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From 06/25/2018 to 07/24/2018

07/24/2018

06:17 PM feature request #7551 (Closed): TypeDesignationSetManager provides summary as TaggedText
Andreas Kohlbecker
06:15 PM feature request #7551 (Duplicate): TypeDesignationSetManager provides summary as TaggedText
duplicate of #7348 Andreas Kohlbecker
06:13 PM bug #6695 (Closed): module cdmlib/services should not be an osgi bundle
Andreas Kohlbecker
06:13 PM bug #6695: module cdmlib/services should not be an osgi bundle
this has been solved by adding the following pluginExecution configuration to cdmlib/lifecycle-mapping-metadata.xml w... Andreas Kohlbecker
06:06 PM bug #7358 (Closed): Show warning when browser history back is used while popup editors are open
Andreas Kohlbecker
06:05 PM bug #7358 (Resolved): Show warning when browser history back is used while popup editors are open
Applied in changeset commit:cdm-vaadin|26e068777f74a5d5f07ac19a4ce727eecc16093d. Andreas Kohlbecker
04:11 PM bug #7582 (Duplicate): prevent from creating empty registrations
The RegistrationWorkinsetEditor leaves empty registrations in the database when a new 'typification only registration... Andreas Kohlbecker
03:59 PM bug #7542: Move synonym of homotypical group to taxon does not move the homotypical group correctly
please review Katja Luther
03:58 PM bug #7542 (Resolved): Move synonym of homotypical group to taxon does not move the homotypical gr...
Applied in changeset commit:cdmlib|eb95398b963a25d0d4d48bff12767dd4cd984de4. Katja Luther
03:37 PM bug #6379 (Worksforme): specimens of lectotypes not shown in portal
it seems as this has been fixed meanwhile. Andreas Kohlbecker
03:20 PM feature request #7462 (Feedback): references in type footnotes are clickable links
is this still needed with the new registration page? Andreas Kohlbecker
03:15 PM feature request #7581 (New): TaxonNamePopEditor: support for editing of all name relationships
Currently the TaxonNamePopEditor allows editing of basionyms, and of validations as well as replaced synonyms.
The...
Andreas Kohlbecker
02:53 PM feature request #7580 (New): User wishes: CharacterMatrix
* enter values in multiple cells simultanously
* copy&paste cell value (maybe via dragging)
Patrick Plitzner
02:49 PM bug #7579 (New): Set up pipelines in Jenkins to relace the build pipelines
Our jenkins setup are using the [build-pipeline-plugin](https://plugins.jenkins.io/build-pipeline-plugin).
Since J...
Andreas Kohlbecker
02:41 PM bug #7578: preseve null values in all mesurements during serialization of webservice responses
review by checking the example record here: http://test.e-taxonomy.eu/dataportal/preview/cichorieae/cdm_dataportal/ta... Andreas Kohlbecker
02:38 PM bug #7578 (Resolved): preseve null values in all mesurements during serialization of webservice r...
Applied in changeset commit:cdmlib|d9f51acb041832197601f3343f4d3f6fd777b888. Andreas Kohlbecker

07/23/2018

01:10 PM bug #6563 (Rejected): Display altitude, distance to Ground and watersurface correct handling of ...
Rejecting this issue as only the symptom is described here.
The actual cause is false serialization of Double value...
Andreas Kohlbecker
01:08 PM bug #7578 (Closed): preseve null values in all mesurements during serialization of webservice res...
as reported in #6563 the double values which are `null` are serialized as `0.0` by json-lib this is plain wrong for a... Andreas Kohlbecker
12:20 PM bug #7577: Set Publish Flag for Subtree Dialog - Further Problems with Progressmonitor
In the end the cdm-remote instance crashed with a `java.lang.OutOfMemoryError: Java heap space` even if it has been s... Andreas Kohlbecker
12:18 PM bug #7577: Set Publish Flag for Subtree Dialog - Further Problems with Progressmonitor
A anylysis of the staktrace kane with jstack revels that it is `hibernate.search` taking all the CPU in order to inde... Andreas Kohlbecker
11:52 AM bug #7577: Set Publish Flag for Subtree Dialog - Further Problems with Progressmonitor
I tested again.
This time I set the publish flag to true, all taxa an synonmys intially are publish = false:
...
Andreas Kohlbecker
10:41 AM bug #7577 (New): Set Publish Flag for Subtree Dialog - Further Problems with Progressmonitor

Summarizing the insights from this examination I come to the conclusion that we need to work on the following:
1...
Andreas Kohlbecker
10:41 AM bug #7576 (Feedback): Set Publish Flag for Subtree Dialog - Problems with Progressmonitor
Andreas Kohlbecker
10:34 AM bug #7576: Set Publish Flag for Subtree Dialog - Problems with Progressmonitor
Hallo Katja,
ich weiß, dass du an diesem Problem gearbeitet hast, konnte aber kein Ticket dazu finden. Daher habe ...
Andreas Kohlbecker
10:30 AM bug #7576 (Closed): Set Publish Flag for Subtree Dialog - Problems with Progressmonitor
Setzen des Publish-Flags auf der kompletten Cichorienklassifikation:

Die Prozentanzeige bleibt bei 54.95% stehen ...
Andreas Kohlbecker

07/20/2018

05:42 PM bug #7557 (Resolved): TaxonNamePopEditor: com.vaadin.data.Property$ReadOnlyException on saving a ...
Andreas Kohlbecker
05:42 PM bug #7557 (Feedback): TaxonNamePopEditor: com.vaadin.data.Property$ReadOnlyException on saving a ...
I can no longer reproduce this issue since #7574 is fixed.
Henning, please try be yourself to reproduce this bug. ...
Andreas Kohlbecker
11:31 AM bug #7557: TaxonNamePopEditor: com.vaadin.data.Property$ReadOnlyException on saving a sub popup e...
[another report of the same bug:]
Lieber Andreas,

http://test.e-taxonomy.eu/cdmserver/phycobank_production/a...
Andreas Kohlbecker
05:34 PM bug #7574: IllegalStateException: Multiple representations ... when saving ReferenceEditor with ...
I hope and think that this issue is finally fixed now.
please review.
Andreas Kohlbecker
05:07 PM bug #7574 (Resolved): IllegalStateException: Multiple representations ... when saving ReferenceE...
Applied in changeset commit:cdm-vaadin|1641827e91d78dc483e225d1265e88d317e5d981. Andreas Kohlbecker
01:06 PM bug #7574 (Closed): IllegalStateException: Multiple representations ... when saving ReferenceEdi...
IllegalStateException: Multiple representations when saving ReferenceEditor with in Refercence
This happens when c...
Andreas Kohlbecker
05:27 PM bug #7558 (Duplicate): IllegalStateException: Multiple representations ... when saving first typ...
resolved also through the changes made for #7574, so this is clearly a duplicate Andreas Kohlbecker
01:10 PM feature request #7575 (Closed): Implement advanced quantitative cell editor
Editor should have two states:
* Edit a list of exact values
* edit aggregated values like min, max, etc.
Impr...
Patrick Plitzner
12:08 PM task #7573 (Closed): CollectionPopEditor superCollection only visible for advanced users
super collection field only visible for selected users (Role=CURATOR|ADMIN)
First of all can the concept of the su...
Andreas Kohlbecker
12:02 PM feature request #7572 (Closed): SpecimenTypeDesignationEditor: Collection combobox shows collecti...
this is required because ...
Fall 3: Es gibt einen Code, der identisch mit einen Index Herbariorum Code ist (NWU) ...
Andreas Kohlbecker
12:00 PM feature request #7571 (Closed): Collection editor has field to select and edit the institution
Wenn alle Institutionen einen Code haben, ist alles fein.

Normaler Weise gibt es 3 Fälle:
Fall 1: Code nac...
Andreas Kohlbecker
11:58 AM feature request #7570 (Closed): Institution editor implemented
An InstitutionPopupEditor is urgently needed for Collection and also important for References Andreas Kohlbecker
10:54 AM feature request #7569: SpecimenTypeDesignationEditor: Typedesignations should be ordered
fixed and ready for review. Andreas Kohlbecker
10:53 AM feature request #7569 (Resolved): SpecimenTypeDesignationEditor: Typedesignations should be ordered
Applied in changeset commit:cdm-vaadin|6055cbe049e1e8d7db866c07419c26f705acb5f8. Andreas Kohlbecker
10:52 AM feature request #7569 (Closed): SpecimenTypeDesignationEditor: Typedesignations should be ordered
[requested by Henning]:
Anfrage zur Sortierung der Typen:
Zeitlich und logisch gebe ich zuerst den Lectotypus an,...
Andreas Kohlbecker
10:28 AM bug #7566 (Resolved): TeamOrPersonField: some Persons can not be selected
Andreas Kohlbecker
08:34 AM bug #7566: TeamOrPersonField: some Persons can not be selected
These problems are related to the changes made for #7535
The root cause is the code line
~~~java
private v...
Andreas Kohlbecker
10:18 AM bug #7567 (Duplicate): SpecimenTypeDesignationEditor: Collection selection only set at second sel...
duplicate of #7566 Andreas Kohlbecker
10:14 AM bug #7568 (Closed): SpecimenTypeDesignationEditor: Collector Field not following the readonly sta...
Andreas Kohlbecker
10:13 AM bug #7568 (Resolved): SpecimenTypeDesignationEditor: Collector Field not following the readonly s...
Applied in changeset commit:cdm-vaadin|7278c990f5a49dd1a0fd17d9cd705717cfd4279f. Andreas Kohlbecker
08:56 AM bug #7568 (Closed): SpecimenTypeDesignationEditor: Collector Field not following the readonly sta...
Andreas Kohlbecker

07/19/2018

06:09 PM bug #7567 (Duplicate): SpecimenTypeDesignationEditor: Collection selection only set at second sel...
reported by Hening:
Auswahl wird beim ersten Auswählen nicht angenommen, erst nach 2. Auswahl.
Andreas Kohlbecker
06:03 PM bug #7566: TeamOrPersonField: some Persons can not be selected
I found one minor issue while investigating this: The NOMENCLATURAL_TITLE was being used for the caption of the coll... Andreas Kohlbecker
05:51 PM bug #7566 (Closed): TeamOrPersonField: some Persons can not be selected
This issue only occurs with some few Persons:
[originally reported by Hennig]
Folgende Eingabeprobleme im speci...
Andreas Kohlbecker
04:37 PM feature request #7496: TaxonNodes in cdm_taxontree can either link to taxon or reference search r...
implemented and ready for testing Andreas Kohlbecker
04:37 PM feature request #7496 (Resolved): TaxonNodes in cdm_taxontree can either link to taxon or referen...
Applied in changeset commit:cdm-dataportal|8a4d078dfa6e2200f5e4b25c28d1bdcb7d82cf7b. Andreas Kohlbecker
03:47 PM task #7565 (New): cdm_taxontree remove all code for using the tree to browse drupal term taxonomies
The cdm_taxontree has been developed to provide dual use:
1. Browse cdm classifications
1. Browse drupal term t...
Andreas Kohlbecker
03:25 PM bug #6356: taxontree sort order as in editor
no longer important for phycobank since we will model the classification with taxon relations Andreas Kohlbecker
03:14 PM feature request #7494: RegistrationSearch implemented
Implemented, please test. There are two ways to perform a search:
1. go to the registration search directly http:/...
Andreas Kohlbecker
03:08 PM task #7561 (Closed): OccurrencePortalController and FieldUnitDTO should not allow passing the det...
all done! Andreas Kohlbecker
03:06 PM feature request #6967 (Closed): RegistrationController identifier endpoints implemented
complete! Andreas Kohlbecker
03:05 PM feature request #7348 (Closed): RegistrationDTO webservices implemented
complete! Andreas Kohlbecker
11:43 AM feature request #7348: RegistrationDTO webservices implemented
Andreas Kohlbecker wrote:
> **TODO:**
>
> remove the following fields from DTO Serialization:
>
> * `typeDesi...
Andreas Kohlbecker
02:58 PM bug #7564 (Closed): remove Phycobank - Registration data - block and other outdated registration ...

~~also remove `render_registrations()` in name.inc?~~ need to keep this method since it is used in reder_taxon_or_n...
Andreas Kohlbecker
02:43 PM task #7562 (Resolved): Specimen table "Associated with" taxon is irritating and needs to be remov...
Hallo Norbert,
nach Rücksprache mit Patrick habe ich erfahren, dass die Anforderung das "assoziierte" Taxon bei de...
Andreas Kohlbecker
02:13 PM bug #7563 (In Progress): requests with %2F in URL are rejected by apache
Andreas Kohlbecker
02:00 PM bug #7563 (Closed): requests with %2F in URL are rejected by apache
requests like http://test.e-taxonomy.eu/cdmserver/phycobank_production/registrationDTO/identifier/http%+3+A%2F%2Fphyc... Andreas Kohlbecker
12:09 PM feature request #7495 (Resolved): Registration page implemented
ready for the review Andreas Kohlbecker

07/18/2018

09:38 PM bug #7554 (Closed): TeamOrPersonField: removing existing team and adding new team leaves nested c...
Thank you for reviewing. I will close this issue now. Andreas Kohlbecker
06:44 PM bug #7554 (Worksforme): TeamOrPersonField: removing existing team and adding new team leaves nest...
New multiauthor teams consisting of existing and new authors can be built without errors. Wolf-Henning Kusber
04:45 PM bug #7554 (Resolved): TeamOrPersonField: removing existing team and adding new team leaves nested...
Andreas Kohlbecker
04:45 PM bug #7554: TeamOrPersonField: removing existing team and adding new team leaves nested components...
With the last commit I no longer can reproduce any of the issues described in this ticket.
Please review.
Andreas Kohlbecker
06:03 PM task #7561 (In Progress): OccurrencePortalController and FieldUnitDTO should not allow passing th...
Andreas Kohlbecker
04:50 PM task #7561: OccurrencePortalController and FieldUnitDTO should not allow passing the determintati...
Point 1) in this issue description was also raised for the data_portal in #6816 as point 4). The "Associated with" in... Andreas Kohlbecker
03:45 PM task #7561 (Closed): OccurrencePortalController and FieldUnitDTO should not allow passing the det...
The OccurrencePortalController allows requests of the form `/portal/occurrence/{uuid}/derivateHierarchy?uuid={taxonUu... Andreas Kohlbecker
05:13 PM bug #6816 (Closed): [Dataportal] Specimen table issues
For me the issue raised in point 4) is not solved or answered satisfyingly. I stumbled over this in the attempt to us... Andreas Kohlbecker
04:59 PM task #7562 (Closed): Specimen table "Associated with" taxon is irritating and needs to be removed...
see issues #6816, #7561 for older information on this.
Andreas Kohlbecker
04:16 PM bug #7547: ToManyRelatedEntitiesComboboxSelect buttons enabled even if the containig editor is re...
the changes for this ticket cause other problems: #7554 Andreas Kohlbecker
03:05 PM bug #7559 (Resolved): possibly corrupted hiberante session after previous error on saving editor
clearing the session only after an exception seems to work by now.
Once it is confirmed that the session problems ...
Andreas Kohlbecker
03:00 PM bug #7559 (Worksforme): possibly corrupted hiberante session after previous error on saving editor
Andreas Kohlbecker
02:23 PM bug #7559: possibly corrupted hiberante session after previous error on saving editor
modified error handling: only clearing the session, no longer closing it in turn of errors commit:cdm-vaadin|a903034c Andreas Kohlbecker
02:21 PM bug #7559: possibly corrupted hiberante session after previous error on saving editor
Closing the session in turn of exceptions seems to cause other problems:
[reported by Henning]
Referenz „Ehrenb...
Andreas Kohlbecker
03:02 PM bug #7560 (Worksforme): LazyInitializationException (LIE) saving TaxonNamePopupEditor caused duri...
This was caused by a change related to #7559 and was fixed with commit:cdm-vaadin|f53fffc Andreas Kohlbecker
02:42 PM bug #7560 (Worksforme): LazyInitializationException (LIE) saving TaxonNamePopupEditor caused duri...

~~~
[phycobank] 14:25:46,718 ERROR [qtp759156157-24][eu.et.va.mv.AbstractPopupEditor] - org.springframework.orm.hi...
Andreas Kohlbecker

07/17/2018

09:28 PM bug #7558 (Resolved): IllegalStateException: Multiple representations ... when saving first type...
Andreas Kohlbecker
05:41 PM bug #7558 (Duplicate): IllegalStateException: Multiple representations ... when saving first typ...
New Registration -> new reference -> with rerenceType mit team (first autor + empty second) -> save -> reopen add fu... Andreas Kohlbecker
05:45 PM bug #7559 (Closed): possibly corrupted hiberante session after previous error on saving editor

this error has possibly been caused by the error documented in #7558
~~~
Jul 17, 2018 4:49:21 PM com.vaadin.s...
Andreas Kohlbecker
05:31 PM bug #7557 (Closed): TaxonNamePopEditor: com.vaadin.data.Property$ReadOnlyException on saving a su...
potentially caused by the same bug as #7574
from the stacktrace it is not clear which popup editor was being saved...
Andreas Kohlbecker
01:02 PM feature request #7494 (Resolved): RegistrationSearch implemented
Applied in changeset commit:cdm-dataportal|a6ae799bf137d61817db96bd5b32bdeed480e09e. Andreas Kohlbecker
12:35 PM bug #7552 (Closed): use TaggedText.entityReference to add style and uuid to html tags
Andreas Kohlbecker
12:35 PM bug #7552 (Resolved): use TaggedText.entityReference to add style and uuid to html tags
Applied in changeset commit:cdm-dataportal|55083981158955cd614c2c59cb4d965581686160. Andreas Kohlbecker
11:03 AM bug #7554 (In Progress): TeamOrPersonField: removing existing team and adding new team leaves nes...
The bug obviously still exists when a Person is added to an existing team. Andreas Kohlbecker
07:15 AM bug #7554: TeamOrPersonField: removing existing team and adding new team leaves nested components...
Hallo Henning,
ich befürchte der Test-Server war noch nicht auf dem neuesten Stand als du getestet hattest. BItte ...
Andreas Kohlbecker
09:42 AM feature request #7217: SpecimenTypedesignationsWorkingsetEditor: Longitute Latitude fields allo...
Known minor point:
On my computer, decimal values are only accepted if a Komma is used. A full stop is ignored by th...
Wolf-Henning Kusber

07/16/2018

09:00 PM bug #7555 (Closed): TaxonServiceImpl.findTaxaAndNames() broken for cichoriae searching for "Lapsa...

the request:
http://api.cybertaxonomy.org/cichorieae/portal/taxon/find.json?doTaxaByCommonNames=1&doMisapplie...
Andreas Kohlbecker
04:33 PM bug #7554: TeamOrPersonField: removing existing team and adding new team leaves nested components...
Problem solved, but not very user-friendly.
http://test.e-taxonomy.eu/cdmserver/phycobank_production/app/registrat...
Wolf-Henning Kusber
04:07 PM bug #7554: TeamOrPersonField: removing existing team and adding new team leaves nested components...
Problems solved, please test. Andreas Kohlbecker
04:06 PM bug #7554 (Resolved): TeamOrPersonField: removing existing team and adding new team leaves nested...
Applied in changeset commit:cdm-vaadin|1fef72149b63a405d436e3174ca513c3e961275b. Andreas Kohlbecker
03:57 PM bug #7554 (Closed): TeamOrPersonField: removing existing team and adding new team leaves nested c...

habe ein Problem mit einem neuen Autorenteam in der Section.
Workingset: http://test.e-taxonomy.eu/cdmserver/phyco...
Andreas Kohlbecker
03:26 PM task #7550: Move UserHelper from cdm-vaadin into cdmlib
can be closed if the changes are not again causing any obvious errors Andreas Kohlbecker
02:49 PM task #7550: Move UserHelper from cdm-vaadin into cdmlib
The `VaadinUserHelper` which was registering itself in the vaadin session was causing problems in the cdm-webapp.war ... Andreas Kohlbecker

07/12/2018

10:26 PM feature request #7348: RegistrationDTO webservices implemented
**TODO:**
remove the following fields from DTO Serialization:
* `typeDesignations`
* `orderdTypeDesignationWo...
Andreas Kohlbecker
10:23 PM task #7527: CdmEntityDaoBase.*ByParam() public and also available in the service layer
please review.
Andreas Kohlbecker
10:19 PM task #7550 (Resolved): Move UserHelper from cdm-vaadin into cdmlib
close if the changes are not causing any obvious errors Andreas Kohlbecker
02:15 PM task #7550 (Closed): Move UserHelper from cdm-vaadin into cdmlib
The `AbstractController` already duplicates some of the methods offered by the UserHelper. The UserHelper for now is... Andreas Kohlbecker
05:44 PM task #7553 (Closed): move TypeDesignationSetManagerIT to cdmlib
the `TypeDesignationSetManager` has been moved (#7348, commit:6e858cb7) to cdmlib but the according test still reside... Andreas Kohlbecker
05:31 PM bug #7552 (Closed): use TaggedText.entityReference to add style and uuid to html tags
TaggedText as provided by the cdmlib not provides TypedEntityReference information in the property TaggedText.entityR... Andreas Kohlbecker
05:06 PM feature request #7551 (Closed): TypeDesignationSetManager provides summary as TaggedText
TypeDesignationSetManager can provide a summary of the ordered type designations. For the dataportal the summary shou... Andreas Kohlbecker
04:58 PM feature request #6967 (Resolved): RegistrationController identifier endpoints implemented
Applied in changeset commit:cdmlib|f9bb9711ec4265c5862d4616477c24fc9a16fa2f. Andreas Kohlbecker
04:56 PM feature request #6967: RegistrationController identifier endpoints implemented
the endpoint `/registration/{localID}` is not needed, is it? Andreas Kohlbecker
02:07 PM task #7546: Better guidance for users when creating registrations for exising names
Dieser 2. Satz ist vielleicht wirklich überflüssig, er beleuchtet lediglich die Hintergünde zu Satz 1.
Ok, streich...
Andreas Kohlbecker
01:48 PM task #7546: Better guidance for users when creating registrations for exising names
Brauchen wir alle 3 Sätze. Der 2. ist schwer verständlich. Bin alles mit unserer native Speakerin durchgegangen. Ihr ... Wolf-Henning Kusber
12:39 PM feature request #7549 (Closed): Show tooltip for data aggregation in character matrix
When hovering over any cell of the summary row a tooltip should show up giving a brief statistical summary of the cur... Patrick Plitzner
10:16 AM feature request #7548 (In Progress): RegistrationWorkingSetEditor loads slowly with big working sets
The RegistrationWorkingSetEditor not only loads slowly when initially opened also when saving a popup editor the work... Andreas Kohlbecker

07/11/2018

03:47 PM task #7527 (Resolved): CdmEntityDaoBase.*ByParam() public and also available in the service layer
Applied in changeset commit:cdmlib|51ee66dc3a639019afbb58811e32c98e0f186b12. Andreas Kohlbecker
03:43 PM task #7527: CdmEntityDaoBase.*ByParam() public and also available in the service layer
... also `public Pager<T> page(Class<? extends T> clazz, String param, String queryString, MatchMode matchmode, List... Andreas Kohlbecker
03:04 PM task #7527 (In Progress): CdmEntityDaoBase.*ByParam() public and also available in the service layer
I implemented `public Pager<T> pageByRestrictions(Class<? extends T> clazz, String param, String queryString, MatchMo... Andreas Kohlbecker
01:31 PM bug #7547 (Closed): ToManyRelatedEntitiesComboboxSelect buttons enabled even if the containig edi...
fixed! Andreas Kohlbecker
01:31 PM bug #7547 (Resolved): ToManyRelatedEntitiesComboboxSelect buttons enabled even if the containig e...
Applied in changeset commit:cdm-vaadin|8a1add900f82f756d5df22205144a50b0deca0cb. Andreas Kohlbecker
01:13 PM bug #7547 (Closed): ToManyRelatedEntitiesComboboxSelect buttons enabled even if the containig edi...
see this screenshot for example:
![](picture507-1.png)
Andreas Kohlbecker
01:07 PM task #7546: Better guidance for users when creating registrations for exising names
done and ready for review.
When reviewing please have extra critical eyeball on the text close to the bottom of t...
Andreas Kohlbecker
01:04 PM task #7546 (Resolved): Better guidance for users when creating registrations for exising names
Applied in changeset commit:cdm-vaadin|cf9c36f82e17e2f5fb613ef6132994544c523a81. Andreas Kohlbecker
11:56 AM task #7546 (In Progress): Better guidance for users when creating registrations for exising names
A dialog is not the best solution, adding the required ui elements to the footer section of the workingset editor is ... Andreas Kohlbecker

07/10/2018

05:32 PM bug #7545 (Closed): IllegalStateException: Multiple representations ... when saving first typeDe...
perfekt! Wolf-Henning Kusber
04:39 PM bug #7545 (Resolved): IllegalStateException: Multiple representations ... when saving first type...
Applied in changeset commit:cdm-vaadin|af8ec722535f95fcccdc5f4fd4562238987d300a. Andreas Kohlbecker
03:56 PM bug #7545: IllegalStateException: Multiple representations ... when saving first typeDesignation...
I reproduced this issue.
Duplicate cdm entities only exist after pressing the save button for the new typedesigna...
Andreas Kohlbecker
02:58 PM bug #7545: IllegalStateException: Multiple representations ... when saving first typeDesignation...
The aftereffects disappeared after restarting the cdm-remote instance. So these secondary problems where most probabl... Andreas Kohlbecker
02:30 PM bug #7545: IllegalStateException: Multiple representations ... when saving first typeDesignation...
Hallo Henning,
durch den ersten Fehler wurde eine Registrierung erzeugt, die keine TypeDesignation hatte. Das sie ...
Andreas Kohlbecker
02:30 PM bug #7545: IllegalStateException: Multiple representations ... when saving first typeDesignation...
Und wenn man nach diesem Identifier sucht gibt es auch eine Fehlermeldung [#!list/inProgress]:
~~~
java.lang.Null...
Andreas Kohlbecker
02:29 PM bug #7545: IllegalStateException: Multiple representations ... when saving first typeDesignation...
Hallo,

nach dem Fehler, konnte ich keine neuen existierenden Namen auswählen (alter Fehler)
nach aus und einlogg...
Andreas Kohlbecker
02:29 PM bug #7545 (Closed): IllegalStateException: Multiple representations ... when saving first typeDe...
Henning reported this error which happened while creating a registration for the existing name *Rhopalodia hirudinifo... Andreas Kohlbecker
03:46 PM bug #7331: AdvancedBeanInitializer fails to initialize properties of preinitialized beans in the ...
Adding exported breakpoints from my eclipse which might help debugging this issue. Andreas Kohlbecker
03:37 PM bug #7523 (Rejected): RegistrationWorkingSetEditor: existing name combobox must only offer names ...
rejected in favor of #7546 Andreas Kohlbecker
12:04 PM bug #7523: RegistrationWorkingSetEditor: existing name combobox must only offer names which are n...
The above change has been applied after receiving the below email:
Hallo,

um vorgesehene Registrierungen (Ty...
Andreas Kohlbecker
03:35 PM task #7546 (Closed): Better guidance for users when creating registrations for exising names
The strategy followed in #7523 effectively blocks creating registrations for existing names, which makes not much sen... Andreas Kohlbecker
12:07 PM feature request #7348 (In Progress): RegistrationDTO webservices implemented
Andreas Kohlbecker
11:15 AM bug #7544 (Closed): Dragging a misapplication onto itself throws an exception in name editor
When dragging and dropping a misapplication onto itself in the taxon name editor the following exception is thrown an... Patrick Plitzner
10:57 AM bug #7538: Concurrent editing transaction strategy: Taxon turned into synonym by other user prior...
This could also be related to the same problem of concurrent editing:
"...mal wieder ein hübscher kleiner Fehler b...
Patrick Plitzner
10:48 AM bug #7543 (New): Name Editor does not auto-scroll during dragging
Hallo,
bei langen Synonymlisten scrolled die Liste nicht nach oben, wenn man ein Synonym dem Namen oder einem ande...
Patrick Plitzner
10:42 AM bug #7542 (Closed): Move synonym of homotypical group to taxon does not move the homotypical grou...
Hallo,
wir stoßen in neue Bug-Sphären vor.
Sophia hat versucht, im NameEditor die Reihenfolge der Synonyme zu k...
Patrick Plitzner
10:36 AM bug #7541 (Closed): Insufficient rights lead to missing focus in name editor
WGB:
wir haben angefangen die Iresines einzugeben. Auf Sophias Rechner traten dabei merkwürdige Fehler auf, und zw...
Patrick Plitzner
10:34 AM bug #7540 (New): RemoteAccessException when changing taxon to synonym in taxon navigator
"Hallo,
ich arbeite über Eduroam im Haus. Im Taxonomic Tree ändere ich den Status auf Synonym, dann langes Warten ...
Patrick Plitzner
10:31 AM bug #7539 (New): Synonym drag and drop sometimes does not refresh correctly
* one case is described in the parent ticket
* another case: "nach Synonym-Accepted Swap im NameEditor und anschließ...
Patrick Plitzner

07/09/2018

06:25 PM bug #7505 (Feedback): IllegalStateException: Multiple representations problem when adding Annotat...
@Andreas K.: Could you please test again if the multi rep exception still occurs? I re-enabled the parallel loading b... Patrick Plitzner
06:02 PM bug #7538 (New): Concurrent editing transaction strategy: Taxon turned into synonym by other user...
** Originally reported as:**
Liebes Edit-Team,
Manchmal erscheint dieser Fehler, wenn man nach Eingabe der Type...
Andreas Kohlbecker
03:36 PM bug #7537 (Rejected): Taxeditor can not connect to restarted, added cdm instance
After adding and starting, stopping and restarting the new cdn-server instance cdm_phycobank_production on edit test,... Andreas Kohlbecker
02:37 PM bug #7361 (Feedback): Consistent UI concept for create, new, add, remove, delete, edit buttons
Henning,
what do you think?
Andreas
Andreas Kohlbecker
02:36 PM bug #7361: Consistent UI concept for create, new, add, remove, delete, edit buttons
Another UI concept:
* use add row and remove icons like: ![](picture79-1.png), ![](picture79-2.png) from (https:/...
Andreas Kohlbecker
02:27 PM bug #7361: Consistent UI concept for create, new, add, remove, delete, edit buttons
adding a screenshot of the more consistren UI with the new "create-new" icon:
![](picture29-1.png)
Andreas Kohlbecker

07/06/2018

03:17 PM bug #7531 (Resolved): PermissionDeniedException on flushing registration with modified status eve...
Fixed by implementing solution 1)
@Andreas Müller: can you please review the changes in cdmlib?
Andreas Kohlbecker
12:03 PM feature request #7518 (Resolved): remaining issues for usage of NatTable for bulkeditor
Patrick Plitzner
11:59 AM bug #7535: TeamOrPersonField: remove OK button an select the chosen enitity immediately
implemented and ready for review Andreas Kohlbecker
08:27 AM bug #7535 (Resolved): TeamOrPersonField: remove OK button an select the chosen enitity immediately
Applied in changeset commit:cdm-vaadin|87bbccd430886b5a2b9c744e0dc018e7d6235920. Andreas Kohlbecker
08:02 AM bug #7535 (Closed): TeamOrPersonField: remove OK button an select the chosen enitity immediately

Henning:
Bei Auswahl eines Authors muss OK gedrückt werden, sonst wird eine leere Sektion gespeichert.
Vorschla...
Andreas Kohlbecker

07/05/2018

09:40 PM bug #7534 (Closed): registration list filters preserved in session
Andreas Kohlbecker
09:38 PM bug #7534 (Resolved): registration list filters preserved in session
Applied in changeset commit:cdm-vaadin|1e6c448a39b44580362af902142a2af98cfadf2c. Andreas Kohlbecker
06:30 PM bug #7534: registration list filters preserved in session
storing this data in the session is faster to implement Andreas Kohlbecker
06:01 PM bug #7534 (Closed): registration list filters preserved in session
symptoms caused by this issue:
1. registration list pager loses filters when navigating to other page - critical
...
Andreas Kohlbecker
06:27 PM feature request #7518 (In Progress): remaining issues for usage of NatTable for bulkeditor
Patrick Plitzner
05:59 PM feature request #7533: add typeStatus filter to registration list
Ready for review Andreas Kohlbecker
05:57 PM feature request #7533: add typeStatus filter to registration list
there are a couple of old data sets with typeStatus = null, therefore I am adding the null as filter option Andreas Kohlbecker
05:22 PM feature request #7533 (Resolved): add typeStatus filter to registration list
Applied in changeset commit:cdm-vaadin|56432bdd018d92bebb99ecfdaeca8721d7927416. Andreas Kohlbecker
03:26 PM feature request #7533 (Closed): add typeStatus filter to registration list
The filter options in the registration list view should offer to filter by TypeDesignation.status:
The filter will...
Andreas Kohlbecker
02:14 PM bug #7531: PermissionDeniedException on flushing registration with modified status even if the us...
Solution 1) still looks like the best option we have. Andreas Kohlbecker
11:53 AM bug #7531 (In Progress): PermissionDeniedException on flushing registration with modified status ...
Andreas Kohlbecker
10:27 AM bug #7505: IllegalStateException: Multiple representations problem when adding Annotation to name...
Andreas Müller wrote:
> shouldn't we close this as a kind of duplicate for #6321? With reverting #6321 this problem ...
Patrick Plitzner
07:59 AM bug #7222: Phycobank UI improve labels
Andreas Kohlbecker wrote:
> [Answer by Walter]
>
> Also nur Namen ab der Rangstufe Genus sind „uninomials“, finde...
Andreas Kohlbecker
07:55 AM bug #7222: Phycobank UI improve labels
Hallo,

dann schließe ich mich gerne der allgemeinen Definition an. Habe es noch mal nachgelesen und Walter hat Re...
Andreas Kohlbecker
07:55 AM bug #7222: Phycobank UI improve labels
[Answer by Walter]
Hallo,
merkwürdig, da sind Henning und ich (und Nick Turland) nicht der gleichen Meinung:

...
Andreas Kohlbecker

07/04/2018

05:28 PM bug #7524 (Closed): TaxonNameEditor blocks entering new names for genera
Andreas Kohlbecker
05:25 PM bug #7524 (Worksforme): TaxonNameEditor blocks entering new names for genera
works :) Wolf-Henning Kusber
04:49 PM bug #7524 (In Progress): TaxonNameEditor blocks entering new names for genera
Solved and ready for the review. Andreas Kohlbecker
04:42 PM bug #7524 (Resolved): TaxonNameEditor blocks entering new names for genera
Applied in changeset commit:cdm-vaadin|9361ce643c9b449ce33d77973ffe7d6ff9fc80b5. Andreas Kohlbecker
03:29 PM bug #7524 (In Progress): TaxonNameEditor blocks entering new names for genera
Andreas Kohlbecker
04:53 PM feature request #4227: handle generated resources in eclipse workspace
Patrick and I decided that you will be the next tester. Andreas Kohlbecker
04:50 PM feature request #4227: handle generated resources in eclipse workspace
I tried the A+ strategy and it worked fine.
1. git checkout generated-resources
1. run `setup-project.sh`
1. Ins...
Patrick Plitzner
04:48 PM feature request #4227: handle generated resources in eclipse workspace
[Patrick has tested strategy A+, these are his results:]
* had to apply the `/cdmlib-parent/lifecycle-mapping-meta...
Andreas Kohlbecker
03:24 PM bug #7385 (Closed): TaxonNameEditor adapt field visibility to rank
suggestion added to #7222#note-4 Andreas Kohlbecker
01:39 PM bug #7385: TaxonNameEditor adapt field visibility to rank
All is fine, except of one label:
Proposal: change "Infrageneric epithet" to "Infrageneric uninominal"
Reason: ...
Wolf-Henning Kusber
03:22 PM bug #7222 (Feedback): Phycobank UI improve labels
Henning suggested the following for the Name Editor:
* Proposal: change "Infrageneric epithet" to "Infrageneric un...
Andreas Kohlbecker
03:18 PM bug #7528: Allow changing the Registration status in the RegistrationWorkingsetEditor
This is now complete even if it is not yet possible for submitter to change the status due to the bug #7531. But this... Andreas Kohlbecker
03:06 PM bug #7528 (Resolved): Allow changing the Registration status in the RegistrationWorkingsetEditor
Applied in changeset commit:cdm-vaadin|725d1ff22626d3b584606a29756c4be7c750aca1. Andreas Kohlbecker
03:15 PM bug #7531 (Closed): PermissionDeniedException on flushing registration with modified status even ...
User with the Grantedauthority `REGISTRATION(PREPARATION).[UPDATE]{06649467-7c4f-4b8b-98e6-395e4d3af240}` changes th... Andreas Kohlbecker
01:58 PM feature request #7131 (Closed): Registrations ListView has pager to browse the whole result set
Perfekt! Wolf-Henning Kusber

07/03/2018

06:21 PM bug #7528 (In Progress): Allow changing the Registration status in the RegistrationWorkingsetEditor
Andreas Kohlbecker
06:00 PM feature request #7131: Registrations ListView has pager to browse the whole result set
Hi Henning,
the pager is ready, you can review this feature now.
Andreas
Andreas Kohlbecker
05:59 PM feature request #7131 (Resolved): Registrations ListView has pager to browse the whole result set
Applied in changeset commit:cdm-vaadin|1a4c1ca754f6e7d8ce2fb04adab9f14c226b24fc. Andreas Kohlbecker
12:04 PM feature request #4227: handle generated resources in eclipse workspace
Ich habe einen branch **generated-resources** committed in dem alle .classpath and .project files gelöscht sind: com... Andreas Kohlbecker
09:25 AM feature request #4227: handle generated resources in eclipse workspace
auch der Wechsel auf einen anderen Branch klappt mit diesem Setup problemlos:
1. start im develop branch
1. `gi...
Andreas Kohlbecker
09:13 AM feature request #4227: handle generated resources in eclipse workspace
Ich habe heute morgen noch eine radikalere Strategie getestet - Stratregie **A+**:
1. Projekt in Eclipse gelöscht,...
Andreas Kohlbecker
11:22 AM task #7364 (Closed): TaxonNameEditor supports editing of a validated name
Wolf-Henning Kusber
11:16 AM bug #7387 (Closed): TaxonNamePopEditor: ConstraintViolationException on saving a basionym
Wolf-Henning Kusber
11:16 AM bug #7387 (Worksforme): TaxonNamePopEditor: ConstraintViolationException on saving a basionym
Wolf-Henning Kusber
10:26 AM bug #7179 (Closed): Phycobank: set protectedTitleCaches = 1 where Person contains no data
finally fixed! All changes applied to the phycobank production database Andreas Kohlbecker
10:24 AM bug #7179: Phycobank: set protectedTitleCaches = 1 where Person contains no data
fixing protectedNomenclaturalTitleCache
~~~sql
UPDATE AgentBase a SET protectedNomenclaturalTitleCache = 1
...
Andreas Kohlbecker
10:22 AM bug #7179: Phycobank: set protectedTitleCaches = 1 where Person contains no data
fixing
~~~sql
UPDATE AgentBase a SET protectedCollectorTitleCache = 1
WHERE DTYPE = 'Person' AND a.givenNa...
Andreas Kohlbecker
10:10 AM bug #7179 (In Progress): Phycobank: set protectedTitleCaches = 1 where Person contains no data
This only has been fixed for protectedTitleCache. The flags protectedCollectorTitleCache and protectedNomenclaturalTi... Andreas Kohlbecker
09:44 AM bug #7529 (New): Wrong UUID after creating a GrantedAuthority for a Role like ROLE_PUBLISH
The ROLE_PUBLISH was not yet in the database and thus was created using the Taxeditor GrantedAuthority Create Dialog.... Andreas Kohlbecker

07/02/2018

11:01 PM feature request #4227: handle generated resources in eclipse workspace
Hiermit ist mein Monster-Feedback #4227#note-7 bis #4227#note-10 zu Ende.
und ich bin der Meinung, dass `eu.etaxon...
Andreas Kohlbecker
10:55 PM feature request #4227: handle generated resources in eclipse workspace
also nochmal die Strategie (A) mit m2 plugin aber ganz von vorn und unter Einbeziehung der bisherigen Erkentnisse:
...
Andreas Kohlbecker
10:31 PM feature request #4227: handle generated resources in eclipse workspace
... Mist ich hatte das "Set as Target Platform" vergessen, sonst hätte es wohl funktioniert, dies habe ich leider ers... Andreas Kohlbecker
09:58 PM feature request #4227: handle generated resources in eclipse workspace
... das Problem ist offenbar, dass eclipse die maven source folder nicht erkennt und und `eu.etaxonomy.taxeditor.cdml... Andreas Kohlbecker
09:41 PM feature request #4227: handle generated resources in eclipse workspace
1. Projekt in Eclipse gelöscht
1. git workspace komplett ge-cleant mit `git clean -x`
1. `rm eu.etaxonomy.taxeditor...
Andreas Kohlbecker
08:26 PM feature request #4227: handle generated resources in eclipse workspace
The only generated resources which still is causing a conflict after setting up the project in eclipse is the
~~~...
Andreas Kohlbecker
01:53 PM bug #7528 (Closed): Allow changing the Registration status in the RegistrationWorkingsetEditor
* Submitters should be able to set the status to **Curation** or to **Rejected**
* Curators should have all status a...
Andreas Kohlbecker
12:57 PM feature request #7131 (In Progress): Registrations ListView has pager to browse the whole result ...
Andreas Kohlbecker
12:51 PM bug #7523 (Resolved): RegistrationWorkingSetEditor: existing name combobox must only offer names ...
Applied in changeset commit:cdm-vaadin|cd993d9573144e244060321aee0c1fb28416a73f. Andreas Kohlbecker

07/01/2018

04:17 PM bug #7525: IdentifiableServiceBase findByTitle(), and listByTitle() methods support cdm Restrict...
Andreas Kohlbecker wrote:
> The methods with `List<Criterion> criteria` are offering a different type of flexibility...
Andreas Müller

06/29/2018

05:50 PM bug #7525: IdentifiableServiceBase findByTitle(), and listByTitle() methods support cdm Restrict...
The methods with `List<Criterion> criteria` are offering a different type of flexibility than those with `List<Restri... Andreas Kohlbecker
05:17 PM bug #7525 (Resolved): IdentifiableServiceBase findByTitle(), and listByTitle() methods support c...
Applied in changeset commit:cdmlib|a33babc0e0b88d6d8ee3968addd7f74bdaa14e93. Andreas Kohlbecker
05:27 PM task #7527 (Feedback): CdmEntityDaoBase.*ByParam() public and also available in the service layer
Hi Andreas,
what do you think about exposing these methods to the public?
Andreas
Andreas Kohlbecker
05:26 PM task #7527: CdmEntityDaoBase.*ByParam() public and also available in the service layer
I renamed the methods so that the more general an versatile methods have the shorter name. Andreas Kohlbecker
05:15 PM task #7527 (Closed): CdmEntityDaoBase.*ByParam() public and also available in the service layer
The methods
* `CdmEntityDaoBase.countBy(Class<? extends T> clazz, String param, String queryString, MatchMode matc...
Andreas Kohlbecker
10:33 AM feature request #7517 (New): Make search parameters like wildcards configurable
no, this is purely a taxeditor ticket. The service layer already offers many of these configurations but they can't b... Andreas Müller
10:24 AM bug #7505: IllegalStateException: Multiple representations problem when adding Annotation to name...
shouldn't we close this as a kind of duplicate for #6321? With reverting #6321 this problem was "solved" also as far ... Andreas Müller

06/28/2018

05:29 PM task #7526 (New): move IdentifiableDaoBase.findByReferenceTitle() into ReferenceDao
findByReferenceTitle() searches for "title" which only exists in `Reference.class` therefor it makes no sense having ... Andreas Kohlbecker
04:27 PM bug #6282: FSI image viewer not working with https
I am assuming that it will not be possible to make the http://media.bgbm.org/ available under https therefore I am se... Andreas Kohlbecker
04:18 PM bug #6282: FSI image viewer not working with https
This is most probably caused by binding the fsi viewer flash app via http instead of https:
~~~html
<div id="im...
Andreas Kohlbecker
02:46 PM feature request #7517 (Feedback): Make search parameters like wildcards configurable
I guess this is more a cdmlib issue than something to be implemented in the taxeditor. The service methods need to of... Andreas Kohlbecker
02:36 PM bug #7525 (In Progress): IdentifiableServiceBase findByTitle(), and listByTitle() methods suppor...
Andreas Kohlbecker
02:36 PM bug #7525 (Closed): IdentifiableServiceBase findByTitle(), and listByTitle() methods support cdm...
The methods `findByTitle()` and `listByTitle()` in IdentifiableServiceBase offer `List<Criterion> criteria` as method... Andreas Kohlbecker
12:56 PM task #7274 (Closed): GrantedAuthorityRevokingRegistrationUpdateLister: add the exception handling...
Andreas Kohlbecker
12:56 PM task #7274 (Resolved): GrantedAuthorityRevokingRegistrationUpdateLister: add the exception handli...
Applied in changeset commit:cdm-vaadin|4235f40e55e53768f68611ba51dc00721455e92e. Andreas Kohlbecker
12:17 PM bug #7524 (Closed): TaxonNameEditor blocks entering new names for genera
since the implementation of #7338 new genus names can not be entered. Andreas Kohlbecker
12:13 PM bug #7523 (Rejected): RegistrationWorkingSetEditor: existing name combobox must only offer names ...
The existing name combobox currently offers all names even those which are already registered.
The pager CdmFilterab...
Andreas Kohlbecker
12:06 PM bug #7522: Show warning if the someone has changed data in a registration graph which is not a cu...
Hi Henning,
we should discuss if this is really a requirement for data consistency.
Andreas
Andreas Kohlbecker
12:06 PM bug #7522 (New): Show warning if the someone has changed data in a registration graph which is no...
For registrations check if the adjacent name or typedesignation entity graphs have been upated by another user since ... Andreas Kohlbecker
11:55 AM bug #7520: Restore GrantedAuthorities removed by GrantedAuthorityRevokingRegistrationUpdateLister...
The next idea came up during a call with Andreas Müller:
The GrantedAuthorities are deleted as it is at the moment...
Andreas Kohlbecker
10:25 AM feature request #7417: Make pro parte and partial synonym relationships always visible in data po...
I guess something went wrong this morning with Redmine I only moved tickets which are "New" or in "Progress", when c... Andreas Kohlbecker
10:12 AM feature request #7417: Make pro parte and partial synonym relationships always visible in data po...
Isn't this solved (more or less) in 5.1 already? Andreas Müller
10:25 AM feature request #3984 (Closed): Easier reference selection - recently used references
works fine Andreas Müller
09:07 AM feature request #3984 (Resolved): Easier reference selection - recently used references
now the last 6 references are shown in the selection dialog. Katja Luther
10:21 AM feature request #7508 (Closed): Add language information to term representations
This was an mistake, I guess we can close it now, don't you? Andreas Kohlbecker
10:11 AM feature request #7508: Add language information to term representations
This should be solved in 5.1. Why did you move it? Andreas Müller
10:05 AM task #5375: cdm-server without jsvc
next major release is not to be used anymore Andreas Müller
09:57 AM bug #4847: Problem with session attributes for a UI used in different CDM Instances
Fabian can you please have a look on this issue? Andreas Müller
09:01 AM feature request #7463 (Closed): Move taxonnodes should be available for multiple selection
Katja Luther
09:00 AM feature request #7463: Move taxonnodes should be available for multiple selection
we have to have a look why the refresh sometimes does not work, therefore I create a new ticket and close this one (s... Katja Luther
09:00 AM bug #7521 (New): refresh of taxonnavigator sometimes does not work for moving taxonnodes
this is a remaining issue of 'Move taxonnodes should be available for multiple selection'
Andreas Müller wrote:
...
Katja Luther
08:55 AM feature request #7281 (In Progress): Implement bromelian import
Katja Luther
08:10 AM task #4911: improve performance of distributionInfoFor service
Hi Andreas, I am passing this issue to you, since you are in the euro+med sprint, ähhh, long-distance run! Andreas Kohlbecker

06/27/2018

12:02 AM bug #7092 (Resolved): Adapt dates in Nicks images after mediaCreated became TimePeriod
Andreas Müller
07:54 PM bug #7520: Restore GrantedAuthorities removed by GrantedAuthorityRevokingRegistrationUpdateLister...
The first idea of preserving the authorities in an Extension is not applicable since neither Registration nor User ar... Andreas Kohlbecker
03:53 PM bug #7520 (New): Restore GrantedAuthorities removed by GrantedAuthorityRevokingRegistrationUpdate...
Currently the `GrantedAuthorityRevokingRegistrationUpdateLister` withdraws GrantedAuthorities from the sumbitter when... Andreas Kohlbecker
04:02 PM feature request #6655 (Rejected): Implement a RegistrationManager with state machine
Andreas Kohlbecker
03:20 PM feature request #7417: Make pro parte and partial synonym relationships always visible in data po...
Andreas Müller wrote:
> Partial synonyms are not yet shown by default (at least not for cichorieae on test)
This ...
Andreas Kohlbecker
02:36 PM bug #7478 (Resolved): Fix pro parte synonym search
probably there are open issues that need to be moved to a new ticket. Andreas Müller
02:33 PM feature request #7517: Make search parameters like wildcards configurable
I strongly suggest creating a profound specification for this before anything is being implementing for this issue!
...
Andreas Kohlbecker
09:47 AM feature request #7517 (New): Make search parameters like wildcards configurable
For edaphobase users are used to use whitespace as wildcard.
We should make search parameters project and/or clien...
Andreas Müller
02:28 PM bug #7313 (Closed): eu.etaxonomy.cdm.dataInserter.RegistrationRequiredDataInserter add all terms ...
new ticket #7519 or remaining clean up.
I think wen can close this issue now. If you don't agree, Andreas, please ...
Andreas Kohlbecker
02:18 PM bug #7313: eu.etaxonomy.cdm.dataInserter.RegistrationRequiredDataInserter add all terms to vocabu...
Andreas Müller wrote:
> This should work.
>
> Personally I would first load/save the voc and then check the terms...
Andreas Kohlbecker
11:31 AM bug #7313 (Feedback): eu.etaxonomy.cdm.dataInserter.RegistrationRequiredDataInserter add all term...
This should work.
Personally I would first load/save the voc and then check the terms and add each term which is n...
Andreas Müller
02:26 PM bug #7519 (New): Avoid static terms
static terms defined in `KindOfUnitTerms` are directly used in other classes:
* RegistrationRequiredDataInserter...
Andreas Kohlbecker
02:14 PM feature request #7439 (Closed): Use NatTable for BulkEditor
close this ticket and created a new one with remaining issues (#7518) Katja Luther
01:40 PM feature request #7439: Use NatTable for BulkEditor
The editing mode of the table caused a widget is disposed exception and no menu was shown.
I reverted these changes ...
Katja Luther
01:12 PM feature request #7439: Use NatTable for BulkEditor
Now, column resizing is disabled which is better then before. However, we should resize the table to window size at t... Andreas Müller
01:11 PM feature request #7439: Use NatTable for BulkEditor
Andreas Müller wrote:
> Using the standard right click menu is cumbersome as clicking on a column cell immediately c...
Andreas Müller
02:12 PM feature request #7518 (Closed): remaining issues for usage of NatTable for bulkeditor
* ~~editable cell content/possibility to copy from a cell content~~
* ~~size of the columns should not be 50/50, but...
Katja Luther
01:38 PM feature request #4101 (Closed): Default value for publish bit of new taxa must be configurable vi...
Seems to work now. Andreas Müller
12:21 PM feature request #4101 (Resolved): Default value for publish bit of new taxa must be configurable ...
Katja Luther
12:20 PM feature request #4101 (Feedback): Default value for publish bit of new taxa must be configurable ...
Andreas Müller wrote:
> The preference is not stored in the DB. After reopening the preference view the publish flag...
Katja Luther
11:27 AM feature request #4101 (Resolved): Default value for publish bit of new taxa must be configurable ...
Katja Luther
10:46 AM feature request #4363 (Feedback): Show more informative message for unsupported specimen structur...
Patrick Plitzner wrote:
> Now, a more informative message is shown. The text is generated in the DerivedUnitFacade c...
Andreas Müller
09:21 AM bug #7227 (Worksforme): New name bulk editor shows all menu entries
We can close this ticket because with the NatTable implementation this problem does not exist anymore. Katja Luther

06/26/2018

05:58 PM feature request #4101: Default value for publish bit of new taxa must be configurable via DB pref...
Andreas Müller wrote:
> We may also want to show the new publish flag value in the "new taxon" dialog. But this migh...
Andreas Müller
05:56 PM feature request #4101 (Feedback): Default value for publish bit of new taxa must be configurable ...
The preference is not stored in the DB. After reopening the preference view the publish flag option is still not set. Andreas Müller
04:20 PM feature request #4101 (Resolved): Default value for publish bit of new taxa must be configurable ...
Katja Luther
04:20 PM feature request #4101 (Feedback): Default value for publish bit of new taxa must be configurable ...
Andreas Müller wrote:
> When trying to save I got:
>
> ~~~
> login : admin
> editor version : 5.1.0.20180619145...
Katja Luther
04:11 PM feature request #4101 (Resolved): Default value for publish bit of new taxa must be configurable ...
Applied in changeset commit:taxeditor|8360c0ff2bbc09ed93a487bd5e7451f197785edf. Katja Luther
05:38 PM bug #7227 (Feedback): New name bulk editor shows all menu entries
Do I understand correctly that the "Set marker" menu item appears due to #7516? If this is the case then we can close... Andreas Müller
04:38 PM bug #7227 (Resolved): New name bulk editor shows all menu entries
create a new ticket for the correct handling of details view, if no entity is selected and close this ticket. (see #7... Katja Luther
05:26 PM feature request #7463 (Feedback): Move taxonnodes should be available for multiple selection
Andreas Müller wrote:
> The refresh issue still exists and is critical. It seems to happen with large subtrees. E.g....
Andreas Müller
04:34 PM feature request #7463 (Resolved): Move taxonnodes should be available for multiple selection
now there are two subtasks: moving taxa and saving/reindexing, showing more subtasks are not really possible. please ... Katja Luther
05:12 PM feature request #7464 (Closed): make move Taxonnodes a longrunning task
Seems to be fully implemented. Andreas Müller
04:26 PM feature request #7464 (Resolved): make move Taxonnodes a longrunning task
this should be fixed now, please review Katja Luther
04:38 PM feature request #7417: Make pro parte and partial synonym relationships always visible in data po...
Andreas Müller wrote:
> The symbols are still used in incorrect direction. On the side of the "real" taxon (which ta...
Andreas Müller
04:31 PM feature request #7417: Make pro parte and partial synonym relationships always visible in data po...
Partial synonyms are not yet shown by default (at least not for cichorieae on test) Andreas Müller
04:30 PM feature request #7417: Make pro parte and partial synonym relationships always visible in data po...
Andreas Kohlbecker wrote:
> this is due to a LazyInitializationException occurring in the procession of the requests...
Andreas Müller
02:56 PM feature request #7417: Make pro parte and partial synonym relationships always visible in data po...
The pp synonyms should precede the misapplied names. Currently they come afterwards or the order is undefined. Andreas Müller
02:06 PM feature request #7417: Make pro parte and partial synonym relationships always visible in data po...
this is due to a LazyInitializationException occurring in the procession of the requests like:
http://160.45.63.17...
Andreas Kohlbecker
01:43 PM feature request #7417: Make pro parte and partial synonym relationships always visible in data po...
The same is true for euromed on test!! Andreas Müller
01:42 PM feature request #7417: Make pro parte and partial synonym relationships always visible in data po...
At least in cichorieae test (http://test.e-taxonomy.eu/dataportal/preview/cichorieae/admin/config/cdm_dataportal/sett... Andreas Müller
01:36 PM feature request #7417: Make pro parte and partial synonym relationships always visible in data po...
Also, as symbol is not a required field, we may also think about fallbacks in case symbol is NULL.
E.g. (symbol !...
Andreas Müller
01:33 PM feature request #7417 (Feedback): Make pro parte and partial synonym relationships always visible...
The symbols are still used in incorrect direction. On the side of the "real" taxon (which takes the role of the toTax... Andreas Müller
04:37 PM bug #7516 (New): details view has to show empty page if bulk editor has no item selected
Katja Luther
04:37 PM task #7515 (Resolved): TypeDesignationStatusComparator to sort by vocabulary first and then by te...

I stumbled over this when editing possibly invalid data with the Taxeditor:
Opening the "Details View" for a nam...
Andreas Kohlbecker
04:35 PM bug #7514 (Resolved): Change direct and inverse symbol for pro parte synonym and misapplied name ...
To have a consistent reading we need the current symbol to be the invers symbol as we show usually the inverse relati... Andreas Müller
04:33 PM bug #4362: Some File->New dialogs do not work
do you know, why the specimen are removed from the new menu? Katja Luther
04:29 PM feature request #3534 (Duplicate): Predefine inreference type when adding the inreference to a su...
Katja Luther
04:29 PM feature request #3534: Predefine inreference type when adding the inreference to a subreference
this is already implemented, see #1606 Katja Luther
04:27 PM feature request #7508: Add language information to term representations
Andreas Kohlbecker wrote:
> LazyInitializationException occurring in the procession of the requests like:
>
> htt...
Andreas Müller
02:08 PM feature request #7508: Add language information to term representations
LazyInitializationException occurring in the procession of the requests like:
http://160.45.63.175/cdmserver/cich...
Andreas Kohlbecker
01:18 PM feature request #7508: Add language information to term representations
i think you can close it! Andreas Kohlbecker
12:58 PM feature request #7508: Add language information to term representations
Should we close the ticket? Andreas Müller
04:00 PM bug #7313: eu.etaxonomy.cdm.dataInserter.RegistrationRequiredDataInserter add all terms to vocabu...
completed.
@a.mueller: please review my implementation
Andreas Kohlbecker
03:59 PM bug #7313 (Resolved): eu.etaxonomy.cdm.dataInserter.RegistrationRequiredDataInserter add all term...
Applied in changeset commit:cdm-vaadin|65d2936da23181f34fe6561dd4ae55c21c81d21b. Andreas Kohlbecker
12:51 PM bug #7313 (In Progress): eu.etaxonomy.cdm.dataInserter.RegistrationRequiredDataInserter add all t...
Andreas Kohlbecker
02:09 PM feature request #6659 (Closed): Show mediaCreated in dataportal
Works well. Andreas Müller
12:55 PM feature request #7285 (Closed): Edaphobase import: implement ranks Cohort, Hyporder
I think this can be closed as long as no other feedback comes. Andreas Müller
12:43 PM bug #7220 (Worksforme): Permission Denied in readonly mode of TypeDesignationEditor
I can not reproduce this issue, it seems as if this has been fixed meanwhile. Andreas Kohlbecker
12:24 PM bug #4847: Problem with session attributes for a UI used in different CDM Instances
This problem can generally be solved by using `vaadin-spring`. With `vaadin-spring` all UI Objects are Spring beans w... Andreas Kohlbecker
12:07 PM bug #4847 (In Progress): Problem with session attributes for a UI used in different CDM Instances
Andreas Kohlbecker
12:04 PM feature request #7439: Use NatTable for BulkEditor
Andreas Müller wrote:
> Having the markers for deduplication (target, candidate) in the text fields is not very comf...
Andreas Müller
12:01 PM feature request #7439: Use NatTable for BulkEditor
Changing the text in a cell for now should not be possible until #7503 is implemented. If NAT tables don't offer such... Andreas Müller
11:58 AM feature request #7439: Use NatTable for BulkEditor
Using the standard right click menu is cumbersome as clicking on a column cell immediately changes the cell into the ... Andreas Müller
11:46 AM feature request #7439: Use NatTable for BulkEditor
Having the markers for deduplication (target, candidate) in the text fields is not very comfortable and scalable. Whe... Andreas Müller
11:37 AM feature request #7439 (Feedback): Use NatTable for BulkEditor
Andreas Müller
11:23 AM feature request #7513 (New): Proper user feedback on attempt to access unpublished taxon
Hi Andreas,

ich frage mich, ob wir die Anzeige für ein unpubliziertes Taxon noch verbessern können, falls doch ma...
Andreas Kohlbecker
09:12 AM feature request #6321 (In Progress): Implement parallel loading + progress bar for loading object...
Move this to next milestone until it is reactivated Andreas Müller

06/25/2018

10:54 PM feature request #7458 (Resolved): Note field for TaxonName , NameType and SpecimenType editors
fully implemented and ready for the review Andreas Kohlbecker
07:14 PM feature request #7071: Reenable restore functionality
Upps, sorry, I see that this is not a master ticket. However, InProgress or New might still be the better status. Andreas Müller
07:13 PM feature request #7071: Reenable restore functionality
As this is a master ticket only should we switch from Feedback to InProgress? Suits better IMO. Andreas Müller
04:02 PM feature request #7071: Reenable restore functionality
Moving to the next release because it is not critical Patrick Plitzner
07:10 PM bug #7512: Saving in Specimen Tree View creates unwanted scrolling on windows
Please discuss who should be assignee. Maybe better KL as using windows. Andreas Müller
07:07 PM bug #7512 (New): Saving in Specimen Tree View creates unwanted scrolling on windows
Copy from #7418 and #7102
To reproduce the scrolling issue:
* Connect to test-rem_conf_am
* Open Specimen Tr...
Andreas Müller
07:09 PM bug #7418 (Closed): remaining specimen determination details view issues
As the scrolling issue is not related to determination details view I created a new ticket for this issue #7512 and r... Andreas Müller
04:00 PM bug #7418: remaining specimen determination details view issues
moving this to the next release as it is not critical Patrick Plitzner
12:07 PM bug #7418: remaining specimen determination details view issues
This behavior is not reproducable on a Linux machine. On Windows it happens when saving with the "Save" icon but it d... Patrick Plitzner
05:59 PM feature request #4363: Show more informative message for unsupported specimen structures in speci...
Now, a more informative message is shown. The text is generated in the DerivedUnitFacade constructor. It is interesti... Patrick Plitzner
05:55 PM feature request #4363 (Resolved): Show more informative message for unsupported specimen structur...
Applied in changeset commit:taxeditor|dcf98348abae2de24283207fddb7cb670c6028b6. Patrick Plitzner
04:17 PM bug #7079 (Closed): P2 updates not found
Patrick Plitzner
04:16 PM bug #7079: P2 updates not found
Patrick Plitzner wrote:
> @Andreas K.: Can you test this again. But you need to have a downloaded nightly build ...
Andreas Kohlbecker
03:59 PM bug #7079: P2 updates not found
The update did not work for after the release because of a wrong version tag due to the manual update script.
This...
Patrick Plitzner
04:02 PM feature request #7015: Migrate recent menu item
Moving to the next release because it is not critical Patrick Plitzner
03:51 PM feature request #7508: Add language information to term representations
The commits look good at first glance but I had no time to take an in depth look. Andreas Kohlbecker
03:16 PM feature request #6321: Implement parallel loading + progress bar for loading objects into the bul...
Parallel loading is temporarily deactivated. Fix for #7505 and update problem in name details view Patrick Plitzner
03:14 PM bug #7505: IllegalStateException: Multiple representations problem when adding Annotation to name...
This problem came up with the parallel loading of the search results in the bulk editor. The CDM entities were not co... Patrick Plitzner
01:19 PM bug #7505: IllegalStateException: Multiple representations problem when adding Annotation to name...
Further potential examples
* all names with genus name "Alpha"
* Navicula adminensis A. Boudou & A.A.Gontsch.
...
Andreas Kohlbecker
01:12 PM bug #7511 (Duplicate): LazyInitializationException (LIE) opening Registration Workingset Editor
Andreas Kohlbecker
12:35 PM bug #7511 (Duplicate): LazyInitializationException (LIE) opening Registration Workingset Editor
opening the Registration Workingset Editor for
Braun, A., A new Psammothidium species (Bacillariophyta, Achnanthi...
Andreas Kohlbecker
10:33 AM feature request #7510 (Worksforme): Allow entering aggregated/statistical data for single specime...
For some specimens it may be practical to enter statistical data. This should also be possible within or from the cha... Patrick Plitzner
10:18 AM feature request #7509 (Closed): Aggregate and persist specimen character data from character matrix
Currently we only have a temporary aggregation row and the aggregated values are not persisted.
For persisting the...
Patrick Plitzner
 

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