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From 02/18/2018 to 03/19/2018

03/19/2018

07:25 PM task #7319 (In Progress): [CHECK] Import synonyms correctly in E+M
Andreas Müller
07:24 PM task #7319 (Resolved): [CHECK] Import synonyms correctly in E+M
Since CDM 4.1 synonyms may belong only to exactly 1 taxon (#5803, #5974). Therefore pro parte/partial synonyms should... Andreas Müller
03:28 PM task #7318 (New): cdm_dataportal installation profile misses permissions
Users being assigned to the role 'CDM admin' need the following permissions to be edit the multilanguage settings for... Andreas Kohlbecker
11:41 AM bug #7241: Missing rights are not correctly indicated in Vaadin distribution editor - flexible vaadin errorhandler is needed
I modified the DelegatingErrorHandler and ErrorTypeHandler a bit in order to allow using it generically in more conte... Andreas Kohlbecker
10:53 AM feature request #6812: Improve TaxEditor download site
Andreas Kohlbecker wrote:
> Aber dadurch müssten die Dateien immer noch jedes mal in den Ordner der aktuellsten Vers...
Andreas Kohlbecker
10:49 AM feature request #6812: Improve TaxEditor download site
Aber dadurch müssten die Dateien immer noch jedes mal in den Ordner der aktuellsten Version verschoben werden oder?
...
Andreas Kohlbecker
10:45 AM feature request #6812: Improve TaxEditor download site
Also dann doch besser die B-Variante:

In der Apache-Konfigurtion ein internen "Forward" für die Location /taxedit...
Andreas Kohlbecker
10:45 AM feature request #6812: Improve TaxEditor download site
Hallo!

Also die Seite benötigt PHP, JQuery sowie JSON Dateien für die Locales, nur plain html ist es daher le...
Andreas Kohlbecker
10:44 AM feature request #6812: Improve TaxEditor download site
Hallo Fabian,

in meinem Kommentar https://dev.e-taxonomy.eu/redmine/issues/6812#note-11 habe ich an zwei Möglichk...
Andreas Kohlbecker

03/16/2018

09:56 AM task #7316 (Resolved): [E+M] Handle name relations correctly
Decision:
* we export ALL fromNames not yet in taxon export (ERS: also later homonyms might be of interest)
* w...
Andreas Müller

03/15/2018

05:11 PM task #7315 (Rejected): remove workaround RedmineTransportAccessor

1. fix https://github.com/taskadapter/redmine-java-api/issues/306
1. deploy fix
1. remove eu.etaxonomy.cdm.ext....
Andreas Kohlbecker
04:22 PM bug #7314 (Closed): support for dot and comma in Georeferenz, Error radius, Altitude, Distance to ...
Hallo Andreas,
nicht nur in der Georeferenz (is covered by #7217), in den Feldern Error radius, Altitude, Distance t...
Andreas Kohlbecker
04:05 PM bug #7313 (Closed): eu.etaxonomy.cdm.dataInserter.RegistrationRequiredDataInserter add all terms to vocabulary

Im `eu.etaxonomy.cdm.dataInserter.RegistrationRequiredDataInserter` werden KindOfUnitTerms angelegt:

~~~
if(...
Andreas Kohlbecker
09:46 AM feature request #3746: Implement time period scope for description elements in TaxEditor
Every information may have a time scope. A common name e.g. may have been used only in a certain century. And categor... Andreas Müller

03/14/2018

04:12 PM feature request #3746: Implement time period scope for description elements in TaxEditor
The time period should be displayed for all kind of features?
I think for some it is not necessary, for example comm...
Katja Luther
03:31 PM bug #7312 (Resolved): some preferences are saved immediately, cancel has no effect
Applied in changeset commit:taxeditor|9457da34b9e8a380eb4a7541820bfcbfb1cdbf64. Katja Luther
03:30 PM bug #7312: some preferences are saved immediately, cancel has no effect
some preferences are saved immediately when selecting, but it should be saved when clicking on ok or apply Katja Luther
03:29 PM bug #7312 (Closed): some preferences are saved immediately, cancel has no effect
Katja Luther

03/13/2018

03:45 PM feature request #7305: [Dicuss] searching for authorteam with more than three members is incomplete
Generally we need "advanced searches" for all types of searches like bulk editor, taxon search, etc.
However, the ...
Andreas Müller
03:35 PM feature request #7311: drop down for ranks should stay open when typing a character
This is an issue for ALL dropdowns for (mostly) terms. Andreas Müller
01:44 PM feature request #7311 (Feedback): drop down for ranks should stay open when typing a character
mail von Sabine:
Wenn ich einen Typus ergänzen möchte (Type designations  New name), muss ich zuerst den Rang auswä...
Katja Luther
02:04 PM feature request #7244 (In Progress): DistributionStatus editor help
Fabian Reimeier

03/12/2018

04:21 PM bug #6495 (Worksforme): Fix null titleCache for E+M import
This issue seems to be fixed in new imports
Tested with
~~~ sql
SELECT *
FROM Reference ref
WHERE ref.protec...
Andreas Müller
02:47 PM bug #7310 (New): exception while double click in bulkeditor
sometimes doing a double click on a cell of the bulk editor generates an exception:
~~~ text
login : w.berendsohn...
Katja Luther
12:36 PM bug #7227 (Resolved): New name bulk editor shows all menu entries
please review Katja Luther
12:09 PM feature request #7309 (Feedback): Implement collectorTitle and collectorTitleCache and the same for nomenclatural title in tax editor
Teams and persons in future will have the field collectorTitleCache. Additionally Person will have a field collectorT... Katja Luther
10:43 AM bug #7226: Name relationship Dialog shows same name
please review Katja Luther
10:41 AM bug #7226 (Resolved): Name relationship Dialog shows same name
Applied in changeset commit:taxeditor|8b30f1cf45303bfe602e26112caa11fae9cf9416. Katja Luther
10:08 AM bug #7291: PolytomousKey Node should not allow to search for synonym
please review Katja Luther
10:05 AM bug #7291 (Resolved): PolytomousKey Node should not allow to search for synonym
Applied in changeset commit:taxeditor|9df04a28f9c5187ad2a682377a7512bfe80ee3c7. Katja Luther
10:08 AM bug #7307: Synonyms should not be shown when creating a new concept relation
please review Katja Luther
10:05 AM bug #7307 (Resolved): Synonyms should not be shown when creating a new concept relation
Applied in changeset commit:taxeditor|750fb5fcac7c8e307ff44120d3cc432a6f24999b. Katja Luther

03/09/2018

09:25 PM feature request #3746: Implement time period scope for description elements in TaxEditor
This is needed for cyprus therefore I put it to highest Andreas Müller
07:57 PM feature request #7308 (Closed): Add nomen oblitum to zoological taxon name status
Andreas Müller
07:56 PM feature request #7308 (Resolved): Add nomen oblitum to zoological taxon name status
Applied in changeset commit:cdmlib|90704ace9e95ceaf09418c87206a6c267c5106e1. Andreas Müller
07:48 PM feature request #7308 (Closed): Add nomen oblitum to zoological taxon name status
see ICZN Art. 23.9 http://www.nhm.ac.uk/hosted-sites/iczn/code/includes/page.jsp?article=23&nfv=#9 Andreas Müller
04:14 PM bug #7307 (Closed): Synonyms should not be shown when creating a new concept relation
When creating a new concept relation e.g. "Contradiction to" you can choose a synonym which leads to a ClassCastExcep... Patrick Plitzner
03:45 PM task #6158 (Resolved): Update EDIT documentation from svn to git
I searched for strings like "wp5" and "dev." and replaced everything I found with the redirected URL. Patrick Plitzner
03:05 PM bug #6318 (Resolved): Truncate TextData in FactualData View
Applied in changeset commit:taxeditor|45e3e6351c764c3055344db6aba5f80e30f3a328. Patrick Plitzner
02:46 PM feature request #5616: Add the"Open in..." menu to taxon search
moving to current milestone to discuss Patrick Plitzner
02:44 PM feature request #6909 (Closed): Migrate taxon navigator
Andreas Müller wrote:
> Creating a new classification works now. Also no exception is thrown anymore.
>
> But in ...
Patrick Plitzner
02:44 PM bug #7306 (New): No initial default classification is created when creating a new data source
When a new data source is created from the DataSourceView the DB is emtpy but there used to be a default classification Patrick Plitzner
02:33 PM feature request #7009 (Closed): Replace part descriptor IDs in open handler with AppModel constants
Patrick Plitzner
02:32 PM feature request #7009 (Resolved): Replace part descriptor IDs in open handler with AppModel constants
Applied in changeset commit:taxeditor|80313393fe8fa41d01d5e14e10c9b4c4589f9d5f. Patrick Plitzner
01:39 PM bug #7031 (Resolved): Open in referencing objects view must not show "Open in referencing Objects"
Patrick Plitzner
01:36 PM feature request #2380 (Resolved): TaxonNavigator should work with DTO objects instead of full blown cdm instances
now the service uses TaxonNodeDto because we need some more information in the navigator.
the navigator and all ha...
Katja Luther
11:19 AM feature request #7305 (Closed): [Dicuss] searching for authorteam with more than three members is incomplete
mail von Henning:
noch eine Folge davon, dass bibliografische Autoren nach einigen Positionen als et al. abgekür...
Katja Luther
11:07 AM bug #7282 (Resolved): Still remaining feature tree editor issues
Andreas, please close when all sub tasks are fixed. Patrick Plitzner
09:57 AM bug #7282 (In Progress): Still remaining feature tree editor issues
Andreas Müller
11:05 AM feature request #6746 (Resolved): Implement DetailsView and show SupplementalDataView for Feature Tree and FeatureNode
Patrick Plitzner
09:53 AM bug #6991 (Worksforme): Exception while editing States in State term editor
I am not sure how to reproduce this and I have never gotten this exception in the meantime. Patrick Plitzner
09:06 AM bug #6844 (Rejected): New feature tree selection does not allow "no save"
By implementing #6746 we no longer have the option to choose a feature tree via the selection dialog but instead all ... Patrick Plitzner

03/07/2018

02:20 PM feature request #7285 (Resolved): Edaphobase import: implement ranks Cohort, Hyporder
maybe we still need German and other translation Andreas Müller
01:47 PM task #6753: Edaphobase data issues before import
included_in relationships with an invalid B taxon
~~~ sql
SELECT s.valid, t.valid, synonym_role, s.display_string...
Andreas Müller
09:54 AM bug #7304 (New): Add warning to parsed references if reference type is unclear
AM:
ich habe mir das jetzt nochmal im Parser angeschaut. Der Fall
xxx in Acta Univ.Carol., Biol. 43(2): 105. 1...
Andreas Müller

03/06/2018

12:01 PM task #6753: Edaphobase data issues before import
Taxa mit Rolle A in "included in" und "is synonym of" Beziehung. Beide valid=f ist evtl. nicht kritisch.
~~~ sql
...
Andreas Müller
09:58 AM feature request #7301 (Worksforme): Refresh open name editors when deleting specimen used in type designation
sorry, this was a mistake because I did not update my workspace. everything works fine. Katja Luther
09:56 AM bug #6668: NPE in DetailsView when deleting a type specimen
Katja Luther wrote:
> it works, but we have to refresh the name editor otherwise the NPE of note-3 appears. Maybe we...
Katja Luther

03/05/2018

04:28 PM bug #6973 (Resolved): Refreshing details and supplemental view
I could not reproduce the behavior you described with clicking in the empty detail view Patrick Plitzner
03:41 PM bug #6844 (In Progress): New feature tree selection does not allow "no save"
Patrick Plitzner
03:38 PM bug #7292 (Closed): TaxonSelectionDialog throws error when searching for '?'
works fine Patrick Plitzner
01:47 PM bug #7292 (Resolved): TaxonSelectionDialog throws error when searching for '?'
please review Katja Luther
03:00 PM bug #7227 (In Progress): New name bulk editor shows all menu entries
this is fixed, except for setMarker and openIn Katja Luther
02:26 PM bug #7303 (New): grey bar on name editor when creating a synonym
Norbert:
"Wenn ich im Freitexteditor zu einem Taxonnamen per Kontextmenu schaffen möchte, versagt das Refresh. Sta...
Patrick Plitzner
02:24 PM bug #7302 (New): [MASTER][DISCUSS] Name Editor refresh/redraw problems
This is the master ticket for all display bugs of the taxon name editor. Most of these can be solved by refreshing or... Patrick Plitzner
01:40 PM bug #7230 (Resolved): Refresh in name editor does not work if using "reuse taxon" in Misapplied Name View (e4)
Katja Luther wrote:
> now the details view and name editor are updated, but there is still a bug in showing the taxo...
Katja Luther
01:19 PM bug #4136: authorship part of names not being refreshed in taxon navigator
please review Katja Luther
01:18 PM bug #4136 (Resolved): authorship part of names not being refreshed in taxon navigator
Applied in changeset commit:taxeditor|fae92bbdf533ff1cd3c67342a0cd899d4cdf2b53. Katja Luther
11:03 AM bug #6330 (Resolved): Defined sort order for Mediarepresentations
Applied in changeset commit:taxeditor|1c3cb06bce28e238ec52c0469edaa0c7c41119aa. Patrick Plitzner

03/02/2018

04:29 PM bug #6526 (Feedback): Show types in correct order
I added a comparator which sorts according to the designation status defined by the ordered terms. But this order doe... Patrick Plitzner
03:18 PM feature request #4611 (New): I18n for the TaxEditor menu
moving this to reviewed milestone as this will be an ongoing task Patrick Plitzner
03:16 PM feature request #7301 (Feedback): Refresh open name editors when deleting specimen used in type designation
Patrick Plitzner
03:16 PM feature request #7301: Refresh open name editors when deleting specimen used in type designation
The refreshing of the name editor was the fix of #6668
So this ticket should be obsolete.
Katja, can you please che...
Patrick Plitzner
12:28 PM feature request #7301 (Worksforme): Refresh open name editors when deleting specimen used in type designation
deleting of a specimen which is used in type specimen works as aspected, but when the taxon is opened in name editor,... Katja Luther
12:30 PM bug #6668 (Closed): NPE in DetailsView when deleting a type specimen
it works, but we have to refresh the name editor otherwise the NPE of note-3 appears. Maybe we should open a new tick... Katja Luther
09:40 AM bug #6668 (Resolved): NPE in DetailsView when deleting a type specimen
Patrick Plitzner
11:51 AM bug #6838 (Resolved): Implement i18n for FeatureTreeEditor
Applied in changeset commit:taxeditor|f59b9a4e26e612e9cbe4c5440101f4772b1d324d. Patrick Plitzner
11:50 AM bug #7300 (Resolved): NPE when selecting team member after merge in bulkeditor
please review Katja Luther
11:49 AM bug #7300: NPE when selecting team member after merge in bulkeditor
this was a regression. because the session of the new search was the same as before. after saving we need a new session. Katja Luther
11:43 AM bug #7300 (Closed): NPE when selecting team member after merge in bulkeditor
Mail von Henning:
Hallo,
Jetzt habe ich Moser, G. gesucht, korrigiert, gespeichert, alle Moser, G. markiert, dedu...
Katja Luther
11:32 AM bug #6455 (Resolved): Remove not possible for country in field/derived unit details view
Applied in changeset commit:taxeditor|c092061f0b15e0a8f7e1d78822156b0ba9090596. Patrick Plitzner
11:08 AM feature request #7297: Move Misapplied name to another accepted Taxon
Different to synonyms MAN can be reused and are related via concept relationships. So this task is bit more complicat... Andreas Müller
11:07 AM feature request #7102 (Resolved): Enable EDIT and DELETE for specimen determinations
Patrick Plitzner
11:04 AM bug #6804: Order areas in Distribution Selection Editor
FR:
Ja genau, ich wollte wissen ob die Sortierung so korrekt funktioniert oder anders sein muss!
Ich habe es umge...
Andreas Müller
10:50 AM feature request #6779 (Resolved): Allow drag&drop for features in GrantedAuthority editor
Applied in changeset commit:taxeditor|dc57edc9b1ab087348d90e8c9d9fc9d08ed7f2b6. Patrick Plitzner
09:54 AM feature request #7007 (New): Migrate IMemento functionality
Patrick Plitzner
09:52 AM feature request #6931 (Resolved): Migrate uses view
Andreas, could you please review? Patrick Plitzner
09:50 AM feature request #6598: Migrate commands and handlers
This is finished when #7010 is resolved Patrick Plitzner

03/01/2018

11:44 AM feature request #7065 (Resolved): When updating a subtree the affected and opened taxa are not updated in name editor this needs to be handled
instead of updating the editorInput of the name editor, the name editors are closed and reopened, this seems to work.... Katja Luther
09:33 AM bug #7299 (New): NPE while shutdown
while closing the editor this NPE appeared:
~~~ text
login : s.wutke
editor version : 4.14.0
server : api.cyber...
Katja Luther

02/27/2018

02:46 PM bug #6389: Returning a Map in cdmlib leads to data loss
In the CacheLoader class the map was deconstructed into an array of twice the size containing keys and values alterna... Patrick Plitzner
02:30 PM bug #6389 (Resolved): Returning a Map in cdmlib leads to data loss
Applied in changeset commit:taxeditor|98baf5f86b1e6f5d3b3e1cd57b1f2907e2305eb3. Patrick Plitzner
02:17 PM bug #6389: Returning a Map in cdmlib leads to data loss
The problem has nothing to do with the deserialization but with CacheLoader.load(Map<T,T> map, List<Object> alreadyVi... Patrick Plitzner
01:54 PM bug #6389: Returning a Map in cdmlib leads to data loss
Tested serialization and deserialization for plain java with the following:
~~~java
public static void main(S...
Patrick Plitzner
12:17 PM bug #6389: Returning a Map in cdmlib leads to data loss
Patrick Plitzner wrote:
> There is no change with using `Integer.valueOf(i)`
Ok, this is good news!
Maybe it hel...
Andreas Kohlbecker
11:09 AM bug #6389: Returning a Map in cdmlib leads to data loss
There is no change with using `Integer.valueOf(i)`
Patrick Plitzner
10:46 AM bug #6389 (Feedback): Returning a Map in cdmlib leads to data loss
To me it looks like this problem is related to Spring HTTPInvoker and the serilazization/de-serialization of maps.
...
Andreas Kohlbecker
12:20 PM bug #7241 (Resolved): Missing rights are not correctly indicated in Vaadin distribution editor - flexible vaadin errorhandler is needed
Fabian Reimeier
11:32 AM bug #7241 (In Progress): Missing rights are not correctly indicated in Vaadin distribution editor - flexible vaadin errorhandler is needed
Fabian Reimeier
12:11 PM feature request #7001 (Closed): Show date and/or version-number on taxeditor download site
Andreas Kohlbecker
11:41 AM feature request #7001 (Resolved): Show date and/or version-number on taxeditor download site
Fabian Reimeier
11:40 AM bug #6804 (Resolved): Order areas in Distribution Selection Editor
Fabian Reimeier
09:54 AM feature request #7297 (New): Move Misapplied name to another accepted Taxon
For misapplied name it should be possible to move them from one Taxon to another analogue to "move synonym to another... Katja Luther

02/26/2018

06:16 PM task #7296 (Closed): externalize redmine api key
the redmine api key of the user admin is currently stored in the file `cdmlib-ext/src/test/resources/services-externa... Andreas Kohlbecker
10:27 AM bug #6804 (Feedback): Order areas in Distribution Selection Editor
Fabian Reimeier
07:46 AM feature request #5783 (Resolved): Rename demo instances back to demo I and demo II
As far as I remember, we also talked about the domain names of the servers in this context. But as this issue is only... Andreas Kohlbecker

02/23/2018

03:09 PM bug #7295 (Resolved): When creating homotypic synonym the accepted taxon and new synonym are not shown anymore
Applied in changeset commit:taxeditor|7d6f3a6a338c14c6878143d1ff2f00c36e5d6fa6. Katja Luther
03:08 PM bug #7295 (Closed): When creating homotypic synonym the accepted taxon and new synonym are not shown anymore
when creating a new homotypic synonym by using the reight click menu, the accepted taxon and the new created synonym ... Katja Luther
01:20 PM bug #7156 (Worksforme): After deleting factual data all save operations result in DataIntegrityViolationException
I could not reproduce it anymore. Katja Luther
01:17 PM feature request #5783: Rename demo instances back to demo I and demo II
Andreas, is there anything else to do to change the name in the json file? Katja Luther
12:50 PM bug #5637 (Resolved): Selecting a new name for a taxon does not update the details view
this should be fixed by the fix of #5696 Katja Luther
11:56 AM bug #5696: When selecting a new name for a given taxon the name relationships are not updated
please review Katja Luther
11:55 AM bug #5696 (Resolved): When selecting a new name for a given taxon the name relationships are not updated
Applied in changeset commit:taxeditor|cbe745d1268d88505d6bd4e7a4ec42923c227191. Katja Luther

02/22/2018

05:06 PM bug #7294 (Closed): keys block can not be disabled in tabless taxon page
Außerdem sehe ich, dass bei der untabbed Darstellung im Checklisten-Portal z.B. http://portal.cybertaxonomy.org/flor... Andreas Kohlbecker
05:03 PM bug #7293 (New): improve display of keys in tabless taxon page
ich sehe gerade bei der Flora von Cuba (z.B. http://portal.cybertaxonomy.org/flora-de-la-republica-de-cuba/cdm_data... Andreas Kohlbecker
03:14 PM feature request #7268: Re-implement own preference dialog
Patrick Plitzner wrote:
> Copied from #7007:
>
> Katja Luther wrote:
> > Opening the preferences now throws an N...
Patrick Plitzner
03:11 PM feature request #7007 (Resolved): Migrate IMemento functionality
Applied in changeset commit:taxeditor|935c0645af6942b1af9834fe6a3a78960bb1646c. Patrick Plitzner
03:08 PM bug #7292 (Closed): TaxonSelectionDialog throws error when searching for '?'
When searching for '?' in the TaxonSelectionDialog (it does not matter from where it was opened) the following except... Patrick Plitzner
03:01 PM bug #7290 (Resolved): Creating the first node in a new polytomous key throws NPE
Applied in changeset commit:taxeditor|4bf09483757553a725525563734a26473ba3e7eb. Patrick Plitzner
01:54 PM bug #7290 (Closed): Creating the first node in a new polytomous key throws NPE
1. Create new PolytomousKey
1. Create new PolytomousKeyNode -> Exception
~~~
login : admin
editor version : 4.1...
Andreas Müller
02:48 PM bug #7291 (Closed): PolytomousKey Node should not allow to search for synonym
searching for a taxon for a pk node also offers synonyms. Resulting in a CCE as synonyms are not allowed to be linked... Andreas Müller
02:15 PM bug #7289 (Closed): hibernate warning HHH90000003 pollutes log files
Andreas Müller
02:02 PM bug #7289: hibernate warning HHH90000003 pollutes log files
Well, the information given in this stack overflow post is not correct then.
Anyway I think we can close this tick...
Andreas Kohlbecker
01:36 PM bug #7289 (Feedback): hibernate warning HHH90000003 pollutes log files
We do use hibernate version 5.0.7 already. But as written in #4716 the problem still persists for hibernate-envers cl... Andreas Müller
12:03 PM bug #7289 (Closed): hibernate warning HHH90000003 pollutes log files
according to https://stackoverflow.com/questions/32181529/how-to-get-rid-of-hhh90000003-use-of-dom4j-entity-mode-is-c... Andreas Kohlbecker
01:19 PM task #7269 (In Progress): Use redmine as message hub for submitter curator communication
Andreas Kohlbecker
01:18 PM task #7269: Use redmine as message hub for submitter curator communication
Additional TODOs:
* extract interface for service
* issues must be private
* issues must only be visible to the...
Andreas Kohlbecker
12:44 PM bug #7287 (Closed): Unit tests using the DefaultTermInitializer break subsequent integration tests in the suite
Andreas Kohlbecker
12:33 PM bug #7287: Unit tests using the DefaultTermInitializer break subsequent integration tests in the suite
**The above mentioned problems where only due to a local change in `CdmTransactionalIntegrationTest` which I applied ... Andreas Kohlbecker
11:41 AM bug #7287: Unit tests using the DefaultTermInitializer break subsequent integration tests in the suite
After using the new unit test base class TermTest for all test which need the terms to be initialized another strange... Andreas Kohlbecker
12:05 PM feature request #4716: Other dependencies to be updated
can this be closed? Andreas Kohlbecker
11:37 AM bug #6219: Deleting synonym is persisted immediately, but the editor is set dirty
please review. Katja Luther
11:36 AM bug #6219 (Resolved): Deleting synonym is persisted immediately, but the editor is set dirty
Applied in changeset commit:taxeditor|0c5520e0eeb9abc0d9519f10f63f035802bde735. Katja Luther
11:01 AM feature request #6806 (Resolved): Add context menu to FeatureTreeEditor
Comment 5 and 7 are fixed. Comment 6 has already been fixed before. Patrick Plitzner
10:02 AM bug #7284: Multiple taxeditor jars created in p2 update for a single jenkins build
from Andreas K.:
Im jenkins worspace gibt es einen ordner indem sich noch immer viele artefakte ansammeln:
Ic...
Patrick Plitzner

02/21/2018

06:33 PM bug #7287: Unit tests using the DefaultTermInitializer break subsequent integration tests in the suite
affected test class files (without cdmlib-model, model has no integration tests!):
~~~
cdmlib-ext/src/test/java/e...
Andreas Kohlbecker
06:21 PM bug #7287 (Closed): Unit tests using the DefaultTermInitializer break subsequent integration tests in the suite

Here we make the distinction between Unit and integration test by the fact that integration tests are sub classing ...
Andreas Kohlbecker
06:22 PM task #7288 (New): Separate Unit and integration tests completely,
only unit test should be run by maven surefire, whereas integration test are to be run by the maven failsafe plugin.
...
Andreas Kohlbecker
06:07 PM bug #5095: Fix failing dozer related tests
the tests in
~~~
cdmlib-remote/src/test/java/eu/etaxonomy/cdm/remote/dto/assembler/lsid/AssemblerTest.java
cdmli...
Andreas Kohlbecker
06:06 PM task #7286 (Duplicate): re-enable dozer related tests
#5095 is still open, so this is a duplicate then Andreas Kohlbecker
06:03 PM task #7286 (Duplicate): re-enable dozer related tests
in order to solve #5095 the tests in
cdmlib-remote/src/test/java/eu/etaxonomy/cdm/remote/dto/assembler/lsid/Assemb...
Andreas Kohlbecker
04:35 PM feature request #7285 (Closed): Edaphobase import: implement ranks Cohort, Hyporder
For Hyporder see http://www.miketaylor.org.uk/dino/faq/s-class/levels/
Problem with cohort is that the exact posit...
Andreas Müller
04:22 PM bug #7079 (Resolved): P2 updates not found
By clearing the update site with every build (#7279) This issue seems to be solved. Patrick Plitzner
04:21 PM bug #7284 (Resolved): Multiple taxeditor jars created in p2 update for a single jenkins build
Removing -P uploadRepo -Dupdate.dir=nightly from the taxeditor-JRE-INTEGRATION solved this issue. Now there is only o... Patrick Plitzner
03:58 PM bug #7284 (Closed): Multiple taxeditor jars created in p2 update for a single jenkins build
For one execution of taxeditor-INTEGRATION there are three versions of every taxeditor jar on the update site. They a... Patrick Plitzner
03:53 PM bug #7279 (Resolved): p2 sites are extremely huge
There are multiple files but this seems to be another issue. As they are all from the current built updates should wo... Patrick Plitzner
02:45 PM bug #7279 (In Progress): p2 sites are extremely huge
There are still editor jars with multiple versions accumulating in update site:
eg:
https://cybertaxonomy.eu/down...
Andreas Kohlbecker
02:41 PM bug #7279 (Resolved): p2 sites are extremely huge
The update site is now deleted by using the `sshexec` feature of the maven wagon plugin. The goal is part of the `upl... Patrick Plitzner
11:20 AM bug #7279 (In Progress): p2 sites are extremely huge
Andreas Müller
02:40 PM bug #7239 (Resolved): Rename last name by family name and first name by "Other/given names"
Applied in changeset commit:taxeditor|d18c9390acd16d486fad48b90d7dda279f93d2f1. Katja Luther
02:18 PM task #2055 (Rejected): Improve Article creation for nomenclatural references
Some parts are implemented, some do not make sense anymore. Therefore rejected (worksforme). Andreas Müller
02:17 PM feature request #3533 (Resolved): Prefill nomenclatural reference information if possible
Katja Luther
02:07 PM feature request #3983 (Duplicate): [DISCUSS] Easier reference selection - Euro+Med sourceID
Katja Luther
02:05 PM feature request #3983 (Resolved): [DISCUSS] Easier reference selection - Euro+Med sourceID
Katja Luther
01:27 PM feature request #3983 (Closed): [DISCUSS] Easier reference selection - Euro+Med sourceID
Katja Luther
02:05 PM feature request #3989: [DISCUSS] Allow defining the vocabularies to be offered in the select dialogs
Solutions are clear. Tickets need to be created or linked. Andreas Müller
01:29 PM feature request #5687: search for alternative identifiers
check, what to copy to #7283 Andreas Müller
01:28 PM feature request #5687 (Resolved): search for alternative identifiers
Andreas Müller
01:28 PM feature request #5687 (Closed): search for alternative identifiers
Katja Luther
01:27 PM feature request #5687 (Resolved): search for alternative identifiers
Katja Luther
01:28 PM feature request #7283 (Resolved): Improvements for alternative identifier search
Make configurable via preferences.
* Allow filtering by certain identifier types #7841
* ~~In search result the a...
Andreas Müller
12:06 PM feature request #6305: [MASTER] Improve EDITOR import/export UI configuration panel for all imports/exports
Please create subtickets for all imports/exports. Change target version to "Reviewed next ...." afterwards. Andreas Müller
11:42 AM bug #6786 (Closed): Remaining feature tree editor issues
copied open issues to new ticket Andreas Müller
11:41 AM bug #7282 (Closed): Still remaining feature tree editor issues
* ~~Use right click menu for all commands. This is the standard for all editors we have, including tree editors like ... Andreas Müller
11:37 AM bug #7003 (Worksforme): endless loop with IllegalArgumentException when no active conversation is found
Reopen if necessary Andreas Müller
11:22 AM bug #7013 (Resolved): NonUniqueObjectException for setSecundumReferenceForSubtree
this should be resolved with reload of the reference Katja Luther
10:49 AM feature request #7281 (Closed): Implement bromelian import
Katja Luther

02/20/2018

07:00 PM task #7269 (Resolved): Use redmine as message hub for submitter curator communication
Applied in changeset commit:cdmlib|83d34a190ce9e9decc40866dea9c2a7b5cdf9fe8. Andreas Kohlbecker
01:21 PM feature request #7076: Add Nebula CompositeTable as direct dependency
For review try opening the GrantedAuthority editor. It is the only widget that uses this dependency Patrick Plitzner
12:11 PM bug #7079: P2 updates not found
something extremely interesting happened:
After deleting and recreating the `taxeditor/update/nightly` folder the ...
Andreas Kohlbecker
11:33 AM bug #7079: P2 updates not found
test:
1 . deleted exiting `./p2/org.eclipse.equinox.p2.repository/cache/-622154754` file which had the md5 sum: `0...
Andreas Kohlbecker
11:23 AM bug #7079: P2 updates not found
supplying some more details to the issue description ... Andreas Kohlbecker
11:58 AM bug #7279 (Closed): p2 sites are extremely huge
Sizes as seen currently:
* 22G nightly
* 9.7G stable
These folders seem to contain more files than need...
Andreas Kohlbecker

02/19/2018

05:47 PM bug #7277 (Closed): Add micrometer to MeasurmentUnit
works fine Patrick Plitzner
04:07 PM bug #7277: Add micrometer to MeasurmentUnit
please review Andreas Müller
04:05 PM bug #7277 (Resolved): Add micrometer to MeasurmentUnit
Applied in changeset commit:cdmlib|0b89a342d89273b0039d2feed87daa7b20b0dd20. Andreas Müller
04:04 PM bug #7277 (Closed): Add micrometer to MeasurmentUnit
Andreas Müller
03:28 PM feature request #7268: Re-implement own preference dialog
Copied from #7007:
Katja Luther wrote:
> Opening the preferences now throws an NPE:
>
>
> ~~~ text
> java.l...
Patrick Plitzner
02:32 PM feature request #6547: Implement excluded and unplaced in taxon navigator
now there is the excluded/update check in TaxonNodeByNameComparator, so the sorting works for the alphabetic order, t... Katja Luther
02:17 PM feature request #6547 (Resolved): Implement excluded and unplaced in taxon navigator
Applied in changeset commit:cdmlib|65107bf34868fc063c4397f965cf646cdfbe0cb0. Katja Luther
01:39 PM feature request #6547 (Feedback): Implement excluded and unplaced in taxon navigator
Reopen as sorting does not yet work with "alphabetic" sort order, only with "rank + alphabet". Andreas Müller
12:46 PM bug #6679 (Closed): search for misapplied names in portal does not work
Andreas Kohlbecker
12:30 PM bug #6679: search for misapplied names in portal does not work
This can be closed I think. Andreas Müller
12:25 PM feature request #7007: Migrate IMemento functionality
Opening the preferences now throws an NPE:
~~~ text
java.lang.Exception: login : admin
editor version : 4.15.0...
Katja Luther
12:14 PM bug #7230 (In Progress): Refresh in name editor does not work if using "reuse taxon" in Misapplied Name View (e4)
now the details view and name editor are updated, but there is still a bug in showing the taxonrelationship after the... Katja Luther
12:07 PM task #7023 (In Progress): Replace the vaadin-table of the distribution editor by vaadin-grid
Fabian Reimeier
11:59 AM feature request #7276: Make User.email a unique field.
This only makes sense if email is an obligatory field, which currently is not the case and probably also will not be ... Andreas Müller
10:22 AM feature request #7276 (In Progress): Make User.email a unique field.
Make User.email a unique field.
In the context of password recovery it seems also a requirement to make the email ...
Andreas Müller
11:55 AM bug #6804 (In Progress): Order areas in Distribution Selection Editor
Fabian Reimeier
11:24 AM feature request #7275: [DISCUSS] Require email address for Users
Andreas Müller wrote:
> As password recovery is not necessarily a feature needed for all CDM instances the necessity ...
Andreas Kohlbecker
10:05 AM feature request #7275: [DISCUSS] Require email address for Users
As password recovery is not necessarily a feature needed for all CDM instances the necessity of obligatory email need... Andreas Müller
11:16 AM feature request #7215 (Resolved): Implement pro parte misapplied names in TaxEditor
Katja Luther
 

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