating and needs to be removed, replaced: Hallo Norbert,
nach Rücksprache mit Patrick habe ich erfahren, dass die Anforderung das "assoziierte" Taxon bei de... Andreas Kohlbecker
02:13 PM bug #7563 (In Progress): requests with %2F in URL are rejected by apache: Andreas Kohlbecker
02:00 PM bug #7563 (Closed): requests with %2F in URL are rejected by apache: requests like http://test.e-taxonomy.eu/cdmserver/phycobank_production/registrationDTO/identifier/http%+3+A%2F%2Fphyc... Andreas Kohlbecker
12:09 PM feature request #7495 (Resolved): Registration page implemented: ready for the review Andreas Kohlbecker

07/18/2018

09:38 PM bug #7554 (Closed): TeamOrPersonField: removing existing team and adding new team leaves nested components buttons in disabled state: Thank you for reviewing. I will close this issue now. Andreas Kohlbecker
06:44 PM bug #7554 (Worksforme): TeamOrPersonField: removing existing team and adding new team leaves nested components buttons in disabled state: New multiauthor teams consisting of existing and new authors can be built without errors. Wolf-Henning Kusber
04:45 PM bug #7554 (Resolved): TeamOrPersonField: removing existing team and adding new team leaves nested components buttons in disabled state: Andreas Kohlbecker
04:45 PM bug #7554: TeamOrPersonField: removing existing team and adding new team leaves nested components buttons in disabled state: With the last commit I no longer can reproduce any of the issues described in this ticket.
Please review. Andreas Kohlbecker
06:03 PM task #7561 (In Progress): OccurrencePortalController and FieldUnitDTO should not allow passing the determintation, associated name as argument: Andreas Kohlbecker
04:50 PM task #7561: OccurrencePortalController and FieldUnitDTO should not allow passing the determintation, associated name as argument: Point 1) in this issue description was also raised for the data_portal in #6816 as point 4). The "Associated with" in... Andreas Kohlbecker
03:45 PM task #7561 (Closed): OccurrencePortalController and FieldUnitDTO should not allow passing the determintation, associated name as argument: The OccurrencePortalController allows requests of the form `/portal/occurrence/{uuid}/derivateHierarchy?uuid={taxonUu... Andreas Kohlbecker
05:13 PM bug #6816 (Closed): [Dataportal] Specimen table issues: For me the issue raised in point 4) is not solved or answered satisfyingly. I stumbled over this in the attempt to us... Andreas Kohlbecker
04:59 PM task #7562 (Closed): Specimen table "Associated with" taxon is irritating and needs to be removed, replaced: see issues #6816, #7561 for older information on this.
Andreas Kohlbecker
04:16 PM bug #7547: ToManyRelatedEntitiesComboboxSelect buttons enabled even if the containig editor is readOnly: the changes for this ticket cause other problems: #7554 Andreas Kohlbecker
03:05 PM bug #7559 (Resolved): possibly corrupted hiberante session after previous error on saving editor: clearing the session only after an exception seems to work by now.
Once it is confirmed that the session problems ... Andreas Kohlbecker
03:00 PM bug #7559 (Worksforme): possibly corrupted hiberante session after previous error on saving editor: Andreas Kohlbecker
02:23 PM bug #7559: possibly corrupted hiberante session after previous error on saving editor: modified error handling: only clearing the session, no longer closing it in turn of errors commit:cdm-vaadin|a903034c Andreas Kohlbecker
02:21 PM bug #7559: possibly corrupted hiberante session after previous error on saving editor: Closing the session in turn of exceptions seems to cause other problems:
[reported by Henning]
Referenz „Ehrenb... Andreas Kohlbecker
03:02 PM bug #7560 (Worksforme): LazyInitializationException (LIE) saving TaxonNamePopupEditor caused during hibernate.search indexing: This was caused by a change related to #7559 and was fixed with commit:cdm-vaadin|f53fffc Andreas Kohlbecker
02:42 PM bug #7560 (Worksforme): LazyInitializationException (LIE) saving TaxonNamePopupEditor caused during hibernate.search indexing: ~~~
[phycobank] 14:25:46,718 ERROR [qtp759156157-24][eu.et.va.mv.AbstractPopupEditor] - org.springframework.orm.hi... Andreas Kohlbecker

07/17/2018

09:28 PM bug #7558 (Resolved): IllegalStateException: Multiple representations ... when saving first typeDesignation for nameless Registration: Andreas Kohlbecker
05:41 PM bug #7558 (Duplicate): IllegalStateException: Multiple representations ... when saving first typeDesignation for nameless Registration: New Registration -> new reference -> with rerenceType mit team (first autor + empty second) -> save -> reopen add fu... Andreas Kohlbecker
05:45 PM bug #7559 (Closed): possibly corrupted hiberante session after previous error on saving editor: this error has possibly been caused by the error documented in #7558
~~~
Jul 17, 2018 4:49:21 PM com.vaadin.s... Andreas Kohlbecker
05:31 PM bug #7557 (Closed): TaxonNamePopEditor: com.vaadin.data.Property$ReadOnlyException on saving a sub popup editor: potentially caused by the same bug as #7574
from the stacktrace it is not clear which popup editor was being saved... Andreas Kohlbecker
01:02 PM feature request #7494 (Resolved): RegistrationSearch implemented: Applied in changeset commit:cdm-dataportal|a6ae799bf137d61817db96bd5b32bdeed480e09e. Andreas Kohlbecker
12:35 PM bug #7552 (Closed): use TaggedText.entityReference to add style and uuid to html tags: Andreas Kohlbecker
12:35 PM bug #7552 (Resolved): use TaggedText.entityReference to add style and uuid to html tags: Applied in changeset commit:cdm-dataportal|55083981158955cd614c2c59cb4d965581686160. Andreas Kohlbecker
11:03 AM bug #7554 (In Progress): TeamOrPersonField: removing existing team and adding new team leaves nested components buttons in disabled state: The bug obviously still exists when a Person is added to an existing team. Andreas Kohlbecker
07:15 AM bug #7554: TeamOrPersonField: removing existing team and adding new team leaves nested components buttons in disabled state: Hallo Henning,
ich befürchte der Test-Server war noch nicht auf dem neuesten Stand als du getestet hattest. BItte ... Andreas Kohlbecker
09:42 AM feature request #7217: SpecimenTypedesignationsWorkingsetEditor: Longitute Latitude fields allow values in degrees minutes seconds formats: Known minor point:
On my computer, decimal values are only accepted if a Komma is used. A full stop is ignored by th... Wolf-Henning Kusber

07/16/2018

09:00 PM bug #7555 (Closed): TaxonServiceImpl.findTaxaAndNames() broken for cichoriae searching for "Lapsana communis": the request:
http://api.cybertaxonomy.org/cichorieae/portal/taxon/find.json?doTaxaByCommonNames=1&doMisapplie... Andreas Kohlbecker
04:33 PM bug #7554: TeamOrPersonField: removing existing team and adding new team leaves nested components buttons in disabled state: Problem solved, but not very user-friendly.
http://test.e-taxonomy.eu/cdmserver/phycobank_production/app/registrat... Wolf-Henning Kusber
04:07 PM bug #7554: TeamOrPersonField: removing existing team and adding new team leaves nested components buttons in disabled state: Problems solved, please test. Andreas Kohlbecker
04:06 PM bug #7554 (Resolved): TeamOrPersonField: removing existing team and adding new team leaves nested components buttons in disabled state: Applied in changeset commit:cdm-vaadin|1fef72149b63a405d436e3174ca513c3e961275b. Andreas Kohlbecker
03:57 PM bug #7554 (Closed): TeamOrPersonField: removing existing team and adding new team leaves nested components buttons in disabled state: habe ein Problem mit einem neuen Autorenteam in der Section.
Workingset: http://test.e-taxonomy.eu/cdmserver/phyco... Andreas Kohlbecker
03:26 PM task #7550: Move UserHelper from cdm-vaadin into cdmlib: can be closed if the changes are not again causing any obvious errors Andreas Kohlbecker
02:49 PM task #7550: Move UserHelper from cdm-vaadin into cdmlib: The `VaadinUserHelper` which was registering itself in the vaadin session was causing problems in the cdm-webapp.war ... Andreas Kohlbecker

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