Activity
From 05/16/2018 to 06/14/2018
06/14/2018
- 10:41 PM feature request #1080: Model changes for references, taxonBase, OriginalSource
- remove version as it is misleading. Nothing changed really in 5.1, only a final decision was made.
- 03:43 PM feature request #1080 (Closed): Model changes for references, taxonBase, OriginalSource
- 03:41 PM feature request #1080: Model changes for references, taxonBase, OriginalSource
- As none of the freetext search functions is using this field for filtering we can remove the @IndexedEmbedded from `R...
- 10:22 PM feature request #7461: Add oder by ISSN an ISBN to the PagingProvider for all Reference comboboxes
- Doppelte Journals "Fotteea", "Hinter Indian Journal of Phycology" und Buch "Das Buch" werden jeweils fehlerfrei aufst...
- 12:10 PM feature request #7461 (Resolved): Add oder by ISSN an ISBN to the PagingProvider for all Reference comboboxes
- 09:33 PM bug #7476: RegistrationWorkingSetEditor: existing name combobox broken after saving a popup editor
- Tested, issue not fixed. 2018-06-14
- 07:00 PM bug #7476: RegistrationWorkingSetEditor: existing name combobox broken after saving a popup editor
- This issue is fixed. Please can you test and confirm?
- 06:59 PM bug #7476 (Resolved): RegistrationWorkingSetEditor: existing name combobox broken after saving a popup editor
- Applied in changeset commit:cdm-vaadin|b19b631ab1a1db7915e0ac4ac844c04a08e4b4ab.
- 05:32 PM bug #7476 (Closed): RegistrationWorkingSetEditor: existing name combobox broken after saving a popup editor
- After saving any popup editor the lookup mechanism of the existing name combobox no longer works.
This as reported... - 06:07 PM bug #7475: error when saving Reference editor with new empty Person in Team when OK or NEW was not pressed
- problem solved please review
- 06:05 PM bug #7475 (Resolved): error when saving Reference editor with new empty Person in Team when OK or NEW was not pressed
- Applied in changeset commit:cdm-vaadin|eded01b72d14bd68f23f53712c2c920a3134eaa3.
- 02:33 PM bug #7475 (Closed): error when saving Reference editor with new empty Person in Team when OK or NEW was not pressed
- ...Dazu wollte ich zunächst eine neue Referenz erstellen.
Neues Autorenteam mit einem neu erstellten Autor, hatte be... - 05:56 PM bug #7477: TeamOrPersonField: ToManyRelatedEntitiesListSelect blocks removing new entries
- Now additional entries can be be removed except of the last one. there must always at least one entry.
@Henning: p... - 05:54 PM bug #7477 (Resolved): TeamOrPersonField: ToManyRelatedEntitiesListSelect blocks removing new entries
- Applied in changeset commit:cdm-vaadin|06b79df2f504001e832078bd928212071f1226cc.
- 05:37 PM bug #7477 (Closed): TeamOrPersonField: ToManyRelatedEntitiesListSelect blocks removing new entries
- after adding a new entry the remove (-) button is disabled. Newly created Persons can not be removed.
![](picture... - 03:18 PM bug #7386: TaxonNamePopEditor: com.vaadin.data.Property$ReadOnlyException on saving a basionym
- I tried once again to reproduce this without success. Can you still reproduce the error?
- 03:17 PM bug #7386: TaxonNamePopEditor: com.vaadin.data.Property$ReadOnlyException on saving a basionym
- Henning wrote:
http://test.e-taxonomy.eu/cdmserver/phycobank/app/registration#!workingset/bd075280-f7ff-401b-83... - 03:12 PM bug #7327 (Duplicate): ReferencePopupEditor: multiple exceptions and problems during creation of a journal section
- Hallo Hening,
ich habe den Eindruck, dass sich dein letzter Kommentar auf eine Problematik mit dem nomenklatroris... - 01:31 PM bug #6276: Nomenclatural references show parsed date string instead of publication year
- [Henning wrote:]
Im Produktionssystem wird als Publikationsdatum ein deutsches Datum eingesetzt. Es gibt auch ein ... - 12:23 PM task #7466 (New): Use markers to identify references for ICBN or other codes
- 12:21 PM bug #5477 (Closed): lucene index not updated in all cases after Taxon.addMisappliedName
- Looks good and seems to work since the test is now running successfully.
- 12:19 PM bug #7451 (Closed): ExternalLinks [ext-links]: update search urls
- 12:08 PM task #7338 (Resolved): Validate taxon name against the higher taxon name
- @Henning This is now fully implemented. You can start testing this feature.
06/13/2018
- 06:08 PM bug #7467 (Closed): taxon name parts lookup method with support for wildcard searches
- 06:06 PM bug #7467 (Resolved): taxon name parts lookup method with support for wildcard searches
- Applied in changeset commit:cdmlib|9fc2a8a0de9a103ea0dbb1e9391000753b744ae2.
- 03:00 PM task #7474: Unify code base for moving taxon nodes
- to move several nodes was available, this was a merge problem, I will commit the fix of the regression
- 02:48 PM task #7474 (New): Unify code base for moving taxon nodes
- There are two ways to move taxon nodes:
* via drag and drop
* via context menu
They do not entirely use the sa... - 02:45 PM feature request #7422: Set nom. illeg as default in NomenclaturalStatusType ComboBox
- please review
- 02:44 PM feature request #7422 (Resolved): Set nom. illeg as default in NomenclaturalStatusType ComboBox
- Applied in changeset commit:taxeditor|0efab2895d93de6bf45d1375b7494fe2c96f33ac.
- 02:19 PM feature request #7473 (New): Replace PropertyChangeEvent architecture with e4 event bus in details view
- With the current architecture many redundant events are generated to refresh the details view. This can be optimized ...
- 02:09 PM feature request #7463 (Resolved): Move taxonnodes should be available for multiple selection
- please review
- 01:01 PM bug #7472: lazy loading exception for MAN with type specimen
- please review if everything is solved now.
- 01:00 PM bug #7472 (Resolved): lazy loading exception for MAN with type specimen
- Applied in changeset commit:taxeditor|26cc98f0fe93d159407c4ee093034ae1360b6755.
- 12:53 PM bug #7472 (Closed): lazy loading exception for MAN with type specimen
- mail WB:
bei N. sumatrana in der Flora Malesiana Concepts Klassifikation wollte ich das (falsche) p.p. Synonym Nep...
06/12/2018
- 09:58 PM bug #5477 (Resolved): lucene index not updated in all cases after Taxon.addMisappliedName
- Seems to be fixed with using @ContainedIn on relationsToThisTaxon and relationsfromThisTaxon.
Please review. - 06:34 PM bug #7471 (New): Invalid use of DefaultPager
- found a couple of wrong usages of the DefaultPagerImpl constructor in `NameServiceImpl`:
~~~java
DefaultPagerImpl... - 10:38 AM feature request #7470: Verbatim type designation information
- WGB:
das nochmal mit erweitertem Empfängerkreis. Katja, wie wird denn jetzt eigentlich die Type designation im CDM... - 10:29 AM feature request #7470: Verbatim type designation information
- WGB:
ein modernes Zitat: Nepenthes armin Jebb & Cheek:
“Type: Argent & Reynoso 8936 (holotype K; isotypes E, ... - 10:15 AM feature request #7470 (Closed): Verbatim type designation information
- WGB:
Es ist häufig notwendig, die Typus-Angabe aus dem Protolog verbatim zu zitieren, da die atomisierte Informati...
06/11/2018
- 06:50 PM bug #7469 (Closed): Updated script for individualCount column type in Postgres
- 06:49 PM bug #7469 (Resolved): Updated script for individualCount column type in Postgres
- Applied in changeset commit:cdmlib|e82fdff4901ef8a8f99fffb1460cb143cd770567.
- 06:19 PM bug #7469 (Closed): Updated script for individualCount column type in Postgres
- The ColumnTypeChanger in update script does not work as expected for Postgres.
It throws exceptions that the opera... - 06:20 PM bug #7468 (Closed): Updated script for mediaCreated does not work for PostGreSQL
- 03:36 PM bug #7468 (Resolved): Updated script for mediaCreated does not work for PostGreSQL
- Applied in changeset commit:cdmlib|870bdcfa2c6d2c6575ae87c56c9b9b2a17aa6745.
- 03:03 PM bug #7468 (Closed): Updated script for mediaCreated does not work for PostGreSQL
- In "Copy mediaCreated to new columns" the cast from timestamp to string does not work
- 04:57 PM bug #7418: remaining specimen determination details view issues
- Now, the element is resized after editing.
But I could not reproduce the scrolling bug. - 04:56 PM bug #7418 (Resolved): remaining specimen determination details view issues
- Applied in changeset commit:taxeditor|5e9ddd814e4727cce615ee85e7454060357fda3c.
- 04:08 PM bug #7467: taxon name parts lookup method with support for wildcard searches
- After discussing this with Andreas Müller we decided to create another more dedicated lookup method which won't load ...
- 01:27 PM bug #7467 (Closed): taxon name parts lookup method with support for wildcard searches
- implement a taxon name parts lookup method in the dao and service layer with support for wildcard searches.
If a n... - 12:35 PM bug #6296: Simple search for common names returns duplicates
- duplicates are no longer returned, so this issue can in principle be closed, however, as last step cleaning up commen...
- 12:24 PM feature request #4363 (Resolved): Show more informative message for unsupported specimen structures in specimen bulk editor
- I don't have a test DB where there is a DerivedUnit with multiple FieldUnits.
But I added the possibility to show a ...
06/08/2018
- 06:02 PM bug #7351 (Worksforme): LIE (LazyInitializationException) when opening SpecimenTypeDesignationWorkingsetEditor
- This problem no longer occurs, it apparently has been solved meanwhile.
- 05:57 PM feature request #7253 (Duplicate): TaxonNameEditor mode replaced synonym
- 05:57 PM feature request #7363 (Duplicate): TaxonNameEditor supports replaced synonyms
- 03:46 PM task #7364 (Resolved): TaxonNameEditor supports editing of a validated name
- this is complete now an can be tested.
- 03:30 PM task #7364: TaxonNameEditor supports editing of a validated name
- Hallo Andreas,
anbei die fünf most-relevanten Codes (sind auch in EDIT):
Greuter, W.R., McNeill, J., Barrie, ... - 03:23 PM task #7466 (New): Use markers to identify references for ICBN or other codes
- 1. Use the MarkerType NOMENCLATURAL_RELEVANT which has been prepared already
2. **cdmlib**: extend the `IIdentifiabl... - 02:25 PM bug #7465 (New): adapt test to the change in move taxon operation
- the test for moveTaxon in navigator needs to adapted to the fact that it is now a long running task and the result we...
- 12:13 PM feature request #7464 (Closed): make move Taxonnodes a longrunning task
- moving a taxonnode is espacially for a set of nodes an expensive operation and therefore it should be a long running ...
- 12:11 PM feature request #7463: Move taxonnodes should be available for multiple selection
- at the moment moving taxon node is only available for a single node, we should provide it also for a set of nodes.
- 12:10 PM feature request #7463 (Closed): Move taxonnodes should be available for multiple selection
- Open issues:
* ~~Don't move (grand)child nodes of selected parents to the top level.~~
* Exception in #7463#not...
06/07/2018
- 06:45 PM feature request #7461 (Feedback): Add oder by ISSN an ISBN to the PagingProvider for all Reference comboboxes
- Henning, can you please create journals with identical title and different issn and test if the sort oder is working?
- 06:43 PM feature request #7461 (Resolved): Add oder by ISSN an ISBN to the PagingProvider for all Reference comboboxes
- Applied in changeset commit:cdm-vaadin|e32daf11e2a1d6947e525bb2e42e99f124e02b38.
- 05:57 PM feature request #7461 (Closed): Add oder by ISSN an ISBN to the PagingProvider for all Reference comboboxes
- This has been intended as a quick solution to easily distinguish Journals with the same title (printed and digital is...
- 06:05 PM feature request #7462 (Rejected): references in type footnotes are clickable links
In the DataPortal the bibliographic citation of typedesignations is shown in a footnote to the typedesignation.
...- 05:53 PM feature request #7460 (New): Duplicate button for TypeDesignations in SpecimenTypeDesignationWorkingsetEditor
- A button for duplicating type designations is needed in the vaadin Registration-UI SpecimenTypeDesignationWorkingsetE...
- 05:50 PM feature request #7459 (New): ToOneRelatedEntityCombobox for References allow searching also via ISSN and ISBN
- Journals sometime are published as digital issue an later on as printed issue. Both have the same title but different...
- 05:44 PM feature request #7458 (Closed): Note field for TaxonName , NameType and SpecimenType editors
- Submitters need to add notes the names and type designations they are entering.
There should be one note field onl... - 04:50 PM bug #7453 (Closed): Registration Workingsets inconsistent for registrations for sections of publications
- 02:48 PM bug #7453 (Resolved): Registration Workingsets inconsistent for registrations for sections of publications
- Applied in changeset commit:cdm-vaadin|a433cf9e6bc18b10bf621cc69a42bf8517998311.
- 03:05 PM feature request #7457 (Closed): E+M: Allow filtering for only published in search
- since #3560 it is now possible to search only for published taxa, synonyms, ...
We should allow this filter also i... - 02:39 PM bug #7456 (Duplicate): E+M: NameFacts von ILDIS Daten
- Im Portal werden derzeit NameFacts noch direkt hinter z.B. einem Namen/MAN angezeigt. Das führt bei den NameFacts zu ...
- 01:24 PM task #7455: [Check] Check all markers for correctnes
- some interesting queries:
~~~ sql
SELECT m.markerType_id, dtb.titleCache, count(*) as n
FROM Marker m
INNER JO... - 01:21 PM task #7455 (Resolved): [Check] Check all markers for correctnes
- Check if all existing markers are still up-to-date with the current E+M import strategy.
~~~
SELECT flag, dtb.t... - 10:52 AM bug #7454 (New): illegal argument exception for name selection in details view
- mail of WB:
beim Eingeben einer langen Liste von Synonymen über die Namensauswahl im Detail-View (die Namen stehen...
06/06/2018
- 06:32 PM feature request #7010 (Resolved): Adapt handlers for multiple selection in e4 views
- Adapted all handlers.
This is pretty cumbersome to review so feel free to test some context menus if you like and th... - 05:52 PM bug #7453 (Closed): Registration Workingsets inconsistent for registrations for sections of publications
- Opening the Registration Workingset for a Registration which is associated with the Section only shows the Registrati...
- 03:00 PM bug #7452 (Resolved): TitleCache is not correctly set for new Person
- Fixed with commit:taxeditor|4b61c8bccb8ea366c1f4f4a49d3e75dff4bd096e
- 03:00 PM bug #7452 (Closed): TitleCache is not correctly set for new Person
- Steps to reproduce
- Open the PersonSelectionDialog e.g. for name authors
- Click on "New Person"
- Enter text ...
06/05/2018
- 05:54 PM bug #7451 (Resolved): ExternalLinks [ext-links]: update search urls
- Applied in changeset commit:cdm-dataportal|522a5b8c5352339b2c9acf22392f6cb48773228d.
- 05:19 PM bug #7451: ExternalLinks [ext-links]: update search urls
- The "Search Fairchild Guide To Palms" no longer exists. Therefore I will remove this entry.
- 11:37 AM bug #7451 (Closed): ExternalLinks [ext-links]: update search urls
- The search api of service providers used in the ext-links module have changes.
The module needs to be updated:
--... - 09:53 AM feature request #7450: Allow setPublish for subtree to include misapplied names and pro parte synonyms
- AM:
bei der Suche müssen wir das evtl. noch im Detail definieren.
Mehrere Möglichkeiten gibt es :
1. Er kann... - 09:28 AM feature request #7450: Allow setPublish for subtree to include misapplied names and pro parte synonyms
- Maybe we should think about to have a publish flag on the taxonrelationship to avoid influencing another classification?
06/04/2018
- 08:49 PM feature request #6659: Show mediaCreated in dataportal
- This is finally fixed! Andreas Müller, please confirm.
- 08:47 PM feature request #6659 (Resolved): Show mediaCreated in dataportal
- Applied in changeset commit:cdm-dataportal|fc95035952cdea4802094a45c56ba635a372718a.
- 06:54 PM bug #4307 (Feedback): User with permission group 'Editor' cannot create new authorteam via wizzard
- The UI issue is solved, buttons to create a new Person or Team is available now. But creating a new TeamOrPersonBase ...
- 03:18 PM feature request #7335: Allow editing of pro parte and partial synonyms in the same way as misapplied names in the NameEditor
- In details view please switch syn. sec. and sec., first comes sec. then syn. sec., be careful to also set the two "d...
- 03:15 PM feature request #7335: Allow editing of pro parte and partial synonyms in the same way as misapplied names in the NameEditor
- Andreas Müller wrote:
> In the second line in the name editor the syn. sec. is shown, not the sec., the later is mor... - 02:01 PM feature request #7335 (Feedback): Allow editing of pro parte and partial synonyms in the same way as misapplied names in the NameEditor
- In the second line in the name editor the syn. sec. is shown, not the sec., the later is more important and should de...
- 03:09 PM feature request #7450 (Closed): Allow setPublish for subtree to include misapplied names and pro parte synonyms
- ... and maybe also some other taxa related via taxon concept relations.
Needs some discussion how to handle MANs a... - 02:56 PM feature request #7417: Make pro parte and partial synonym relationships always visible in data portals
- Other example uuids in Nepenthes: cdm_production_caryo_nepenthaceae
~~~ sql
SELECT acc.titleCache, acc.uuid, pp.t... - 01:52 PM feature request #7417: Make pro parte and partial synonym relationships always visible in data portals
- IN the attachement you find how currently the default configuration in ...portal/admin/config/cdm_dataportal/settings...
- 01:10 PM feature request #5627: Display pro parte (and partial) information in data portal
- Not sure if this is really a full duplicate as #7417 is only about showing or not showing pp relationship records at ...
- 11:17 AM feature request #5627 (Duplicate): Display pro parte (and partial) information in data portal
- this issue duplicates an newer ticket with a more up to date description: #7417
- 12:15 PM task #2925 (Worksforme): [DISCUSS]Do we need newly created objects for EntityCollectionSection
- The createNewElement() is needed to show the new (empty) element in the details view.
- 12:13 PM bug #7340 (Closed): OderedVocabularies are initialised with DefinedTerms
- I tried creating a new term for the above mentioned vocabularies and everything worked fine.
- 10:18 AM feature request #6321: Implement parallel loading + progress bar for loading objects into the bulk editor
- I am currently using a page size of 20 which leads to a quicker refresh of the bulk editor. But of course this will p...
- 10:13 AM feature request #6321 (Resolved): Implement parallel loading + progress bar for loading objects into the bulk editor
- Applied in changeset commit:taxeditor|27a07b9c1e7cf113214a020191f0629e15b38cd3.
06/03/2018
- 10:42 PM bug #7447: ERS: Fix misapplied name issues for E+M common names.
- es gibt einige wenige Common Names, die im Zusammenhang mit einem Misapplied Name genannt werden, bei dem aber der Be...
- 10:33 PM bug #7447 (In Progress): ERS: Fix misapplied name issues for E+M common names.
- 07:04 PM bug #7447 (Resolved): ERS: Fix misapplied name issues for E+M common names.
- Fix misapplied name issues for E+M common names.
There are 2 issues:
1. BerlinModelCommonNamesImport:341 - Mis... - 10:02 PM bug #7449 (Resolved): E+M: Import common names with no regionFk correctly
- Currently it looks they are not imported at all as there is an iteration over the set of regions and for each region ...
- 08:35 PM task #7448 (New): Replace auct. reference
- Reference with refId = 5959 is an "auct." reference. It should be replaced where possible. Misapplied names automatic...
- 03:41 PM task #7446 (New): Check if all extensions are needed
- about 560.000 Extensions are currently imported.
We need to check if they are all needed or if some of them are d... - 12:20 PM bug #7340 (Resolved): OderedVocabularies are initialised with DefinedTerms
- By definition these terms and there vocabularies should not be ordered. The following attributes are all of type Defi...
- 12:13 PM bug #7445 (Resolved): Empty term uri and isoXXX fields should be null
- Applied in changeset commit:cdmlib|4dda23ea016633bd5b7282e9598aa3aa0eb47564.
- 12:09 PM bug #7445 (Closed): Empty term uri and isoXXX fields should be null
- Term URIs are currently loaded as empty strings, not as NULL by DefinedTermBase.readCsv. This should be changed. Also...
06/02/2018
- 01:14 PM task #3560 (In Progress): Withheld unpublished taxa from webservice used in E+M dataportal
- 01:12 PM feature request #6945 (Resolved): Allow flagging common names as recommended, synonym or unassessed
- 01:11 PM feature request #6945 (In Progress): Allow flagging common names as recommended, synonym or unassessed
- 12:50 PM task #7316 (Resolved): [E+M] Handle name relations correctly
- Applied in changeset commit:cdmlib-apps|09539dc4fba8474bb74c0d0f67fac92412e708f9.
05/30/2018
- 03:57 PM feature request #7439: Use NatTable for BulkEditor
- Katja Luther wrote:
> this works fine now
>
> maybe one minor issue: when set a multi selection as deduptlication... - 03:42 PM feature request #7439 (Feedback): Use NatTable for BulkEditor
- this works fine now
maybe one minor issue: when set a multi selection as deduplication candidate, the marker is no... - 03:15 PM feature request #7439 (Resolved): Use NatTable for BulkEditor
- 01:17 PM feature request #7439 (In Progress): Use NatTable for BulkEditor
- 12:43 PM feature request #7439: Use NatTable for BulkEditor
- the selection as candidate or target is not possible, the menu items are not enabled.
and the details view does not ... - 02:09 PM feature request #3984 (In Progress): Easier reference selection - recently used references
- 10:29 AM bug #6220: Improve definition of orphaned taxon and synonym
- Katja, can you please extract the open issues to a new ticket and close this one?
- 10:28 AM bug #4945: Right click menu for polytomous key node list view needs correct enabling
- is this still an open issue?
- 10:27 AM feature request #5972: Prevent user from unwanted author and reference updates
- I think this is fixed or mostly fixed. Can you please check and give me back for review if you think it is fixed?
- 10:25 AM feature request #6050: provide the possibility to choose the fields of the simple details view for names
- Can you have a look if these (functional and layout issues) can be easily fixed? If not please open a new ticket for ...
- 10:23 AM bug #6105: Make CdmPreferences editable in separate view
- Can we close this?
- 10:04 AM task #6135 (Closed): Remove authors from Taxonomische Großgruppe
- I expect this to be fixed. Reopen if not true after being tested by edapho crew.
- 10:03 AM bug #6072 (Closed): Implement getTaxonomicGroups for Edaphobase
- I expect this to be fixed. Reopen if not true after being tested by edapho crew.
- 07:48 AM feature request #6943 (Closed): Allow zoological in-Authors in taxon names
- 07:47 AM feature request #7443 (Closed): Implement in-authors in name parser and formatter for zoological and fungi names
- For now we implement it only for fungi and zoological names. Need to check first if it exists for botanical names, too.
05/29/2018
- 10:40 AM feature request #4101 (Resolved): Default value for publish bit of new taxa must be configurable via DB preferences
- this should be fixed now. please review.
05/28/2018
- 12:15 PM feature request #3984: Easier reference selection - recently used references
- Discussion: fast solution could be to always show the recent references in the selection dialog.
A more sophistic... - 11:50 AM feature request #7440 (Closed): E+M mark common name reference with according marker
- for further info see #7345
- 11:48 AM feature request #7345: [E+M] Common name references selectable in TaxEditor
- Decision for migration: We implement the marker solution.
- 11:44 AM bug #6973: Refreshing details and supplemental view
- Andreas Müller wrote:
> Seems to be fixed (though I still don' understand why the details and supplemental data view... - 11:40 AM feature request #7439 (Closed): Use NatTable for BulkEditor
- Use NatTable composite for displaying the information in the bulk editor instead of the current SWT table viewer.
... - 11:31 AM feature request #3989: [DISCUSS] Allow defining the vocabularies to be offered in the select dialogs
- For E+M common name areas, distribution areas and distribution status is important.
- 11:25 AM feature request #3989 (In Progress): [DISCUSS] Allow defining the vocabularies to be offered in the select dialogs
- 11:21 AM feature request #4101 (In Progress): Default value for publish bit of new taxa must be configurable via DB preferences
- 11:08 AM feature request #6659 (Feedback): Show mediaCreated in dataportal
- It doesn't seem to work yet.
05/26/2018
- 07:06 PM bug #7079 (Feedback): P2 updates not found
- It looks like nightly update does not work anymore in 5.1-Snapshot
- 07:01 PM bug #6973 (Closed): Refreshing details and supplemental view
- Seems to be fixed (though I still don' understand why the details and supplemental data view need to be white not gra...
- 06:47 PM task #6158 (Closed): Update EDIT documentation from svn to git
- Seems all to be fixed
05/25/2018
- 12:44 PM bug #4307: User with permission group 'Editor' cannot create new authorteam via wizzard
- is this still an open issue?
- 12:18 PM bug #3788: sort order of search results broken in free-text taxon search
- Please test if still an open issue
- 12:02 PM feature request #7438 (Closed): implement citation suggestion in dataportal
- 11:27 AM task #7435: Handle also published in correctly
- hier eine überarbeitete Version der Excel Datei mit einer 3. Tabelle, die einige Fälle enthält, bei denen im Detail N...
- 11:03 AM task #7435: Handle also published in correctly
- anbei eine Datei mit „also published in“ Informationen, die sich noch in Name Notes verstecken.
In der ersten Tabe... - 10:25 AM task #7435: Handle also published in correctly
- Hallo Eckhard,
in der angefügten Datei befinden sich alle Name Facts vom Type „also published in“. Sind nicht so v... - 10:04 AM task #7435: Handle also published in correctly
- Cleaned up Name.notes duplicates (1 exception send to ERS)
- 11:06 AM feature request #7437 (New): Handle also published in data portal
- implementation (and decision if necessary at all) depends on result of #7435
- 12:39 AM bug #6938 (In Progress): Tasks before a new Euro+Med import
05/24/2018
- 12:35 PM task #7436 (New): Handling verbatimDate in E+M import
- The verbatimDate is stored e.g. in RefDetails notes in different formats.
These need to be parsed (see also #7429)... - 10:58 AM task #7435 (In Progress): Handle also published in correctly
- Some names do have a second nomenclatural reference (or at least a second reference). This is usually handled as name...
05/23/2018
- 03:08 PM task #7407 (In Progress): [E+M] Remove synonym autonyms
- 03:06 PM task #7407: [E+M] Remove synonym autonyms
- AM: Im Anhang findest du die entsprechende Liste. Sie ist recht strikt, sollte also nur solche Fälle beinhalten, in d...
- 02:35 PM task #7407: [E+M] Remove synonym autonyms
- A strict SQL:
~~~ sql
SELECT n.FullNameCache, pt.StatusFk, pt.PTRefFk, pt.*, n.*
FROM PTaxon pt INNER JOIN Name ... - 02:20 PM feature request #7434 (New): while importing sequences it should be possible to download fasta file
- for the blast search we need fasta files of the sequences to create the BLAST DB. Therefore it should be possible to ...
- 02:15 PM feature request #7433 (New): new service method to get specimen by genetic AccessionNumber
- 12:36 PM feature request #7433 (Resolved): new service method to get specimen by genetic AccessionNumber
- Applied in changeset commit:cdmlib|f271620621cdd711088426b54e38849230129afc.
- 12:14 PM feature request #7433 (Resolved): new service method to get specimen by genetic AccessionNumber
- to get the specimen for a given genetic accession number (as result of blast search)
05/18/2018
- 03:14 PM feature request #6659 (Resolved): Show mediaCreated in dataportal
- set to resolved to do review
- 03:04 PM feature request #6574: Error Log view not available in Eclipse 4
- Yes, I move this to the current milestone
- 02:42 PM feature request #6574: Error Log view not available in Eclipse 4
- After we have decided to not fully migrate to e4 can we use e3 Log view again?
- 02:32 PM feature request #7432 (In Progress): Show default login only if the account has not been changed
- Copied from #4256:
Some time ago we discussed this issue and decided that the login dialog should mention the defa... - 02:28 PM bug #6241 (Feedback): fix java doc problems in projects
- We should discuss if it is really necessary to fix the broken links. I also took a quick look and it seems that in mo...
- 02:22 PM feature request #6932: Migrate bulk editor
- Multi selection is generally handled in #7010.
Are there any other open issues?
When closing *this* ticket plea... - 01:21 PM feature request #6932 (Feedback): Migrate bulk editor
- I think we should first create a ticket with the remaining issues before closing. Otherwise the information will get ...
- 02:19 PM feature request #6565 (Resolved): [MASTER] Eclipse 4 Migration
- 02:06 PM feature request #7431 (New): [MASTER] remaining E4 migration issues
- 01:53 PM feature request #7071 (Feedback): Reenable restore functionality
- Can you leave a note why this is rejected and who decided? Are there technical problems related?
- 01:45 PM feature request #6572 (Closed): Adapt/Add Wiki pages for e4 development
- I adjusted the text about the rcp target platform.
General information about e4 development can be better found onli... - 01:41 PM feature request #7015 (Feedback): Migrate recent menu item
- Can you leave a note why this is rejected and who decided? Are there technical problems related?
- 01:07 PM bug #7430 (Resolved): New team members should be added at the end of the member list
- Applied in changeset commit:taxeditor|82a57421606db7ee734704b0b0d79b1de30daa2d.
- 01:06 PM bug #7430 (Closed): New team members should be added at the end of the member list
- 12:13 PM bug #6220: Improve definition of orphaned taxon and synonym
- I don't understand why you moved this to the current milestone. The ticket is mostly fixed. The open issues are more ...
- 12:01 PM bug #6220: Improve definition of orphaned taxon and synonym
- moving to current milestone while closing #5616
- 12:02 PM feature request #5616 (Closed): Add the"Open in..." menu to taxon search
- 11:51 AM bug #3161 (Closed): Term Editors are no singletons
- works fine
- 11:45 AM feature request #4227 (Feedback): handle generated resources in eclipse workspace
- @Andreas K.: Could you test again if it is possible to delete the `.classpath` file from taxeditor.cdmlib and run "Up...
- 11:43 AM bug #7393 (Closed): Fix regressions resulting from cascade removal from relationships in TaxEditor
- Seems to work for me. I tested in name editor and bulk editor with new and existing taxa/names and got no exceptions ...
- 11:31 AM feature request #7421 (Closed): Implement verbatim date for references in TaxEditor
- Seems to work as expected. Maybe in future we can also unify VerbatimTimePeriodElement and TimePeriodElement. But thi...
- 10:57 AM feature request #7421: Implement verbatim date for references in TaxEditor
- In 291c69d6 I merged DateDetailsSection and VerbatimDetailsSection and replaced distinction by boolean value "include...
- 11:19 AM bug #4566 (Worksforme): check encoding for labels in DetailsView
- looks fine on linux as well
- 11:12 AM feature request #6752 (Closed): Add verbatimDate
- 10:08 AM feature request #7429 (Closed): Improve parsing and formatting for VerbatimTimePeriod
- In #6752 only very basic parsing and formatting functionality has been implemented for verbatimDate. Parsing supports...
- 09:52 AM feature request #7283: Improvements for alternative identifier search
- As this is important for E+M I moved it to 5.1
- 09:48 AM bug #2450: DateTime field - Old values do not get deleted if you enter a new value to the parse field
- We discussed and the wanted behavior is as it should be. Freetext field and parse field were mixed in the discussion.
- 09:47 AM bug #2450 (Closed): DateTime field - Old values do not get deleted if you enter a new value to the parse field
- 09:38 AM feature request #6800: Allow all filters for DwCA export in TaxEditor
- Katja Luther wrote:
> the subtree filter should be available now, please review. To filter on taxa, you have to clic... - 09:36 AM feature request #7193: Implement area filter and rank filter in TaxEditor for exports
- Sorry, I thought taxon node filter is also part of this ticket, but it isn't. Reverted last changes.
- 07:39 AM bug #5279: Deleting taxon node is slow in some cases
- we should have a look, if this is still an open issue.
05/17/2018
- 09:28 PM feature request #6394: Allow additional taxon relationships in TaxEditor to be handled similar to misapplications
- It is already possible to create pro parte synonyms, implementation for related taxa might be very similar
- 09:26 PM feature request #7421: Implement verbatim date for references in TaxEditor
- we may want to move the field up, below end date
- 10:21 AM feature request #7421 (Resolved): Implement verbatim date for references in TaxEditor
- 09:23 PM feature request #7422 (In Progress): Set nom. illeg as default in NomenclaturalStatusType ComboBox
- KL: Mmh, doch es wird eigentlich nom illeg ausgewählt und es hat auch funktioniert, aber gerade eben habe ich es auch...
- 09:16 PM feature request #7065 (Closed): When updating a subtree the affected and opened taxa are not updated in name editor this needs to be handled
- Copied open issues to new ticket.
- 03:57 PM feature request #7065: When updating a subtree the affected and opened taxa are not updated in name editor this needs to be handled
- remaining issue needs to be handled in next release
- 09:15 PM feature request #7428 (Closed): Open issues for updating open data while subtree is updated
- copied from #7065
* Open name editors are not checked for existing changes. When they are closed changes get lost.... - 05:43 PM feature request #5030 (Duplicate): Implement new dto object for TaxonNavigator
- 04:19 PM feature request #5030 (Closed): Implement new dto object for TaxonNavigator
- 02:28 PM feature request #5030 (Resolved): Implement new dto object for TaxonNavigator
- 05:35 PM feature request #5687: search for alternative identifiers
- Andreas Müller wrote:
> > In search result the alternative identifier and the titlecache of the reference should be ... - 03:58 PM feature request #5687 (Closed): search for alternative identifiers
- 04:34 PM feature request #7427 (Duplicate): Implement pro parte synonyms in TaxEditor
- 04:32 PM feature request #7427 (Duplicate): Implement pro parte synonyms in TaxEditor
- implement pro parte/partial synonyms in Editor. The details view should be similar to the misapplied name details view
- 04:29 PM feature request #7336 (Closed): Implement partial misapplied names in TaxEditor
- 11:55 AM feature request #7336 (Feedback): Implement partial misapplied names in TaxEditor
- This seems to be solved in 5.0 already. Can you please add changeset if possible and then close ticket.
- 04:28 PM bug #2450: DateTime field - Old values do not get deleted if you enter a new value to the parse field
- I think we should discuss whether this is not the wanted behaviour, because the atomised data are filled by the parse...
- 04:21 PM bug #7352: review propertyPaths in editor
- for synonyms we did it, but we have to review all propertypaths whether they get all informations or maybe too much.
- 02:23 PM bug #7352 (In Progress): review propertyPaths in editor
- I think we already started this
- 04:19 PM feature request #2380 (Closed): TaxonNavigator should work with DTO objects instead of full blown cdm instances
- 04:18 PM feature request #2380: TaxonNavigator should work with DTO objects instead of full blown cdm instances
- creating a new ticket for the two remaining issues -> #7426
- 04:18 PM bug #7426 (New): remaining issues of change of navigator to DTOs
- * using the classification selector for "Change accepted to synonym", etc. in the dialog changing the classification ...
- 04:05 PM feature request #3746 (Closed): Implement time period scope for description elements in TaxEditor
- only the space between the time period element and the element above is still open, so I close this ticket.
- 04:03 PM feature request #5616: Add the"Open in..." menu to taxon search
- I think the open questions are already in ticket #6220, so we can close this ticket.
- 12:29 PM feature request #5616: Add the"Open in..." menu to taxon search
- Can we move the open questions to a new ticket and close this ticket and move it back to the original milestone?
- 03:56 PM bug #7227: New name bulk editor shows all menu entries
- the last menu items come from a not emptied details view. we have to fix this.
- 02:17 PM feature request #7244 (Resolved): DistributionStatus editor help
- 11:51 AM feature request #7335 (Resolved): Allow editing of pro parte and partial synonyms in the same way as misapplied names in the NameEditor
- 09:43 AM task #7425 (Resolved): Implement VerbatimTimeField for cdm-vaadin and use this in the ReferencePopupEditor
- Applied in changeset commit:cdm-vaadin|82522760c827a846568139a38523c2dc91d3f98a.
05/16/2018
- 07:51 PM task #7425 (Closed): Implement VerbatimTimeField for cdm-vaadin and use this in the ReferencePopupEditor
- create a common base class for VerbatimTimeField and TimePeriodField
- 03:17 PM bug #7379 (Closed): right click menu of accepted taxa should not show "change to"
- Andreas Müller wrote:
> The menu entry seems to be correct now.
>
> However, it often happens that the menu entry... - 03:16 PM bug #7424 (Closed): right click menu does not show up in name editor
- after some operations the right click menu of the accepted taxon does not show up anymore.
for example after delet... - 03:13 PM feature request #7411 (Closed): adapt mediaCreated in taxeditor to timePeriod
- create a new ticket for refactoring the timePeriod element -> #7423
- 12:06 PM feature request #7411 (Feedback): adapt mediaCreated in taxeditor to timePeriod
- Works fine.
Online the time part is not yet shown. Feel free to create a new ticket for handling time. - 10:44 AM feature request #7411 (Resolved): adapt mediaCreated in taxeditor to timePeriod
- 03:13 PM feature request #7423 (New): refactore the time period element
- the time period element needs to be refactored.
* the labels of the dates should be above the dates and only ones
... - 02:38 PM feature request #6672 (Closed): Migrate status line
- The E4 migration has been done up to a sufficient state.
The migration of the status bar would only make sense if ... - 02:35 PM feature request #6932 (Closed): Migrate bulk editor
- The E4 migration has been done up to a sufficient state.
Remaining issues should be handled in separate tickets. - 02:31 PM feature request #6595 (Closed): Migrate name editor
- The E4 migration has been done up to a sufficient state.
Remaining issues should be handled in separate tickets. - 02:29 PM feature request #6902 (Closed): Migrate molecular module
- The E4 migration has been done up to a sufficient state.
- 02:15 PM feature request #7007 (Rejected): Migrate IMemento functionality
- The E4 migration has been done up to a sufficient state.
This feature was not migrated.
This may be re-visited in #... - 02:14 PM feature request #7071 (Rejected): Reenable restore functionality
- The E4 migration has been done up to a sufficient state.
This feature was not migrated.
This may be re-visited in #... - 02:13 PM feature request #7267 (Rejected): Migrate about dialog
- The E4 migration has been done up to a sufficient state.
This feature was not migrated. - 02:13 PM feature request #7043 (Rejected): Migrate validation view
- The E4 migration has been done up to a sufficient state.
This feature was not migrated. - 02:12 PM feature request #7015 (Rejected): Migrate recent menu item
- The E4 migration has been done up to a sufficient state.
This feature was not migrated. - 02:12 PM feature request #6925 (Closed): Migrate general framework
- The E4 migration has been done up to a sufficient state.
- 02:10 PM feature request #6568 (Closed): Migrate perspectives
- I close this ticket as this only occurs in rare cases and it is not critical if other perspectives are shown. The gen...
- 12:18 PM feature request #6568: Migrate perspectives
- Deleting .cdmLibrary solved the problem. Deleting workbench.xmi in installation folder did not. workbench.xmi in home...
- 09:42 AM feature request #6568: Migrate perspectives
- @AM: or could you do a search for `workbench.xmi` in your installation folder and in your home folder. It seems like ...
- 08:05 AM feature request #6568: Migrate perspectives
- Andreas Müller wrote:
> Patrick Plitzner wrote:
> > Andreas Müller wrote:
> > > For me the perspective selector do... - 02:01 PM bug #3161 (Resolved): Term Editors are no singletons
- Applied in changeset commit:taxeditor|2dc06490af06f288639d5c95c409782802edad25.
- 12:36 PM feature request #7422 (Closed): Set nom. illeg as default in NomenclaturalStatusType ComboBox
- for botanical names the default status type should be nom. illeg because it is the most used type.
- 12:31 PM feature request #6659 (In Progress): Show mediaCreated in dataportal
- implemented but seems not to be working as expected. I have no time to do further testing.
- 12:10 PM bug #6973 (Resolved): Refreshing details and supplemental view
- 11:33 AM task #7325 (Closed): Taxeditor uses CdmTransientEntityCacher from cdmlib-cache
- looks ok now!
- 10:40 AM feature request #7118 (Closed): migrate selection dialogs
- Katja Luther wrote:
> Pfeiltasten funktionieren noch nicht so wie beim alten Dialog, d.h. wenn ich Pfeil nach unten ... - 10:38 AM feature request #7119 (Closed): implement filter button for selection dialogs
- 10:37 AM bug #7393: Fix regressions resulting from cascade removal from relationships in TaxEditor
- please review, please also check in bulk editors
- 12:59 AM feature request #7421 (Closed): Implement verbatim date for references in TaxEditor
Also available in: Atom