Activity

From 07/03/2018 to 08/01/2018

08/01/2018

06:23 PM bug #7616 (Closed): reference page: show name types: The specimen table header is shown even when only name types are available. The name types should be displayed correc... Andreas Kohlbecker
05:53 PM bug #7615 (In Progress): Registrations not searchable in the PhycoBank portal: ID-Suche = Perfekt, alle 10 Fälle, in denen keine Anzeige erfolgte, funktionieren jetzt über die ID-Suche
Was im A... Wolf-Henning Kusber
05:43 PM bug #7615: Registrations not searchable in the PhycoBank portal: ready for review. Andreas Kohlbecker
05:43 PM bug #7615 (Resolved): Registrations not searchable in the PhycoBank portal: Applied in changeset commit:cdm-dataportal|bb177c82fe3bf3c699fd30817cd82167f14fe47f. Andreas Kohlbecker
05:35 PM bug #7615 (In Progress): Registrations not searchable in the PhycoBank portal: This happens because the dataportal sends an empty querystring for the scientific name and the webservice is not igno... Andreas Kohlbecker
05:14 PM bug #7615 (Closed): Registrations not searchable in the PhycoBank portal: 100002 Planothidium taeansa
100003 Planothidium naradoense
sind im Vaadin Editor über die Nummer suchbar
http://... Wolf-Henning Kusber
02:27 PM bug #7614: IndexOutOfBoundsException after deleting in bulkeditor: PS: Das scheint an dem Record selbst zu liegen. Katja Luther
02:24 PM bug #7614 (Closed): IndexOutOfBoundsException after deleting in bulkeditor: mail of WB:
Hallo,
beim Springen auf einen Listeneintrag nach durchgeführtem Delete eines anderen bekomme ich u.... Katja Luther
11:07 AM feature request #7613 (New): Vaadin: Fehlervermeidung bei Anlegen einer Referenz: Wunsch: Dass bei der Eingabe einer Referenz der häufigste Fall eingestellt ist.
D.h. Wird eine neue Referenz angel... Wolf-Henning Kusber

07/31/2018

06:13 PM feature request #7612 (Duplicate): CacheStrategy for MediaSpecimens: The DerivedUnitFacadeCacheStrategy has no support for `MediaSpecimen`s.
see #7608 for which the creation of a stri... Andreas Kohlbecker
06:11 PM feature request #7611: media types with media uris are clickable: Good idea, than the "[icon]" string makes really sense. Wolf-Henning Kusber
05:59 PM feature request #7611 (Feedback): media types with media uris are clickable: It would be much easier to implement if the "[icon]" text would be clickable instead.
What do you think about this... Andreas Kohlbecker
05:57 PM feature request #7611 (Closed): media types with media uris are clickable: Media types should be rendered in the following form depending on their type:
* **unpublished** (has collection ... Andreas Kohlbecker
06:00 PM bug #7608 (Resolved): TypeDesignationSetManager: string representations for media types are missing: completely solved, please review Andreas Kohlbecker
02:57 PM bug #7608 (In Progress): TypeDesignationSetManager: string representations for media types are missing: Andreas Kohlbecker
12:12 PM bug #7608 (Closed): TypeDesignationSetManager: string representations for media types are missing: Media types are currently represented as:
* Antigua and Barbuda. Holotype,
After the comma data is missing.
... Andreas Kohlbecker
05:11 PM feature request #7610 (Duplicate): Type search in PhycoBank Portal: List of „Type desgnation status“
Automatic Kommentar: unverständlich und unnötig
Epitype Kommentar: wichtig
Holo... Wolf-Henning Kusber
02:36 PM task #7596 (In Progress): PhycoBank Portal - Formatting: Andreas Kohlbecker
10:24 AM task #7596: PhycoBank Portal - Formatting: Nein, stört überhaupt nicht. Wolf-Henning Kusber
10:24 AM task #7596: PhycoBank Portal - Formatting: Wolf-Henning Kusber wrote:
> zu 7: Okay, wenn wir hier zwischen Vaadin User Interface und EDIT Portal unterscheiden ... Andreas Kohlbecker
10:11 AM task #7596: PhycoBank Portal - Formatting: zu 7: Okay, wenn wir hier zwischen Vaadin User Interface und EDIT Portal unterscheiden können. Im Vaadin UI stören mi... Wolf-Henning Kusber
01:47 PM bug #7544 (Resolved): Dragging a misapplication onto itself throws an exception in name editor: Katja Luther
01:46 PM bug #7544 (In Progress): Dragging a misapplication onto itself throws an exception in name editor: As a first implementation d&d for concept relations are not provided anymore.
For d&d to another name editor I crea... Katja Luther
01:44 PM bug #7544 (Resolved): Dragging a misapplication onto itself throws an exception in name editor: Applied in changeset commit:taxeditor|b7e704af02bbd5214b09e110244470ab1969ad2a. Katja Luther
11:27 AM bug #7544: Dragging a misapplication onto itself throws an exception in name editor: Katja Luther wrote:
> I removed the possiblity to drop at a misapplied name, but should it be possible to drag a mis... Andreas Müller
11:00 AM bug #7544 (In Progress): Dragging a misapplication onto itself throws an exception in name editor: I removed the possiblity to drop at a misapplied name, but should it be possible to drag a misapplied name and drop i... Katja Luther
01:46 PM feature request #7609 (New): drag & drop misapplied names from one name editor to another editor: copied from #7544:
To me it does not make sense to d&d a misapplication (or a ppSyn) within a name editor at all. We... Katja Luther
01:27 PM task #7420: Import for higher taxon graph for phycobank: Hi, here comes the spread sheet with the first data for the import: attachment:Algen_Syllabus_NormalImplied_Test.xls
... Andreas Kohlbecker
01:19 PM bug #7603: Changing a user group does not work as expected: the collection of groups in user was not correctly updated. Katja Luther
01:19 PM bug #7603 (Resolved): Changing a user group does not work as expected: Applied in changeset commit:taxeditor|78b5b7f70fef88f8a0bebba7aa3f5e7d85545514. Katja Luther
12:19 PM feature request #7429 (Resolved): Improve parsing and formatting for VerbatimTimePeriod: Applied in changeset commit:cdmlib|f8c23aa7bed4470dc98635a7880dee45456979e0. Andreas Müller
11:57 AM task #7607 (Closed): TypeDesignationSetManager: remove brackets from type representations: Andreas Kohlbecker
11:57 AM task #7607 (Resolved): TypeDesignationSetManager: remove brackets from type representations: Applied in changeset commit:cdmlib|223a5fd3159ad97f0742a2baf1e9c594bb454fd1. Andreas Kohlbecker
11:55 AM task #7607 (Closed): TypeDesignationSetManager: remove brackets from type representations: Type representations are currently enclosed in brackets:
"*Type: Tanzania, United Republic of, River Baka, Konde-L... Andreas Kohlbecker
11:56 AM bug #7593: Vaadin Layout Section Drop down: Wäre eine pragmatische Idee, ich müsste aber schauen, ob das praxisgerecht ist.
Mit Hinblick auf den Bulk-Editor,... Wolf-Henning Kusber
11:48 AM bug #7593: Vaadin Layout Section Drop down: das ist ein anderes problem und hat mit zu langen titeln in der Auswahlliste zu tun. Vielleicht sollten wir die maxim... Andreas Kohlbecker
11:42 AM bug #7593: Vaadin Layout Section Drop down: Der Fehler tritt noch bei "New Registration" im drop down von "Choose from existing publications" auf. Das Bild in m... Wolf-Henning Kusber
11:25 AM bug #7593: Vaadin Layout Section Drop down: bitte nochmal testen, jetzt ist der server up to date. Andreas Kohlbecker
11:45 AM bug #7505 (Closed): IllegalStateException: Multiple representations problem when adding Annotation to name in NameBulkEditor: I could no longer reproduce this issue. I am closing the ticket therefore. Andreas Kohlbecker
11:08 AM bug #7606 (Duplicate): compact display of CDM Point data: Point data like the exact location in gathering events should be displayed in a compact form including the
* sexa... Andreas Kohlbecker
10:44 AM bug #6563: Display altitude, distance to Ground and watersurface correct handling of freetext: Applied in changeset commit:cdm-dataportal|dbc2bfa999e320fefb994358f70c28a612ee2f10. Andreas Kohlbecker
09:33 AM bug #6563 (Resolved): Display altitude, distance to Ground and watersurface correct handling of freetext: Reopen for review as the freetext issue is not covered by #7578.
(Also I would prefer "Duplicate", not "Rejected"... Andreas Müller
10:31 AM bug #7542: Move synonym of homotypical group to taxon does not move the homotypical group correctly: Applied in changeset commit:taxeditor|f210d45341a085e74c27ab2eadb0dedb9c9c7ae2. Katja Luther

07/30/2018

09:56 PM bug #7555: TaxonServiceImpl.findTaxaAndNames() broken for cichoriae searching for "Lapsana communis": By the way, on production I got 21 results, on test only 20 (with the above tests) so data might have slightly changed. Andreas Müller
09:53 PM bug #7555 (Feedback): TaxonServiceImpl.findTaxaAndNames() broken for cichoriae searching for "Lapsana communis": I can reproduce this on production with the given URL, but I can NOT reproduce on
* test: http://test.e-taxonomy... Andreas Müller
07:14 PM task #7596: PhycoBank Portal - Formatting: Hallo Henning,
zu 7)
Diese Klammern kann ich probelmlos entfernen, sie werden derzeit nur bei phycobank spezifi... Andreas Kohlbecker
06:40 PM bug #7538: Concurrent editing transaction strategy: Taxon turned into synonym by other user prior to saving taxon which was modified in editor: Andreas Kohlbecker wrote:
> **NOTE:** A general problem or caveat of the data in the audit tables are lacking a time... Andreas Müller
06:12 PM bug #7538: Concurrent editing transaction strategy: Taxon turned into synonym by other user prior to saving taxon which was modified in editor: Patrick Plitzner wrote:
> This could also be related to the same problem of concurrent editing:
>
> "...mal wiede... Andreas Müller
06:39 PM bug #7605 (Closed): harmonize cdm_tagged_text_to_markup() with tagged text strategy in cdmlib: Andreas Kohlbecker
06:39 PM bug #7605 (Resolved): harmonize cdm_tagged_text_to_markup() with tagged text strategy in cdmlib: Applied in changeset commit:cdm-dataportal|0f129a6f839fddb958d1217ddaa1bd8319b06991. Andreas Kohlbecker
06:37 PM bug #7605 (Closed): harmonize cdm_tagged_text_to_markup() with tagged text strategy in cdmlib: see `eu.etaxonomy.cdm.strategy.cache.TaggedCacheHelper` for reference impelmentations Andreas Kohlbecker
06:36 PM feature request #7604 (New): Add user to AuditEvent: Especially for delete events it is difficult to find out **who** did run the event as created_by and updated_by is al... Andreas Müller
06:24 PM bug #7505: IllegalStateException: Multiple representations problem when adding Annotation to name in NameBulkEditor: What is the current state here? For the release we should revert to non parallel loading I think as there are a coupl... Andreas Müller
05:52 PM bug #7602 (Closed): reference page: proper formating of taxonnames in registration summries: Andreas Kohlbecker
05:51 PM bug #7602 (Resolved): reference page: proper formating of taxonnames in registration summries: Applied in changeset commit:cdm-dataportal|afe99f4d4011a82f6232d6066b78d535321969df. Andreas Kohlbecker
04:33 PM bug #7602 (Closed): reference page: proper formating of taxonnames in registration summries: Name in registration summaries are rendered completely in italics even rank labels are italic
retrieve tagged titles... Andreas Kohlbecker
05:17 PM bug #7541: Insufficient rights lead to missing focus in name editor: moved the second part of the description to a new ticket: #7603 Andreas Müller
05:12 PM bug #7541: Insufficient rights lead to missing focus in name editor: we should urgently address the rights issues in taxeditor. Otherwise soon all users that should have limited rights w... Andreas Müller
05:15 PM bug #7603 (Closed): Changing a user group does not work as expected: Copied from #7541:
Da gleich der nächste Bug: Wenn man im Person Editor bereits eine Gruppe zugeordnet hatte (in d... Andreas Müller
04:47 PM bug #7537: Taxeditor can not connect to restarted, added cdm instance: Not sure if this is really a taxeditor ticket. However, we should test (and fix it soon).
KL/PP can you please de... Andreas Müller
04:30 PM bug #7542: Move synonym of homotypical group to taxon does not move the homotypical group correctly: Please also remove the current taxon from the search dialog.
Patrick, can you however to the review already for th... Andreas Müller
04:05 PM bug #7601 (Closed): date published time period in reference page shows 'to' even if end date is missing: Andreas Kohlbecker
04:04 PM bug #7601 (Resolved): date published time period in reference page shows 'to' even if end date is missing: Applied in changeset commit:cdm-dataportal|c0223d83af6fcd3403f41662078ab48d929bab1f. Andreas Kohlbecker
01:24 PM bug #7601 (Closed): date published time period in reference page shows 'to' even if end date is missing: Andreas Kohlbecker
03:42 PM bug #7593: Vaadin Layout Section Drop down: Fehler tritt im Test-System noch auf. Wolf-Henning Kusber
03:36 PM feature request #7594: RegistrationWorkingsetEditor click on new serveral times: "new name" is meant.
After clicking on "new name" the system needs some time to open the next form/dialog. If the bl... Wolf-Henning Kusber
10:05 AM feature request #7594 (Feedback): RegistrationWorkingsetEditor click on new serveral times: can you please elaborate your request a bit more?
I don't quite understand which button you are referring to. The R... Andreas Kohlbecker
03:23 PM bug #7592: Search Button PhycoBank Test: http://test.e-taxonomy.eu/dataportal/preview/phycobank/
Firefox
Seite vollständig geladen Wolf-Henning Kusber
09:45 AM bug #7592 (Feedback): Search Button PhycoBank Test: Ich habe keine Probleme mit dem Search-button-icon.
Wurde die Seite denn vollständig geladen oder war sie noch ni... Andreas Kohlbecker
01:53 PM feature request #7429 (In Progress): Improve parsing and formatting for VerbatimTimePeriod: Andreas Müller
01:05 PM feature request #7600 (Closed): public setters for entity collections: In model classes the setters for entity collections are protected or do not exist at all.
Only add*() and remove*() ... Andreas Kohlbecker
01:00 PM feature request #7599 (In Progress): treeView for specimen data in dataportal: The current implementation provides all specimen with the whole tree with the first WS call, is it better to get firs... Katja Luther
12:37 PM feature request #7599 (Closed): treeView for specimen data in dataportal: The specimen tab/page section should show the tree structure of the specimen. To avoid performance problems the data ... Katja Luther
10:27 AM feature request #7595: PhycoBank Portal - Order Reference name: please review Andreas Kohlbecker
10:23 AM feature request #7595 (Resolved): PhycoBank Portal - Order Reference name: Applied in changeset commit:cdm-dataportal|84e766b2d336588cb073dab03de2f547ac3f16c6. Andreas Kohlbecker
09:28 AM feature request #7598 (New): Grouping of Restrictions implemented: Since solving #7590 it is possible to logically combine Restrictions by AND and OR. To allow for really flexible sear... Andreas Kohlbecker

07/27/2018

09:11 PM bug #7593 (Duplicate): Vaadin Layout Section Drop down: this is rather a duplicate of #7593 than a subtask Andreas Kohlbecker
11:21 AM bug #7593 (Duplicate): Vaadin Layout Section Drop down: Drop down in Layout insert section not stable.
S.h. das Drop down Menue springt, wird breiter und schiebt damit das... Wolf-Henning Kusber
09:10 PM bug #7591 (Closed): Vaadin Layout Reference new: Andreas Kohlbecker
09:09 PM bug #7591 (Resolved): Vaadin Layout Reference new: Applied in changeset commit:cdmlib|6f6eaedfdbbc6c717dd37d2403ac60d7d09d0fb9. Andreas Kohlbecker
10:51 AM bug #7591 (Closed): Vaadin Layout Reference new: Layout-Problem Reference new
![](Layout-vaadin-reference-new.PNG) Wolf-Henning Kusber
03:26 PM feature request #7597 (Closed): Aggregate and persist descriptions on taxon level: ~~The aggregation will be done on taxon level with already aggregated/computed descriptions.~~
as decided in the l... Patrick Plitzner
02:34 PM bug #7588 (Closed): ToOneRelatedEntityCombobox: edit button must not be enabled when value is null: Andreas Kohlbecker
02:19 PM task #7596: PhycoBank Portal - Formatting: Achtung, automatische Nummerierung stimmt nicht mit Screenshot überein. Wolf-Henning Kusber
02:11 PM task #7596 (Closed): PhycoBank Portal - Formatting: See screen shot below or (http://test.e-taxonomy.eu/dataportal/preview/phycobank/cdm_dataportal/reference/b2741740-7d... Wolf-Henning Kusber
02:12 PM feature request #7572 (Resolved): SpecimenTypeDesignationEditor: Collection combobox shows collection.code and collection.institution: please review. Andreas Kohlbecker
01:53 PM feature request #7590 (Resolved): findByTitleWithRestrictions allows combining Restrictions by OR: Andreas Kohlbecker
08:40 AM feature request #7590 (In Progress): findByTitleWithRestrictions allows combining Restrictions by OR: Andreas Kohlbecker
01:40 PM feature request #7595 (Closed): PhycoBank Portal - Order Reference name: Change 1)in Reference 2) Name string to
1) Name string (2) in Reference
![](PhycoBank_Portal_Ref_Name.PNG) Wolf-Henning Kusber
11:47 AM feature request #7594 (Closed): RegistrationWorkingsetEditor click on new serveral times: Vaadin Registration Workingset Editor
Click on "new name" starts a new name popup editor. The blue progressbar on ... Wolf-Henning Kusber
10:56 AM bug #7592 (Closed): Search Button PhycoBank Test: TestPortal PhycoBank, Firefox 61.0.1 (64-Bit)
Bug: icon for search not visible.
![](Bug-Portal-PhycoBank.PNG) Wolf-Henning Kusber

07/26/2018

02:37 PM feature request #7572 (In Progress): SpecimenTypeDesignationEditor: Collection combobox shows collection.code and collection.institution: Andreas Kohlbecker
02:36 PM feature request #7572: SpecimenTypeDesignationEditor: Collection combobox shows collection.code and collection.institution: The CdmFilterablePagingProvider is not yet including the institution titlecache in the search.
For this to impleme... Andreas Kohlbecker
02:35 PM feature request #7590 (Closed): findByTitleWithRestrictions allows combining Restrictions by OR: see #7572#note-2 for details Andreas Kohlbecker
02:13 PM bug #7588 (Resolved): ToOneRelatedEntityCombobox: edit button must not be enabled when value is null: Applied in changeset commit:cdm-vaadin|2965ff8869dba39344151eee9da003154865dc48. Andreas Kohlbecker
01:13 PM bug #7588 (Closed): ToOneRelatedEntityCombobox: edit button must not be enabled when value is null: The edit button of the ToOneRelatedEntityCombobox is enabled even if the value is null. Andreas Kohlbecker
01:36 PM feature request #7589: Performance, UX and stability patches for CharacterMatrix: changes:
commit:taxeditor|b4f09ad3c826e81124053685a7d946a3c9b10778
commit:taxeditor|b5a4b38f8c40957ef909259004fa5... Patrick Plitzner
01:34 PM feature request #7589 (Closed): Performance, UX and stability patches for CharacterMatrix: This ticket is for collecting all the changes done to improve the stability and performance and the user experience o... Patrick Plitzner
11:48 AM bug #7366: TeamOrPersonField readonly if users lacks edit permissions: setting the datasource to readonly as it was implemented for this issue was causing problems with the ToOneRelatedEnt... Andreas Kohlbecker
11:47 AM bug #7586: com.vaadin.data.Property$ReadOnlyException on opening TypeSpecimenWorkingsetEditor: This should be solved now! Andreas Kohlbecker
11:41 AM bug #7586: com.vaadin.data.Property$ReadOnlyException on opening TypeSpecimenWorkingsetEditor: for solving #7366 the datasource is set in `TeamOrPersonField.adaptToUserPermissions()` to readonly if the the lacks ... Andreas Kohlbecker
08:07 AM bug #7586 (Resolved): com.vaadin.data.Property$ReadOnlyException on opening TypeSpecimenWorkingsetEditor: Applied in changeset commit:cdm-vaadin|bbdd609fd9f9a504f0225c98ce01c8f4b19931f9. Andreas Kohlbecker
08:05 AM bug #7586 (Closed): com.vaadin.data.Property$ReadOnlyException on opening TypeSpecimenWorkingsetEditor: This ReadOnlyException is thrown when a user with insufficient privileges for editing the collector related to a Fiel... Andreas Kohlbecker
08:21 AM task #7587 (New): ToOneRelatedEntityReloader to listen and operate on PropertyDatasources directly?: This idea came up while working on #7586.
Currently the `ToOneRelatedEntityReloader` is attached as `ValueChangeLi... Andreas Kohlbecker

07/25/2018

07:18 PM task #7573 (Closed): CollectionPopEditor superCollection only visible for advanced users: Andreas Kohlbecker
04:48 PM bug #7585 (Closed): RegistrationCuratorRoleProbe does not only check the ROLE_CURATION: the check done in this class seems wrong:
~~~java
return a.equals(RolesAndPermissions.ROLE_CURATION)
... Andreas Kohlbecker
04:36 PM feature request #7572 (Resolved): SpecimenTypeDesignationEditor: Collection combobox shows collection.code and collection.institution: Applied in changeset commit:cdm-vaadin|d7edf1e089bd6f3a63904f86bf6160aaa4d1839a. Andreas Kohlbecker
04:21 PM feature request #7570: Institution editor implemented: implemented with basic set of fields covering
* name
* code
* part of other institution
according to #7571 : ... Andreas Kohlbecker
04:19 PM feature request #7570 (Resolved): Institution editor implemented: Applied in changeset commit:cdm-vaadin|90e5b45a71c8b48e029fbbbc5d0393022f0f041e. Andreas Kohlbecker
04:19 PM feature request #7571 (Resolved): Collection editor has field to select and edit the institution: Applied in changeset commit:cdm-vaadin|1faff10b568bf292fda37d44a8dd1502de16efcb. Andreas Kohlbecker
11:00 AM bug #7543: Name Editor does not auto-scroll during dragging: this is not as easy as it seems, we need to write our own listener which listen on the mouse position and scrolls, wh... Katja Luther
08:26 AM feature request #7584 (New): Display unscary notification instead of "delete operation was abborded by the system" when related objects exist: The error box which is currently shown after the attempt to delete a cdm entity which is still used by other entities... Andreas Kohlbecker
07:58 AM bug #7583 (Resolved): NPE on logout in registration list view: Applied in changeset commit:cdm-vaadin|10d75c612b4f8c6a2fed7ebe8f402d18917af536. Andreas Kohlbecker
07:57 AM bug #7583 (Closed): NPE on logout in registration list view: …und beim Logout:
~~~~
com.vaadin.server.ServerRpcManager$RpcInvocationException: Unable to invoke method click... Andreas Kohlbecker

07/24/2018

06:17 PM feature request #7551 (Closed): TypeDesignationSetManager provides summary as TaggedText: Andreas Kohlbecker
06:15 PM feature request #7551 (Duplicate): TypeDesignationSetManager provides summary as TaggedText: duplicate of #7348 Andreas Kohlbecker
06:13 PM bug #6695 (Closed): module cdmlib/services should not be an osgi bundle: Andreas Kohlbecker
06:13 PM bug #6695: module cdmlib/services should not be an osgi bundle: this has been solved by adding the following pluginExecution configuration to cdmlib/lifecycle-mapping-metadata.xml w... Andreas Kohlbecker
06:06 PM bug #7358 (Closed): Show warning when browser history back is used while popup editors are open: Andreas Kohlbecker
06:05 PM bug #7358 (Resolved): Show warning when browser history back is used while popup editors are open: Applied in changeset commit:cdm-vaadin|26e068777f74a5d5f07ac19a4ce727eecc16093d. Andreas Kohlbecker
04:11 PM bug #7582 (Duplicate): prevent from creating empty registrations: The RegistrationWorkinsetEditor leaves empty registrations in the database when a new 'typification only registration... Andreas Kohlbecker
03:59 PM bug #7542: Move synonym of homotypical group to taxon does not move the homotypical group correctly: please review Katja Luther
03:58 PM bug #7542 (Resolved): Move synonym of homotypical group to taxon does not move the homotypical group correctly: Applied in changeset commit:cdmlib|eb95398b963a25d0d4d48bff12767dd4cd984de4. Katja Luther
03:37 PM bug #6379 (Worksforme): specimens of lectotypes not shown in portal: it seems as this has been fixed meanwhile. Andreas Kohlbecker
03:20 PM feature request #7462 (Feedback): references in type footnotes are clickable links: is this still needed with the new registration page? Andreas Kohlbecker
03:15 PM feature request #7581 (New): TaxonNamePopEditor: support for editing of all name relationships: Currently the TaxonNamePopEditor allows editing of basionyms, and of validations as well as replaced synonyms.
The... Andreas Kohlbecker
02:53 PM feature request #7580 (In Progress): User wishes: CharacterMatrix: * enter values in multiple cells simultanously
* copy&paste cell value (maybe via dragging) Patrick Plitzner
02:49 PM bug #7579 (New): Set up pipelines in Jenkins to replace the build pipelines: Our jenkins setup are using the [build-pipeline-plugin](https://plugins.jenkins.io/build-pipeline-plugin).
Since J... Andreas Kohlbecker
02:41 PM bug #7578: preseve null values in all mesurements during serialization of webservice responses: review by checking the example record here: http://test.e-taxonomy.eu/dataportal/preview/cichorieae/cdm_dataportal/ta... Andreas Kohlbecker
02:38 PM bug #7578 (Resolved): preseve null values in all mesurements during serialization of webservice responses: Applied in changeset commit:cdmlib|d9f51acb041832197601f3343f4d3f6fd777b888. Andreas Kohlbecker

07/23/2018

01:10 PM bug #6563 (Rejected): Display altitude, distance to Ground and watersurface correct handling of freetext: Rejecting this issue as only the symptom is described here.
The actual cause is false serialization of Double value... Andreas Kohlbecker
01:08 PM bug #7578 (Closed): preseve null values in all mesurements during serialization of webservice responses: as reported in #6563 the double values which are `null` are serialized as `0.0` by json-lib this is plain wrong for a... Andreas Kohlbecker
12:20 PM bug #7577: Set Publish Flag for Subtree Dialog - Further Problems with Progressmonitor: In the end the cdm-remote instance crashed with a `java.lang.OutOfMemoryError: Java heap space` even if it has been s... Andreas Kohlbecker
12:18 PM bug #7577: Set Publish Flag for Subtree Dialog - Further Problems with Progressmonitor: A anylysis of the staktrace kane with jstack revels that it is `hibernate.search` taking all the CPU in order to inde... Andreas Kohlbecker
11:52 AM bug #7577: Set Publish Flag for Subtree Dialog - Further Problems with Progressmonitor: I tested again.
This time I set the publish flag to true, all taxa an synonmys intially are publish = false:
... Andreas Kohlbecker
10:41 AM bug #7577 (New): Set Publish Flag for Subtree Dialog - Further Problems with Progressmonitor: Summarizing the insights from this examination I come to the conclusion that we need to work on the following:
1... Andreas Kohlbecker
10:41 AM bug #7576 (Feedback): Set Publish Flag for Subtree Dialog - Problems with Progressmonitor: Andreas Kohlbecker
10:34 AM bug #7576: Set Publish Flag for Subtree Dialog - Problems with Progressmonitor: Hallo Katja,
ich weiß, dass du an diesem Problem gearbeitet hast, konnte aber kein Ticket dazu finden. Daher habe ... Andreas Kohlbecker
10:30 AM bug #7576 (Closed): Set Publish Flag for Subtree Dialog - Problems with Progressmonitor: Setzen des Publish-Flags auf der kompletten Cichorienklassifikation:

Die Prozentanzeige bleibt bei 54.95% stehen ... Andreas Kohlbecker

07/12/2018

10:26 PM feature request #7348: RegistrationDTO webservices implemented: **TODO:**
remove the following fields from DTO Serialization:
* `typeDesignations`
* `orderdTypeDesignationWo... Andreas Kohlbecker
10:23 PM task #7527: CdmEntityDaoBase.*ByParam() public and also available in the service layer: please review.
Andreas Kohlbecker
10:19 PM task #7550 (Resolved): Move UserHelper from cdm-vaadin into cdmlib: close if the changes are not causing any obvious errors Andreas Kohlbecker
02:15 PM task #7550 (Closed): Move UserHelper from cdm-vaadin into cdmlib: The `AbstractController` already duplicates some of the methods offered by the UserHelper. The UserHelper for now is... Andreas Kohlbecker
05:44 PM task #7553 (Closed): move TypeDesignationSetManagerIT to cdmlib: the `TypeDesignationSetManager` has been moved (#7348, commit:6e858cb7) to cdmlib but the according test still reside... Andreas Kohlbecker
05:31 PM bug #7552 (Closed): use TaggedText.entityReference to add style and uuid to html tags: TaggedText as provided by the cdmlib not provides TypedEntityReference information in the property TaggedText.entityR... Andreas Kohlbecker
05:06 PM feature request #7551 (Closed): TypeDesignationSetManager provides summary as TaggedText: TypeDesignationSetManager can provide a summary of the ordered type designations. For the dataportal the summary shou... Andreas Kohlbecker
04:58 PM feature request #6967 (Resolved): RegistrationController identifier endpoints implemented: Applied in changeset commit:cdmlib|f9bb9711ec4265c5862d4616477c24fc9a16fa2f. Andreas Kohlbecker
04:56 PM feature request #6967: RegistrationController identifier endpoints implemented: the endpoint `/registration/{localID}` is not needed, is it? Andreas Kohlbecker
02:07 PM task #7546: Better guidance for users when creating registrations for exising names: Dieser 2. Satz ist vielleicht wirklich überflüssig, er beleuchtet lediglich die Hintergünde zu Satz 1.
Ok, streich... Andreas Kohlbecker
01:48 PM task #7546: Better guidance for users when creating registrations for exising names: Brauchen wir alle 3 Sätze. Der 2. ist schwer verständlich. Bin alles mit unserer native Speakerin durchgegangen. Ihr ... Wolf-Henning Kusber
12:39 PM feature request #7549 (Closed): Show tooltip for data aggregation in character matrix: When hovering over any cell of the summary row a tooltip should show up giving a brief statistical summary of the cur... Patrick Plitzner
10:16 AM feature request #7548 (In Progress): RegistrationWorkingSetEditor loads slowly with big working sets: The RegistrationWorkingSetEditor not only loads slowly when initially opened also when saving a popup editor the work... Andreas Kohlbecker

07/11/2018

03:47 PM task #7527 (Resolved): CdmEntityDaoBase.*ByParam() public and also available in the service layer: Applied in changeset commit:cdmlib|51ee66dc3a639019afbb58811e32c98e0f186b12. Andreas Kohlbecker
03:43 PM task #7527: CdmEntityDaoBase.*ByParam() public and also available in the service layer: ... also `public Pager<T> page(Class<? extends T> clazz, String param, String queryString, MatchMode matchmode, List... Andreas Kohlbecker
03:04 PM task #7527 (In Progress): CdmEntityDaoBase.*ByParam() public and also available in the service layer: I implemented `public Pager<T> pageByRestrictions(Class<? extends T> clazz, String param, String queryString, MatchMo... Andreas Kohlbecker
01:31 PM bug #7547 (Closed): ToManyRelatedEntitiesComboboxSelect buttons enabled even if the containig editor is readOnly: fixed! Andreas Kohlbecker
01:31 PM bug #7547 (Resolved): ToManyRelatedEntitiesComboboxSelect buttons enabled even if the containig editor is readOnly: Applied in changeset commit:cdm-vaadin|8a1add900f82f756d5df22205144a50b0deca0cb. Andreas Kohlbecker
01:13 PM bug #7547 (Closed): ToManyRelatedEntitiesComboboxSelect buttons enabled even if the containig editor is readOnly: see this screenshot for example:
![](picture507-1.png) Andreas Kohlbecker
01:07 PM task #7546: Better guidance for users when creating registrations for exising names: done and ready for review.
When reviewing please have extra critical eyeball on the text close to the bottom of t... Andreas Kohlbecker
01:04 PM task #7546 (Resolved): Better guidance for users when creating registrations for exising names: Applied in changeset commit:cdm-vaadin|cf9c36f82e17e2f5fb613ef6132994544c523a81. Andreas Kohlbecker
11:56 AM task #7546 (In Progress): Better guidance for users when creating registrations for exising names: A dialog is not the best solution, adding the required ui elements to the footer section of the workingset editor is ... Andreas Kohlbecker

07/10/2018

05:32 PM bug #7545 (Closed): IllegalStateException: Multiple representations ... when saving first typeDesignation for name less Registration: perfekt! Wolf-Henning Kusber
04:39 PM bug #7545 (Resolved): IllegalStateException: Multiple representations ... when saving first typeDesignation for name less Registration: Applied in changeset commit:cdm-vaadin|af8ec722535f95fcccdc5f4fd4562238987d300a. Andreas Kohlbecker
03:56 PM bug #7545: IllegalStateException: Multiple representations ... when saving first typeDesignation for name less Registration: I reproduced this issue.
Duplicate cdm entities only exist after pressing the save button for the new typedesigna... Andreas Kohlbecker
02:58 PM bug #7545: IllegalStateException: Multiple representations ... when saving first typeDesignation for name less Registration: The aftereffects disappeared after restarting the cdm-remote instance. So these secondary problems where most probabl... Andreas Kohlbecker
02:30 PM bug #7545: IllegalStateException: Multiple representations ... when saving first typeDesignation for name less Registration: Hallo Henning,
durch den ersten Fehler wurde eine Registrierung erzeugt, die keine TypeDesignation hatte. Das sie ... Andreas Kohlbecker
02:30 PM bug #7545: IllegalStateException: Multiple representations ... when saving first typeDesignation for name less Registration: Und wenn man nach diesem Identifier sucht gibt es auch eine Fehlermeldung [#!list/inProgress]:
~~~
java.lang.Null... Andreas Kohlbecker
02:29 PM bug #7545: IllegalStateException: Multiple representations ... when saving first typeDesignation for name less Registration: Hallo,

nach dem Fehler, konnte ich keine neuen existierenden Namen auswählen (alter Fehler)
nach aus und einlogg... Andreas Kohlbecker
02:29 PM bug #7545 (Closed): IllegalStateException: Multiple representations ... when saving first typeDesignation for name less Registration: Henning reported this error which happened while creating a registration for the existing name *Rhopalodia hirudinifo... Andreas Kohlbecker
03:46 PM bug #7331: AdvancedBeanInitializer fails to initialize properties of preinitialized beans in the graph in very special situations: Adding exported breakpoints from my eclipse which might help debugging this issue. Andreas Kohlbecker
03:37 PM bug #7523 (Rejected): RegistrationWorkingSetEditor: existing name combobox must only offer names which are not yet registered in phycobank: rejected in favor of #7546 Andreas Kohlbecker
12:04 PM bug #7523: RegistrationWorkingSetEditor: existing name combobox must only offer names which are not yet registered in phycobank: The above change has been applied after receiving the below email:
Hallo,

um vorgesehene Registrierungen (Ty... Andreas Kohlbecker
03:35 PM task #7546 (Closed): Better guidance for users when creating registrations for exising names: The strategy followed in #7523 effectively blocks creating registrations for existing names, which makes not much sen... Andreas Kohlbecker
12:07 PM feature request #7348 (In Progress): RegistrationDTO webservices implemented: Andreas Kohlbecker
11:15 AM bug #7544 (Closed): Dragging a misapplication onto itself throws an exception in name editor: When dragging and dropping a misapplication onto itself in the taxon name editor the following exception is thrown an... Patrick Plitzner
10:57 AM bug #7538: Concurrent editing transaction strategy: Taxon turned into synonym by other user prior to saving taxon which was modified in editor: This could also be related to the same problem of concurrent editing:
"...mal wieder ein hübscher kleiner Fehler b... Patrick Plitzner
10:48 AM bug #7543 (New): Name Editor does not auto-scroll during dragging: Hallo,
bei langen Synonymlisten scrolled die Liste nicht nach oben, wenn man ein Synonym dem Namen oder einem ande... Patrick Plitzner
10:42 AM bug #7542 (Closed): Move synonym of homotypical group to taxon does not move the homotypical group correctly: Hallo,
wir stoßen in neue Bug-Sphären vor.
Sophia hat versucht, im NameEditor die Reihenfolge der Synonyme zu k... Patrick Plitzner
10:36 AM bug #7541 (Closed): Insufficient rights lead to missing focus in name editor: WGB:
wir haben angefangen die Iresines einzugeben. Auf Sophias Rechner traten dabei merkwürdige Fehler auf, und zw... Patrick Plitzner
10:34 AM bug #7540 (New): RemoteAccessException when changing taxon to synonym in taxon navigator: "Hallo,
ich arbeite über Eduroam im Haus. Im Taxonomic Tree ändere ich den Status auf Synonym, dann langes Warten ... Patrick Plitzner
10:31 AM bug #7539 (New): Synonym drag and drop sometimes does not refresh correctly: * one case is described in the parent ticket
* another case: "nach Synonym-Accepted Swap im NameEditor und anschließ... Patrick Plitzner

07/09/2018

06:25 PM bug #7505 (Feedback): IllegalStateException: Multiple representations problem when adding Annotation to name in NameBulkEditor: @Andreas K.: Could you please test again if the multi rep exception still occurs? I re-enabled the parallel loading b... Patrick Plitzner
06:02 PM bug #7538 (New): Concurrent editing transaction strategy: Taxon turned into synonym by other user prior to saving taxon which was modified in editor: ** Originally reported as:**
Liebes Edit-Team,
Manchmal erscheint dieser Fehler, wenn man nach Eingabe der Type... Andreas Kohlbecker
03:36 PM bug #7537 (Rejected): Taxeditor can not connect to restarted, added cdm instance: After adding and starting, stopping and restarting the new cdn-server instance cdm_phycobank_production on edit test,... Andreas Kohlbecker
02:37 PM bug #7361 (Feedback): Consistent UI concept for create, new, add, remove, delete, edit buttons: Henning,
what do you think?
Andreas Andreas Kohlbecker
02:36 PM bug #7361: Consistent UI concept for create, new, add, remove, delete, edit buttons: Another UI concept:
* use add row and remove icons like: ![](picture79-1.png), ![](picture79-2.png) from (https:/... Andreas Kohlbecker
02:27 PM bug #7361: Consistent UI concept for create, new, add, remove, delete, edit buttons: adding a screenshot of the more consistren UI with the new "create-new" icon:
![](picture29-1.png) Andreas Kohlbecker

07/06/2018

03:17 PM bug #7531 (Resolved): PermissionDeniedException on flushing registration with modified status even if the user has the required authority: Fixed by implementing solution 1)
@Andreas Müller: can you please review the changes in cdmlib? Andreas Kohlbecker
12:03 PM feature request #7518 (Resolved): remaining issues for usage of NatTable for bulkeditor: Patrick Plitzner
11:59 AM bug #7535: TeamOrPersonField: remove OK button an select the chosen enitity immediately: implemented and ready for review Andreas Kohlbecker
08:27 AM bug #7535 (Resolved): TeamOrPersonField: remove OK button an select the chosen enitity immediately: Applied in changeset commit:cdm-vaadin|87bbccd430886b5a2b9c744e0dc018e7d6235920. Andreas Kohlbecker
08:02 AM bug #7535 (Closed): TeamOrPersonField: remove OK button an select the chosen enitity immediately: Henning:
Bei Auswahl eines Authors muss OK gedrückt werden, sonst wird eine leere Sektion gespeichert.
Vorschla... Andreas Kohlbecker

07/05/2018

09:40 PM bug #7534 (Closed): registration list filters preserved in session: Andreas Kohlbecker
09:38 PM bug #7534 (Resolved): registration list filters preserved in session: Applied in changeset commit:cdm-vaadin|1e6c448a39b44580362af902142a2af98cfadf2c. Andreas Kohlbecker
06:30 PM bug #7534: registration list filters preserved in session: storing this data in the session is faster to implement Andreas Kohlbecker
06:01 PM bug #7534 (Closed): registration list filters preserved in session: symptoms caused by this issue:
1. registration list pager loses filters when navigating to other page - critical
... Andreas Kohlbecker
06:27 PM feature request #7518 (In Progress): remaining issues for usage of NatTable for bulkeditor: Patrick Plitzner
05:59 PM feature request #7533: add typeStatus filter to registration list: Ready for review Andreas Kohlbecker
05:57 PM feature request #7533: add typeStatus filter to registration list: there are a couple of old data sets with typeStatus = null, therefore I am adding the null as filter option Andreas Kohlbecker
05:22 PM feature request #7533 (Resolved): add typeStatus filter to registration list: Applied in changeset commit:cdm-vaadin|56432bdd018d92bebb99ecfdaeca8721d7927416. Andreas Kohlbecker
03:26 PM feature request #7533 (Closed): add typeStatus filter to registration list: The filter options in the registration list view should offer to filter by TypeDesignation.status:
The filter will... Andreas Kohlbecker
02:14 PM bug #7531: PermissionDeniedException on flushing registration with modified status even if the user has the required authority: Solution 1) still looks like the best option we have. Andreas Kohlbecker
11:53 AM bug #7531 (In Progress): PermissionDeniedException on flushing registration with modified status even if the user has the required authority: Andreas Kohlbecker
10:27 AM bug #7505: IllegalStateException: Multiple representations problem when adding Annotation to name in NameBulkEditor: Andreas Müller wrote:
> shouldn't we close this as a kind of duplicate for #6321? With reverting #6321 this problem ... Patrick Plitzner
07:59 AM bug #7222: Phycobank UI improve labels: Andreas Kohlbecker wrote:
> [Answer by Walter]
>
> Also nur Namen ab der Rangstufe Genus sind „uninomials“, finde... Andreas Kohlbecker
07:55 AM bug #7222: Phycobank UI improve labels: Hallo,

dann schließe ich mich gerne der allgemeinen Definition an. Habe es noch mal nachgelesen und Walter hat Re... Andreas Kohlbecker
07:55 AM bug #7222: Phycobank UI improve labels: [Answer by Walter]
Hallo,
merkwürdig, da sind Henning und ich (und Nick Turland) nicht der gleichen Meinung:

... Andreas Kohlbecker

07/04/2018

05:28 PM bug #7524 (Closed): TaxonNameEditor blocks entering new names for genera: Andreas Kohlbecker
05:25 PM bug #7524 (Worksforme): TaxonNameEditor blocks entering new names for genera: works :) Wolf-Henning Kusber
04:49 PM bug #7524 (In Progress): TaxonNameEditor blocks entering new names for genera: Solved and ready for the review. Andreas Kohlbecker
04:42 PM bug #7524 (Resolved): TaxonNameEditor blocks entering new names for genera: Applied in changeset commit:cdm-vaadin|9361ce643c9b449ce33d77973ffe7d6ff9fc80b5. Andreas Kohlbecker
03:29 PM bug #7524 (In Progress): TaxonNameEditor blocks entering new names for genera: Andreas Kohlbecker
04:53 PM feature request #4227: handle generated resources in eclipse workspace: Patrick and I decided that you will be the next tester. Andreas Kohlbecker
04:50 PM feature request #4227: handle generated resources in eclipse workspace: I tried the A+ strategy and it worked fine.
1. git checkout generated-resources
1. run `setup-project.sh`
1. Ins... Patrick Plitzner
04:48 PM feature request #4227: handle generated resources in eclipse workspace: [Patrick has tested strategy A+, these are his results:]
* had to apply the `/cdmlib-parent/lifecycle-mapping-meta... Andreas Kohlbecker
03:24 PM bug #7385 (Closed): TaxonNameEditor adapt field visibility to rank: suggestion added to #7222#note-4 Andreas Kohlbecker
01:39 PM bug #7385: TaxonNameEditor adapt field visibility to rank: All is fine, except of one label:
Proposal: change "Infrageneric epithet" to "Infrageneric uninominal"
Reason: ... Wolf-Henning Kusber
03:22 PM bug #7222 (Feedback): Phycobank UI improve labels: Henning suggested the following for the Name Editor:
* Proposal: change "Infrageneric epithet" to "Infrageneric un... Andreas Kohlbecker
03:18 PM bug #7528: Allow changing the Registration status in the RegistrationWorkingsetEditor: This is now complete even if it is not yet possible for submitter to change the status due to the bug #7531. But this... Andreas Kohlbecker
03:06 PM bug #7528 (Resolved): Allow changing the Registration status in the RegistrationWorkingsetEditor: Applied in changeset commit:cdm-vaadin|725d1ff22626d3b584606a29756c4be7c750aca1. Andreas Kohlbecker
03:15 PM bug #7531 (Closed): PermissionDeniedException on flushing registration with modified status even if the user has the required authority: User with the Grantedauthority `REGISTRATION(PREPARATION).[UPDATE]{06649467-7c4f-4b8b-98e6-395e4d3af240}` changes th... Andreas Kohlbecker
01:58 PM feature request #7131 (Closed): Registrations ListView has pager to browse the whole result set: Perfekt! Wolf-Henning Kusber

07/03/2018

06:21 PM bug #7528 (In Progress): Allow changing the Registration status in the RegistrationWorkingsetEditor: Andreas Kohlbecker
06:00 PM feature request #7131: Registrations ListView has pager to browse the whole result set: Hi Henning,
the pager is ready, you can review this feature now.
Andreas
Andreas Kohlbecker
05:59 PM feature request #7131 (Resolved): Registrations ListView has pager to browse the whole result set: Applied in changeset commit:cdm-vaadin|1a4c1ca754f6e7d8ce2fb04adab9f14c226b24fc. Andreas Kohlbecker
12:04 PM feature request #4227: handle generated resources in eclipse workspace: Ich habe einen branch **generated-resources** committed in dem alle .classpath and .project files gelöscht sind: com... Andreas Kohlbecker
09:25 AM feature request #4227: handle generated resources in eclipse workspace: auch der Wechsel auf einen anderen Branch klappt mit diesem Setup problemlos:
1. start im develop branch
1. `gi... Andreas Kohlbecker
09:13 AM feature request #4227: handle generated resources in eclipse workspace: Ich habe heute morgen noch eine radikalere Strategie getestet - Stratregie **A+**:
1. Projekt in Eclipse gelöscht,... Andreas Kohlbecker
11:22 AM task #7364 (Closed): TaxonNameEditor supports editing of a validated name: Wolf-Henning Kusber
11:16 AM bug #7387 (Closed): TaxonNamePopEditor: ConstraintViolationException on saving a basionym: Wolf-Henning Kusber
11:16 AM bug #7387 (Worksforme): TaxonNamePopEditor: ConstraintViolationException on saving a basionym: Wolf-Henning Kusber
10:26 AM bug #7179 (Closed): Phycobank: set protectedTitleCaches = 1 where Person contains no data: finally fixed! All changes applied to the phycobank production database Andreas Kohlbecker
10:24 AM bug #7179: Phycobank: set protectedTitleCaches = 1 where Person contains no data: fixing protectedNomenclaturalTitleCache
~~~sql
UPDATE AgentBase a SET protectedNomenclaturalTitleCache = 1
... Andreas Kohlbecker
10:22 AM bug #7179: Phycobank: set protectedTitleCaches = 1 where Person contains no data: fixing
~~~sql
UPDATE AgentBase a SET protectedCollectorTitleCache = 1
WHERE DTYPE = 'Person' AND a.givenNa... Andreas Kohlbecker
10:10 AM bug #7179 (In Progress): Phycobank: set protectedTitleCaches = 1 where Person contains no data: This only has been fixed for protectedTitleCache. The flags protectedCollectorTitleCache and protectedNomenclaturalTi... Andreas Kohlbecker
09:44 AM bug #7529 (Closed): Wrong UUID after creating a GrantedAuthority for a Role like ROLE_PUBLISH: The ROLE_PUBLISH was not yet in the database and thus was created using the Taxeditor GrantedAuthority Create Dialog.... Andreas Kohlbecker

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