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From 03/21/2018 to 04/19/2018

04/19/2018

06:44 PM task #7356 (In Progress): setup selenium test suite for cdm-vaadin
Andreas Kohlbecker
06:23 PM task #7356 (In Progress): setup selenium test suite for cdm-vaadin
The primary option to setup a test suite for testing the cdm-vaadin UIs is to use the **Vaadin Test Bench**. Even if ... Andreas Kohlbecker
04:23 PM Revision 62a46745 (taxeditor): ref #6429: add publish flag preference to admin menu
Katja Luther
04:21 PM Revision d947a5be (cdm-vaadin): selecting newly created basionym in taxon name editor
Andreas Kohlbecker
04:17 PM Revision 59246837 (taxeditor): ref #6429: add publish flag preference to admin menu
Katja Luther
04:08 PM Revision 969acec9 (cdm-vaadin): selecting newly created collection in collection editor
Andreas Kohlbecker
04:05 PM Revision 29713b34 (cdm-vaadin): selecting newly created collection and reference in specimen type designation workingset editor
Andreas Kohlbecker
04:05 PM Revision 670c75f5 (cdm-vaadin): selecting newly created name nameTypeEditor
Andreas Kohlbecker
03:30 PM Revision 2c89337b (taxeditor): ref #6429: missed to commit the new classes in last commit
Katja Luther
03:14 PM Revision 2952d237 (cdm-vaadin): ref #7355 avoiding unneccesary lazy select reload
Andreas Kohlbecker
03:07 PM Revision cdbf50c2 (cdm-vaadin): avoiding LIE
Andreas Kohlbecker
02:41 PM task #7355 (Resolved): TaxonNamePopupEditor: newly created nomenclatural reference should be selected immediately
Applied in changeset commit:cdm-vaadin|ec3938a6cf135cb6f01617c6a6c014192086ff88. Andreas Kohlbecker
02:37 PM task #7355 (Closed): TaxonNamePopupEditor: newly created nomenclatural reference should be selected immediately
The TaxonNamePopupEditor allows to create new nomenclatural references via the nomenclatural reference field.
After ...
Andreas Kohlbecker
02:41 PM Revision ec3938a6 (cdm-vaadin): fix #7355 selecting newly created nomenclatural reference
Andreas Kohlbecker
02:23 PM Revision 1a22bd3d (cdmlib): fix #7354 reducing log level
Andreas Kohlbecker
02:21 PM bug #7354 (Resolved): DerivedUnitConverter handles associated SpecimenTypeDesignation correctly
Applied in changeset commit:cdmlib|940e93a138cb1003aa0366647204aee36758cba5. Andreas Kohlbecker
02:07 PM bug #7354 (Closed): DerivedUnitConverter handles associated SpecimenTypeDesignation correctly
DerivedUnitConverter completely ignores the fact that a DerivedUnit can be associated with multiple or none SpecimenT... Andreas Kohlbecker
02:20 PM bug #7353 (Resolved): SpecimenTypedesignationsWorkingsetEditor: error on saving after changing kindOfUnit
Applied in changeset commit:cdm-vaadin|3baf176789a2471e9174a095357ed78cb690c3d5. Andreas Kohlbecker
02:02 PM bug #7353 (Closed): SpecimenTypedesignationsWorkingsetEditor: error on saving after changing kindOfUnit
Changing the kindOfUnit from can cause the situation in which an already existing DerivedUnit is to be persistet twic... Andreas Kohlbecker
02:20 PM Revision 3baf1767 (cdm-vaadin): fix #7353 SpecimenTypedesignationsWorkingsetEditor: adapting to changes in DerivedUnitConverter and blockig kindOfUnit changes in case of multiple typeDesignations per specimen
Andreas Kohlbecker
02:15 PM Revision 940e93a1 (cdmlib): fix #7354 DerivedUnitConverter handled typeDesignations correctly and abstains from persising anything
Andreas Kohlbecker
02:12 PM Revision 161620f9 (cdmlib): whitespace
Andreas Kohlbecker
02:12 PM Revision 2f54f726 (cdmlib): removing non java doc method comment
Andreas Kohlbecker
01:36 PM Revision 3f7d14c1 (taxeditor): ref #6429: adapt biocase provider preference page
Katja Luther
10:26 AM Revision a8de83de (taxeditor): ref #6429: smaller changes in admin preferences
Katja Luther

04/18/2018

05:56 PM Revision fdc04187 (taxeditor): ref #7095 Re-load specimen description to avoid multi rep exception
Patrick Plitzner
04:08 PM Revision 921ff608 (taxeditor): ref #7095 Correctly save RowWrapperDTO
Patrick Plitzner
03:22 PM Revision f665e780 (taxeditor): ref #6429: adapt admin preferences to other preferences
Katja Luther
03:17 PM Revision b2765124 (taxeditor): ref #7352: adapt property path for synonyms and taxon relations
Katja Luther
03:14 PM bug #7352 (Closed): review propertyPaths in editor
the propertyPaths in editor are not updated for all model changes therefore the objects are not correctly loaded and ... Katja Luther
02:35 PM Revision d56cc92c (cdmlib): Remove unused occurrence service method (2)
Patrick Plitzner
02:16 PM Revision bd45d1fc (cdmlib): Remove unused occurrence service method
Patrick Plitzner
10:45 AM bug #7351 (Worksforme): LIE (LazyInitializationException) when opening SpecimenTypeDesignationWorkingsetEditor

http://test.e-taxonomy.eu/cdmserver/phycobank/app/registration#!workingset/55acea03-f39a-4ee1-aa47-a7c8b272712c
...
Andreas Kohlbecker
10:26 AM Revision b8412039 (cdmlib): ref #7095 Fix NPE in specimen selection dialog
Patrick Plitzner
09:10 AM Revision 42002c0a (cdmlib): ref #7095 Add property paths to some methods
Patrick Plitzner
09:08 AM Revision 6dfca4b2 (taxeditor): ref #7095 Load description remotely
Patrick Plitzner
08:12 AM Revision c5066c73 (taxeditor): remove unused classes
Patrick Plitzner
06:43 AM Revision 07968816 (taxeditor): ref #7095 re-enable multi select in specimen selection dialog
Patrick Plitzner
06:33 AM Revision 7710d1ab (taxeditor): ref #7095 Add progress monitor to working set service (unstable)
Patrick Plitzner
06:33 AM Revision f852bff0 (cdmlib): ref #7095 Add progress monitor to working set service (unstable)
Patrick Plitzner

04/17/2018

03:02 PM Revision f5f64287 (taxeditor): ref #7095 Move specimen and description loading to service layer
Patrick Plitzner
02:55 PM Revision fad21775 (cdmlib): ref #7095 Move specimen and description loading to service layer
Patrick Plitzner
11:34 AM Revision 43e1b1e0 (cdm-vaadin): enabling EntityCacheDebugger for all AbstractPopupViews
Andreas Kohlbecker
10:09 AM Revision 5915a355 (cdm-vaadin): avoiding LIE in SpecimenTypeDesignationWorkingsetEditorPresenter collectors field and externatlizing init stratiegies
Andreas Kohlbecker
09:38 AM Revision 32c67f95 (cdm-vaadin): NPE fix
Andreas Kohlbecker
09:37 AM Revision 1b30495e (cdm-vaadin): TaxonNameEditor: avoiding LIE in authorship fields
Andreas Kohlbecker
09:36 AM Revision 11493d8f (cdm-vaadin): TextFieldNFix trim empty string to null
Andreas Kohlbecker

04/16/2018

05:04 PM bug #7350: Collection date is not being saved
done! Please review. Andreas Kohlbecker
05:03 PM bug #7350 (Resolved): Collection date is not being saved
Applied in changeset commit:cdm-vaadin|3b4bcfb52e1aa9f8f673d85ff1aee25aa81cc3cb. Andreas Kohlbecker
04:39 PM bug #7350 (Closed): Collection date is not being saved

Specimen typedesignations editor

Collection date, in das Feld Start „2018-01-01“ eingegeben, gespeichert, R...
Andreas Kohlbecker
05:03 PM Revision 3b4bcfb5 (cdm-vaadin): fix #7350 fixing GatheringDate set method & fixing field type
Andreas Kohlbecker
04:10 PM Revision 6d1cd5a2 (taxeditor): ref #7095 Add cancel option for specimen description loading
Patrick Plitzner
04:10 PM Revision b9c29d7a (taxeditor): ref #7095 Fix monitor information for description loading job
Patrick Plitzner
04:10 PM Revision d01cd7ac (taxeditor): ref #7095 Fix WS property path
Patrick Plitzner
04:10 PM Revision 4f6b8e6e (taxeditor): ref #7095 Adding monitor information for description loading job
Patrick Plitzner
02:27 PM Revision 6e43b539 (taxeditor): adapt label of new button of collection selection dialog
Katja Luther
02:24 PM Revision 93b32455 (taxeditor): fix selection of taxon of misappliedName relationship for supplemental data view
Katja Luther
02:24 PM Revision 4c154cfa (taxeditor): name selection for supplemental data view
Katja Luther
10:29 AM Revision 6e4d44c5 (taxeditor): ref #7095 Fix imported libraries
Patrick Plitzner
09:18 AM Revision fb4c53d2 (taxeditor): ref #7095 Added more paths to property path loading
- removed deproxying in some cases Patrick Plitzner
08:49 AM Revision 6ead69e0 (taxeditor): ref #7095 Remove unused specimen generator class
Patrick Plitzner
08:48 AM Revision 353f7dda (taxeditor): ref #7095 Increase performance of specimen selection dialog
- loading with property path
- pre-caching of taxon node label
Patrick Plitzner

04/13/2018

06:29 PM bug #7349 (Closed): RegistrationPopupEditor fails saving new References with new Team with 2 new memers
Andreas Kohlbecker
06:29 PM bug #7349: RegistrationPopupEditor fails saving new References with new Team with 2 new memers
This was a quite strange bug.
As long as the new person objects where set as value to the lazy select the contact ...
Andreas Kohlbecker
06:25 PM bug #7349 (In Progress): RegistrationPopupEditor fails saving new References with new Team with 2 new memers
Andreas Kohlbecker
06:25 PM bug #7349 (Closed): RegistrationPopupEditor fails saving new References with new Team with 2 new memers

habe den Eindruck, dass es wieder an dem neuen Team von 2 neuen Autoren liegt.
![](picture810-1.png)
~~~
...
Andreas Kohlbecker
06:27 PM Revision 0ce0edd2 (cdm-vaadin): ref #7349 prevent from setting nbew persons as value to person select - fixes problem with person fields being mixed up
Andreas Kohlbecker
04:12 PM Revision 12f80804 (cdm-vaadin): #7231 fixing bug in EntityCacheDebugger
Andreas Kohlbecker
02:02 PM task #6753: Edaphobase data issues before import
Synonym relationships with deleted taxa
~~~ sql
SELECT
sr.tax_synonym_id, sr.deleted, a.taxon_id, a.valid, a....
Andreas Müller

04/12/2018

04:41 PM Revision c0918c7c (taxeditor): ref #7095 Refactor RowWrapper
Patrick Plitzner
04:41 PM Revision c4010fc2 (taxeditor): ref #7095 Fill matrix asynchronously
Patrick Plitzner
09:22 AM Revision 28b6d887 (taxeditor): fix NPE for drag&drop in factual data view
Katja Luther
09:03 AM Revision 46d40a62 (taxeditor): ref #7095 some UI enhancements
Patrick Plitzner
08:40 AM Revision 71ef005a (taxeditor): ref #7095 Add text filter to specimen selection dialog
Patrick Plitzner

04/11/2018

04:55 PM Revision d343852d (cdm-vaadin): ref #7348 moving RegistrationDTO related classes from cdm-vaadin to cdmlib-services
Andreas Kohlbecker
04:55 PM Revision 6d6d19d1 (cdm-vaadin): ref #7348 moving RegistrationDTO related classes into cdmlib-services conformant packages
Andreas Kohlbecker
04:55 PM Revision 0844524a (cdm-vaadin): switching vom id based to uuid based ui navigation and entity references
Andreas Kohlbecker
04:53 PM Revision 6e858cb7 (cdmlib): ref #7348 moving RegistrationDTO related classes from cdm-vaadin to cdmlib-services
Andreas Kohlbecker
03:18 PM feature request #7348 (Closed): RegistrationDTO webservices implemented

The webservices exposing `RegistrationsDTO`s must not expose `Registration`s to unauthenticated users which are not...
Andreas Kohlbecker
02:22 PM Revision 835c1454 (taxeditor): ref #7095 Fix label representation for taxon combo
Patrick Plitzner
02:21 PM Revision 0df7b52d (taxeditor): ref #7095 Show tabular info in specimen selection dialog
Patrick Plitzner
11:56 AM Revision 80a0c0dc (taxeditor): ref #7086 Fix potential multiple representation exception
Patrick Plitzner
09:51 AM Revision ef79b4ff (cdmlib): ref #7086 Add getter for structure and property
Patrick Plitzner
09:39 AM Revision 3fe2a4b6 (taxeditor): ref #7095 Sort feature columns according to FeatureTree
Patrick Plitzner
09:13 AM Revision 081d99b4 (taxeditor): ref #7086 Add property and label to character details view
Patrick Plitzner
07:50 AM task #7269: Use redmine as message hub for submitter curator communication
Applied in changeset commit:taxeditor|2ccbcf35e9e8b9cdd92c8c289cfe7f715ca047c7. Patrick Plitzner
07:50 AM Revision 2ccbcf35 (taxeditor): fix #7269 Add missing redmine dependency to taxeditor.cdmlib
Patrick Plitzner
07:48 AM Revision 5cea1626 (taxeditor): ref #7095 Implement generic abstract combo class
Patrick Plitzner
07:48 AM Revision 09b45523 (taxeditor): ref #7095 Add taxon filter combo to specimen selection dialog
Patrick Plitzner
07:48 AM Revision de5b7791 (taxeditor): ref #7086 Thin out character details view
Patrick Plitzner

04/10/2018

04:31 PM Revision 1245cdd8 (taxeditor): ref #7095 Change taxon column cell text depending on tree/list view
Patrick Plitzner
03:51 PM Revision 7029881a (taxeditor): ref #7095 Change taxon column label
Patrick Plitzner
02:09 PM Revision 88b5520d (cdm-vaadin): ref #7101 fixed bug related to uppercase column names and refactored
Fabian Reimeier
01:56 PM bug #7101 (In Progress): StatusPresenterTest broken
Fabian Reimeier
01:49 PM Revision 0ac7ad4a (cdm-vaadin): ref #7101 using uppercase column names to fix HSQLDB tests and enabled testSynonyms test
Fabian Reimeier
01:42 PM Revision abcff2a8 (cdm-vaadin): ref #7101 fixed testLoadTaxa test
Fabian Reimeier
12:12 PM Revision 6d6b201f (cdm-dataportal): ref #7347 introducing DataPortalContextProviders, DataPortalsListContextProvider reads config from system property 'SiteListUrl'
Andreas Kohlbecker
09:05 AM Revision 619e9df3 (cdm-dataportal): ref #7347 refacoring of the dataportal test suite for more flexibility
Andreas Kohlbecker
08:45 AM Revision fadab744 (cdm-dataportal): ref #7347 refacoring of the dataportal test suite for more flexibility
Andreas Kohlbecker
08:44 AM task #7347 (New): Generic test suite to monitor multiple dataportals
This test suite will generically test common functionality on multiple dataportal installations
* Base the test ...
Andreas Kohlbecker

04/09/2018

04:31 PM Revision e5e64d18 (cdm-vaadin): ref #7344 updating presenter entity caches with beans modified in popup editors and refreshing teamOrPerson Fields (2)
- adding entity as field to EntityChangeEvent
- replacing all onDoneWithEditor listener methods by according onEnti...
Andreas Kohlbecker
04:30 PM Revision d80468ec (taxeditor): ref #7095 Disable summary for supplemental columns
Patrick Plitzner
03:08 PM Revision 8593f7ea (cdm-vaadin): fixing missing typifiedNameRef in case of existing reg with name
Andreas Kohlbecker
11:39 AM Revision 8dcaccaf (taxeditor): ref #7095 Fix summary for CategoricalData
Patrick Plitzner
11:34 AM bug #7344 (Resolved): TaxonNamesEditor to fill authorship fields automatically if nomref and basionym are set?
Henning, this issue should be fully solved now, and you are welcome to review this ticket. Andreas Kohlbecker
11:32 AM Revision 13d24007 (cdm-vaadin): ref #7344 updating presenter entity caches with beans modified in popup editors and refreshing teamOrPerson Fields
Andreas Kohlbecker

04/06/2018

11:36 PM bug #3804 (Resolved): E+M import Person titles contain Object.toSting() representations
Seems to be fixed. Only remaining AgentBase with title Person#ID<UUID> is now BM AuthorID 3330, which really has no d... Andreas Müller
05:25 PM task #7341 (In Progress): [Check] CommonName import issues
Andreas Müller
05:24 PM task #7346 (Closed): [CHECK] Use separate area vocabulary for common names
Currently we try to map common name areas to tdwg and country vocabularies.
Experience has shown that it is better t...
Andreas Müller
05:05 PM bug #7344 (In Progress): TaxonNamesEditor to fill authorship fields automatically if nomref and basionym are set?
Andreas Kohlbecker
04:24 PM Revision 810e8605 (cdm-vaadin): ref #7344 inferring authorship from the editor fields, reducing calls to updateAuthorshipFields(), fixing valueChange event handling
Andreas Kohlbecker
01:46 PM Revision e90e4ec3 (cdm-vaadin): ref #7344 new TaxonNameEditor mode to allow autofilling of name authorship fields
Andreas Kohlbecker
12:12 PM task #7039: Remove Hacks for RL 2017 from Distribution Editor
I made some preparations for removing the hacks and retrieving the uneditable areas from preferences.
@Andreas Mülle...
Fabian Reimeier
12:01 PM task #7039 (In Progress): Remove Hacks for RL 2017 from Distribution Editor
Fabian Reimeier
12:00 PM Revision c92b53a5 (cdm-vaadin): ref #7039 made preparations to retrieve uneditable areas from preferences
Fabian Reimeier
11:15 AM Revision eed6b243 (cdm-vaadin): refactoring
Fabian Reimeier
10:49 AM Revision 19eaf51a (cdm-vaadin): ref #6903 removed unused TermCacher
Fabian Reimeier

04/05/2018

07:01 PM feature request #7345 (Closed): [E+M] Common name references selectable in TaxEditor
In Euro+Med Berlin Model references for common names are handled separately from other references but do link to them... Andreas Müller
04:48 PM bug #7344 (Closed): TaxonNamesEditor to fill authorship fields automatically if nomref and basionym are set?
We misunderstood how the authorship fields in the TaxonName are used by the cdm library. In contrast to the current i... Andreas Kohlbecker
04:28 PM task #7343: PersonField allows editing the nomenclaturalTitle
please review Andreas Kohlbecker
04:27 PM task #7343 (Resolved): PersonField allows editing the nomenclaturalTitle
Applied in changeset commit:cdm-vaadin|adad0cac1264f1e303f63a453933e1488c773457. Andreas Kohlbecker
04:24 PM task #7343 (Closed): PersonField allows editing the nomenclaturalTitle
add a TextField for the `Person.nomenclaturalTitle` to the `PersonField` and keep the UI compact at the same time Andreas Kohlbecker
04:27 PM Revision adad0cac (cdm-vaadin): fix #7343 addind expanable field for the nomenclaturalTitle of Person
Andreas Kohlbecker
04:27 PM Revision b32928ec (cdm-vaadin): avoiding null captions
Andreas Kohlbecker
11:46 AM bug #7342: incomplete bean initialization with specific data causes LIEs
ich habe den cdm-server heute morgen um 2018-04-05 08:51:14 neu gestartet, weil der swap-space wieder mal sehr stark... Andreas Kohlbecker
10:51 AM feature request #7244: DistributionStatus editor help
Added help-window for the distribution editor.
@Andreas Müller Please review if the documentation is sufficient.
Fabian Reimeier
10:51 AM bug #7241 (Closed): Missing rights are not correctly indicated in Vaadin distribution editor - flexible vaadin errorhandler is needed
Andreas Kohlbecker
10:42 AM bug #7241: Missing rights are not correctly indicated in Vaadin distribution editor - flexible vaadin errorhandler is needed
Andreas Kohlbecker wrote:
> I modified the DelegatingErrorHandler and ErrorTypeHandler a bit in order to allow using...
Fabian Reimeier
10:39 AM Revision c7605112 (cdm-vaadin): ref #7241 modifications to use generic DelegatingErrorHandler
Fabian Reimeier

04/04/2018

05:23 PM task #7341: [Check] CommonName import issues
Find commonNames or facts attached to orphaned taxa:
~~~sql
SELECT n.fullNameCache, pt.PTNameFk, pt.PTRefFk, coun...
Andreas Müller
02:32 PM bug #7342: incomplete bean initialization with specific data causes LIEs
for example portal/classification/b010c84d-6049-45f4-9f13-c065101eaa26/childNodesOf/a7d542c5-1ae2-4edd-9f46-445b9b7f6... Katja Luther
02:23 PM bug #7342 (Worksforme): incomplete bean initialization with specific data causes LIEs
this has been observed at the salvador portal where a lot of functionality is broken due to `LazyInitializationExcept... Katja Luther
08:40 AM feature request #6812: Improve TaxEditor download site
[a.mueller:]
... Ich wollte nur darauf hinweisen, dass das mit dem automatischen Verschieben noch nicht klappt ...
Andreas Kohlbecker

04/03/2018

12:36 PM task #7341 (Resolved): [Check] CommonName import issues
Run script to create common names from facts: #6938
There are some issues with common name import for E+M:
* C...
Andreas Müller

03/30/2018

11:48 AM Revision 23336874 (cdmlib-apps): cleanup BM import
Andreas Müller

03/29/2018

01:39 PM bug #7340 (Closed): OderedVocabularies are initialised with DefinedTerms
In Campanula production I tried adding a new term for all term vocabularies.
This fails for OrderTermVocabularies be...
Patrick Plitzner
10:58 AM task #7339 (Closed): activate clickable links for references in Phycobank Dataportal
Projektanforderung: Anzeigemöglichkeit der kompletten Referenz auch bei Namensregistrierungen.
**Lösung:** Referen...
Andreas Kohlbecker

03/28/2018

09:50 PM Revision ff5a67fc (cdmlib): minor
Andreas Müller
08:03 PM Revision eefe8728 (cdmlib): fix failing clone tests
Andreas Müller
05:20 PM bug #7337 (Closed): creating of new NameTypeDesignation for empty registration ends up without typified name
Andreas Kohlbecker
04:28 PM bug #7337: creating of new NameTypeDesignation for empty registration ends up without typified name
If this solves the problem without producing duplicates, fine. Wolf-Henning Kusber
04:23 PM bug #7337: creating of new NameTypeDesignation for empty registration ends up without typified name
please review Andreas Kohlbecker
04:23 PM bug #7337 (Resolved): creating of new NameTypeDesignation for empty registration ends up without typified name
Applied in changeset commit:cdm-vaadin|2108e10fcf43997a6d4952455c25948e3247f265. Andreas Kohlbecker
04:00 PM bug #7337 (Closed): creating of new NameTypeDesignation for empty registration ends up without typified name
The typifiedName is retrieved either from existing nameTypeDesignations or the Registration.name is being used instea... Andreas Kohlbecker
04:29 PM task #7338 (Closed): Validate taxon name against the higher taxon name
Beim Namens-Editor für Arten oder infraspezifische Taxa ist das nächst-höhere Taxon meist schon im System. Einfachste... Andreas Kohlbecker
04:23 PM Revision 2108e10f (cdm-vaadin): fix #7337 adding typifiedName reference to TypeDesignationWorkingsetEditorAction
Andreas Kohlbecker
04:06 PM Revision fb028abd (taxeditor): ref #7095 documentation
Patrick Plitzner
04:04 PM Revision 9f8c59b4 (taxeditor): ref #7095 Simplify RowWrapper getDataValueForFeature()
Patrick Plitzner
04:03 PM Revision 5a9a799e (taxeditor): ref #7095 Disable DetailsView for CharacterMatrix
Patrick Plitzner
04:02 PM Revision 6a65a580 (cdmlib): ref #7095 Fix convenience method for CategoricalData
Patrick Plitzner
02:43 PM feature request #7334 (In Progress): Make pro parte and partial synonyms real concept relationships
Andreas Müller
02:19 PM feature request #7334 (Closed): Make pro parte and partial synonyms real concept relationships
Since #5974 pro parte and partial is stored as attribute of a synonym which belongs to exactly 1 accepted taxon.
P...
Andreas Müller
02:40 PM Revision 84046c2e (cdmlib): ref #7336, ref #7334 add pro parte synonym, partial synonym and partial misapplied name as taxon relationship types
Andreas Müller
02:40 PM Revision b26b271b (cdmlib): fix clone method for TaxonBase
Andreas Müller
02:40 PM Revision 886f5b0b (cdmlib): ref #5762 adapt clone method in IdentifiableEntity as rights are reusable now
Andreas Müller
02:40 PM Revision 630df75e (cdmlib): cleanup
Andreas Müller
02:38 PM bug #7314 (Closed): support for dot and comma in Georeferenz, Error radius, Altitude, Distance to ...
thank you for reviewing. I will close this issue Andreas Kohlbecker
11:23 AM bug #7314: support for dot and comma in Georeferenz, Error radius, Altitude, Distance to ...
dot=komma and allowed in all fields except of elevation? Happy! Wolf-Henning Kusber
11:17 AM bug #7314: support for dot and comma in Georeferenz, Error radius, Altitude, Distance to ...
Hi Henning,
please review if you are happy with the solution.
Andreas
Andreas Kohlbecker
11:16 AM bug #7314 (Resolved): support for dot and comma in Georeferenz, Error radius, Altitude, Distance to ...
Applied in changeset commit:cdm-vaadin|ee699257f7f2fb3748c260308279706df2140c21. Andreas Kohlbecker
02:32 PM feature request #7336 (Closed): Implement partial misapplied names in TaxEditor
same as #7215 but for partial, not pro parte misapplied names. Andreas Müller
02:23 PM feature request #7335 (Closed): Allow editing of pro parte and partial synonyms in the same way as misapplied names in the NameEditor
With #7334 pro parte and partial synonyms will be editable only as concept relationships. Therefore they must be hand... Andreas Müller
02:15 PM Revision 27bcc3b4 (cdmlib): also revert the test changes
Katja Luther
01:59 PM Revision 6bb1be80 (cdmlib): revert null check in merge
Katja Luther
12:46 PM Revision 0b3a175b (cdmlib): minor
Katja Luther
12:43 PM Revision 95ded80a (cdmlib): avoid potential NPE
Katja Luther
12:36 PM Revision d94f88fa (cdmlib): smaller changes and code cleaning
Katja Luther
11:46 AM Revision 6d0ef1d2 (taxeditor): fix double call of selection dialog
Katja Luther
11:16 AM Revision ee699257 (cdm-vaadin): fix #7314 DecimalConverter and IntegerConverter for better parsing of numbers in min max fields
Andreas Kohlbecker
10:43 AM Revision 38ac93ba (taxeditor): fix problem of grey block in name editor after changing from taxon of misappliedName relation
Katja Luther
10:40 AM Revision 5385aefa (taxeditor): changing fromTaxon in editor fixed
Katja Luther
10:39 AM Revision 48efbc43 (taxeditor): event handling in name editor should also check for the active editor
Katja Luther
10:34 AM bug #7230: Refresh in name editor does not work if using "reuse taxon" in Misapplied Name View (e4)
Katja Luther wrote:
> now the details view and name editor are updated, but there is still a bug in showing the taxo...
Katja Luther
10:08 AM Revision 17d882ef (taxeditor): events for name editor need to handle the related taxon
Katja Luther
09:55 AM Revision b0324ac3 (taxeditor): fix problem of grey block in name editor after changing from taxon of misappliedName relation
Katja Luther
09:25 AM feature request #7082 (Closed): Implement integration test for the SpecimenTypeDesignationWorkingsetEditorPresenter
completed and released in version 4.13 Andreas Kohlbecker
09:19 AM Revision b6d7032c (taxeditor): changing fromTaxon in editor fixed
Katja Luther
09:06 AM bug #7333: LIE when creating registration for existing name
hi Henning,
I solved the problem, please also test yourself to verify the fix.
Andreas
Andreas Kohlbecker
09:05 AM bug #7333 (Resolved): LIE when creating registration for existing name
Applied in changeset commit:cdm-vaadin|cb426588993d36f28edff82d87254828e9e41e86. Andreas Kohlbecker
09:04 AM Revision cb426588 (cdm-vaadin): fix #7333 initializing blockedBy in newly created registrations to avoid LIEs
Andreas Kohlbecker

03/27/2018

07:16 PM bug #7333 (Closed): LIE when creating registration for existing name
this happened in test database:
1. create new registration for "Infusionsthierchen. 1838"
2. new registration for...
Andreas Kohlbecker
06:57 PM task #7332 (New): Registration Workingset Editor: better UI behavior with blocking Registation in same workingset

![](picture647-1.png)
Andreas Kohlbecker
04:30 PM Revision 1caf3f63 (cdm-vaadin): ref #6740 re-enabling type status flags by default
Andreas Kohlbecker
04:16 PM Revision b7816bf4 (taxeditor): ref #7086 Fix focus problem when saving
Patrick Plitzner
03:49 PM Revision c1e695fc (cdm-vaadin): moving AlternativeUnitilsJUnit4TestClassRunner to org.unitils
Andreas Kohlbecker
03:49 PM Revision 248d15d9 (taxeditor): ref #7095 Add remove description button
Patrick Plitzner
03:48 PM Revision b064a5d4 (cdmlib): moving AlternativeUnitilsJUnit4TestClassRunner to org.unitils
Andreas Kohlbecker
03:47 PM Revision c3233f9b (cdmlib): moving AlternativeUnitilsJUnit4TestClassRunner to org.unitils
Andreas Kohlbecker
02:56 PM bug #7331: AdvancedBeanInitializer fails to initialize properties of preinitialized beans in the graph in very special situations
I created a test to reproduce this problem in isolation commit:7d60d703 without success and I am avoiding the effect ... Andreas Kohlbecker
01:50 PM bug #7331 (New): AdvancedBeanInitializer fails to initialize properties of preinitialized beans in the graph in very special situations

In the `RegistrationWorkingSetService.loadWorkingSetByReferenceID(Integer referenceID)` a `RegistrationWorkingSet` ...
Andreas Kohlbecker
02:52 PM Revision 1d6d9f08 (cdm-vaadin): ref #7331 cicrumventing the bug for RegistrationWorkingSetService.loadWorkingSetByReferenceID()
Andreas Kohlbecker
02:44 PM Revision 7d60d703 (cdmlib): ref #7331 test created and loging more details at level TRACE
Andreas Kohlbecker
02:21 PM Revision 2584f7d2 (taxeditor): event handling in name editor should also check for the active editor
Katja Luther
02:08 PM Revision 2c04b7fb (taxeditor): events for name editor need to handle the related taxon
Katja Luther
01:02 PM Revision 8ccf2acc (taxeditor): improve deduplication handling and saving in bulkeditor
Katja Luther
12:51 PM Revision 0a7b1887 (taxeditor): fix problems while creating homotypic synonyms
Katja Luther
12:49 PM Revision a174673d (taxeditor): better handling of updating misapplied names
Katja Luther
12:45 PM Revision fc0323fa (taxeditor): missed to commit WorkbenchEventConstants
Katja Luther
12:45 PM Revision 513edeb7 (taxeditor): better handling of updating misapplied names
Katja Luther
12:34 PM Revision 33252062 (taxeditor): better handling of updating misapplied names
Katja Luther
12:30 PM task #7330 (New): TitleAndNameCacheAutoInitializer misses out References
Reference titleCaches are not intitialized by the TitleAndNameCacheAutoInitializer
Adding this additional initiali...
Andreas Kohlbecker
12:29 PM Revision 57838f98 (taxeditor): ref #7230: refresh of name editor and details view after changing taxon of misapplied name relationship
Katja Luther
12:10 PM Revision 94e132e8 (taxeditor): Updated version in pom / project files to taxeditor version : 4.14.1 and cdmlib version : 4.14.0
jenkins

03/26/2018

05:45 PM feature request #7329 (Resolved): Unify naming for both specimen editors (bulk and hierarchy)
Applied in changeset commit:taxeditor|ed46b81a966440711b008810028420120823a331. Patrick Plitzner
05:44 PM feature request #7329 (Closed): Unify naming for both specimen editors (bulk and hierarchy)
They should be named Specimen Editor (tree) resp. Specimen Editor (list) Patrick Plitzner
05:45 PM Revision ed46b81a (taxeditor): fix #7329 Unify naming for both specimen editors (bulk and hierarchy)
Patrick Plitzner
03:43 PM Revision 7efcfaee (taxeditor): ref #7095 Fix possible class cast exception
Patrick Plitzner
03:25 PM Revision eb990cca (taxeditor): ref #7095 Include unpublished taxa in WS node filter
Patrick Plitzner

03/23/2018

09:56 PM task #7316 (In Progress): [E+M] Handle name relations correctly
Andreas Müller
05:19 PM feature request #7178: implement collectorTitleCache in TeamOrPersonField (vaadin)
Aber bei diesem Ticket geht es um das vaadin UI nicht um die titleCache-Generierung in der Library. Andreas Kohlbecker
11:34 AM feature request #7178: implement collectorTitleCache in TeamOrPersonField (vaadin)
Andreas Kohlbecker wrote:
> i don't understand why this issue is blocking #7309 can you please clarify this dependen...
Andreas Müller
11:16 AM feature request #7178 (Feedback): implement collectorTitleCache in TeamOrPersonField (vaadin)
i don't understand why this issue is blocking #7309 can you please clarify this dependency or was this relation creat... Andreas Kohlbecker
04:52 PM bug #7314 (In Progress): support for dot and comma in Georeferenz, Error radius, Altitude, Distance to ...
Sorry mein Fehler!
Ich hatte mir nur `absoluteElevation` angesehn und bin davon ausgegangen, dass alle anderen min...
Andreas Kohlbecker
02:45 PM bug #7314: support for dot and comma in Georeferenz, Error radius, Altitude, Distance to ...
Altitude: ganze Zahlen okay
Error radius: ganze Zahlen okay
Distance to water surface: wenn nur ganze Zahlen mögl...
Wolf-Henning Kusber
04:44 PM feature request #7328 (Closed): Add label provider for GatheringEvent in referencing objects view
Excellent! Andreas Kohlbecker
03:41 PM feature request #7328 (Resolved): Add label provider for GatheringEvent in referencing objects view
Applied in changeset commit:taxeditor|bad14dbc76b3b028c7e2ca083756ed5165b3a131. Andreas Müller
03:08 PM feature request #7328 (Closed): Add label provider for GatheringEvent in referencing objects view
Andreas Müller
03:40 PM Revision bad14dbc (taxeditor): fix #7328 Add label provider for GatheringEvent in referencing objects view
Andreas Müller
03:38 PM Revision a147c1df (taxeditor): cleanup
Andreas Müller
03:11 PM Revision 896cca0d (cdmlib): cleanup
Andreas Müller
03:11 PM Revision 08bbdc46 (cdmlib): ref #7328 make distanceString method static and public
Andreas Müller
03:00 PM feature request #6740: Popup Editor for NameTypeDesignation
Gattung mit Species Name als Typus angebunden. Funktioniert, reicht aber nicht als Test. Wolf-Henning Kusber
02:48 PM Revision 2b50eebb (taxeditor): cleanup
Andreas Müller
02:33 PM bug #7284 (Resolved): Multiple taxeditor jars created in p2 update for a single jenkins build
Changed
~~~
rm -rf $M2REPO/eu/etaxonomy/cdmlib-*
~~~
to
~~~
rm -rf $M2REPO/eu/etaxonomy/
~~~
in jenk...
Patrick Plitzner
02:29 PM Revision 045a6bb6 (taxeditor): ref #7284 Move clean target to parent pom
- Instead configure jenkins job to delete files Patrick Plitzner
02:17 PM Revision c4fe6981 (taxeditor): ref #7284 Move clean target to parent pom
Patrick Plitzner
01:40 PM Revision 411d8aeb (taxeditor): adapt to cdmlib changes
Patrick Plitzner
01:09 PM Revision 78895696 (taxeditor): ref #7284 Remove folder in default clean phase
Patrick Plitzner
12:03 PM feature request #6344: Restrict UI for editing molecular data
moving to reviewed milestone as this does not have high priority at the moment Patrick Plitzner
12:00 PM Revision 7dab8082 (cdmlib): ref #6484 Adjust count method to find method to return the same number
- performance can still be improved by integrating AssignmentStatus
and/or indirectlyAssociatedSpecimen into the HQL ...
Patrick Plitzner
11:51 AM Revision cc5bb09d (taxeditor): ref #7284 Fix server URL
Patrick Plitzner
11:29 AM feature request #7026 (Closed): RegistrationVoter evaluates CdmAuthorities with RegistrationStatus properties
fully solved now after the bug described in #7323 has been fixed Andreas Kohlbecker
10:54 AM Revision 7fbd5db8 (taxeditor): ref #7284 Do not fail on error
Patrick Plitzner
10:41 AM Revision 1cfc76cb (cdmlib): ref #6484 Move enum AssignmentStatus to cdm-persistence
Patrick Plitzner
10:26 AM Revision 55971ae2 (taxeditor): ref #7284 Adjust path again
Patrick Plitzner
10:24 AM bug #7327 (Resolved): ReferencePopupEditor: multiple exceptions and problems during creation of a journal section
Henning, please review. Andreas Kohlbecker
10:23 AM bug #7327: ReferencePopupEditor: multiple exceptions and problems during creation of a journal section
I could not reproduce the exact problem described here but found a bug in the LazyCombobox paging provider which is f... Andreas Kohlbecker
10:17 AM bug #7327 (Duplicate): ReferencePopupEditor: multiple exceptions and problems during creation of a journal section
Hallo Andreas,
Betrifft Working set:
http://test.e-taxonomy.eu/cdmserver/phycobank/app/registration#!workingset/106...
Andreas Kohlbecker
10:18 AM bug #6437 (Resolved): Always update titleCache for nomenclatural reference
Applied in changeset commit:taxeditor|2a5271cac0b0341736ba10e6b0656b395bd75147. Patrick Plitzner
10:18 AM Revision 5a2cdd34 (taxeditor): ref #7284 Adjust path
Patrick Plitzner
10:00 AM Revision 1994060f (cdm-vaadin): adding missing type filter to TeamOrPerson select to avoid class cast exceptions
Andreas Kohlbecker
10:00 AM bug #7227 (Feedback): New name bulk editor shows all menu entries
I still see some menu items
![](name_editor_initial_context_menu.png)
Patrick Plitzner
09:15 AM bug #7326 (Closed): NPE when setting focus on specimen in Specimen Editor (hierarchy)
it's fixed! Andreas Kohlbecker
07:41 AM bug #7326 (Resolved): NPE when setting focus on specimen in Specimen Editor (hierarchy)
Applied in changeset commit:taxeditor|462c058e6178f3418dbd100c3eb1990a2665ac27. Patrick Plitzner
09:09 AM Revision 2a5271ca (taxeditor): fix #6437 Generate title caches to avoid outdated information
Patrick Plitzner
08:15 AM bug #6769 (Feedback): Usages can not be created anymore in usage perspective
This works for me. Can you please check again? Patrick Plitzner
08:09 AM feature request #7071: Reenable restore functionality
removing milestone because master ticket is in current release Patrick Plitzner
08:08 AM feature request #7007: Migrate IMemento functionality
removing milestone because master ticket is in current release Patrick Plitzner
08:07 AM feature request #7007: Migrate IMemento functionality
removing milestone because master ticket is in milestone Patrick Plitzner
08:08 AM feature request #7043: Migrate validation view
removing milestone because master ticket is in current release Patrick Plitzner
08:08 AM feature request #7015: Migrate recent menu item
removing milestone because master ticket is in current release Patrick Plitzner
08:05 AM bug #7307 (Closed): Synonyms should not be shown when creating a new concept relation
This is fixed Patrick Plitzner
08:04 AM Revision 6502851f (taxeditor): ref #7284 Delete taxeditor-INTEGRATION maven repo during clean phase
Patrick Plitzner
07:46 AM bug #7291 (Feedback): PolytomousKey Node should not allow to search for synonym
This still happens for me.
In both cases:
* Right-click in PK navigator -> New -> Taxonomic Scope
* Open a key ...
Patrick Plitzner
07:41 AM Revision 462c058e (taxeditor): fix #7326 Fix potential NPE
Patrick Plitzner

03/22/2018

05:42 PM bug #7313: eu.etaxonomy.cdm.dataInserter.RegistrationRequiredDataInserter add all terms to vocabulary
The original description was referring to terms which have been created during IAPT import, which has already be run ... Andreas Kohlbecker
04:25 PM bug #7079: P2 updates not found
we need to review and test this once again after the release 4.15 to sure it is fixed. Andreas Kohlbecker
04:23 PM bug #7279 (Closed): p2 sites are extremely huge
this looks ok now! Andreas Kohlbecker
04:18 PM bug #7284 (In Progress): Multiple taxeditor jars created in p2 update for a single jenkins build
Patrick Plitzner wrote:
> from Andreas K.:
>
> Im jenkins worspace gibt es einen ordner indem sich noch immer vie...
Andreas Kohlbecker
04:12 PM bug #7326: NPE when setting focus on specimen in Specimen Editor (hierarchy)
This but can be reproduced independently of the ReferencingObjectsView and seems to happen with any Specimen! This mu... Andreas Kohlbecker
04:05 PM bug #7326 (Closed): NPE when setting focus on specimen in Specimen Editor (hierarchy)
**Version: 4.15.0-SNAPSHOT Build Date: 2018-03-22 15:47 CET**
I used the new *Open in ... Specimen Editor* context...
Andreas Kohlbecker
04:10 PM feature request #7324 (Closed): Add "Open in.." for GatheringEvents in ReferencingObjectsView
Seems to be solved even if I stumbled into an NPE (#7326) during the test of this feature, but this NPE is most proba... Andreas Kohlbecker
03:53 PM bug #6389 (Closed): Returning a Map in cdmlib leads to data loss
looks ok and I applied your changeset 98baf5f onto cdmlib-cache Andreas Kohlbecker
03:48 PM task #7325: Taxeditor uses CdmTransientEntityCacher from cdmlib-cache
I cared for commit:taxeditor|98baf5f ( #6389 ) Andreas Kohlbecker
03:46 PM task #7325 (In Progress): Taxeditor uses CdmTransientEntityCacher from cdmlib-cache
I just discovered that at least one changeset from the taxeditor project (commit:taxeditor|98baf5f8 ) which fixed a b... Andreas Kohlbecker
10:41 AM task #7325 (Closed): Taxeditor uses CdmTransientEntityCacher from cdmlib-cache
Hi Katja,
I did reviewing your changes.
All Classes which have moved to cdmlib-cache are removed from the taxed...
Andreas Kohlbecker
09:57 AM task #7325 (Resolved): Taxeditor uses CdmTransientEntityCacher from cdmlib-cache
Andreas Müller
09:53 AM task #7325: Taxeditor uses CdmTransientEntityCacher from cdmlib-cache
Hallo Katja,

das sollte relativ einfach sein:

1. Subclass von CdmTransientEntityCacher: Zb: ConversationalTra...
Andreas Kohlbecker
09:52 AM task #7325 (Closed): Taxeditor uses CdmTransientEntityCacher from cdmlib-cache
By solving #7206 the `CdmTransientEntityCacher` has been moved from the taxeditor project into a new cdmlib module.
...
Andreas Kohlbecker
03:47 PM Revision 1c9d09b9 (cdmlib): ref #7325 applying taxeditor changeset (98baf5f ref #6389) onto cdmlib-cache
Andreas Kohlbecker
03:19 PM bug #7209 (Closed): use git repos instead of svn in all pom.xml
I removed all scm entries from the sub-modules Andreas Kohlbecker
03:18 PM bug #7209: use git repos instead of svn in all pom.xml
Applied in changeset commit:cdmlib|3a2a16822aaf70332dd5b733ade43b9f0478a38d. Andreas Kohlbecker
03:18 PM Revision 3a2a1682 (cdmlib): fix #7209 removing scm entries from maven submodules
Andreas Kohlbecker
03:13 PM bug #7133 (Rejected): Registration must not allow duplicate identifers
Andreas Kohlbecker
03:08 PM bug #7314 (Feedback): support for dot and comma in Georeferenz, Error radius, Altitude, Distance to ...
Hallo Henning,
all diese Felder erlauben grundsätzlich nur die Eingabe von Integer werden. Reelle Zahlen werden da...
Andreas Kohlbecker
12:13 PM bug #7314 (In Progress): support for dot and comma in Georeferenz, Error radius, Altitude, Distance to ...
Andreas Kohlbecker
12:55 PM Revision 201f1053 (taxeditor): ref #7086 Add initial label to created working sets
Patrick Plitzner
12:49 PM Revision df5f3355 (taxeditor): Adapt drag apdapter to TaxonNodeDto changes
Patrick Plitzner
12:14 PM Revision 4124987e (cdm-vaadin): fix #7249
Andreas Kohlbecker
11:59 AM bug #7249 (Closed): NameTypeDesignationEditor delete not working
excellent! using `deleteTypedesignation(uuid, uuid)` solves the problem. Andreas Kohlbecker
11:38 AM bug #7322 (Closed): registration workingset editor handles multiple different submitters correctly
Andreas Kohlbecker
11:37 AM Revision adb55b39 (cdm-vaadin): ref #7322 showing sumbitter per registration in working set editor
Andreas Kohlbecker
11:33 AM task #7269 (Resolved): Use redmine as message hub for submitter curator communication
Andreas Kohlbecker
11:07 AM Revision c0fb722d (taxeditor): improve deduplication handling and saving in bulkeditor
Katja Luther

03/21/2018

07:11 PM feature request #7324 (Resolved): Add "Open in.." for GatheringEvents in ReferencingObjectsView
Applied in changeset commit:taxeditor|2864959f89db37fe295e2e82819063f4507cfdaa. Patrick Plitzner
07:09 PM feature request #7324 (Closed): Add "Open in.." for GatheringEvents in ReferencingObjectsView
The option should be to open the GatheringEvent in the specimen editor, showing all the FieldUnits referencing the Ga... Patrick Plitzner
07:11 PM Revision 2864959f (taxeditor): fix #7324 Add "Open in.." for GatheringEvents in ReferencingObjectsView
Patrick Plitzner
07:11 PM Revision 3835ed3e (cdmlib): ref #7324 Add new service method getFieldUnitsForGatheringEvent()
Patrick Plitzner
06:46 PM Revision de46814a (cdm-vaadin): adding button descriptions to RegistrationItemNameAndTypeButtons
Andreas Kohlbecker
06:46 PM Revision ca768ad3 (cdm-vaadin): ref #7322 hiding addTypeButton when user is not permitted to update the registration
Andreas Kohlbecker
06:24 PM bug #7323 (Closed): RegistrationVoter ignores uuid if propery given
tests implemented and also tested in vaadin Registration ui Andreas Kohlbecker
06:19 PM bug #7323 (Resolved): RegistrationVoter ignores uuid if propery given
Applied in changeset commit:cdmlib|1250b949eaeec10f5ed3432cfcb6148b5b69b433. Andreas Kohlbecker
05:48 PM bug #7323 (Closed): RegistrationVoter ignores uuid if propery given
example:
A user has the GrantedAuthority `REGISTRATION(PREPARATION).[UPDATE]{adcf279b-56dd-4488-8e21-7dfecf96f53e}...
Andreas Kohlbecker
06:18 PM Revision 1250b949 (cdmlib): fix #7323 adding missing uuid match check in furtherVotingDescissions()
Andreas Kohlbecker
03:46 PM bug #7322 (Closed): registration workingset editor handles multiple different submitters correctly
The registrations bundled into one workingset can potentially be assigned to multiple submitters. The registration wo... Andreas Kohlbecker
03:40 PM Revision 2085c699 (cdm-vaadin): ref #7269 manaing enabled state of messages button and adding description text
Andreas Kohlbecker
12:26 PM Revision 1affb934 (cdm-vaadin): ref #7269 improving layout of RegistrationMessagesPopup and harmonization of styles
Andreas Kohlbecker
10:20 AM bug #7321: multi-language textfields should not show empty text when there is text
Note: Here we talk about the PKNode list table in the middle of the perspective, not the details view. Andreas Müller
09:08 AM bug #7321 (Closed): multi-language textfields should not show empty text when there is text
in polytomouskeynode editor multi-language text fields no text is displayed if there is no text in the default langua... Katja Luther
08:59 AM bug #7320 (Closed): dirty flag is not set when clicking "Erneuere Knoten" in Polytomous Keynode editor
After clicking the dirty flag is not set and it is not possible to save the changes. Katja Luther
 

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