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From 07/08/2018 to 08/06/2018

08/06/2018

06:47 PM bug #7631 (Worksforme): PhycoBank Vaadin: Institution selected, edit with Collection code fails
http://test.e-taxonomy.eu/cdmserver/phycobank_production/app/registration#!workingset/59ddc453-1333-4577-9823-ea9e3d9... Wolf-Henning Kusber
03:25 PM bug #7617 (Closed): Specimen TypesDesignations Editor - aus dem Editor heraus neu angelegter Coll...
Bug is fixed! Wolf-Henning Kusber
12:18 PM bug #7630 (Closed): blocking registration relations get lost after saving adding a typedesignatio...
closely related to #7629 Andreas Kohlbecker
12:16 PM bug #7629: creating a typification only registration should not be possible if the names protolog...
Hi Henning,
I modified the workflow for creating new registrations. I introduced more constraints regarding the ty...
Andreas Kohlbecker
12:05 PM bug #7629 (Resolved): creating a typification only registration should not be possible if the nam...
Applied in changeset commit:cdm-vaadin|11247507b69b5b1c062e3d6469d37b5e5cea94b3. Andreas Kohlbecker
11:58 AM feature request #7626 (Duplicate): PhycoBank Angefangene Registrierungen erzeugen PhycoBank Ident...
Andreas Kohlbecker
11:58 AM bug #7582: prevent from creating empty registrations
The preferred solution to this problem would be store the new Registration only when a type designation was added and... Andreas Kohlbecker
11:52 AM bug #7625 (Duplicate): RegistrationWorkingsetEditor: if a registered name is selected, the same ...
Andreas Kohlbecker

08/03/2018

09:33 PM bug #7628 (Closed): Create registration for existing name (typification only) creates two registr...
problem solved.
in the workflow code a blocking registration was created for the typification only registration, t...
Andreas Kohlbecker
09:25 PM bug #7628 (Resolved): Create registration for existing name (typification only) creates two regis...
Applied in changeset commit:cdm-vaadin|2a2845cefcb5dd887ba96665180c97b5d63ff11c. Andreas Kohlbecker
08:44 PM bug #7628 (Closed): Create registration for existing name (typification only) creates two registr...
Start from the working set where the already registered name is listed and and select the name in the existing names ... Andreas Kohlbecker
09:20 PM bug #7629 (Closed): creating a typification only registration should not be possible if the names...
Andreas Kohlbecker
08:37 PM feature request #7627 (New): registrationsystem prevents from creating duplicate registrations of...
in cases where a unregistered name exists in the datanbase it is possible to create two or more registrations for the... Andreas Kohlbecker
07:54 PM bug #7617 (Feedback): Specimen TypesDesignations Editor - aus dem Editor heraus neu angelegter Co...
the bug in #7590 has been fixed, please close this issue if the collections codes are found now. Andreas Kohlbecker
07:51 PM bug #7617: Specimen TypesDesignations Editor - aus dem Editor heraus neu angelegter CollectionCod...
Andreas Kohlbecker wrote:
> It seams as if only collections are found which also have a institute - Restriction OR m...
Andreas Kohlbecker
12:51 PM bug #7617: Specimen TypesDesignations Editor - aus dem Editor heraus neu angelegter CollectionCod...
It seams as if only collections are found which also have a institute - Restriction OR must be implemented as outer j... Andreas Kohlbecker
11:35 AM bug #7617: Specimen TypesDesignations Editor - aus dem Editor heraus neu angelegter CollectionCod...
Wird vielleicht auf dem Namen gesucht? Namen von Alteinträgen sind in der Auswahlliste, wenn ein Code da ist, wird de... Wolf-Henning Kusber
06:53 PM feature request #7611 (Resolved): media types with media uris are clickable
Implemented, but I needed to display the link to the image as icon, which now directly follows the "[icon]". This was... Andreas Kohlbecker
05:47 PM feature request #7626 (Duplicate): PhycoBank Angefangene Registrierungen erzeugen PhycoBank Ident...
Jede angefangene Registrierung erzeugt einen Blank Record, oder einen fast leeren Record mit PhycoBank Identifier. Es... Wolf-Henning Kusber
05:28 PM bug #7625 (Duplicate): RegistrationWorkingsetEditor: if a registered name is selected, the same ...
http://test.e-taxonomy.eu/cdmserver/phycobank_production/app/registration#!workingset/1eb5742f-3e18-4970-bfa5-4a96e1d... Wolf-Henning Kusber
04:57 PM feature request #7624 (Closed): Note field for Reference in Vaadin
In the editorial process, users need editorial notes for references.
The Curator needs to internally store some info...
Wolf-Henning Kusber
04:57 PM feature request #4227: handle generated resources in eclipse workspace
Katja Luther wrote:
> I still have the error message
>
> Plugin execution not covered by lifecycle configuration...
Andreas Kohlbecker
04:06 PM feature request #4227: handle generated resources in eclipse workspace
I still have the error message
Plugin execution not covered by lifecycle configuration: org.apache.maven.plugins:...
Katja Luther
04:46 PM feature request #7458 (Closed): Note field for TaxonName , NameType and SpecimenType editors
Alles getestet, Perfekt! Ich nutze es z.B. für nicht eingebbare Daten oder Unklarheiten in den Daten. Wolf-Henning Kusber
04:21 PM bug #7537 (Rejected): Taxeditor can not connect to restarted, added cdm instance
OK, it seems as this is not reproducible. I am closing the issue as rejected. Andreas Kohlbecker
04:09 PM bug #7537: Taxeditor can not connect to restarted, added cdm instance
1. I commented the campanula DB
1. Restarted the cdmserver
1. Tried to connect to instances that were already up du...
Patrick Plitzner
10:58 AM bug #7537: Taxeditor can not connect to restarted, added cdm instance
You need to **add a new cdm-remote instance to a cdmserver start only this instance and then try to connect the Taxed... Andreas Kohlbecker
07:59 AM bug #7537 (Feedback): Taxeditor can not connect to restarted, added cdm instance
Is this still an issue? The "Connect" button is not greyed out for me. I could also log in. Patrick Plitzner
03:30 PM bug #7623: missing or broken import issues for ABCD import
Katja Luther wrote:
> * ~~Bei der Suche mit Landesfilter GR habe ich grundsätzlich kein Ergebnis zurückbekommen. Auf...
Katja Luther
03:22 PM bug #7623 (In Progress): missing or broken import issues for ABCD import
Katja Luther
03:21 PM bug #7623: missing or broken import issues for ABCD import
Aufsammlungsdaten fehlen auch beim AlgaTerra New-Import. Wolf-Henning Kusber
03:18 PM bug #7623 (In Progress): missing or broken import issues for ABCD import
* Bei der Suche mit Landesfilter GR habe ich grundsätzlich kein Ergebnis zurückbekommen. Auf http://ww2.bgbm.org/Herb... Katja Luther
02:45 PM bug #7622 (Closed): RegistrationWorkingsetEditor: navigating to other pages with fresh registrati...
The RegistrationWorkinsetEditor leaves empty registrations in the database when a new 'typification only registration... Andreas Kohlbecker
02:43 PM bug #7615 (Closed): Registrations not searchable in the PhycoBank portal
Andreas Kohlbecker
02:42 PM feature request #7621 (Closed): registration search also covers typified names
The typified names associated with the typedesignations are not covered by this search. Maybe we need to extend the s... Andreas Kohlbecker
02:01 PM feature request #6740 (Closed): Popup Editor for NameTypeDesignation
works Andreas Kohlbecker
02:00 PM bug #7207 (Closed): TeamOrPersonField and PersonField comboboxSelect is configurable to use diffe...
is ok! Andreas Kohlbecker
01:59 PM bug #7344 (Closed): TaxonNamesEditor to fill authorship fields automatically if nomref and basion...
works! Andreas Kohlbecker
01:57 PM bug #7608 (Closed): TypeDesignationSetManager: string representations for media types are missing
Henning sagt: PASST! Andreas Kohlbecker
01:53 PM bug #7574 (Closed): IllegalStateException: Multiple representations ... when saving ReferenceEdi...
WORKS! Andreas Kohlbecker
01:52 PM feature request #7570 (Closed): Institution editor implemented
Henning: the institution title is sufficient, address not needed! Andreas Kohlbecker
01:48 PM bug #7557 (Worksforme): TaxonNamePopEditor: com.vaadin.data.Property$ReadOnlyException on saving ...
this issue did not occure since 14 days, seems to be solved Andreas Kohlbecker
01:47 PM bug #7535 (Closed): TeamOrPersonField: remove OK button an select the chosen enitity immediately
the changes made for this issue caused a couple of bugs which are all solved now, can be closed now. Andreas Kohlbecker
01:46 PM feature request #6321 (Resolved): Implement parallel loading + progress bar for loading objects i...
Parallel loading is reactivated. I could not find any bugs until during random tests Patrick Plitzner
01:45 PM feature request #7533 (Closed): add typeStatus filter to registration list
new ticket with extended requirements: #7610 Andreas Kohlbecker
01:43 PM bug #7528: Allow changing the Registration status in the RegistrationWorkingsetEditor
Henning created an new and closely related ticket: #7618 Andreas Kohlbecker
01:41 PM task #7425 (Closed): Implement VerbatimTimeField for cdm-vaadin and use this in the ReferencePopu...
done and working Andreas Kohlbecker
01:40 PM bug #7353 (Closed): SpecimenTypedesignationsWorkingsetEditor: error on saving after changing kind...
Andreas Kohlbecker
01:38 PM bug #7353: SpecimenTypedesignationsWorkingsetEditor: error on saving after changing kindOfUnit
this no longer happens Andreas Kohlbecker
01:40 PM bug #7354 (Closed): DerivedUnitConverter handles associated SpecimenTypeDesignation correctly
seems to work Andreas Kohlbecker
01:37 PM task #7343 (Closed): PersonField allows editing the nomenclaturalTitle
works!!! Andreas Kohlbecker
01:37 PM task #7338 (Closed): Validate taxon name against the higher taxon name
works as expeceted Andreas Kohlbecker
01:36 PM feature request #7462 (Rejected): references in type footnotes are clickable links
Yes, no longer needed. Andreas Kohlbecker
01:31 PM feature request #7595 (Closed): PhycoBank Portal - Order Reference name
ok, maybe we could add one line space below the taxon name. Andreas Kohlbecker
01:28 PM feature request #7496 (Closed): TaxonNodes in cdm_taxontree can either link to taxon or reference...
fully solved and tested Andreas Kohlbecker
01:26 PM feature request #7495 (Closed): Registration page implemented
Is ready even if some bugs exists for which we have other tickets, closing this issue. Andreas Kohlbecker
01:24 PM feature request #7494 (Closed): RegistrationSearch implemented
Andreas Kohlbecker
01:24 PM feature request #7620 (Closed): RegistrationSearch implemented with Reference filter

* Reference (like search with wildcard)
see #7494
Andreas Kohlbecker
01:22 PM bug #7592 (Closed): Search Button PhycoBank Test
resolved and tested, add commit? Andreas Kohlbecker
11:59 AM feature request #7619 (New): PhycoBank ID Lesbarkeit im Vaadin Editor
Gute Idee: Im Modus preparation ist die ID etwas heller.
Schlecht: Überlagerung der ID mit den dunklen Elementen b...
Wolf-Henning Kusber
11:46 AM feature request #7618 (Duplicate): PhycoBank Curator rights
Curator can search "preparation", "ready", "curation" = user rights.
Curator needs"publish", "rejected"; add to cu...
Wolf-Henning Kusber
07:55 AM bug #7542 (Closed): Move synonym of homotypical group to taxon does not move the homotypical grou...
reviewed code and functionality in Editor. Seems good Patrick Plitzner

08/02/2018

05:52 PM bug #7617: Specimen TypesDesignations Editor - aus dem Editor heraus neu angelegter CollectionCod...
Korrektur: Collection NMW, Cardiff (IH Code) Wolf-Henning Kusber
05:49 PM bug #7617 (Closed): Specimen TypesDesignations Editor - aus dem Editor heraus neu angelegter Coll...
http://test.e-taxonomy.eu/cdmserver/phycobank_production/app/registration#!workingset/d547a306-fb43-474d-88df-41a91ae... Wolf-Henning Kusber
02:42 PM task #7546 (Closed): Better guidance for users when creating registrations for exising names
Label with explanations updated according to suggestion. Andreas Kohlbecker
01:32 PM bug #7615: Registrations not searchable in the PhycoBank portal
We definitely need to extend the search so that typified names are also covered by the search. ... new ticket: #7621 Andreas Kohlbecker
01:29 PM bug #7615: Registrations not searchable in the PhycoBank portal
data issue solved, name added to registration Andreas Kohlbecker
11:39 AM bug #7615 (Feedback): Registrations not searchable in the PhycoBank portal
The search behaves correctly. "Planothidium taeansa" is not found because there is no registration for the name "Plan... Andreas Kohlbecker
10:33 AM bug #6971: Collect all remaining appearances of multiple representation exceptions since 4.10
mail of WHK:
Hallo zusammen,
ein Problem beim Datacleaning:
Porphyra
Hatte eine ungeparste „generic“ Referen...
Katja Luther

08/01/2018

06:23 PM bug #7616 (Closed): reference page: show name types
The specimen table header is shown even when only name types are available. The name types should be displayed correc... Andreas Kohlbecker
05:53 PM bug #7615 (In Progress): Registrations not searchable in the PhycoBank portal
ID-Suche = Perfekt, alle 10 Fälle, in denen keine Anzeige erfolgte, funktionieren jetzt über die ID-Suche
Was im A...
Wolf-Henning Kusber
05:43 PM bug #7615: Registrations not searchable in the PhycoBank portal
ready for review. Andreas Kohlbecker
05:43 PM bug #7615 (Resolved): Registrations not searchable in the PhycoBank portal
Applied in changeset commit:cdm-dataportal|bb177c82fe3bf3c699fd30817cd82167f14fe47f. Andreas Kohlbecker
05:35 PM bug #7615 (In Progress): Registrations not searchable in the PhycoBank portal
This happens because the dataportal sends an empty querystring for the scientific name and the webservice is not igno... Andreas Kohlbecker
05:14 PM bug #7615 (Closed): Registrations not searchable in the PhycoBank portal
100002 Planothidium taeansa
100003 Planothidium naradoense
sind im Vaadin Editor über die Nummer suchbar
http://...
Wolf-Henning Kusber
02:27 PM bug #7614: IndexOutOfBoundsException after deleting in bulkeditor
PS: Das scheint an dem Record selbst zu liegen. Katja Luther
02:24 PM bug #7614 (Closed): IndexOutOfBoundsException after deleting in bulkeditor
mail of WB:
Hallo,
beim Springen auf einen Listeneintrag nach durchgeführtem Delete eines anderen bekomme ich u....
Katja Luther
11:07 AM feature request #7613 (New): Vaadin: Fehlervermeidung bei Anlegen einer Referenz
Wunsch: Dass bei der Eingabe einer Referenz der häufigste Fall eingestellt ist.
D.h. Wird eine neue Referenz angel...
Wolf-Henning Kusber

07/31/2018

06:13 PM feature request #7612 (New): CacheStrategy for MediaSpecimens
The DerivedUnitFacadeCacheStrategy has no support for `MediaSpecimen`s.
see #7608 for which the creation of a stri...
Andreas Kohlbecker
06:11 PM feature request #7611: media types with media uris are clickable
Good idea, than the "[icon]" string makes really sense. Wolf-Henning Kusber
05:59 PM feature request #7611 (Feedback): media types with media uris are clickable
It would be much easier to implement if the "[icon]" text would be clickable instead.
What do you think about this...
Andreas Kohlbecker
05:57 PM feature request #7611 (Closed): media types with media uris are clickable

Media types should be rendered in the following form depending on their type:
* **unpublished** (has collection ...
Andreas Kohlbecker
06:00 PM bug #7608 (Resolved): TypeDesignationSetManager: string representations for media types are missing
completely solved, please review Andreas Kohlbecker
02:57 PM bug #7608 (In Progress): TypeDesignationSetManager: string representations for media types are mi...
Andreas Kohlbecker
12:12 PM bug #7608 (Closed): TypeDesignationSetManager: string representations for media types are missing

Media types are currently represented as:
* Antigua and Barbuda. Holotype,
After the comma data is missing.
...
Andreas Kohlbecker
05:11 PM feature request #7610 (Duplicate): Type search in PhycoBank Portal
List of „Type desgnation status“
Automatic Kommentar: unverständlich und unnötig
Epitype Kommentar: wichtig
Holo...
Wolf-Henning Kusber
02:36 PM task #7596 (In Progress): PhycoBank Portal - Formatting
Andreas Kohlbecker
10:24 AM task #7596: PhycoBank Portal - Formatting
Nein, stört überhaupt nicht. Wolf-Henning Kusber
10:24 AM task #7596: PhycoBank Portal - Formatting
Wolf-Henning Kusber wrote:
> zu 7: Okay, wenn wir hier zwischen Vaadin User Interface und EDIT Portal unterscheiden ...
Andreas Kohlbecker
10:11 AM task #7596: PhycoBank Portal - Formatting
zu 7: Okay, wenn wir hier zwischen Vaadin User Interface und EDIT Portal unterscheiden können. Im Vaadin UI stören mi... Wolf-Henning Kusber
01:47 PM bug #7544 (Resolved): Dragging a misapplication onto itself throws an exception in name editor
Katja Luther
01:46 PM bug #7544 (In Progress): Dragging a misapplication onto itself throws an exception in name editor
As a first implementation d&d for concept relations are not provided anymore.
For d&d to another name editor I crea...
Katja Luther
01:44 PM bug #7544 (Resolved): Dragging a misapplication onto itself throws an exception in name editor
Applied in changeset commit:taxeditor|b7e704af02bbd5214b09e110244470ab1969ad2a. Katja Luther
11:27 AM bug #7544: Dragging a misapplication onto itself throws an exception in name editor
Katja Luther wrote:
> I removed the possiblity to drop at a misapplied name, but should it be possible to drag a mis...
Andreas Müller
11:00 AM bug #7544 (In Progress): Dragging a misapplication onto itself throws an exception in name editor
I removed the possiblity to drop at a misapplied name, but should it be possible to drag a misapplied name and drop i... Katja Luther
01:46 PM feature request #7609 (New): drag & drop misapplied names from one name editor to another editor
copied from #7544:
To me it does not make sense to d&d a misapplication (or a ppSyn) within a name editor at all. We...
Katja Luther
01:27 PM task #7420: Import for higher taxon graph for phycobank
Hi, here comes the spread sheet with the first data for the import: attachment:Algen_Syllabus_NormalImplied_Test.xls
...
Andreas Kohlbecker
01:19 PM bug #7603: Changing a user group does not work as expected
the collection of groups in user was not correctly updated. Katja Luther
01:19 PM bug #7603 (Resolved): Changing a user group does not work as expected
Applied in changeset commit:taxeditor|78b5b7f70fef88f8a0bebba7aa3f5e7d85545514. Katja Luther
12:19 PM feature request #7429 (Resolved): Improve parsing and formatting for VerbatimTimePeriod
Applied in changeset commit:cdmlib|f8c23aa7bed4470dc98635a7880dee45456979e0. Andreas Müller
11:57 AM task #7607 (Closed): TypeDesignationSetManager: remove brackets from type representations
Andreas Kohlbecker
11:57 AM task #7607 (Resolved): TypeDesignationSetManager: remove brackets from type representations
Applied in changeset commit:cdmlib|223a5fd3159ad97f0742a2baf1e9c594bb454fd1. Andreas Kohlbecker
11:55 AM task #7607 (Closed): TypeDesignationSetManager: remove brackets from type representations
Type representations are currently enclosed in brackets:
"*Type: Tanzania, United Republic of, River Baka, Konde-L...
Andreas Kohlbecker
11:56 AM bug #7593: Vaadin Layout Section Drop down
Wäre eine pragmatische Idee, ich müsste aber schauen, ob das praxisgerecht ist.
Mit Hinblick auf den Bulk-Editor,...
Wolf-Henning Kusber
11:48 AM bug #7593: Vaadin Layout Section Drop down
das ist ein anderes problem und hat mit zu langen titeln in der Auswahlliste zu tun. Vielleicht sollten wir die maxim... Andreas Kohlbecker
11:42 AM bug #7593: Vaadin Layout Section Drop down
Der Fehler tritt noch bei "New Registration" im drop down von "Choose from existing publications" auf. Das Bild in m... Wolf-Henning Kusber
11:25 AM bug #7593: Vaadin Layout Section Drop down
bitte nochmal testen, jetzt ist der server up to date. Andreas Kohlbecker
11:45 AM bug #7505 (Closed): IllegalStateException: Multiple representations problem when adding Annotatio...
I could no longer reproduce this issue. I am closing the ticket therefore. Andreas Kohlbecker
11:08 AM bug #7606 (New): kompact display of CDM Point data
Point data like the exact location in gathering events should be displayed in a compact form including the
* sexa...
Andreas Kohlbecker
10:44 AM bug #6563: Display altitude, distance to Ground and watersurface correct handling of freetext
Applied in changeset commit:cdm-dataportal|dbc2bfa999e320fefb994358f70c28a612ee2f10. Andreas Kohlbecker
09:33 AM bug #6563 (Resolved): Display altitude, distance to Ground and watersurface correct handling of ...
Reopen for review as the freetext issue is not covered by #7578.
(Also I would prefer "Duplicate", not "Rejected"...
Andreas Müller
10:31 AM bug #7542: Move synonym of homotypical group to taxon does not move the homotypical group correctly
Applied in changeset commit:taxeditor|f210d45341a085e74c27ab2eadb0dedb9c9c7ae2. Katja Luther

07/30/2018

09:56 PM bug #7555: TaxonServiceImpl.findTaxaAndNames() broken for cichoriae searching for "Lapsana communis"
By the way, on production I got 21 results, on test only 20 (with the above tests) so data might have slightly changed. Andreas Müller
09:53 PM bug #7555 (Feedback): TaxonServiceImpl.findTaxaAndNames() broken for cichoriae searching for "Lap...
I can reproduce this on production with the given URL, but I can NOT reproduce on
* test: http://test.e-taxonomy...
Andreas Müller
07:14 PM task #7596: PhycoBank Portal - Formatting
Hallo Henning,
zu 7)
Diese Klammern kann ich probelmlos entfernen, sie werden derzeit nur bei phycobank spezifi...
Andreas Kohlbecker
06:40 PM bug #7538: Concurrent editing transaction strategy: Taxon turned into synonym by other user prior...
Andreas Kohlbecker wrote:
> **NOTE:** A general problem or caveat of the data in the audit tables are lacking a time...
Andreas Müller
06:12 PM bug #7538: Concurrent editing transaction strategy: Taxon turned into synonym by other user prior...
Patrick Plitzner wrote:
> This could also be related to the same problem of concurrent editing:
>
> "...mal wiede...
Andreas Müller
06:39 PM bug #7605 (Closed): harmonize cdm_tagged_text_to_markup() with tagged text strategy in cdmlib
Andreas Kohlbecker
06:39 PM bug #7605 (Resolved): harmonize cdm_tagged_text_to_markup() with tagged text strategy in cdmlib
Applied in changeset commit:cdm-dataportal|0f129a6f839fddb958d1217ddaa1bd8319b06991. Andreas Kohlbecker
06:37 PM bug #7605 (Closed): harmonize cdm_tagged_text_to_markup() with tagged text strategy in cdmlib
see `eu.etaxonomy.cdm.strategy.cache.TaggedCacheHelper` for reference impelmentations Andreas Kohlbecker
06:36 PM feature request #7604 (New): Add user to AuditEvent
Especially for delete events it is difficult to find out **who** did run the event as created_by and updated_by is al... Andreas Müller
06:24 PM bug #7505: IllegalStateException: Multiple representations problem when adding Annotation to name...
What is the current state here? For the release we should revert to non parallel loading I think as there are a coupl... Andreas Müller
05:52 PM bug #7602 (Closed): reference page: proper formating of taxonnames in registration summries
Andreas Kohlbecker
05:51 PM bug #7602 (Resolved): reference page: proper formating of taxonnames in registration summries
Applied in changeset commit:cdm-dataportal|afe99f4d4011a82f6232d6066b78d535321969df. Andreas Kohlbecker
04:33 PM bug #7602 (Closed): reference page: proper formating of taxonnames in registration summries
Name in registration summaries are rendered completely in italics even rank labels are italic
retrieve tagged titles...
Andreas Kohlbecker
05:17 PM bug #7541: Insufficient rights lead to missing focus in name editor
moved the second part of the description to a new ticket: #7603 Andreas Müller
05:12 PM bug #7541: Insufficient rights lead to missing focus in name editor
we should urgently address the rights issues in taxeditor. Otherwise soon all users that should have limited rights w... Andreas Müller
05:15 PM bug #7603 (Closed): Changing a user group does not work as expected
Copied from #7541:
Da gleich der nächste Bug: Wenn man im Person Editor bereits eine Gruppe zugeordnet hatte (in d...
Andreas Müller
04:47 PM bug #7537: Taxeditor can not connect to restarted, added cdm instance
Not sure if this is really a taxeditor ticket. However, we should test (and fix it soon).
KL/PP can you please de...
Andreas Müller
04:30 PM bug #7542: Move synonym of homotypical group to taxon does not move the homotypical group correctly
Please also remove the current taxon from the search dialog.
Patrick, can you however to the review already for th...
Andreas Müller
04:05 PM bug #7601 (Closed): date published time period in reference page shows 'to' even if end date is m...
Andreas Kohlbecker
04:04 PM bug #7601 (Resolved): date published time period in reference page shows 'to' even if end date is...
Applied in changeset commit:cdm-dataportal|c0223d83af6fcd3403f41662078ab48d929bab1f. Andreas Kohlbecker
01:24 PM bug #7601 (Closed): date published time period in reference page shows 'to' even if end date is m...
Andreas Kohlbecker
03:42 PM bug #7593: Vaadin Layout Section Drop down
Fehler tritt im Test-System noch auf. Wolf-Henning Kusber
03:36 PM feature request #7594: RegistrationWorkingsetEditor click on new serveral times
"new name" is meant.
After clicking on "new name" the system needs some time to open the next form/dialog. If the bl...
Wolf-Henning Kusber
10:05 AM feature request #7594 (Feedback): RegistrationWorkingsetEditor click on new serveral times
can you please elaborate your request a bit more?
I don't quite understand which button you are referring to. The R...
Andreas Kohlbecker
03:23 PM bug #7592: Search Button PhycoBank Test
http://test.e-taxonomy.eu/dataportal/preview/phycobank/
Firefox
Seite vollständig geladen
Wolf-Henning Kusber
09:45 AM bug #7592 (Feedback): Search Button PhycoBank Test
Ich habe keine Probleme mit dem Search-button-icon.
Wurde die Seite denn vollständig geladen oder war sie noch ni...
Andreas Kohlbecker
01:53 PM feature request #7429 (In Progress): Improve parsing and formatting for VerbatimTimePeriod
Andreas Müller
01:05 PM feature request #7600 (Closed): public setters for entity collections
In model classes the setters for entity collections are protected or do not exist at all.
Only add*() and remove*() ...
Andreas Kohlbecker
01:00 PM feature request #7599 (In Progress): treeView for specimen data in dataportal
The current implementation provides all specimen with the whole tree with the first WS call, is it better to get firs... Katja Luther
12:37 PM feature request #7599 (In Progress): treeView for specimen data in dataportal
The specimen tab/page section should show the tree structure of the specimen. To avoid performance problems the data ... Katja Luther
10:27 AM feature request #7595: PhycoBank Portal - Order Reference name
please review Andreas Kohlbecker
10:23 AM feature request #7595 (Resolved): PhycoBank Portal - Order Reference name
Applied in changeset commit:cdm-dataportal|84e766b2d336588cb073dab03de2f547ac3f16c6. Andreas Kohlbecker
09:28 AM feature request #7598 (New): Grouping of Restrictions implemented
Since solving #7590 it is possible to logically combine Restrictions by AND and OR. To allow for really flexible sear... Andreas Kohlbecker

07/27/2018

09:11 PM bug #7593 (Duplicate): Vaadin Layout Section Drop down
this is rather a duplicate of #7593 than a subtask Andreas Kohlbecker
11:21 AM bug #7593 (Duplicate): Vaadin Layout Section Drop down
Drop down in Layout insert section not stable.
S.h. das Drop down Menue springt, wird breiter und schiebt damit das...
Wolf-Henning Kusber
09:10 PM bug #7591 (Closed): Vaadin Layout Reference new
Andreas Kohlbecker
09:09 PM bug #7591 (Resolved): Vaadin Layout Reference new
Applied in changeset commit:cdmlib|6f6eaedfdbbc6c717dd37d2403ac60d7d09d0fb9. Andreas Kohlbecker
10:51 AM bug #7591 (Closed): Vaadin Layout Reference new
Layout-Problem Reference new
![](Layout-vaadin-reference-new.PNG)
Wolf-Henning Kusber
03:26 PM feature request #7597 (Closed): Aggregate and persist descriptions on taxon level
~~The aggregation will be done on taxon level with already aggregated/computed descriptions.~~
as decided in the l...
Patrick Plitzner
02:34 PM bug #7588 (Closed): ToOneRelatedEntityCombobox: edit button must not be enabled when value is null
Andreas Kohlbecker
02:19 PM task #7596: PhycoBank Portal - Formatting
Achtung, automatische Nummerierung stimmt nicht mit Screenshot überein. Wolf-Henning Kusber
02:11 PM task #7596 (Closed): PhycoBank Portal - Formatting
See screen shot below or (http://test.e-taxonomy.eu/dataportal/preview/phycobank/cdm_dataportal/reference/b2741740-7d... Wolf-Henning Kusber
02:12 PM feature request #7572 (Resolved): SpecimenTypeDesignationEditor: Collection combobox shows collec...
please review. Andreas Kohlbecker
01:53 PM feature request #7590 (Resolved): findByTitleWithRestrictions allows combining Restrictions by OR
Andreas Kohlbecker
08:40 AM feature request #7590 (In Progress): findByTitleWithRestrictions allows combining Restrictions by OR
Andreas Kohlbecker
01:40 PM feature request #7595 (Closed): PhycoBank Portal - Order Reference name
Change 1)in Reference 2) Name string to
1) Name string (2) in Reference
![](PhycoBank_Portal_Ref_Name.PNG)
Wolf-Henning Kusber
11:47 AM feature request #7594 (Closed): RegistrationWorkingsetEditor click on new serveral times
Vaadin Registration Workingset Editor
Click on "new name" starts a new name popup editor. The blue progressbar on ...
Wolf-Henning Kusber
10:56 AM bug #7592 (Closed): Search Button PhycoBank Test
TestPortal PhycoBank, Firefox 61.0.1 (64-Bit)
Bug: icon for search not visible.
![](Bug-Portal-PhycoBank.PNG)
Wolf-Henning Kusber

07/26/2018

02:37 PM feature request #7572 (In Progress): SpecimenTypeDesignationEditor: Collection combobox shows col...
Andreas Kohlbecker
02:36 PM feature request #7572: SpecimenTypeDesignationEditor: Collection combobox shows collection.code a...
The CdmFilterablePagingProvider is not yet including the institution titlecache in the search.
For this to impleme...
Andreas Kohlbecker
02:35 PM feature request #7590 (Closed): findByTitleWithRestrictions allows combining Restrictions by OR
see #7572#note-2 for details Andreas Kohlbecker
02:13 PM bug #7588 (Resolved): ToOneRelatedEntityCombobox: edit button must not be enabled when value is null
Applied in changeset commit:cdm-vaadin|2965ff8869dba39344151eee9da003154865dc48. Andreas Kohlbecker
01:13 PM bug #7588 (Closed): ToOneRelatedEntityCombobox: edit button must not be enabled when value is null
The edit button of the ToOneRelatedEntityCombobox is enabled even if the value is null. Andreas Kohlbecker
01:36 PM feature request #7589: Performance, UX and stability patches for CharacterMatrix
changes:
commit:taxeditor|b4f09ad3c826e81124053685a7d946a3c9b10778
commit:taxeditor|b5a4b38f8c40957ef909259004fa5...
Patrick Plitzner
01:34 PM feature request #7589 (Closed): Performance, UX and stability patches for CharacterMatrix
This ticket is for collecting all the changes done to improve the stability and performance and the user experience o... Patrick Plitzner
11:48 AM bug #7366: TeamOrPersonField readonly if users lacks edit permissions
setting the datasource to readonly as it was implemented for this issue was causing problems with the ToOneRelatedEnt... Andreas Kohlbecker
11:47 AM bug #7586: com.vaadin.data.Property$ReadOnlyException on opening TypeSpecimenWorkingsetEditor
This should be solved now! Andreas Kohlbecker
11:41 AM bug #7586: com.vaadin.data.Property$ReadOnlyException on opening TypeSpecimenWorkingsetEditor
for solving #7366 the datasource is set in `TeamOrPersonField.adaptToUserPermissions()` to readonly if the the lacks ... Andreas Kohlbecker
08:07 AM bug #7586 (Resolved): com.vaadin.data.Property$ReadOnlyException on opening TypeSpecimenWorkingse...
Applied in changeset commit:cdm-vaadin|bbdd609fd9f9a504f0225c98ce01c8f4b19931f9. Andreas Kohlbecker
08:05 AM bug #7586 (Closed): com.vaadin.data.Property$ReadOnlyException on opening TypeSpecimenWorkingsetE...
This ReadOnlyException is thrown when a user with insufficient privileges for editing the collector related to a Fiel... Andreas Kohlbecker
08:21 AM task #7587 (New): ToOneRelatedEntityReloader to listen and operate on PropertyDatasources directly?
This idea came up while working on #7586.
Currently the `ToOneRelatedEntityReloader` is attached as `ValueChangeLi...
Andreas Kohlbecker

07/25/2018

07:18 PM task #7573 (Closed): CollectionPopEditor superCollection only visible for advanced users
Andreas Kohlbecker
04:48 PM bug #7585 (Closed): RegistrationCuratorRoleProbe does not only check the ROLE_CURATION

the check done in this class seems wrong:
~~~java
return a.equals(RolesAndPermissions.ROLE_CURATION)
...
Andreas Kohlbecker
04:36 PM feature request #7572 (Resolved): SpecimenTypeDesignationEditor: Collection combobox shows collec...
Applied in changeset commit:cdm-vaadin|d7edf1e089bd6f3a63904f86bf6160aaa4d1839a. Andreas Kohlbecker
04:21 PM feature request #7570: Institution editor implemented
implemented with basic set of fields covering
* name
* code
* part of other institution
according to #7571 : ...
Andreas Kohlbecker
04:19 PM feature request #7570 (Resolved): Institution editor implemented
Applied in changeset commit:cdm-vaadin|90e5b45a71c8b48e029fbbbc5d0393022f0f041e. Andreas Kohlbecker
04:19 PM feature request #7571 (Resolved): Collection editor has field to select and edit the institution
Applied in changeset commit:cdm-vaadin|1faff10b568bf292fda37d44a8dd1502de16efcb. Andreas Kohlbecker
11:00 AM bug #7543: Name Editor does not auto-scroll during dragging
this is not as easy as it seems, we need to write our own listener which listen on the mouse position and scrolls, wh... Katja Luther
08:26 AM feature request #7584 (New): Display unscary notification instead of "delete operation was abbord...
The error box which is currently shown after the attempt to delete a cdm entity which is still used by other entities... Andreas Kohlbecker
07:58 AM bug #7583 (Resolved): NPE on logout in registration list view
Applied in changeset commit:cdm-vaadin|10d75c612b4f8c6a2fed7ebe8f402d18917af536. Andreas Kohlbecker
07:57 AM bug #7583 (Closed): NPE on logout in registration list view

…und beim Logout:
~~~~
com.vaadin.server.ServerRpcManager$RpcInvocationException: Unable to invoke method click...
Andreas Kohlbecker

07/24/2018

06:17 PM feature request #7551 (Closed): TypeDesignationSetManager provides summary as TaggedText
Andreas Kohlbecker
06:15 PM feature request #7551 (Duplicate): TypeDesignationSetManager provides summary as TaggedText
duplicate of #7348 Andreas Kohlbecker
06:13 PM bug #6695 (Closed): module cdmlib/services should not be an osgi bundle
Andreas Kohlbecker
06:13 PM bug #6695: module cdmlib/services should not be an osgi bundle
this has been solved by adding the following pluginExecution configuration to cdmlib/lifecycle-mapping-metadata.xml w... Andreas Kohlbecker
06:06 PM bug #7358 (Closed): Show warning when browser history back is used while popup editors are open
Andreas Kohlbecker
06:05 PM bug #7358 (Resolved): Show warning when browser history back is used while popup editors are open
Applied in changeset commit:cdm-vaadin|26e068777f74a5d5f07ac19a4ce727eecc16093d. Andreas Kohlbecker
04:11 PM bug #7582 (Duplicate): prevent from creating empty registrations
The RegistrationWorkinsetEditor leaves empty registrations in the database when a new 'typification only registration... Andreas Kohlbecker
03:59 PM bug #7542: Move synonym of homotypical group to taxon does not move the homotypical group correctly
please review Katja Luther
03:58 PM bug #7542 (Resolved): Move synonym of homotypical group to taxon does not move the homotypical gr...
Applied in changeset commit:cdmlib|eb95398b963a25d0d4d48bff12767dd4cd984de4. Katja Luther
03:37 PM bug #6379 (Worksforme): specimens of lectotypes not shown in portal
it seems as this has been fixed meanwhile. Andreas Kohlbecker
03:20 PM feature request #7462 (Feedback): references in type footnotes are clickable links
is this still needed with the new registration page? Andreas Kohlbecker
03:15 PM feature request #7581 (New): TaxonNamePopEditor: support for editing of all name relationships
Currently the TaxonNamePopEditor allows editing of basionyms, and of validations as well as replaced synonyms.
The...
Andreas Kohlbecker
02:53 PM feature request #7580 (In Progress): User wishes: CharacterMatrix
* enter values in multiple cells simultanously
* copy&paste cell value (maybe via dragging)
Patrick Plitzner
02:49 PM bug #7579 (New): Set up pipelines in Jenkins to relace the build pipelines
Our jenkins setup are using the [build-pipeline-plugin](https://plugins.jenkins.io/build-pipeline-plugin).
Since J...
Andreas Kohlbecker
02:41 PM bug #7578: preseve null values in all mesurements during serialization of webservice responses
review by checking the example record here: http://test.e-taxonomy.eu/dataportal/preview/cichorieae/cdm_dataportal/ta... Andreas Kohlbecker
02:38 PM bug #7578 (Resolved): preseve null values in all mesurements during serialization of webservice r...
Applied in changeset commit:cdmlib|d9f51acb041832197601f3343f4d3f6fd777b888. Andreas Kohlbecker

07/23/2018

01:10 PM bug #6563 (Rejected): Display altitude, distance to Ground and watersurface correct handling of ...
Rejecting this issue as only the symptom is described here.
The actual cause is false serialization of Double value...
Andreas Kohlbecker
01:08 PM bug #7578 (Closed): preseve null values in all mesurements during serialization of webservice res...
as reported in #6563 the double values which are `null` are serialized as `0.0` by json-lib this is plain wrong for a... Andreas Kohlbecker
12:20 PM bug #7577: Set Publish Flag for Subtree Dialog - Further Problems with Progressmonitor
In the end the cdm-remote instance crashed with a `java.lang.OutOfMemoryError: Java heap space` even if it has been s... Andreas Kohlbecker
12:18 PM bug #7577: Set Publish Flag for Subtree Dialog - Further Problems with Progressmonitor
A anylysis of the staktrace kane with jstack revels that it is `hibernate.search` taking all the CPU in order to inde... Andreas Kohlbecker
11:52 AM bug #7577: Set Publish Flag for Subtree Dialog - Further Problems with Progressmonitor
I tested again.
This time I set the publish flag to true, all taxa an synonmys intially are publish = false:
...
Andreas Kohlbecker
10:41 AM bug #7577 (New): Set Publish Flag for Subtree Dialog - Further Problems with Progressmonitor

Summarizing the insights from this examination I come to the conclusion that we need to work on the following:
1...
Andreas Kohlbecker
10:41 AM bug #7576 (Feedback): Set Publish Flag for Subtree Dialog - Problems with Progressmonitor
Andreas Kohlbecker
10:34 AM bug #7576: Set Publish Flag for Subtree Dialog - Problems with Progressmonitor
Hallo Katja,
ich weiß, dass du an diesem Problem gearbeitet hast, konnte aber kein Ticket dazu finden. Daher habe ...
Andreas Kohlbecker
10:30 AM bug #7576 (Closed): Set Publish Flag for Subtree Dialog - Problems with Progressmonitor
Setzen des Publish-Flags auf der kompletten Cichorienklassifikation:

Die Prozentanzeige bleibt bei 54.95% stehen ...
Andreas Kohlbecker

07/20/2018

05:42 PM bug #7557 (Resolved): TaxonNamePopEditor: com.vaadin.data.Property$ReadOnlyException on saving a ...
Andreas Kohlbecker
05:42 PM bug #7557 (Feedback): TaxonNamePopEditor: com.vaadin.data.Property$ReadOnlyException on saving a ...
I can no longer reproduce this issue since #7574 is fixed.
Henning, please try be yourself to reproduce this bug. ...
Andreas Kohlbecker
11:31 AM bug #7557: TaxonNamePopEditor: com.vaadin.data.Property$ReadOnlyException on saving a sub popup e...
[another report of the same bug:]
Lieber Andreas,

http://test.e-taxonomy.eu/cdmserver/phycobank_production/a...
Andreas Kohlbecker
05:34 PM bug #7574: IllegalStateException: Multiple representations ... when saving ReferenceEditor with ...
I hope and think that this issue is finally fixed now.
please review.
Andreas Kohlbecker
05:07 PM bug #7574 (Resolved): IllegalStateException: Multiple representations ... when saving ReferenceE...
Applied in changeset commit:cdm-vaadin|1641827e91d78dc483e225d1265e88d317e5d981. Andreas Kohlbecker
01:06 PM bug #7574 (Closed): IllegalStateException: Multiple representations ... when saving ReferenceEdi...
IllegalStateException: Multiple representations when saving ReferenceEditor with in Refercence
This happens when c...
Andreas Kohlbecker
05:27 PM bug #7558 (Duplicate): IllegalStateException: Multiple representations ... when saving first typ...
resolved also through the changes made for #7574, so this is clearly a duplicate Andreas Kohlbecker
01:10 PM feature request #7575 (Closed): Implement advanced quantitative cell editor
Editor should have two states:
* Edit a list of exact values
* edit aggregated values like min, max, etc.
Impr...
Patrick Plitzner
12:08 PM task #7573 (Closed): CollectionPopEditor superCollection only visible for advanced users
super collection field only visible for selected users (Role=CURATOR|ADMIN)
First of all can the concept of the su...
Andreas Kohlbecker
12:02 PM feature request #7572 (Closed): SpecimenTypeDesignationEditor: Collection combobox shows collecti...
this is required because ...
Fall 3: Es gibt einen Code, der identisch mit einen Index Herbariorum Code ist (NWU) ...
Andreas Kohlbecker
12:00 PM feature request #7571 (Closed): Collection editor has field to select and edit the institution
Wenn alle Institutionen einen Code haben, ist alles fein.

Normaler Weise gibt es 3 Fälle:
Fall 1: Code nac...
Andreas Kohlbecker
11:58 AM feature request #7570 (Closed): Institution editor implemented
An InstitutionPopupEditor is urgently needed for Collection and also important for References Andreas Kohlbecker
10:54 AM feature request #7569: SpecimenTypeDesignationEditor: Typedesignations should be ordered
fixed and ready for review. Andreas Kohlbecker
10:53 AM feature request #7569 (Resolved): SpecimenTypeDesignationEditor: Typedesignations should be ordered
Applied in changeset commit:cdm-vaadin|6055cbe049e1e8d7db866c07419c26f705acb5f8. Andreas Kohlbecker
10:52 AM feature request #7569 (Closed): SpecimenTypeDesignationEditor: Typedesignations should be ordered
[requested by Henning]:
Anfrage zur Sortierung der Typen:
Zeitlich und logisch gebe ich zuerst den Lectotypus an,...
Andreas Kohlbecker
10:28 AM bug #7566 (Resolved): TeamOrPersonField: some Persons can not be selected
Andreas Kohlbecker
08:34 AM bug #7566: TeamOrPersonField: some Persons can not be selected
These problems are related to the changes made for #7535
The root cause is the code line
~~~java
private v...
Andreas Kohlbecker
10:18 AM bug #7567 (Duplicate): SpecimenTypeDesignationEditor: Collection selection only set at second sel...
duplicate of #7566 Andreas Kohlbecker
10:14 AM bug #7568 (Closed): SpecimenTypeDesignationEditor: Collector Field not following the readonly sta...
Andreas Kohlbecker
10:13 AM bug #7568 (Resolved): SpecimenTypeDesignationEditor: Collector Field not following the readonly s...
Applied in changeset commit:cdm-vaadin|7278c990f5a49dd1a0fd17d9cd705717cfd4279f. Andreas Kohlbecker
08:56 AM bug #7568 (Closed): SpecimenTypeDesignationEditor: Collector Field not following the readonly sta...
Andreas Kohlbecker

07/19/2018

06:09 PM bug #7567 (Duplicate): SpecimenTypeDesignationEditor: Collection selection only set at second sel...
reported by Hening:
Auswahl wird beim ersten Auswählen nicht angenommen, erst nach 2. Auswahl.
Andreas Kohlbecker
06:03 PM bug #7566: TeamOrPersonField: some Persons can not be selected
I found one minor issue while investigating this: The NOMENCLATURAL_TITLE was being used for the caption of the coll... Andreas Kohlbecker
05:51 PM bug #7566 (Closed): TeamOrPersonField: some Persons can not be selected
This issue only occurs with some few Persons:
[originally reported by Hennig]
Folgende Eingabeprobleme im speci...
Andreas Kohlbecker
04:37 PM feature request #7496: TaxonNodes in cdm_taxontree can either link to taxon or reference search r...
implemented and ready for testing Andreas Kohlbecker
04:37 PM feature request #7496 (Resolved): TaxonNodes in cdm_taxontree can either link to taxon or referen...
Applied in changeset commit:cdm-dataportal|8a4d078dfa6e2200f5e4b25c28d1bdcb7d82cf7b. Andreas Kohlbecker
03:47 PM task #7565 (New): cdm_taxontree remove all code for using the tree to browse drupal term taxonomies
The cdm_taxontree has been developed to provide dual use:
1. Browse cdm classifications
1. Browse drupal term t...
Andreas Kohlbecker
03:25 PM bug #6356: taxontree sort order as in editor
no longer important for phycobank since we will model the classification with taxon relations Andreas Kohlbecker
03:14 PM feature request #7494: RegistrationSearch implemented
Implemented, please test. There are two ways to perform a search:
1. go to the registration search directly http:/...
Andreas Kohlbecker
03:08 PM task #7561 (Closed): OccurrencePortalController and FieldUnitDTO should not allow passing the det...
all done! Andreas Kohlbecker
03:06 PM feature request #6967 (Closed): RegistrationController identifier endpoints implemented
complete! Andreas Kohlbecker
03:05 PM feature request #7348 (Closed): RegistrationDTO webservices implemented
complete! Andreas Kohlbecker
11:43 AM feature request #7348: RegistrationDTO webservices implemented
Andreas Kohlbecker wrote:
> **TODO:**
>
> remove the following fields from DTO Serialization:
>
> * `typeDesi...
Andreas Kohlbecker
02:58 PM bug #7564 (Closed): remove Phycobank - Registration data - block and other outdated registration ...

~~also remove `render_registrations()` in name.inc?~~ need to keep this method since it is used in reder_taxon_or_n...
Andreas Kohlbecker
02:43 PM task #7562 (Resolved): Specimen table "Associated with" taxon is irritating and needs to be remov...
Hallo Norbert,
nach Rücksprache mit Patrick habe ich erfahren, dass die Anforderung das "assoziierte" Taxon bei de...
Andreas Kohlbecker
02:13 PM bug #7563 (In Progress): requests with %2F in URL are rejected by apache
Andreas Kohlbecker
02:00 PM bug #7563 (Closed): requests with %2F in URL are rejected by apache
requests like http://test.e-taxonomy.eu/cdmserver/phycobank_production/registrationDTO/identifier/http%+3+A%2F%2Fphyc... Andreas Kohlbecker
12:09 PM feature request #7495 (Resolved): Registration page implemented
ready for the review Andreas Kohlbecker

07/18/2018

09:38 PM bug #7554 (Closed): TeamOrPersonField: removing existing team and adding new team leaves nested c...
Thank you for reviewing. I will close this issue now. Andreas Kohlbecker
06:44 PM bug #7554 (Worksforme): TeamOrPersonField: removing existing team and adding new team leaves nest...
New multiauthor teams consisting of existing and new authors can be built without errors. Wolf-Henning Kusber
04:45 PM bug #7554 (Resolved): TeamOrPersonField: removing existing team and adding new team leaves nested...
Andreas Kohlbecker
04:45 PM bug #7554: TeamOrPersonField: removing existing team and adding new team leaves nested components...
With the last commit I no longer can reproduce any of the issues described in this ticket.
Please review.
Andreas Kohlbecker
06:03 PM task #7561 (In Progress): OccurrencePortalController and FieldUnitDTO should not allow passing th...
Andreas Kohlbecker
04:50 PM task #7561: OccurrencePortalController and FieldUnitDTO should not allow passing the determintati...
Point 1) in this issue description was also raised for the data_portal in #6816 as point 4). The "Associated with" in... Andreas Kohlbecker
03:45 PM task #7561 (Closed): OccurrencePortalController and FieldUnitDTO should not allow passing the det...
The OccurrencePortalController allows requests of the form `/portal/occurrence/{uuid}/derivateHierarchy?uuid={taxonUu... Andreas Kohlbecker
05:13 PM bug #6816 (Closed): [Dataportal] Specimen table issues
For me the issue raised in point 4) is not solved or answered satisfyingly. I stumbled over this in the attempt to us... Andreas Kohlbecker
04:59 PM task #7562 (Closed): Specimen table "Associated with" taxon is irritating and needs to be removed...
see issues #6816, #7561 for older information on this.
Andreas Kohlbecker
04:16 PM bug #7547: ToManyRelatedEntitiesComboboxSelect buttons enabled even if the containig editor is re...
the changes for this ticket cause other problems: #7554 Andreas Kohlbecker
03:05 PM bug #7559 (Resolved): possibly corrupted hiberante session after previous error on saving editor
clearing the session only after an exception seems to work by now.
Once it is confirmed that the session problems ...
Andreas Kohlbecker
03:00 PM bug #7559 (Worksforme): possibly corrupted hiberante session after previous error on saving editor
Andreas Kohlbecker
02:23 PM bug #7559: possibly corrupted hiberante session after previous error on saving editor
modified error handling: only clearing the session, no longer closing it in turn of errors commit:cdm-vaadin|a903034c Andreas Kohlbecker
02:21 PM bug #7559: possibly corrupted hiberante session after previous error on saving editor
Closing the session in turn of exceptions seems to cause other problems:
[reported by Henning]
Referenz „Ehrenb...
Andreas Kohlbecker
03:02 PM bug #7560 (Worksforme): LazyInitializationException (LIE) saving TaxonNamePopupEditor caused duri...
This was caused by a change related to #7559 and was fixed with commit:cdm-vaadin|f53fffc Andreas Kohlbecker
02:42 PM bug #7560 (Worksforme): LazyInitializationException (LIE) saving TaxonNamePopupEditor caused duri...

~~~
[phycobank] 14:25:46,718 ERROR [qtp759156157-24][eu.et.va.mv.AbstractPopupEditor] - org.springframework.orm.hi...
Andreas Kohlbecker

07/17/2018

09:28 PM bug #7558 (Resolved): IllegalStateException: Multiple representations ... when saving first type...
Andreas Kohlbecker
05:41 PM bug #7558 (Duplicate): IllegalStateException: Multiple representations ... when saving first typ...
New Registration -> new reference -> with rerenceType mit team (first autor + empty second) -> save -> reopen add fu... Andreas Kohlbecker
05:45 PM bug #7559 (Closed): possibly corrupted hiberante session after previous error on saving editor

this error has possibly been caused by the error documented in #7558
~~~
Jul 17, 2018 4:49:21 PM com.vaadin.s...
Andreas Kohlbecker
05:31 PM bug #7557 (Closed): TaxonNamePopEditor: com.vaadin.data.Property$ReadOnlyException on saving a su...
potentially caused by the same bug as #7574
from the stacktrace it is not clear which popup editor was being saved...
Andreas Kohlbecker
01:02 PM feature request #7494 (Resolved): RegistrationSearch implemented
Applied in changeset commit:cdm-dataportal|a6ae799bf137d61817db96bd5b32bdeed480e09e. Andreas Kohlbecker
12:35 PM bug #7552 (Closed): use TaggedText.entityReference to add style and uuid to html tags
Andreas Kohlbecker
12:35 PM bug #7552 (Resolved): use TaggedText.entityReference to add style and uuid to html tags
Applied in changeset commit:cdm-dataportal|55083981158955cd614c2c59cb4d965581686160. Andreas Kohlbecker
11:03 AM bug #7554 (In Progress): TeamOrPersonField: removing existing team and adding new team leaves nes...
The bug obviously still exists when a Person is added to an existing team. Andreas Kohlbecker
07:15 AM bug #7554: TeamOrPersonField: removing existing team and adding new team leaves nested components...
Hallo Henning,
ich befürchte der Test-Server war noch nicht auf dem neuesten Stand als du getestet hattest. BItte ...
Andreas Kohlbecker
09:42 AM feature request #7217: SpecimenTypedesignationsWorkingsetEditor: Longitute Latitude fields allo...
Known minor point:
On my computer, decimal values are only accepted if a Komma is used. A full stop is ignored by th...
Wolf-Henning Kusber

07/16/2018

09:00 PM bug #7555 (Closed): TaxonServiceImpl.findTaxaAndNames() broken for cichoriae searching for "Lapsa...

the request:
http://api.cybertaxonomy.org/cichorieae/portal/taxon/find.json?doTaxaByCommonNames=1&doMisapplie...
Andreas Kohlbecker
04:33 PM bug #7554: TeamOrPersonField: removing existing team and adding new team leaves nested components...
Problem solved, but not very user-friendly.
http://test.e-taxonomy.eu/cdmserver/phycobank_production/app/registrat...
Wolf-Henning Kusber
04:07 PM bug #7554: TeamOrPersonField: removing existing team and adding new team leaves nested components...
Problems solved, please test. Andreas Kohlbecker
04:06 PM bug #7554 (Resolved): TeamOrPersonField: removing existing team and adding new team leaves nested...
Applied in changeset commit:cdm-vaadin|1fef72149b63a405d436e3174ca513c3e961275b. Andreas Kohlbecker
03:57 PM bug #7554 (Closed): TeamOrPersonField: removing existing team and adding new team leaves nested c...

habe ein Problem mit einem neuen Autorenteam in der Section.
Workingset: http://test.e-taxonomy.eu/cdmserver/phyco...
Andreas Kohlbecker
03:26 PM task #7550: Move UserHelper from cdm-vaadin into cdmlib
can be closed if the changes are not again causing any obvious errors Andreas Kohlbecker
02:49 PM task #7550: Move UserHelper from cdm-vaadin into cdmlib
The `VaadinUserHelper` which was registering itself in the vaadin session was causing problems in the cdm-webapp.war ... Andreas Kohlbecker

07/12/2018

10:26 PM feature request #7348: RegistrationDTO webservices implemented
**TODO:**
remove the following fields from DTO Serialization:
* `typeDesignations`
* `orderdTypeDesignationWo...
Andreas Kohlbecker
10:23 PM task #7527: CdmEntityDaoBase.*ByParam() public and also available in the service layer
please review.
Andreas Kohlbecker
10:19 PM task #7550 (Resolved): Move UserHelper from cdm-vaadin into cdmlib
close if the changes are not causing any obvious errors Andreas Kohlbecker
02:15 PM task #7550 (Closed): Move UserHelper from cdm-vaadin into cdmlib
The `AbstractController` already duplicates some of the methods offered by the UserHelper. The UserHelper for now is... Andreas Kohlbecker
05:44 PM task #7553 (Closed): move TypeDesignationSetManagerIT to cdmlib
the `TypeDesignationSetManager` has been moved (#7348, commit:6e858cb7) to cdmlib but the according test still reside... Andreas Kohlbecker
05:31 PM bug #7552 (Closed): use TaggedText.entityReference to add style and uuid to html tags
TaggedText as provided by the cdmlib not provides TypedEntityReference information in the property TaggedText.entityR... Andreas Kohlbecker
05:06 PM feature request #7551 (Closed): TypeDesignationSetManager provides summary as TaggedText
TypeDesignationSetManager can provide a summary of the ordered type designations. For the dataportal the summary shou... Andreas Kohlbecker
04:58 PM feature request #6967 (Resolved): RegistrationController identifier endpoints implemented
Applied in changeset commit:cdmlib|f9bb9711ec4265c5862d4616477c24fc9a16fa2f. Andreas Kohlbecker
04:56 PM feature request #6967: RegistrationController identifier endpoints implemented
the endpoint `/registration/{localID}` is not needed, is it? Andreas Kohlbecker
02:07 PM task #7546: Better guidance for users when creating registrations for exising names
Dieser 2. Satz ist vielleicht wirklich überflüssig, er beleuchtet lediglich die Hintergünde zu Satz 1.
Ok, streich...
Andreas Kohlbecker
01:48 PM task #7546: Better guidance for users when creating registrations for exising names
Brauchen wir alle 3 Sätze. Der 2. ist schwer verständlich. Bin alles mit unserer native Speakerin durchgegangen. Ihr ... Wolf-Henning Kusber
12:39 PM feature request #7549 (Closed): Show tooltip for data aggregation in character matrix
When hovering over any cell of the summary row a tooltip should show up giving a brief statistical summary of the cur... Patrick Plitzner
10:16 AM feature request #7548 (In Progress): RegistrationWorkingSetEditor loads slowly with big working sets
The RegistrationWorkingSetEditor not only loads slowly when initially opened also when saving a popup editor the work... Andreas Kohlbecker

07/11/2018

03:47 PM task #7527 (Resolved): CdmEntityDaoBase.*ByParam() public and also available in the service layer
Applied in changeset commit:cdmlib|51ee66dc3a639019afbb58811e32c98e0f186b12. Andreas Kohlbecker
03:43 PM task #7527: CdmEntityDaoBase.*ByParam() public and also available in the service layer
... also `public Pager<T> page(Class<? extends T> clazz, String param, String queryString, MatchMode matchmode, List... Andreas Kohlbecker
03:04 PM task #7527 (In Progress): CdmEntityDaoBase.*ByParam() public and also available in the service layer
I implemented `public Pager<T> pageByRestrictions(Class<? extends T> clazz, String param, String queryString, MatchMo... Andreas Kohlbecker
01:31 PM bug #7547 (Closed): ToManyRelatedEntitiesComboboxSelect buttons enabled even if the containig edi...
fixed! Andreas Kohlbecker
01:31 PM bug #7547 (Resolved): ToManyRelatedEntitiesComboboxSelect buttons enabled even if the containig e...
Applied in changeset commit:cdm-vaadin|8a1add900f82f756d5df22205144a50b0deca0cb. Andreas Kohlbecker
01:13 PM bug #7547 (Closed): ToManyRelatedEntitiesComboboxSelect buttons enabled even if the containig edi...
see this screenshot for example:
![](picture507-1.png)
Andreas Kohlbecker
01:07 PM task #7546: Better guidance for users when creating registrations for exising names
done and ready for review.
When reviewing please have extra critical eyeball on the text close to the bottom of t...
Andreas Kohlbecker
01:04 PM task #7546 (Resolved): Better guidance for users when creating registrations for exising names
Applied in changeset commit:cdm-vaadin|cf9c36f82e17e2f5fb613ef6132994544c523a81. Andreas Kohlbecker
11:56 AM task #7546 (In Progress): Better guidance for users when creating registrations for exising names
A dialog is not the best solution, adding the required ui elements to the footer section of the workingset editor is ... Andreas Kohlbecker

07/10/2018

05:32 PM bug #7545 (Closed): IllegalStateException: Multiple representations ... when saving first typeDe...
perfekt! Wolf-Henning Kusber
04:39 PM bug #7545 (Resolved): IllegalStateException: Multiple representations ... when saving first type...
Applied in changeset commit:cdm-vaadin|af8ec722535f95fcccdc5f4fd4562238987d300a. Andreas Kohlbecker
03:56 PM bug #7545: IllegalStateException: Multiple representations ... when saving first typeDesignation...
I reproduced this issue.
Duplicate cdm entities only exist after pressing the save button for the new typedesigna...
Andreas Kohlbecker
02:58 PM bug #7545: IllegalStateException: Multiple representations ... when saving first typeDesignation...
The aftereffects disappeared after restarting the cdm-remote instance. So these secondary problems where most probabl... Andreas Kohlbecker
02:30 PM bug #7545: IllegalStateException: Multiple representations ... when saving first typeDesignation...
Hallo Henning,
durch den ersten Fehler wurde eine Registrierung erzeugt, die keine TypeDesignation hatte. Das sie ...
Andreas Kohlbecker
02:30 PM bug #7545: IllegalStateException: Multiple representations ... when saving first typeDesignation...
Und wenn man nach diesem Identifier sucht gibt es auch eine Fehlermeldung [#!list/inProgress]:
~~~
java.lang.Null...
Andreas Kohlbecker
02:29 PM bug #7545: IllegalStateException: Multiple representations ... when saving first typeDesignation...
Hallo,

nach dem Fehler, konnte ich keine neuen existierenden Namen auswählen (alter Fehler)
nach aus und einlogg...
Andreas Kohlbecker
02:29 PM bug #7545 (Closed): IllegalStateException: Multiple representations ... when saving first typeDe...
Henning reported this error which happened while creating a registration for the existing name *Rhopalodia hirudinifo... Andreas Kohlbecker
03:46 PM bug #7331: AdvancedBeanInitializer fails to initialize properties of preinitialized beans in the ...
Adding exported breakpoints from my eclipse which might help debugging this issue. Andreas Kohlbecker
03:37 PM bug #7523 (Rejected): RegistrationWorkingSetEditor: existing name combobox must only offer names ...
rejected in favor of #7546 Andreas Kohlbecker
12:04 PM bug #7523: RegistrationWorkingSetEditor: existing name combobox must only offer names which are n...
The above change has been applied after receiving the below email:
Hallo,

um vorgesehene Registrierungen (Ty...
Andreas Kohlbecker
03:35 PM task #7546 (Closed): Better guidance for users when creating registrations for exising names
The strategy followed in #7523 effectively blocks creating registrations for existing names, which makes not much sen... Andreas Kohlbecker
12:07 PM feature request #7348 (In Progress): RegistrationDTO webservices implemented
Andreas Kohlbecker
11:15 AM bug #7544 (Closed): Dragging a misapplication onto itself throws an exception in name editor
When dragging and dropping a misapplication onto itself in the taxon name editor the following exception is thrown an... Patrick Plitzner
10:57 AM bug #7538: Concurrent editing transaction strategy: Taxon turned into synonym by other user prior...
This could also be related to the same problem of concurrent editing:
"...mal wieder ein hübscher kleiner Fehler b...
Patrick Plitzner
10:48 AM bug #7543 (New): Name Editor does not auto-scroll during dragging
Hallo,
bei langen Synonymlisten scrolled die Liste nicht nach oben, wenn man ein Synonym dem Namen oder einem ande...
Patrick Plitzner
10:42 AM bug #7542 (Closed): Move synonym of homotypical group to taxon does not move the homotypical grou...
Hallo,
wir stoßen in neue Bug-Sphären vor.
Sophia hat versucht, im NameEditor die Reihenfolge der Synonyme zu k...
Patrick Plitzner
10:36 AM bug #7541 (Closed): Insufficient rights lead to missing focus in name editor
WGB:
wir haben angefangen die Iresines einzugeben. Auf Sophias Rechner traten dabei merkwürdige Fehler auf, und zw...
Patrick Plitzner
10:34 AM bug #7540 (New): RemoteAccessException when changing taxon to synonym in taxon navigator
"Hallo,
ich arbeite über Eduroam im Haus. Im Taxonomic Tree ändere ich den Status auf Synonym, dann langes Warten ...
Patrick Plitzner
10:31 AM bug #7539 (New): Synonym drag and drop sometimes does not refresh correctly
* one case is described in the parent ticket
* another case: "nach Synonym-Accepted Swap im NameEditor und anschließ...
Patrick Plitzner

07/09/2018

06:25 PM bug #7505 (Feedback): IllegalStateException: Multiple representations problem when adding Annotat...
@Andreas K.: Could you please test again if the multi rep exception still occurs? I re-enabled the parallel loading b... Patrick Plitzner
06:02 PM bug #7538 (New): Concurrent editing transaction strategy: Taxon turned into synonym by other user...
** Originally reported as:**
Liebes Edit-Team,
Manchmal erscheint dieser Fehler, wenn man nach Eingabe der Type...
Andreas Kohlbecker
03:36 PM bug #7537 (Rejected): Taxeditor can not connect to restarted, added cdm instance
After adding and starting, stopping and restarting the new cdn-server instance cdm_phycobank_production on edit test,... Andreas Kohlbecker
02:37 PM bug #7361 (Feedback): Consistent UI concept for create, new, add, remove, delete, edit buttons
Henning,
what do you think?
Andreas
Andreas Kohlbecker
02:36 PM bug #7361: Consistent UI concept for create, new, add, remove, delete, edit buttons
Another UI concept:
* use add row and remove icons like: ![](picture79-1.png), ![](picture79-2.png) from (https:/...
Andreas Kohlbecker
02:27 PM bug #7361: Consistent UI concept for create, new, add, remove, delete, edit buttons
adding a screenshot of the more consistren UI with the new "create-new" icon:
![](picture29-1.png)
Andreas Kohlbecker
 

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