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From 06/04/2018 to 07/03/2018

07/03/2018

06:21 PM bug #7528 (In Progress): Allow changing the Registration status in the RegistrationWorkingsetEditor
Andreas Kohlbecker
06:00 PM feature request #7131: Registrations ListView has pager to browse the whole result set
Hi Henning,
the pager is ready, you can review this feature now.
Andreas
Andreas Kohlbecker
05:59 PM feature request #7131 (Resolved): Registrations ListView has pager to browse the whole result set
Applied in changeset commit:cdm-vaadin|1a4c1ca754f6e7d8ce2fb04adab9f14c226b24fc. Andreas Kohlbecker
12:04 PM feature request #4227: handle generated resources in eclipse workspace
Ich habe einen branch **generated-resources** committed in dem alle .classpath and .project files gelöscht sind: com... Andreas Kohlbecker
09:25 AM feature request #4227: handle generated resources in eclipse workspace
auch der Wechsel auf einen anderen Branch klappt mit diesem Setup problemlos:
1. start im develop branch
1. `gi...
Andreas Kohlbecker
09:13 AM feature request #4227: handle generated resources in eclipse workspace
Ich habe heute morgen noch eine radikalere Strategie getestet - Stratregie **A+**:
1. Projekt in Eclipse gelöscht,...
Andreas Kohlbecker
11:22 AM task #7364 (Closed): TaxonNameEditor supports editing of a validated name
Wolf-Henning Kusber
11:16 AM bug #7387 (Closed): TaxonNamePopEditor: ConstraintViolationException on saving a basionym
Wolf-Henning Kusber
11:16 AM bug #7387 (Worksforme): TaxonNamePopEditor: ConstraintViolationException on saving a basionym
Wolf-Henning Kusber
10:26 AM bug #7179 (Closed): Phycobank: set protectedTitleCaches = 1 where Person contains no data
finally fixed! All changes applied to the phycobank production database Andreas Kohlbecker
10:24 AM bug #7179: Phycobank: set protectedTitleCaches = 1 where Person contains no data
fixing protectedNomenclaturalTitleCache
~~~sql
UPDATE AgentBase a SET protectedNomenclaturalTitleCache = 1
...
Andreas Kohlbecker
10:22 AM bug #7179: Phycobank: set protectedTitleCaches = 1 where Person contains no data
fixing
~~~sql
UPDATE AgentBase a SET protectedCollectorTitleCache = 1
WHERE DTYPE = 'Person' AND a.givenNa...
Andreas Kohlbecker
10:10 AM bug #7179 (In Progress): Phycobank: set protectedTitleCaches = 1 where Person contains no data
This only has been fixed for protectedTitleCache. The flags protectedCollectorTitleCache and protectedNomenclaturalTi... Andreas Kohlbecker
09:44 AM bug #7529 (New): Wrong UUID after creating a GrantedAuthority for a Role like ROLE_PUBLISH
The ROLE_PUBLISH was not yet in the database and thus was created using the Taxeditor GrantedAuthority Create Dialog.... Andreas Kohlbecker

07/02/2018

11:01 PM feature request #4227: handle generated resources in eclipse workspace
Hiermit ist mein Monster-Feedback #4227#note-7 bis #4227#note-10 zu Ende.
und ich bin der Meinung, dass `eu.etaxon...
Andreas Kohlbecker
10:55 PM feature request #4227: handle generated resources in eclipse workspace
also nochmal die Strategie (A) mit m2 plugin aber ganz von vorn und unter Einbeziehung der bisherigen Erkentnisse:
...
Andreas Kohlbecker
10:31 PM feature request #4227: handle generated resources in eclipse workspace
... Mist ich hatte das "Set as Target Platform" vergessen, sonst hätte es wohl funktioniert, dies habe ich leider ers... Andreas Kohlbecker
09:58 PM feature request #4227: handle generated resources in eclipse workspace
... das Problem ist offenbar, dass eclipse die maven source folder nicht erkennt und und `eu.etaxonomy.taxeditor.cdml... Andreas Kohlbecker
09:41 PM feature request #4227: handle generated resources in eclipse workspace
1. Projekt in Eclipse gelöscht
1. git workspace komplett ge-cleant mit `git clean -x`
1. `rm eu.etaxonomy.taxeditor...
Andreas Kohlbecker
08:26 PM feature request #4227: handle generated resources in eclipse workspace
The only generated resources which still is causing a conflict after setting up the project in eclipse is the
~~~...
Andreas Kohlbecker
01:53 PM bug #7528 (Closed): Allow changing the Registration status in the RegistrationWorkingsetEditor
* Submitters should be able to set the status to **Curation** or to **Rejected**
* Curators should have all status a...
Andreas Kohlbecker
12:57 PM feature request #7131 (In Progress): Registrations ListView has pager to browse the whole result ...
Andreas Kohlbecker
12:51 PM bug #7523 (Resolved): RegistrationWorkingSetEditor: existing name combobox must only offer names ...
Applied in changeset commit:cdm-vaadin|cd993d9573144e244060321aee0c1fb28416a73f. Andreas Kohlbecker

07/01/2018

04:17 PM bug #7525: IdentifiableServiceBase findByTitle(), and listByTitle() methods support cdm Restrict...
Andreas Kohlbecker wrote:
> The methods with `List<Criterion> criteria` are offering a different type of flexibility...
Andreas Müller

06/29/2018

05:50 PM bug #7525: IdentifiableServiceBase findByTitle(), and listByTitle() methods support cdm Restrict...
The methods with `List<Criterion> criteria` are offering a different type of flexibility than those with `List<Restri... Andreas Kohlbecker
05:17 PM bug #7525 (Resolved): IdentifiableServiceBase findByTitle(), and listByTitle() methods support c...
Applied in changeset commit:cdmlib|a33babc0e0b88d6d8ee3968addd7f74bdaa14e93. Andreas Kohlbecker
05:27 PM task #7527 (Feedback): CdmEntityDaoBase.*ByParam() public and also available in the service layer
Hi Andreas,
what do you think about exposing these methods to the public?
Andreas
Andreas Kohlbecker
05:26 PM task #7527: CdmEntityDaoBase.*ByParam() public and also available in the service layer
I renamed the methods so that the more general an versatile methods have the shorter name. Andreas Kohlbecker
05:15 PM task #7527 (Closed): CdmEntityDaoBase.*ByParam() public and also available in the service layer
The methods
* `CdmEntityDaoBase.countBy(Class<? extends T> clazz, String param, String queryString, MatchMode matc...
Andreas Kohlbecker
10:33 AM feature request #7517 (New): Make search parameters like wildcards configurable
no, this is purely a taxeditor ticket. The service layer already offers many of these configurations but they can't b... Andreas Müller
10:24 AM bug #7505: IllegalStateException: Multiple representations problem when adding Annotation to name...
shouldn't we close this as a kind of duplicate for #6321? With reverting #6321 this problem was "solved" also as far ... Andreas Müller

06/28/2018

05:29 PM task #7526 (New): move IdentifiableDaoBase.findByReferenceTitle() into ReferenceDao
findByReferenceTitle() searches for "title" which only exists in `Reference.class` therefor it makes no sense having ... Andreas Kohlbecker
04:27 PM bug #6282: FSI image viewer not working with https
I am assuming that it will not be possible to make the http://media.bgbm.org/ available under https therefore I am se... Andreas Kohlbecker
04:18 PM bug #6282: FSI image viewer not working with https
This is most probably caused by binding the fsi viewer flash app via http instead of https:
~~~html
<div id="im...
Andreas Kohlbecker
02:46 PM feature request #7517 (Feedback): Make search parameters like wildcards configurable
I guess this is more a cdmlib issue than something to be implemented in the taxeditor. The service methods need to of... Andreas Kohlbecker
02:36 PM bug #7525 (In Progress): IdentifiableServiceBase findByTitle(), and listByTitle() methods suppor...
Andreas Kohlbecker
02:36 PM bug #7525 (Closed): IdentifiableServiceBase findByTitle(), and listByTitle() methods support cdm...
The methods `findByTitle()` and `listByTitle()` in IdentifiableServiceBase offer `List<Criterion> criteria` as method... Andreas Kohlbecker
12:56 PM task #7274 (Closed): GrantedAuthorityRevokingRegistrationUpdateLister: add the exception handling...
Andreas Kohlbecker
12:56 PM task #7274 (Resolved): GrantedAuthorityRevokingRegistrationUpdateLister: add the exception handli...
Applied in changeset commit:cdm-vaadin|4235f40e55e53768f68611ba51dc00721455e92e. Andreas Kohlbecker
12:17 PM bug #7524 (Closed): TaxonNameEditor blocks entering new names for genera
since the implementation of #7338 new genus names can not be entered. Andreas Kohlbecker
12:13 PM bug #7523 (Rejected): RegistrationWorkingSetEditor: existing name combobox must only offer names ...
The existing name combobox currently offers all names even those which are already registered.
The pager CdmFilterab...
Andreas Kohlbecker
12:06 PM bug #7522: Show warning if the someone has changed data in a registration graph which is not a cu...
Hi Henning,
we should discuss if this is really a requirement for data consistency.
Andreas
Andreas Kohlbecker
12:06 PM bug #7522 (New): Show warning if the someone has changed data in a registration graph which is no...
For registrations check if the adjacent name or typedesignation entity graphs have been upated by another user since ... Andreas Kohlbecker
11:55 AM bug #7520: Restore GrantedAuthorities removed by GrantedAuthorityRevokingRegistrationUpdateLister...
The next idea came up during a call with Andreas Müller:
The GrantedAuthorities are deleted as it is at the moment...
Andreas Kohlbecker
10:25 AM feature request #7417: Make pro parte and partial synonym relationships always visible in data po...
I guess something went wrong this morning with Redmine I only moved tickets which are "New" or in "Progress", when c... Andreas Kohlbecker
10:12 AM feature request #7417: Make pro parte and partial synonym relationships always visible in data po...
Isn't this solved (more or less) in 5.1 already? Andreas Müller
10:25 AM feature request #3984 (Closed): Easier reference selection - recently used references
works fine Andreas Müller
09:07 AM feature request #3984 (Resolved): Easier reference selection - recently used references
now the last 6 references are shown in the selection dialog. Katja Luther
10:21 AM feature request #7508 (Closed): Add language information to term representations
This was an mistake, I guess we can close it now, don't you? Andreas Kohlbecker
10:11 AM feature request #7508: Add language information to term representations
This should be solved in 5.1. Why did you move it? Andreas Müller
10:05 AM task #5375: cdm-server without jsvc
next major release is not to be used anymore Andreas Müller
09:57 AM bug #4847: Problem with session attributes for a UI used in different CDM Instances
Fabian can you please have a look on this issue? Andreas Müller
09:01 AM feature request #7463 (Closed): Move taxonnodes should be available for multiple selection
Katja Luther
09:00 AM feature request #7463: Move taxonnodes should be available for multiple selection
we have to have a look why the refresh sometimes does not work, therefore I create a new ticket and close this one (s... Katja Luther
09:00 AM bug #7521 (New): refresh of taxonnavigator sometimes does not work for moving taxonnodes
this is a remaining issue of 'Move taxonnodes should be available for multiple selection'
Andreas Müller wrote:
...
Katja Luther
08:55 AM feature request #7281 (In Progress): Implement bromelian import
Katja Luther
08:10 AM task #4911: improve performance of distributionInfoFor service
Hi Andreas, I am passing this issue to you, since you are in the euro+med sprint, ähhh, long-distance run! Andreas Kohlbecker

06/27/2018

12:02 AM bug #7092 (Resolved): Adapt dates in Nicks images after mediaCreated became TimePeriod
Andreas Müller
07:54 PM bug #7520: Restore GrantedAuthorities removed by GrantedAuthorityRevokingRegistrationUpdateLister...
The first idea of preserving the authorities in an Extension is not applicable since neither Registration nor User ar... Andreas Kohlbecker
03:53 PM bug #7520 (New): Restore GrantedAuthorities removed by GrantedAuthorityRevokingRegistrationUpdate...
Currently the `GrantedAuthorityRevokingRegistrationUpdateLister` withdraws GrantedAuthorities from the sumbitter when... Andreas Kohlbecker
04:02 PM feature request #6655 (Rejected): Implement a RegistrationManager with state machine
Andreas Kohlbecker
03:20 PM feature request #7417: Make pro parte and partial synonym relationships always visible in data po...
Andreas Müller wrote:
> Partial synonyms are not yet shown by default (at least not for cichorieae on test)
This ...
Andreas Kohlbecker
02:36 PM bug #7478 (Resolved): Fix pro parte synonym search
probably there are open issues that need to be moved to a new ticket. Andreas Müller
02:33 PM feature request #7517: Make search parameters like wildcards configurable
I strongly suggest creating a profound specification for this before anything is being implementing for this issue!
...
Andreas Kohlbecker
09:47 AM feature request #7517 (New): Make search parameters like wildcards configurable
For edaphobase users are used to use whitespace as wildcard.
We should make search parameters project and/or clien...
Andreas Müller
02:28 PM bug #7313 (Closed): eu.etaxonomy.cdm.dataInserter.RegistrationRequiredDataInserter add all terms ...
new ticket #7519 or remaining clean up.
I think wen can close this issue now. If you don't agree, Andreas, please ...
Andreas Kohlbecker
02:18 PM bug #7313: eu.etaxonomy.cdm.dataInserter.RegistrationRequiredDataInserter add all terms to vocabu...
Andreas Müller wrote:
> This should work.
>
> Personally I would first load/save the voc and then check the terms...
Andreas Kohlbecker
11:31 AM bug #7313 (Feedback): eu.etaxonomy.cdm.dataInserter.RegistrationRequiredDataInserter add all term...
This should work.
Personally I would first load/save the voc and then check the terms and add each term which is n...
Andreas Müller
02:26 PM bug #7519 (New): Avoid static terms
static terms defined in `KindOfUnitTerms` are directly used in other classes:
* RegistrationRequiredDataInserter...
Andreas Kohlbecker
02:14 PM feature request #7439 (Closed): Use NatTable for BulkEditor
close this ticket and created a new one with remaining issues (#7518) Katja Luther
01:40 PM feature request #7439: Use NatTable for BulkEditor
The editing mode of the table caused a widget is disposed exception and no menu was shown.
I reverted these changes ...
Katja Luther
01:12 PM feature request #7439: Use NatTable for BulkEditor
Now, column resizing is disabled which is better then before. However, we should resize the table to window size at t... Andreas Müller
01:11 PM feature request #7439: Use NatTable for BulkEditor
Andreas Müller wrote:
> Using the standard right click menu is cumbersome as clicking on a column cell immediately c...
Andreas Müller
02:12 PM feature request #7518 (Closed): remaining issues for usage of NatTable for bulkeditor
* ~~editable cell content/possibility to copy from a cell content~~
* ~~size of the columns should not be 50/50, but...
Katja Luther
01:38 PM feature request #4101 (Closed): Default value for publish bit of new taxa must be configurable vi...
Seems to work now. Andreas Müller
12:21 PM feature request #4101 (Resolved): Default value for publish bit of new taxa must be configurable ...
Katja Luther
12:20 PM feature request #4101 (Feedback): Default value for publish bit of new taxa must be configurable ...
Andreas Müller wrote:
> The preference is not stored in the DB. After reopening the preference view the publish flag...
Katja Luther
11:27 AM feature request #4101 (Resolved): Default value for publish bit of new taxa must be configurable ...
Katja Luther
10:46 AM feature request #4363 (Feedback): Show more informative message for unsupported specimen structur...
Patrick Plitzner wrote:
> Now, a more informative message is shown. The text is generated in the DerivedUnitFacade c...
Andreas Müller
09:21 AM bug #7227 (Worksforme): New name bulk editor shows all menu entries
We can close this ticket because with the NatTable implementation this problem does not exist anymore. Katja Luther

06/26/2018

05:58 PM feature request #4101: Default value for publish bit of new taxa must be configurable via DB pref...
Andreas Müller wrote:
> We may also want to show the new publish flag value in the "new taxon" dialog. But this migh...
Andreas Müller
05:56 PM feature request #4101 (Feedback): Default value for publish bit of new taxa must be configurable ...
The preference is not stored in the DB. After reopening the preference view the publish flag option is still not set. Andreas Müller
04:20 PM feature request #4101 (Resolved): Default value for publish bit of new taxa must be configurable ...
Katja Luther
04:20 PM feature request #4101 (Feedback): Default value for publish bit of new taxa must be configurable ...
Andreas Müller wrote:
> When trying to save I got:
>
> ~~~
> login : admin
> editor version : 5.1.0.20180619145...
Katja Luther
04:11 PM feature request #4101 (Resolved): Default value for publish bit of new taxa must be configurable ...
Applied in changeset commit:taxeditor|8360c0ff2bbc09ed93a487bd5e7451f197785edf. Katja Luther
05:38 PM bug #7227 (Feedback): New name bulk editor shows all menu entries
Do I understand correctly that the "Set marker" menu item appears due to #7516? If this is the case then we can close... Andreas Müller
04:38 PM bug #7227 (Resolved): New name bulk editor shows all menu entries
create a new ticket for the correct handling of details view, if no entity is selected and close this ticket. (see #7... Katja Luther
05:26 PM feature request #7463 (Feedback): Move taxonnodes should be available for multiple selection
Andreas Müller wrote:
> The refresh issue still exists and is critical. It seems to happen with large subtrees. E.g....
Andreas Müller
04:34 PM feature request #7463 (Resolved): Move taxonnodes should be available for multiple selection
now there are two subtasks: moving taxa and saving/reindexing, showing more subtasks are not really possible. please ... Katja Luther
05:12 PM feature request #7464 (Closed): make move Taxonnodes a longrunning task
Seems to be fully implemented. Andreas Müller
04:26 PM feature request #7464 (Resolved): make move Taxonnodes a longrunning task
this should be fixed now, please review Katja Luther
04:38 PM feature request #7417: Make pro parte and partial synonym relationships always visible in data po...
Andreas Müller wrote:
> The symbols are still used in incorrect direction. On the side of the "real" taxon (which ta...
Andreas Müller
04:31 PM feature request #7417: Make pro parte and partial synonym relationships always visible in data po...
Partial synonyms are not yet shown by default (at least not for cichorieae on test) Andreas Müller
04:30 PM feature request #7417: Make pro parte and partial synonym relationships always visible in data po...
Andreas Kohlbecker wrote:
> this is due to a LazyInitializationException occurring in the procession of the requests...
Andreas Müller
02:56 PM feature request #7417: Make pro parte and partial synonym relationships always visible in data po...
The pp synonyms should precede the misapplied names. Currently they come afterwards or the order is undefined. Andreas Müller
02:06 PM feature request #7417: Make pro parte and partial synonym relationships always visible in data po...
this is due to a LazyInitializationException occurring in the procession of the requests like:
http://160.45.63.17...
Andreas Kohlbecker
01:43 PM feature request #7417: Make pro parte and partial synonym relationships always visible in data po...
The same is true for euromed on test!! Andreas Müller
01:42 PM feature request #7417: Make pro parte and partial synonym relationships always visible in data po...
At least in cichorieae test (http://test.e-taxonomy.eu/dataportal/preview/cichorieae/admin/config/cdm_dataportal/sett... Andreas Müller
01:36 PM feature request #7417: Make pro parte and partial synonym relationships always visible in data po...
Also, as symbol is not a required field, we may also think about fallbacks in case symbol is NULL.
E.g. (symbol !...
Andreas Müller
01:33 PM feature request #7417 (Feedback): Make pro parte and partial synonym relationships always visible...
The symbols are still used in incorrect direction. On the side of the "real" taxon (which takes the role of the toTax... Andreas Müller
04:37 PM bug #7516 (New): details view has to show empty page if bulk editor has no item selected
Katja Luther
04:37 PM task #7515 (Resolved): TypeDesignationStatusComparator to sort by vocabulary first and then by te...

I stumbled over this when editing possibly invalid data with the Taxeditor:
Opening the "Details View" for a nam...
Andreas Kohlbecker
04:35 PM bug #7514 (Resolved): Change direct and inverse symbol for pro parte synonym and misapplied name ...
To have a consistent reading we need the current symbol to be the invers symbol as we show usually the inverse relati... Andreas Müller
04:33 PM bug #4362: Some File->New dialogs do not work
do you know, why the specimen are removed from the new menu? Katja Luther
04:29 PM feature request #3534 (Duplicate): Predefine inreference type when adding the inreference to a su...
Katja Luther
04:29 PM feature request #3534: Predefine inreference type when adding the inreference to a subreference
this is already implemented, see #1606 Katja Luther
04:27 PM feature request #7508: Add language information to term representations
Andreas Kohlbecker wrote:
> LazyInitializationException occurring in the procession of the requests like:
>
> htt...
Andreas Müller
02:08 PM feature request #7508: Add language information to term representations
LazyInitializationException occurring in the procession of the requests like:
http://160.45.63.175/cdmserver/cich...
Andreas Kohlbecker
01:18 PM feature request #7508: Add language information to term representations
i think you can close it! Andreas Kohlbecker
12:58 PM feature request #7508: Add language information to term representations
Should we close the ticket? Andreas Müller
04:00 PM bug #7313: eu.etaxonomy.cdm.dataInserter.RegistrationRequiredDataInserter add all terms to vocabu...
completed.
@a.mueller: please review my implementation
Andreas Kohlbecker
03:59 PM bug #7313 (Resolved): eu.etaxonomy.cdm.dataInserter.RegistrationRequiredDataInserter add all term...
Applied in changeset commit:cdm-vaadin|65d2936da23181f34fe6561dd4ae55c21c81d21b. Andreas Kohlbecker
12:51 PM bug #7313 (In Progress): eu.etaxonomy.cdm.dataInserter.RegistrationRequiredDataInserter add all t...
Andreas Kohlbecker
02:09 PM feature request #6659 (Closed): Show mediaCreated in dataportal
Works well. Andreas Müller
12:55 PM feature request #7285 (Closed): Edaphobase import: implement ranks Cohort, Hyporder
I think this can be closed as long as no other feedback comes. Andreas Müller
12:43 PM bug #7220 (Worksforme): Permission Denied in readonly mode of TypeDesignationEditor
I can not reproduce this issue, it seems as if this has been fixed meanwhile. Andreas Kohlbecker
12:24 PM bug #4847: Problem with session attributes for a UI used in different CDM Instances
This problem can generally be solved by using `vaadin-spring`. With `vaadin-spring` all UI Objects are Spring beans w... Andreas Kohlbecker
12:07 PM bug #4847 (In Progress): Problem with session attributes for a UI used in different CDM Instances
Andreas Kohlbecker
12:04 PM feature request #7439: Use NatTable for BulkEditor
Andreas Müller wrote:
> Having the markers for deduplication (target, candidate) in the text fields is not very comf...
Andreas Müller
12:01 PM feature request #7439: Use NatTable for BulkEditor
Changing the text in a cell for now should not be possible until #7503 is implemented. If NAT tables don't offer such... Andreas Müller
11:58 AM feature request #7439: Use NatTable for BulkEditor
Using the standard right click menu is cumbersome as clicking on a column cell immediately changes the cell into the ... Andreas Müller
11:46 AM feature request #7439: Use NatTable for BulkEditor
Having the markers for deduplication (target, candidate) in the text fields is not very comfortable and scalable. Whe... Andreas Müller
11:37 AM feature request #7439 (Feedback): Use NatTable for BulkEditor
Andreas Müller
11:23 AM feature request #7513 (New): Proper user feedback on attempt to access unpublished taxon
Hi Andreas,

ich frage mich, ob wir die Anzeige für ein unpubliziertes Taxon noch verbessern können, falls doch ma...
Andreas Kohlbecker
09:12 AM feature request #6321 (In Progress): Implement parallel loading + progress bar for loading object...
Move this to next milestone until it is reactivated Andreas Müller

06/25/2018

10:54 PM feature request #7458 (Resolved): Note field for TaxonName , NameType and SpecimenType editors
fully implemented and ready for the review Andreas Kohlbecker
07:14 PM feature request #7071: Reenable restore functionality
Upps, sorry, I see that this is not a master ticket. However, InProgress or New might still be the better status. Andreas Müller
07:13 PM feature request #7071: Reenable restore functionality
As this is a master ticket only should we switch from Feedback to InProgress? Suits better IMO. Andreas Müller
04:02 PM feature request #7071: Reenable restore functionality
Moving to the next release because it is not critical Patrick Plitzner
07:10 PM bug #7512: Saving in Specimen Tree View creates unwanted scrolling on windows
Please discuss who should be assignee. Maybe better KL as using windows. Andreas Müller
07:07 PM bug #7512 (New): Saving in Specimen Tree View creates unwanted scrolling on windows
Copy from #7418 and #7102
To reproduce the scrolling issue:
* Connect to test-rem_conf_am
* Open Specimen Tr...
Andreas Müller
07:09 PM bug #7418 (Closed): remaining specimen determination details view issues
As the scrolling issue is not related to determination details view I created a new ticket for this issue #7512 and r... Andreas Müller
04:00 PM bug #7418: remaining specimen determination details view issues
moving this to the next release as it is not critical Patrick Plitzner
12:07 PM bug #7418: remaining specimen determination details view issues
This behavior is not reproducable on a Linux machine. On Windows it happens when saving with the "Save" icon but it d... Patrick Plitzner
05:59 PM feature request #4363: Show more informative message for unsupported specimen structures in speci...
Now, a more informative message is shown. The text is generated in the DerivedUnitFacade constructor. It is interesti... Patrick Plitzner
05:55 PM feature request #4363 (Resolved): Show more informative message for unsupported specimen structur...
Applied in changeset commit:taxeditor|dcf98348abae2de24283207fddb7cb670c6028b6. Patrick Plitzner
04:17 PM bug #7079 (Closed): P2 updates not found
Patrick Plitzner
04:16 PM bug #7079: P2 updates not found
Patrick Plitzner wrote:
> @Andreas K.: Can you test this again. But you need to have a downloaded nightly build ...
Andreas Kohlbecker
03:59 PM bug #7079: P2 updates not found
The update did not work for after the release because of a wrong version tag due to the manual update script.
This...
Patrick Plitzner
04:02 PM feature request #7015: Migrate recent menu item
Moving to the next release because it is not critical Patrick Plitzner
03:51 PM feature request #7508: Add language information to term representations
The commits look good at first glance but I had no time to take an in depth look. Andreas Kohlbecker
03:16 PM feature request #6321: Implement parallel loading + progress bar for loading objects into the bul...
Parallel loading is temporarily deactivated. Fix for #7505 and update problem in name details view Patrick Plitzner
03:14 PM bug #7505: IllegalStateException: Multiple representations problem when adding Annotation to name...
This problem came up with the parallel loading of the search results in the bulk editor. The CDM entities were not co... Patrick Plitzner
01:19 PM bug #7505: IllegalStateException: Multiple representations problem when adding Annotation to name...
Further potential examples
* all names with genus name "Alpha"
* Navicula adminensis A. Boudou & A.A.Gontsch.
...
Andreas Kohlbecker
01:12 PM bug #7511 (Duplicate): LazyInitializationException (LIE) opening Registration Workingset Editor
Andreas Kohlbecker
12:35 PM bug #7511 (Duplicate): LazyInitializationException (LIE) opening Registration Workingset Editor
opening the Registration Workingset Editor for
Braun, A., A new Psammothidium species (Bacillariophyta, Achnanthi...
Andreas Kohlbecker
10:33 AM feature request #7510 (Worksforme): Allow entering aggregated/statistical data for single specime...
For some specimens it may be practical to enter statistical data. This should also be possible within or from the cha... Patrick Plitzner
10:18 AM feature request #7509 (Closed): Aggregate and persist specimen character data from character matrix
Currently we only have a temporary aggregation row and the aggregated values are not persisted.
For persisting the...
Patrick Plitzner

06/22/2018

02:37 PM feature request #7508: Add language information to term representations
Can you please review before release? Don't know if this all makes sense and is according to our general webservice s... Andreas Müller
11:33 AM feature request #7508 (Resolved): Add language information to term representations
Applied in changeset commit:cdmlib|75bfa4b6e6d3256d7b325ed9b5415b902e47b998. Andreas Müller
11:30 AM feature request #7508 (Closed): Add language information to term representations
Currently it is not possible to retrieve information which language a representation belongs to.
> [Andreas Mülle...
Andreas Müller
12:29 PM feature request #7439 (Resolved): Use NatTable for BulkEditor
Andreas Müller wrote:
> Patrick Plitzner wrote:
> > Comment #7439#note-12: Enabled sorting (Please open a new ticke...
Patrick Plitzner

06/21/2018

09:34 PM bug #7505: IllegalStateException: Multiple representations problem when adding Annotation to name...
Andreas Kohlbecker wrote:
> The name authorship fields are hidden and are populated with data automatically by infer...
Andreas Müller
09:24 PM bug #7505: IllegalStateException: Multiple representations problem when adding Annotation to name...
Andreas Müller wrote:
> I think it is not generally reproducable but in this case.
>
> It is interesting that the...
Andreas Kohlbecker
07:16 PM bug #7505: IllegalStateException: Multiple representations problem when adding Annotation to name...
I think it is not generally reproducable but in this case.
It is interesting that the duplicated person appears 2x...
Andreas Müller
03:38 PM bug #7505 (Closed): IllegalStateException: Multiple representations problem when adding Annotatio...
This exception is reproducible
~~~
login : admin
editor version : 5.1.0.201806211249
server : localhost (localh...
Andreas Kohlbecker
05:34 PM feature request #7507 (New): Advanced "Copy" in bulk editor
Copied from #7439:
* If the whole row has the focus we may want to copy all fields in csv or tsv format.
* For mu...
Patrick Plitzner
05:31 PM feature request #7506 (Duplicate): Allow direct editing bulk editor
For now, it is only possible to edit using the DetailsView.
With the NatTable we can change this behavior and allo...
Patrick Plitzner
04:39 PM feature request #7463: Move taxonnodes should be available for multiple selection
Andreas Müller wrote:
> By the way, moving the 4 children of Charyophyllaceae Juss. results in relativ fast counting...
Katja Luther
01:57 PM feature request #7463: Move taxonnodes should be available for multiple selection
By the way, moving the 4 children of Charyophyllaceae Juss. results in relativ fast counting 25, 50, 75 and 100% and ... Andreas Müller
01:37 PM feature request #7463: Move taxonnodes should be available for multiple selection
The refresh issue still exists and is critical. It seems to happen with large subtrees. E.g. I moved Charyophyllaceae... Andreas Müller
03:56 PM task #3560: Withheld unpublished taxa from webservice used in E+M dataportal
secured TaxonPortalController.doGetFromNameRelations and doGetToNameRelations Andreas Müller
03:40 PM task #3560: Withheld unpublished taxa from webservice used in E+M dataportal
secured TaxonPortalController.doGetMedia and doGetSubtreeMedia
Andreas Müller
09:56 AM task #3560: Withheld unpublished taxa from webservice used in E+M dataportal
I updated the ws-endpoint-usage.ods spread sheet by the information from the issue description.
There are now only...
Andreas Kohlbecker
11:46 AM feature request #7464 (Feedback): make move Taxonnodes a longrunning task
The jobs still appear in the Progress Monitor View even if they finished already. Is this wanted?
I compared with ...
Andreas Müller

06/20/2018

09:37 PM task #3560: Withheld unpublished taxa from webservice used in E+M dataportal
Andreas Kohlbecker wrote:
> first of all I analyzed the logfile on the production server and created a statistics on...
Andreas Müller
12:04 PM task #3560: Withheld unpublished taxa from webservice used in E+M dataportal
Hi Andreas,
first of all I analyzed the logfile on the production server and created a statistics on all webservic...
Andreas Kohlbecker
12:24 PM feature request #7439: Use NatTable for BulkEditor
Comment #7439#note-9: Focus loss is fixed
Comment #7439#note-11: Rendering problem is fixed
Comment #7439#note-12: ...
Patrick Plitzner
10:49 AM feature request #7439: Use NatTable for BulkEditor
Patrick Plitzner wrote:
> Comment #7439#note-12: Enabled sorting (Please open a new ticket specifying which addition...
Andreas Müller
10:37 AM feature request #7439: Use NatTable for BulkEditor
Patrick Plitzner wrote:
> Comment #7439#note-7: Cell text is left aligned
Great! Looks much better now.
One m...
Andreas Müller
10:31 AM feature request #7439: Use NatTable for BulkEditor
Andreas Müller wrote:
> For multi-select copy is not yet possible but might be a very nice feature (E.g. for copy an...
Andreas Müller
10:22 AM feature request #7439: Use NatTable for BulkEditor
Andreas Müller wrote:
> Copying parts of the titleCache within the table is not possible. This is a regression compa...
Andreas Müller
09:51 AM feature request #7439: Use NatTable for BulkEditor
Patrick Plitzner wrote:
> Comment #7439#note-13: Could not reproduce this behavior. Which bulk editor did you use? O...
Andreas Müller
09:47 AM feature request #7439: Use NatTable for BulkEditor
Also the problem is not necessarily related to opening multiple editors. But this is how you can easily reproduce the... Andreas Müller
09:39 AM feature request #7439: Use NatTable for BulkEditor
Patrick Plitzner wrote:
> Comment #7439#note-11: I can reproduce this as well when opening the third editor. Questio...
Andreas Müller
09:31 AM feature request #7439: Use NatTable for BulkEditor
Comment #7439#note-7: Cell text is left aligned
Comment #7439#note-11: I can reproduce this as well when opening the...
Patrick Plitzner
12:23 PM bug #7504 (New): Contradictory markers created when using bulk editor
steps to reproduce
1. Open any bulk editor
1. Add a marker to one element with "yes"
1. Add the same marker to t...
Patrick Plitzner
11:00 AM feature request #6321: Implement parallel loading + progress bar for loading objects into the bul...
Patrick Plitzner wrote:
> And this definitely is a problem which happens because of the re-searching. But we can res...
Andreas Müller
10:58 AM feature request #6321: Implement parallel loading + progress bar for loading objects into the bul...
Patrick Plitzner wrote:
> Ah, ok. This is a misunderstanding of the terms we used. For me (and code-wise), the **foc...
Andreas Müller
10:50 AM feature request #6321: Implement parallel loading + progress bar for loading objects into the bul...
See also #7439#note-29 for sorting with pre-sorted columns. Andreas Müller
09:30 AM feature request #6321: Implement parallel loading + progress bar for loading objects into the bul...
Ah, ok. This is a misunderstanding of the terms we used. For me (and code-wise), the **focus** refers to a view or ed... Patrick Plitzner
09:25 AM feature request #6321: Implement parallel loading + progress bar for loading objects into the bul...
Even worse than the focus loss is that we jump back to first record. This is definitely not acceptable. Andreas Müller
09:04 AM feature request #6321 (Feedback): Implement parallel loading + progress bar for loading objects i...
Patrick Plitzner wrote:
> Andreas Müller wrote:
> > Critical: setting focus does not work after reloading.
> >
...
Andreas Müller
08:22 AM feature request #6321 (Resolved): Implement parallel loading + progress bar for loading objects i...
Patrick Plitzner
08:22 AM feature request #6321: Implement parallel loading + progress bar for loading objects into the bul...
Andreas Müller wrote:
> Critical: setting focus does not work after reloading.
>
> E.g. after saving the focus i...
Patrick Plitzner
10:24 AM feature request #7503 (New): Make cells in bulk editor editable
Copied from #7439:
By the way, changing data within the columns may become an option now. E.g. changing the specif...
Andreas Müller
10:16 AM feature request #7502 (Closed): Add further columns to bulk editor
As a start we could always add id, uuid, created, updated. But if possible there should be a way to hide this columns... Andreas Müller
09:06 AM feature request #7464: make move Taxonnodes a longrunning task
please review Katja Luther
08:43 AM bug #7085 (In Progress): cdmserver logfiles getting too big, use RollingFileAppender
Andreas Kohlbecker
08:37 AM bug #7498 (Closed): ClassCastException on saving popup editor for validated name
Andreas Kohlbecker

06/19/2018

06:37 PM bug #7498: ClassCastException on saving popup editor for validated name
Eingabe fehlerfrei, Ticket kann geschlossen werden, Danke! Wolf-Henning Kusber
04:21 PM bug #7498: ClassCastException on saving popup editor for validated name
Hallo Henning,
das Problem ist behoben. Du kannst nun testen.
Andreas
Andreas Kohlbecker
04:15 PM bug #7498 (Resolved): ClassCastException on saving popup editor for validated name
Applied in changeset commit:cdm-vaadin|c43b6a2e7af9d79dae1d83d573d528c619892e85. Andreas Kohlbecker
04:13 PM bug #7498 (In Progress): ClassCastException on saving popup editor for validated name
Andreas Kohlbecker
04:10 PM bug #7498 (Closed): ClassCastException on saving popup editor for validated name

ei einer Validierung, Referenz eingebunden. Zurück zu validiertem Namen, dort Speicherfehler.
VG
Henning
~~~
...
Andreas Kohlbecker
06:09 PM feature request #4101: Default value for publish bit of new taxa must be configurable via DB pref...
We may also want to show the new publish flag value in the "new taxon" dialog. But this might be another ticket. Andreas Müller
06:07 PM feature request #4101: Default value for publish bit of new taxa must be configurable via DB pref...
When I set to "Don't set publish flag" the new child taxon still has publish flag = true. Also inheriting from parent... Andreas Müller
05:50 PM feature request #4101 (Feedback): Default value for publish bit of new taxa must be configurable ...
When trying to save I got:
~~~
login : admin
editor version : 5.1.0.201806191452
server : test.e-taxonomy.eu (e...
Andreas Müller
05:30 PM bug #7472 (Closed): lazy loading exception for MAN with type specimen
Saving works now and I also could not reproduce the old LLE anymore (though difficult to test).
=> close ticket.
Andreas Müller
04:22 PM bug #7472: lazy loading exception for MAN with type specimen
please review Katja Luther
04:18 PM bug #7472 (Resolved): lazy loading exception for MAN with type specimen
Applied in changeset commit:taxeditor|f63b9efba7c845673c35fd732e4cba7056c081ce. Katja Luther
03:54 PM bug #7472 (Feedback): lazy loading exception for MAN with type specimen
Now, changes in misapplied names and pro parte synonyms are not persisted anymore so I have to reopen tickets. If thi... Andreas Müller
05:13 PM task #3560 (Resolved): Withheld unpublished taxa from webservice used in E+M dataportal
I still want to unify the handling of unpublished a bit, but maybe you can already start testing if there some servic... Andreas Müller
05:04 PM feature request #7501 (New): Deduplicate MANs and pro parte synonyms in portal results
Currently, if searching for a MAN//ppSyn which is related to >1 accepted taxon, the search shows 2 (or more) equal en... Andreas Müller
05:02 PM feature request #7464: make move Taxonnodes a longrunning task
now the longrunning task can be canceled Katja Luther
04:28 PM bug #7500 (Closed): Can't open both related accepted taxa of reused MAN
In E+M we do have the misapplied taxon "*Hedysarum confertum* sec. Greuter & al." (uuid= fd76aa0c-f4ca-484e-ab2c-9bcb... Andreas Müller
04:25 PM bug #7499 (Closed): NPE when trying to open a taxon which belongs to 2 taxon nodes and cancel
works as expected Katja Luther
04:13 PM bug #7499: NPE when trying to open a taxon which belongs to 2 taxon nodes and cancel
please review Andreas Müller
04:13 PM bug #7499 (Resolved): NPE when trying to open a taxon which belongs to 2 taxon nodes and cancel
Applied in changeset commit:taxeditor|2ac7f4b62186854c15bd2fff8666873a6d853ae5. Andreas Müller
04:11 PM bug #7499 (Closed): NPE when trying to open a taxon which belongs to 2 taxon nodes and cancel

~~~
login : admin
editor version : 5.1.0.201806191201
server : test.e-taxonomy.eu (edit-test) / euromed
schema ...
Andreas Müller
03:49 PM bug #7478 (In Progress): Fix pro parte synonym search
Andreas Müller
01:25 PM task #7497: Dokument and add guides and hints to the UI
[Henning wrote]:
Durch die Validierung ist es nicht mehr möglich, das Species-Epitheton neu einzugeben.
D.h. ein...
Andreas Kohlbecker
01:12 PM task #7497 (Rejected): Dokument and add guides and hints to the UI

## TaxonNameEditor
* when mode VALIDATE_AGAINST_HIGHER_NAME_PART is enabled: "register new name if the needed ge...
Andreas Kohlbecker
01:13 PM task #7338: Validate taxon name against the higher taxon name
Wolf-Henning Kusber wrote:
> Fehler in #10 behoben, aber... #7497#note-3
Andreas Kohlbecker
11:55 AM task #7338: Validate taxon name against the higher taxon name
Fehler in #10 behoben, aber... Wolf-Henning Kusber
11:59 AM feature request #7496 (Closed): TaxonNodes in cdm_taxontree can either link to taxon or reference...
Currently clicking on a taxon name in the classification tree as rendered by the cdm_taxontree leads to the according... Andreas Kohlbecker
11:54 AM feature request #7495 (Closed): Registration page implemented
A cdm entity node type for `Registration`
----
implemented, example url: http://test.e-taxonomy.eu/dataportal/pre...
Andreas Kohlbecker
11:51 AM feature request #7494 (Closed): RegistrationSearch implemented
The RegistrationSearch will allow searching for Registrations by
* TaxonName (like search with wildcard)
* Regist...
Andreas Kohlbecker
11:40 AM feature request #6985 (Closed): display Registration metadata in footnotes
is solved Andreas Kohlbecker
11:37 AM feature request #6985: display Registration metadata in footnotes
for example http://test.e-taxonomy.eu/dataportal/preview/phycobank/cdm_dataportal/taxon/f48b4b22-0625-4820-ad82-abf12... Andreas Kohlbecker
10:49 AM bug #7482 (Closed): TaxonNameEditor relpacedSynonym not set after adding or editing the related name
Andreas Kohlbecker
10:49 AM bug #7482: TaxonNameEditor relpacedSynonym not set after adding or editing the related name
test OK Wolf-Henning Kusber

06/18/2018

08:34 PM bug #7493: Review all references to SynonymRelationshipTypes and adapt code if needed
Probably this is clear anyway but just if not I want to mention that SynonymRelationshipTypes are more or less still ... Andreas Müller
05:51 PM bug #7493: Review all references to SynonymRelationshipTypes and adapt code if needed
Cleaning the code in which the SynonymRelationshipTypes constants are used requires analysis of various code parts a... Andreas Kohlbecker
04:43 PM bug #7493 (New): Review all references to SynonymRelationshipTypes and adapt code if needed
SynonymRelationshipTypes habe been renamed to SynonymType in commit:fbeefcaf
The dataportal references the terms by...
Andreas Kohlbecker
08:23 PM feature request #7157 (Rejected): interim solution to mark pro parte synonyms in the dataportal
This interims solution was meant for the time when synonyms still had a pro parte/partial flag. Now this is handled v... Andreas Müller
04:20 PM feature request #7157 (Feedback): interim solution to mark pro parte synonyms in the dataportal
Andreas Kohlbecker
04:19 PM feature request #7157: interim solution to mark pro parte synonyms in the dataportal
There is no proParte Flag in the TaxonBase or in the Synonym class. Is this issue still relevant? Andreas Kohlbecker
05:32 PM feature request #7417: Make pro parte and partial synonym relationships always visible in data po...
finally done and ready for reviewing Andreas Kohlbecker
05:31 PM feature request #7417 (Resolved): Make pro parte and partial synonym relationships always visible...
Applied in changeset commit:cdm-dataportal|f95ba88b3d58a16df1a8eb013900268d66e0139d. Andreas Kohlbecker
05:13 PM feature request #7417: Make pro parte and partial synonym relationships always visible in data po...
As these new TaxonRelationshipTypes already are available in the production systems the accoring settings may already... Andreas Kohlbecker
04:21 PM feature request #7417 (In Progress): Make pro parte and partial synonym relationships always visi...
I forgot about updating the default settings regarding the pp synonyms Andreas Kohlbecker
03:46 PM feature request #7417: Make pro parte and partial synonym relationships always visible in data po...
Hi Andreas,
this is fixed now, please review.
Andreas
Andreas Kohlbecker
03:41 PM feature request #7417 (Resolved): Make pro parte and partial synonym relationships always visible...
Applied in changeset commit:cdm-dataportal|baebfef3f130d5b72a4f5a2d44ba41e89e7531ea. Andreas Kohlbecker
05:14 PM feature request #6321: Implement parallel loading + progress bar for loading objects into the bul...
Comment #6321#note-13: I tried opening the progress view several times and never saw this exception.
Comment #6321#n...
Patrick Plitzner
03:40 PM feature request #7492 (New): Withheld unpublished taxa from webservice used in other webservices
for open issues see #3560 and copy open issues to **this** ticket before starting.
BaseListController:
* doP...
Andreas Müller
03:35 PM feature request #7491 (New): [MASTER] Withheld unpublished taxa from webservice results and in DAOs
see also #1780, #3740, #3739
Andreas Müller
03:31 PM feature request #4363 (Feedback): Show more informative message for unsupported specimen structur...
So can we use the above suggestion as message? The current message is still not really correct or at least too unspec... Andreas Müller
02:56 PM bug #7486 (Closed): Fulltext taxon and name search not correct for Synonym based queries
Andreas Müller
01:41 PM bug #7486: Fulltext taxon and name search not correct for Synonym based queries
This works now for synonyms, for misapplied names and for common names. Andreas Kohlbecker
02:53 PM bug #7418 (Feedback): remaining specimen determination details view issues
The resizing issue seems to be solved now.
To reproduce the scrolling issue:
* Connect to test-rem_conf_am
* O...
Andreas Müller
02:40 PM task #7338: Validate taxon name against the higher taxon name
please test again, as the test server was not up to date when you did the last
test.
Andreas Kohlbecker
02:25 PM bug #7489 (Worksforme): ClassCastException clicking on edit refernce in
this issue really was due to my outdated editor installation. Andreas Kohlbecker
01:50 PM bug #7489 (Feedback): ClassCastException clicking on edit refernce in
please always test with the latest TaxEditor version. You are using 201806110837 which is not compatible with the lat... Andreas Müller
01:07 PM bug #7489: ClassCastException clicking on edit refernce in
Error is reproducible Andreas Kohlbecker
01:03 PM bug #7489 (Worksforme): ClassCastException clicking on edit refernce in
* open Taxon Picris rhagadioloides (L.) Desf., Tabl. Ecole Bot.: 89. 1804
* Activate MA "Picris rhagadioloides"
* ...
Andreas Kohlbecker
01:58 PM bug #7488: IllegalStateException: Multiple representations .. problem on saving Taxon with misapp...
Note: the above exceptions occurred with a 7 days old TaxEditor. Andreas Müller
01:57 PM bug #7488: IllegalStateException: Multiple representations .. problem on saving Taxon with misapp...
Katja, do we have a ticket for those MultRep exception that appeared after last time changing the CDM Cache code?
...
Andreas Müller
01:06 PM bug #7488: IllegalStateException: Multiple representations .. problem on saving Taxon with misapp...
I could not reproduce this error a second time. Andreas Kohlbecker
01:03 PM bug #7488 (New): IllegalStateException: Multiple representations .. problem on saving Taxon with ...
* Open Picris rhagadioloides (L.) Desf., Tabl. Ecole Bot.: 89. 1804 in the TaxonEditor
* Open details for misaplied ...
Andreas Kohlbecker
01:53 PM bug #7490 (Duplicate): Set published flag on subtree misses out misapplied names
duplicates #7450 Andreas Müller
01:36 PM bug #7490 (Duplicate): Set published flag on subtree misses out misapplied names
I set the publish flag on the whole Cichorieae Standart Classification.
The publish flags of misapplied names are st...
Andreas Kohlbecker
01:53 PM feature request #7422 (Closed): Set nom. illeg as default in NomenclaturalStatusType ComboBox
Katja Luther
01:38 PM feature request #7422 (Feedback): Set nom. illeg as default in NomenclaturalStatusType ComboBox
seems to work now.
Can you still add the last changeset and then close the ticket?
Andreas Müller
11:49 AM feature request #7422 (Resolved): Set nom. illeg as default in NomenclaturalStatusType ComboBox
now, the correct status for nom. illeg. is shown in name editor, please review Katja Luther
01:03 PM bug #7472 (Closed): lazy loading exception for MAN with type specimen
I could not created an exception anymore with my test data. However, I did not test with a copy from production so it... Andreas Müller
11:52 AM feature request #7010 (Closed): Adapt handlers for multiple selection in e4 views
I tested the navigator handlers and they seem to work (except for problems which are probably not related to this tic... Andreas Müller
11:51 AM feature request #7463: Move taxonnodes should be available for multiple selection
in classification combo, the classification of the first selected node is preselected, now. Katja Luther
10:05 AM feature request #7463: Move taxonnodes should be available for multiple selection
Katja Luther wrote:
> Open issues:
>
> * Don't move (grand)child nodes of selected parents to the top level.
> ...
Katja Luther

06/16/2018

10:22 PM bug #7487: Full text misapplied name search with area filter uses fixed relation type uuid
Created test TaxonServiceSearchTest.testFindTaxaAndNamesByFullText_AreaFilter_7487 .
Strange is that it seems to w...
Andreas Müller
06:29 PM bug #7487 (New): Full text misapplied name search with area filter uses fixed relation type uuid
This leads to problems when searching for pro parte and partial misapplied names and synonyms as misapplied names are... Andreas Müller
05:57 PM bug #7486 (Resolved): Fulltext taxon and name search not correct for Synonym based queries
Applied in changeset commit:cdmlib|8b9bedd725e557cc991845068e6ca3e3301110cc. Andreas Müller
05:30 PM bug #7486 (Closed): Fulltext taxon and name search not correct for Synonym based queries
If doTaxon is NOT selected, but doSynonym and (doMisappliedNamesor or doCommonNames) is selected the misapplied names... Andreas Müller

06/15/2018

09:49 PM feature request #7485 (New): Use tree table for reference and author bulk editor
For references we may want to immediately open the inreference(s).
For authors we may want to show Person records ...
Andreas Müller
09:33 PM feature request #7439: Use NatTable for BulkEditor
For multi-select copy is not yet possible but might be a very nice feature (e.g. for copy and paste larger datasets t... Andreas Müller
09:31 PM feature request #7439: Use NatTable for BulkEditor
"Copy" is not yet translated to German. Andreas Müller
09:29 PM feature request #7439: Use NatTable for BulkEditor
If the whole row has the focus we may want to copy all fields in csv or tsv format. Andreas Müller
09:28 PM feature request #7439: Use NatTable for BulkEditor
Copying always copies the titlecache column value even if the other column has the focus. For now this might be accep... Andreas Müller
09:24 PM feature request #7439: Use NatTable for BulkEditor
Copying parts of the titleCache within the table is not possible. This is a regression compared to the old table.
...
Andreas Müller
09:19 PM feature request #7439: Use NatTable for BulkEditor
Adding a marker does not update the "+" in supplemental data view. Maybe this is not related to NAT. Andreas Müller
09:15 PM feature request #7439: Use NatTable for BulkEditor
Can we remove the "Sort by" field (see attachment above)? It think it is not in use in all/most bulk editors.
Inst...
Andreas Müller
09:00 PM feature request #7439: Use NatTable for BulkEditor
Critical: sometimes the table does not show up after opening a bulk editor.
![](picture998-1.png)
Even after "sea...
Andreas Müller
08:27 PM feature request #7439: Use NatTable for BulkEditor
For focus loss after save see #6321#note-23 Andreas Müller
03:53 PM feature request #7439: Use NatTable for BulkEditor
Can we have left alignment instead of center alignment. Especially for the titleCache columns this is easier to read. Andreas Müller
08:41 PM bug #7484 (Closed): Protected titleCache handling not correct in Reference detail view
What I did:
* Opened a reference in bulk editor which had a protected titleCache/abbrevCache not protected => only...
Andreas Müller
08:16 PM feature request #6321: Implement parallel loading + progress bar for loading objects into the bul...
Critical: setting focus does not work after reloading.
E.g. after saving the focus is lost. Don't know if this is...
Andreas Müller
08:13 PM feature request #6321: Implement parallel loading + progress bar for loading objects into the bul...
Generally we need to think about reloading. For large datasets this might not be a good strategy as it takes too long... Andreas Müller
08:11 PM feature request #6321: Implement parallel loading + progress bar for loading objects into the bul...
Andreas Müller wrote:
> The loading should take place **sorted** so the new records are added to the end. Currently ...
Andreas Müller
08:06 PM feature request #6321: Implement parallel loading + progress bar for loading objects into the bul...
I think we should increase the number of records per page. 50, 100 and/or 200 seems reasonable. Probably this should ... Andreas Müller
04:29 PM feature request #6321: Implement parallel loading + progress bar for loading objects into the bul...
The progress monitor may show the pattern to search for. Currently it only shows something like "Load names". Better ... Andreas Müller
04:25 PM feature request #6321: Implement parallel loading + progress bar for loading objects into the bul...
Starting a new search while the old one is still running creates a warning "Wait until last search has finished or ca... Andreas Müller
04:19 PM feature request #6321: Implement parallel loading + progress bar for loading objects into the bul...
The progress bar (in progress view) does not show percentage so one does not know how long it will still take to full... Andreas Müller
04:10 PM feature request #6321: Implement parallel loading + progress bar for loading objects into the bul...
The progress bar does not show up as dialog so the ordinary user does not know how to cancel a running load. Andreas Müller
04:08 PM feature request #6321: Implement parallel loading + progress bar for loading objects into the bul...
The loading should take place **sorted** so the new records are added to the end. Currently one does not really under... Andreas Müller
03:39 PM feature request #6321 (Feedback): Implement parallel loading + progress bar for loading objects i...
When trying to open the progress monitor during loading I got the following exception:
~~~
login : admin
editor ...
Andreas Müller
07:48 PM task #7483: MobotOpenUrlServiceWrapper throws Exceptions in case of problems
This is not yet reviewed, otherwise it should have an Assignee. Andreas Müller
06:55 PM task #7483 (New): MobotOpenUrlServiceWrapper throws Exceptions in case of problems
AM:
In dem Zusammenhang habe ich mir auch mal die Klasse MobotOpenUrlServiceWrapper angeschaut. Dort gibt es 2 po...
Andreas Kohlbecker
07:01 PM bug #7482: TaxonNameEditor relpacedSynonym not set after adding or editing the related name
Mit Zwischenspeichern nach Eingabe der Art geht es.
Ohne Zwischenspeichern wird das Replaced Synonym nicht gespeiche...
Wolf-Henning Kusber
06:43 PM bug #7482: TaxonNameEditor relpacedSynonym not set after adding or editing the related name
ready for reviewing. Andreas Kohlbecker
06:43 PM bug #7482 (Resolved): TaxonNameEditor relpacedSynonym not set after adding or editing the related...
Applied in changeset commit:cdm-vaadin|1b1f9e4eca012ccf703ee2c31524448a77f1e2df. Andreas Kohlbecker
06:42 PM bug #7482 (Closed): TaxonNameEditor relpacedSynonym not set after adding or editing the related name
Hallo Andreas,

ich habe das Problem.
http://test.e-taxonomy.eu/cdmserver/phycobank/app/registration#!workingset/...
Andreas Kohlbecker
04:54 PM bug #7223 (Resolved): ReferenceEditor: disable fields depending on the Reference type
The layout works again. Even if there is still a lot of potential for improvements I think that this issue is solved ... Andreas Kohlbecker
03:38 PM bug #7223: ReferenceEditor: disable fields depending on the Reference type
Now that the fields are switched visible and unvisible it turns out that this can cause layout problems. These need t... Andreas Kohlbecker
02:19 PM bug #7223: ReferenceEditor: disable fields depending on the Reference type
Hi all,
the `ReferencePropertyDefinitions` would also be useful for the taxeditor to unclutter `ReferenceDetailEl...
Andreas Kohlbecker
04:37 PM bug #7475 (Closed): error when saving Reference editor with new empty Person in Team when OK or N...
Vorschläge zu besserer Usability sollten wir in ein neues Ticket erfassen, dieses hier bezieht sich auf den Fehlerfal... Andreas Kohlbecker
03:09 PM bug #7475: error when saving Reference editor with new empty Person in Team when OK or NEW was no...
Ausgewählte authors ohne OK werden ignoriert, es gibt keinen Fehler und speichern ist möglich.
Das author team kann...
Wolf-Henning Kusber
04:33 PM bug #7477 (Closed): TeamOrPersonField: ToManyRelatedEntitiesListSelect blocks removing new entries
ok, prima, dann schließe ich das Ticket. Andreas Kohlbecker
03:17 PM bug #7477: TeamOrPersonField: ToManyRelatedEntitiesListSelect blocks removing new entries
Add & delete of team members bei section möglich.
Auch der letzte verbleibende author kann gelöscht werden. Es gib...
Wolf-Henning Kusber
04:17 PM bug #7481 (Closed): ReferenceEditor: filter inReferences by applicable reference type
Currently the inReferences combobox offers all references which are in the system.
This could be limited to the refe...
Andreas Kohlbecker
04:02 PM bug #7480 (Closed): ReferenceEditor misses institution, organization and school fields
Andreas Kohlbecker
03:45 PM feature request #7464: make move Taxonnodes a longrunning task
some of the jobs (maybe those with exceptions) never seem to fully stop. Opening the progress monitor view still show... Andreas Müller
02:52 PM feature request #7464 (Resolved): make move Taxonnodes a longrunning task
Issues reported in related ticket #7463 Andreas Müller
03:40 PM feature request #7463: Move taxonnodes should be available for multiple selection
Andreas Müller wrote:
> While testing I got the following exception:
>
> ~~~
> login : admin
> editor version :...
Andreas Müller
03:03 PM feature request #7463: Move taxonnodes should be available for multiple selection
We may also check, if the new parent node is already the old parent node. These nodes should not be moved (not critic... Andreas Müller
02:51 PM feature request #7463: Move taxonnodes should be available for multiple selection
By the way, performance is surprisingly good. Moving hundreds of taxa takes only 2-3 sec, even if most of them are ro... Andreas Müller
02:24 PM feature request #7463: Move taxonnodes should be available for multiple selection
Katja Luther wrote:
> Andreas Müller wrote:
> > Katja Luther wrote:
> > > Andreas Müller wrote:
> > > > Critical:...
Andreas Müller
02:18 PM feature request #7463: Move taxonnodes should be available for multiple selection
Katja Luther wrote:
> Andreas Müller wrote:
> > I never got percentage > 0%. Also the "Updated Objects seem not to ...
Andreas Müller
02:15 PM feature request #7463: Move taxonnodes should be available for multiple selection
Andreas Müller wrote:
> Katja Luther wrote:
> > Andreas Müller wrote:
> > > Critical: when moving a taxon and its ...
Katja Luther
01:50 PM feature request #7463: Move taxonnodes should be available for multiple selection
Katja Luther wrote:
> Andreas Müller wrote:
> > Critical: when moving a taxon and its children (selected because th...
Andreas Müller
10:01 AM feature request #7463: Move taxonnodes should be available for multiple selection
Andreas Müller wrote:
> The tree does not correctly update after the task finished.
This seems to be the case, wh...
Katja Luther
09:33 AM feature request #7463: Move taxonnodes should be available for multiple selection
Andreas Müller wrote:
> I never got percentage > 0%. Also the "Updated Objects seem not to be clear. It usually show...
Katja Luther
09:28 AM feature request #7463: Move taxonnodes should be available for multiple selection
Andreas Müller wrote:
> Critical: when moving a taxon and its children (selected because the subtree was open) I wou...
Katja Luther
03:35 PM task #7479 (New): consider a cleaner implementation of adaptive reference field visibility
in turn of implementing #7223 the ` ReferencePropertyDefinitions`have been created which has the potential to help im... Andreas Kohlbecker
03:30 PM bug #7430 (Closed): New team members should be added at the end of the member list
Works well Andreas Müller
03:25 PM feature request #7422: Set nom. illeg as default in NomenclaturalStatusType ComboBox
Critical: ohh, there is an open issue.
When only creating the new status but not explicitly selecting nom. illeg. "n...
Andreas Müller
03:18 PM feature request #7422 (Feedback): Set nom. illeg as default in NomenclaturalStatusType ComboBox
Andreas Müller
03:17 PM feature request #7422: Set nom. illeg as default in NomenclaturalStatusType ComboBox
Andreas Müller wrote:
> However, I realized that the status in the drop down are not sorted at all. We should try to...
Andreas Müller
03:16 PM feature request #7422: Set nom. illeg as default in NomenclaturalStatusType ComboBox
Works now and ticket can be closed.
However, I realized that the status in the drop down are not sorted at all. We...
Andreas Müller
03:08 PM bug #7452 (Closed): TitleCache is not correctly set for new Person
Seems to work and code looks reasonable Andreas Müller
02:15 PM task #7338: Validate taxon name against the higher taxon name
automatic link to higher taxon up to genus possible.
Problem: 4 part infraspecific names:
Genus species-epithet [in...
Wolf-Henning Kusber
02:09 PM task #7338: Validate taxon name against the higher taxon name
New subsp./form: genus & species in drop down.
(New subp./form + basionym species ok)
New subsp./form + basionym = ...
Wolf-Henning Kusber
10:28 AM task #7338: Validate taxon name against the higher taxon name
Du testest das sicherlich auch noch mit Subpecies oder einem anderen intrapezifischen Rang?. Dafür habe ich die Valid... Andreas Kohlbecker
09:40 AM task #7338: Validate taxon name against the higher taxon name
angetestet mit Gattungsauswahl: funktioniert und sehr hilfreich. Wolf-Henning Kusber
01:16 PM bug #7478 (Resolved): Fix pro parte synonym search
Since pro parte synonyms are now pure taxon relationships (like misapplied names) the synonym search needs to be adap... Andreas Müller
11:11 AM feature request #7257 (Closed): Activate Enter key to send login in vaadin login
Andreas Kohlbecker
11:11 AM feature request #7257 (Resolved): Activate Enter key to send login in vaadin login
Applied in changeset commit:cdm-vaadin|5ccedc9e1fc292dc02f439d0c467f0fba9b7d2d6. Andreas Kohlbecker
09:26 AM bug #7476 (Closed): RegistrationWorkingSetEditor: existing name combobox broken after saving a po...
issue fixed, 2018-06-15 Wolf-Henning Kusber
08:02 AM bug #7476: RegistrationWorkingSetEditor: existing name combobox broken after saving a popup editor
Hallo Henning,
ich sehe gerade, dass der Testserver zu diesem Zeitpunkt als du getestet hattest noch nicht neu ge...
Andreas Kohlbecker
08:39 AM bug #6241: fix java doc problems in projects
There are far less problems as you've assumed after having a quick look. `mvn javadoc:javadoc` reports 294 broken @l... Andreas Kohlbecker
07:58 AM feature request #7461 (Closed): Add oder by ISSN an ISBN to the PagingProvider for all Reference ...
Great, so we can close this issue. Andreas Kohlbecker

06/14/2018

12:33 AM feature request #7463: Move taxonnodes should be available for multiple selection
Critical: when moving a taxon and its children (selected because the subtree was open) I would expect that the subtre... Andreas Müller
12:31 AM feature request #7463: Move taxonnodes should be available for multiple selection
I never got percentage > 0%. Also the "Updated Objects seem not to be clear. It usually shows the number of nodes mov... Andreas Müller
12:27 AM feature request #7463: Move taxonnodes should be available for multiple selection
The tree does not correctly update after the task finished. Andreas Müller
12:26 AM feature request #7463: Move taxonnodes should be available for multiple selection
Andreas Müller wrote:
> While testing I got the following exception:
>
... happend only once, usually it seems ...
Andreas Müller
12:22 AM feature request #7463 (Feedback): Move taxonnodes should be available for multiple selection
While testing I got the following exception:
~~~
login : admin
editor version : 5.1.0.201806142059
server : tes...
Andreas Müller
12:16 AM bug #6241: fix java doc problems in projects
Andreas K., do you have an opinion on this? Andreas Müller
12:15 AM bug #7445 (Closed): Empty term uri and isoXXX fields should be null
Andreas Müller
10:41 PM feature request #1080: Model changes for references, taxonBase, OriginalSource
remove version as it is misleading. Nothing changed really in 5.1, only a final decision was made. Andreas Müller
03:43 PM feature request #1080 (Closed): Model changes for references, taxonBase, OriginalSource
Andreas Kohlbecker
03:41 PM feature request #1080: Model changes for references, taxonBase, OriginalSource
As none of the freetext search functions is using this field for filtering we can remove the @IndexedEmbedded from `R... Andreas Kohlbecker
10:22 PM feature request #7461: Add oder by ISSN an ISBN to the PagingProvider for all Reference comboboxes
Doppelte Journals "Fotteea", "Hinter Indian Journal of Phycology" und Buch "Das Buch" werden jeweils fehlerfrei aufst... Wolf-Henning Kusber
12:10 PM feature request #7461 (Resolved): Add oder by ISSN an ISBN to the PagingProvider for all Referenc...
Andreas Kohlbecker
09:33 PM bug #7476: RegistrationWorkingSetEditor: existing name combobox broken after saving a popup editor
Tested, issue not fixed. 2018-06-14 Wolf-Henning Kusber
07:00 PM bug #7476: RegistrationWorkingSetEditor: existing name combobox broken after saving a popup editor
This issue is fixed. Please can you test and confirm? Andreas Kohlbecker
06:59 PM bug #7476 (Resolved): RegistrationWorkingSetEditor: existing name combobox broken after saving a ...
Applied in changeset commit:cdm-vaadin|b19b631ab1a1db7915e0ac4ac844c04a08e4b4ab. Andreas Kohlbecker
05:32 PM bug #7476 (Closed): RegistrationWorkingSetEditor: existing name combobox broken after saving a po...
After saving any popup editor the lookup mechanism of the existing name combobox no longer works.
This as reported...
Andreas Kohlbecker
06:07 PM bug #7475: error when saving Reference editor with new empty Person in Team when OK or NEW was no...
problem solved please review Andreas Kohlbecker
06:05 PM bug #7475 (Resolved): error when saving Reference editor with new empty Person in Team when OK or...
Applied in changeset commit:cdm-vaadin|eded01b72d14bd68f23f53712c2c920a3134eaa3. Andreas Kohlbecker
02:33 PM bug #7475 (Closed): error when saving Reference editor with new empty Person in Team when OK or N...
...Dazu wollte ich zunächst eine neue Referenz erstellen.
Neues Autorenteam mit einem neu erstellten Autor, hatte be...
Andreas Kohlbecker
05:56 PM bug #7477: TeamOrPersonField: ToManyRelatedEntitiesListSelect blocks removing new entries
Now additional entries can be be removed except of the last one. there must always at least one entry.
@Henning: p...
Andreas Kohlbecker
05:54 PM bug #7477 (Resolved): TeamOrPersonField: ToManyRelatedEntitiesListSelect blocks removing new entries
Applied in changeset commit:cdm-vaadin|06b79df2f504001e832078bd928212071f1226cc. Andreas Kohlbecker
05:37 PM bug #7477 (Closed): TeamOrPersonField: ToManyRelatedEntitiesListSelect blocks removing new entries
after adding a new entry the remove (-) button is disabled. Newly created Persons can not be removed.
![](picture...
Andreas Kohlbecker
03:18 PM bug #7386: TaxonNamePopEditor: com.vaadin.data.Property$ReadOnlyException on saving a basionym
I tried once again to reproduce this without success. Can you still reproduce the error? Andreas Kohlbecker
03:17 PM bug #7386: TaxonNamePopEditor: com.vaadin.data.Property$ReadOnlyException on saving a basionym
Henning wrote:
http://test.e-taxonomy.eu/cdmserver/phycobank/app/registration#!workingset/bd075280-f7ff-401b-83...
Andreas Kohlbecker
03:12 PM bug #7327 (Duplicate): ReferencePopupEditor: multiple exceptions and problems during creation of ...
Hallo Hening,
ich habe den Eindruck, dass sich dein letzter Kommentar auf eine Problematik mit dem nomenklatroris...
Andreas Kohlbecker
01:31 PM bug #6276: Nomenclatural references show parsed date string instead of publication year
[Henning wrote:]
Im Produktionssystem wird als Publikationsdatum ein deutsches Datum eingesetzt. Es gibt auch ein ...
Andreas Kohlbecker
12:23 PM task #7466 (New): Use makers to identify references for ICBN or other codes
Andreas Kohlbecker
12:21 PM bug #5477 (Closed): lucene index not updated in all cases after Taxon.addMisappliedName
looks good and seems to work since the test is now running successfuly. Andreas Kohlbecker
12:19 PM bug #7451 (Closed): ExternalLinks [ext-links]: update search urls
Andreas Kohlbecker
12:08 PM task #7338 (Resolved): Validate taxon name against the higher taxon name
@Henning This is now fully implemented. You can start testing this feature. Andreas Kohlbecker

06/13/2018

06:08 PM bug #7467 (Closed): taxon name parts lookup method with support for wildcard searches
Andreas Kohlbecker
06:06 PM bug #7467 (Resolved): taxon name parts lookup method with support for wildcard searches
Applied in changeset commit:cdmlib|9fc2a8a0de9a103ea0dbb1e9391000753b744ae2. Andreas Kohlbecker
03:00 PM task #7474: Unify code base for moving taxon nodes
to move several nodes was available, this was a merge problem, I will commit the fix of the regression Katja Luther
02:48 PM task #7474 (New): Unify code base for moving taxon nodes
There are two ways to move taxon nodes:
* via drag and drop
* via context menu
They do not entirely use the sa...
Patrick Plitzner
02:45 PM feature request #7422: Set nom. illeg as default in NomenclaturalStatusType ComboBox
please review Katja Luther
02:44 PM feature request #7422 (Resolved): Set nom. illeg as default in NomenclaturalStatusType ComboBox
Applied in changeset commit:taxeditor|0efab2895d93de6bf45d1375b7494fe2c96f33ac. Katja Luther
02:19 PM feature request #7473 (New): Replace PropertyChangeEvent architecture with e4 event bus in detail...
With the current architecture many redundant events are generated to refresh the details view. This can be optimized ... Patrick Plitzner
02:09 PM feature request #7463 (Resolved): Move taxonnodes should be available for multiple selection
please review Katja Luther
01:01 PM bug #7472: lazy loading exception for MAN with type specimen
please review if everything is solved now. Katja Luther
01:00 PM bug #7472 (Resolved): lazy loading exception for MAN with type specimen
Applied in changeset commit:taxeditor|26cc98f0fe93d159407c4ee093034ae1360b6755. Katja Luther
12:53 PM bug #7472 (Closed): lazy loading exception for MAN with type specimen
mail WB:
bei N. sumatrana in der Flora Malesiana Concepts Klassifikation wollte ich das (falsche) p.p. Synonym Nep...
Katja Luther

06/12/2018

09:58 PM bug #5477 (Resolved): lucene index not updated in all cases after Taxon.addMisappliedName
Seems to be fixed with using @ContainedIn on relationsToThisTaxon and relationsfromThisTaxon.
Please review.
Andreas Müller
06:34 PM bug #7471 (New): Invalid use of DefaultPager
found a couple of wrong usages of the DefaultPagerImpl constructor in `NameServiceImpl`:
~~~java
DefaultPagerImpl...
Andreas Kohlbecker
10:38 AM feature request #7470: Verbatim type designation information
WGB:
das nochmal mit erweitertem Empfängerkreis. Katja, wie wird denn jetzt eigentlich die Type designation im CDM...
Andreas Müller
10:29 AM feature request #7470: Verbatim type designation information
WGB:
ein modernes Zitat: Nepenthes armin Jebb & Cheek:
“Type: Argent & Reynoso 8936 (holotype K; isotypes E, ...
Andreas Müller
10:15 AM feature request #7470 (Closed): Verbatim type designation information
WGB:
Es ist häufig notwendig, die Typus-Angabe aus dem Protolog verbatim zu zitieren, da die atomisierte Informati...
Andreas Müller

06/11/2018

06:50 PM bug #7469 (Closed): Updated script for individualCount column type in Postgres
Andreas Müller
06:49 PM bug #7469 (Resolved): Updated script for individualCount column type in Postgres
Applied in changeset commit:cdmlib|e82fdff4901ef8a8f99fffb1460cb143cd770567. Andreas Müller
06:19 PM bug #7469 (Closed): Updated script for individualCount column type in Postgres
The ColumnTypeChanger in update script does not work as expected for Postgres.
It throws exceptions that the opera...
Andreas Müller
06:20 PM bug #7468 (Closed): Updated script for mediaCreated does not work for PostGreSQL
Andreas Müller
03:36 PM bug #7468 (Resolved): Updated script for mediaCreated does not work for PostGreSQL
Applied in changeset commit:cdmlib|870bdcfa2c6d2c6575ae87c56c9b9b2a17aa6745. Andreas Müller
03:03 PM bug #7468 (Closed): Updated script for mediaCreated does not work for PostGreSQL
In "Copy mediaCreated to new columns" the cast from timestamp to string does not work Andreas Müller
04:57 PM bug #7418: remaining specimen determination details view issues
Now, the element is resized after editing.
But I could not reproduce the scrolling bug.
Patrick Plitzner
04:56 PM bug #7418 (Resolved): remaining specimen determination details view issues
Applied in changeset commit:taxeditor|5e9ddd814e4727cce615ee85e7454060357fda3c. Patrick Plitzner
04:08 PM bug #7467: taxon name parts lookup method with support for wildcard searches
After discussing this with Andreas Müller we decided to create another more dedicated lookup method which won't load ... Andreas Kohlbecker
01:27 PM bug #7467 (Closed): taxon name parts lookup method with support for wildcard searches
implement a taxon name parts lookup method in the dao and service layer with support for wildcard searches.
If a n...
Andreas Kohlbecker
12:35 PM bug #6296: Simple search for common names returns duplicates
duplicates are no longer returned, so this issue can in principle be closed, however, as last step cleaning up commen... Andreas Kohlbecker
12:24 PM feature request #4363 (Resolved): Show more informative message for unsupported specimen structur...
I don't have a test DB where there is a DerivedUnit with multiple FieldUnits.
But I added the possibility to show a ...
Patrick Plitzner

06/08/2018

06:02 PM bug #7351 (Worksforme): LIE (LazyInitializationException) when opening SpecimenTypeDesignationWor...
This problem no longer occurs, it apparently has been solved meanwhile. Andreas Kohlbecker
05:57 PM feature request #7253 (Duplicate): TaxonNameEditor mode replaced synonym
Andreas Kohlbecker
05:57 PM feature request #7363 (Duplicate): TaxonNameEditor supports replaced synonyms
Andreas Kohlbecker
03:46 PM task #7364 (Resolved): TaxonNameEditor supports editing of a validated name
this is complete now an can be tested. Andreas Kohlbecker
03:30 PM task #7364: TaxonNameEditor supports editing of a validated name
Hallo Andreas,

anbei die fünf most-relevanten Codes (sind auch in EDIT):

Greuter, W.R., McNeill, J., Barrie, ...
Andreas Kohlbecker
03:23 PM task #7466 (New): Use makers to identify references for ICBN or other codes
1. Use the MarkerType NOMENCLATURAL_RELEVANT which has been prepared already
2. **cdmlib**: extend the `IIdentifiabl...
Andreas Kohlbecker
02:25 PM bug #7465 (New): adapt test to the change in move taxon operation
the test for moveTaxon in navigator needs to adapted to the fact that it is now a long running task and the result we... Katja Luther
12:13 PM feature request #7464 (Closed): make move Taxonnodes a longrunning task
moving a taxonnode is espacially for a set of nodes an expensive operation and therefore it should be a long running ... Katja Luther
12:11 PM feature request #7463: Move taxonnodes should be available for multiple selection
at the moment moving taxon node is only available for a single node, we should provide it also for a set of nodes. Katja Luther
12:10 PM feature request #7463 (Closed): Move taxonnodes should be available for multiple selection
Open issues:
* ~~Don't move (grand)child nodes of selected parents to the top level.~~
* Exception in #7463#not...
Katja Luther

06/07/2018

06:45 PM feature request #7461 (Feedback): Add oder by ISSN an ISBN to the PagingProvider for all Referenc...
Henning, can you please create journals with identical title and different issn and test if the sort oder is working? Andreas Kohlbecker
06:43 PM feature request #7461 (Resolved): Add oder by ISSN an ISBN to the PagingProvider for all Referenc...
Applied in changeset commit:cdm-vaadin|e32daf11e2a1d6947e525bb2e42e99f124e02b38. Andreas Kohlbecker
05:57 PM feature request #7461 (Closed): Add oder by ISSN an ISBN to the PagingProvider for all Reference ...
This has been intended as a quick solution to easily distinguish Journals with the same title (printed and digital is... Andreas Kohlbecker
06:05 PM feature request #7462 (Rejected): references in type footnotes are clickable links

In the DataPortal the bibliographic citation of typedesignations is shown in a footnote to the typedesignation.
...
Andreas Kohlbecker
05:53 PM feature request #7460 (New): Duplicate button for TypeDesignations in SpecimenTypeDesignationWork...
The button to duplicate type designations in SpecimenTypeDesignationWorkingsetEditor must only be available for ISOTYPE Andreas Kohlbecker
05:50 PM feature request #7459 (New): ToOneRelatedEntityCombobox for References allow searching also via I...
Journals sometime are published as digital issue an later on as printed issue. Both have the same title but different... Andreas Kohlbecker
05:44 PM feature request #7458 (Closed): Note field for TaxonName , NameType and SpecimenType editors
Submitters need to add notes the names and type designations they are entering.
There should be one note field onl...
Andreas Kohlbecker
04:50 PM bug #7453 (Closed): Registration Workingsets inconsistent for registrations for sections of publi...
Andreas Kohlbecker
02:48 PM bug #7453 (Resolved): Registration Workingsets inconsistent for registrations for sections of pub...
Applied in changeset commit:cdm-vaadin|a433cf9e6bc18b10bf621cc69a42bf8517998311. Andreas Kohlbecker
03:05 PM feature request #7457 (Closed): E+M: Allow filtering for only published in search
since #3560 it is now possible to search only for published taxa, synonyms, ...
We should allow this filter also i...
Andreas Müller
02:39 PM bug #7456 (Duplicate): E+M: NameFacts von ILDIS Daten
Im Portal werden derzeit NameFacts noch direkt hinter z.B. einem Namen/MAN angezeigt. Das führt bei den NameFacts zu ... Andreas Müller
01:24 PM task #7455: [Check] Check all markers for correctnes
some interesting queries:
~~~ sql
SELECT m.markerType_id, dtb.titleCache, count(*) as n
FROM Marker m
INNER JO...
Andreas Müller
01:21 PM task #7455 (Resolved): [Check] Check all markers for correctnes
Check if all existing markers are still up-to-date with the current E+M import strategy.
~~~
SELECT flag, dtb.t...
Andreas Müller
10:52 AM bug #7454 (New): illegal argument exception for name selection in details view
mail of WB:
beim Eingeben einer langen Liste von Synonymen über die Namensauswahl im Detail-View (die Namen stehen...
Katja Luther

06/06/2018

06:32 PM feature request #7010 (Resolved): Adapt handlers for multiple selection in e4 views
Adapted all handlers.
This is pretty cumbersome to review so feel free to test some context menus if you like and th...
Patrick Plitzner
05:52 PM bug #7453 (Closed): Registration Workingsets inconsistent for registrations for sections of publi...
Opening the Registration Workingset for a Registration which is associated with the Section only shows the Registrati... Andreas Kohlbecker
03:00 PM bug #7452 (Resolved): TitleCache is not correctly set for new Person
Fixed with commit:taxeditor|4b61c8bccb8ea366c1f4f4a49d3e75dff4bd096e Patrick Plitzner
03:00 PM bug #7452 (Closed): TitleCache is not correctly set for new Person
Steps to reproduce
- Open the PersonSelectionDialog e.g. for name authors
- Click on "New Person"
- Enter text ...
Patrick Plitzner

06/05/2018

05:54 PM bug #7451 (Resolved): ExternalLinks [ext-links]: update search urls
Applied in changeset commit:cdm-dataportal|522a5b8c5352339b2c9acf22392f6cb48773228d. Andreas Kohlbecker
05:19 PM bug #7451: ExternalLinks [ext-links]: update search urls
The "Search Fairchild Guide To Palms" no longer exists. Therefore I will remove this entry.
Andreas Kohlbecker
11:37 AM bug #7451 (Closed): ExternalLinks [ext-links]: update search urls
The search api of service providers used in the ext-links module have changes.
The module needs to be updated:
--...
Andreas Kohlbecker
09:53 AM feature request #7450: Allow setPublish for subtree to include misapplied names and pro parte syn...
AM:
bei der Suche müssen wir das evtl. noch im Detail definieren.
Mehrere Möglichkeiten gibt es :
1. Er kann...
Andreas Müller
09:28 AM feature request #7450: Allow setPublish for subtree to include misapplied names and pro parte syn...
Maybe we should think about to have a publish flag on the taxonrelationship to avoid influencing another classification? Katja Luther

06/04/2018

08:49 PM feature request #6659: Show mediaCreated in dataportal
This is finally fixed! Andreas Müller, please confirm. Andreas Kohlbecker
08:47 PM feature request #6659 (Resolved): Show mediaCreated in dataportal
Applied in changeset commit:cdm-dataportal|fc95035952cdea4802094a45c56ba635a372718a. Andreas Kohlbecker
06:54 PM bug #4307 (Feedback): User with permission group 'Editor' editor cannot create new authorteam via...
The UI issue is solved, buttons to create a new Person or Team is available now. But creating a new TeamOrPersonBase ... Andreas Kohlbecker
03:18 PM feature request #7335: Allow editing of pro parte and partial synonyms in the same way as misappl...
In details view please switch syn. sec. and sec., first comes sec. then syn. sec., be careful to also set the two "d... Andreas Müller
03:15 PM feature request #7335: Allow editing of pro parte and partial synonyms in the same way as misappl...
Andreas Müller wrote:
> In the second line in the name editor the syn. sec. is shown, not the sec., the later is mor...
Andreas Müller
02:01 PM feature request #7335 (Feedback): Allow editing of pro parte and partial synonyms in the same way...
In the second line in the name editor the syn. sec. is shown, not the sec., the later is more important and should de... Andreas Müller
03:09 PM feature request #7450 (Closed): Allow setPublish for subtree to include misapplied names and pro ...
... and maybe also some other taxa related via taxon concept relations.
Needs some discussion how to handle MANs a...
Andreas Müller
02:56 PM feature request #7417: Make pro parte and partial synonym relationships always visible in data po...
Other example uuids in Nepenthes: cdm_production_caryo_nepenthaceae
~~~ sql
SELECT acc.titleCache, acc.uuid, pp.t...
Andreas Müller
01:52 PM feature request #7417: Make pro parte and partial synonym relationships always visible in data po...
IN the attachement you find how currently the default configuration in ...portal/admin/config/cdm_dataportal/settings... Andreas Müller
01:10 PM feature request #5627: Display pro parte (and partial) information in data portal
Not sure if this is really a full duplicate as #7417 is only about showing or not showing pp relationship records at ... Andreas Müller
11:17 AM feature request #5627 (Duplicate): Display pro parte (and partial) information in data portal
this issue duplicates an newer ticket with a more up to date description: #7417 Andreas Kohlbecker
12:15 PM task #2925 (Worksforme): [DISCUSS]Do we need newly created objects for EntityCollectionSection
The createNewElement() is needed to show the new (empty) element in the details view. Patrick Plitzner
12:13 PM bug #7340 (Closed): OderedVocabularies are initialised with DefinedTerms
I tried creating a new term for the above mentioned vocabularies and everything worked fine. Patrick Plitzner
10:18 AM feature request #6321: Implement parallel loading + progress bar for loading objects into the bul...
I am currently using a page size of 20 which leads to a quicker refresh of the bulk editor. But of course this will p... Patrick Plitzner
10:13 AM feature request #6321 (Resolved): Implement parallel loading + progress bar for loading objects i...
Applied in changeset commit:taxeditor|27a07b9c1e7cf113214a020191f0629e15b38cd3. Patrick Plitzner
 

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