Activity
From 08/10/2017 to 09/08/2017
09/08/2017
- 06:13 PM bug #6938 (Resolved): Tasks before a new Euro+Med import
- Not yet complete
see also #5082
====
check that the import is adapted such that only referenced authors and... - 02:31 PM feature request #6933: Add possibility to export only families or other part of the tree in CDM light and DwC-A export
- first implementation is available
- 10:39 AM feature request #6933: Add possibility to export only families or other part of the tree in CDM light and DwC-A export
- on CDM lib side we should use existing taxonomic filtering techniques from DwC-A export.
Also DwC-A export assiste... - 10:26 AM feature request #6933: Add possibility to export only families or other part of the tree in CDM light and DwC-A export
- and implement the configuration wizard for it
- 10:25 AM feature request #6933 (Closed): Add possibility to export only families or other part of the tree in CDM light and DwC-A export
- 01:57 PM bug #6937 (New): Check cascading of partOf named areas (throws NUOE e.g. in CoL import)
- Currently the CoL distribution import throws a NonUniqueObject exception during the 1000-2000 partition with TDWG 12 ...
- 01:37 PM bug #6936 (New): Deduplicate languages in CoL import
- same was already implemented for named areas.
Currently we have about 10000 language records most of the duplicates.... - 01:30 PM bug #6935 (New): Deduplicate distribution status in CoL
- Currently we create about 50x the status "alien". Also the status has no vocabulary yet (manually fixed in 2017 versi...
- 10:46 AM bug #6934 (New): Exports throw RemoteAccessException
- When running export functionality on larger databases (whole database) from within the TaxEditor one often gets Remot...
- 07:45 AM feature request #6932 (Closed): Migrate bulk editor
- 07:43 AM feature request #6931 (In Progress): Migrate uses view
- 06:02 AM feature request #6931 (Closed): Migrate uses view
09/07/2017
- 03:40 PM bug #6930: Tree index is null after deleting taxon and moving the children to the parent taxon
- The treeIndex should be reset during saving in saveOrUpdateListener, probably this is not called because the deleting...
- 03:18 PM bug #6930 (New): Tree index is null after deleting taxon and moving the children to the parent taxon
- steps to reproduce:
1. have a taxonomic backbone like this: Classification-> Taxon A -> Childtaxon B
1. Delete A ... - 09:53 AM feature request #6905: Migrate supplemental data view
- did you test whether the supplemental data are changed if you click on the scientific name? in my workspace it does n...
09/06/2017
- 10:58 AM feature request #6928 (Rejected): [DISCUSS] Similar methods in taxon service
- 10:36 AM feature request #6928: [DISCUSS] Similar methods in taxon service
- There is a "TODO still needed and correct?" comment on changeSynonymToRelatedTaxon javadoc. Is this still needed. Do ...
- 09:54 AM feature request #6928: [DISCUSS] Similar methods in taxon service
- changeSynonymToRelatedTaxon creates a new taxon that has a taxon relationship to the other taxon and changeSynonymToA...
- 10:34 AM feature request #6691: Implement all name types in NameDetailElement
- if the name once is set to viral, the getTaggedName method returns always null.
~~~ java
else if (nonViralName.ge...
09/05/2017
- 01:52 PM feature request #6929 (In Progress): handling of misapplied names without accepted name
- Hallo,
habe hier noch einen interessanten, bisher nicht abgedeckten Fall, der für mich aber in diese Kategorie gehör... - 10:05 AM feature request #6907: Migrate factual data view
- If you already have a descriptionelement and wants to create a new one.
- 09:42 AM feature request #6909 (In Progress): Migrate taxon navigator
09/04/2017
- 07:21 PM feature request #6928 (Rejected): [DISCUSS] Similar methods in taxon service
- what is the difference between changeSynonymToRelatedTaxon() and changeSynonymToAcceptedTaxon()
I just stumbled up... - 07:01 PM feature request #6691 (In Progress): Implement all name types in NameDetailElement
- 07:00 PM feature request #6691: Implement all name types in NameDetailElement
- Katja Luther wrote:
> Are there any special fields for fungi or viruses?
Please refere to the according interface... - 12:47 PM feature request #6691: Implement all name types in NameDetailElement
- All name types are available in drop down list. Switching between zoological and botanical codes also switching the a...
- 03:42 PM feature request #6907 (Feedback): Migrate factual data view
- Katja Luther wrote:
> clicking on new-> Distribution throws an NPE because the selection is null.
I cannot reprod... - 03:37 PM feature request #6595 (In Progress): Migrate name editor
- 03:29 PM feature request #6905: Migrate supplemental data view
- I enabled the supplemental view for selections in the details view
- 01:37 PM feature request #6927 (In Progress): The status string in distribution editor should be choosable between symbol and idInVocabulary
- now the symbol can be added to the label if it is selected in the preferences.
- 12:39 PM feature request #6722 (Resolved): Make Life-form available via DerivedUnitFacade
- life form is now available in editor.
the preference is located in serverside preferences -> specimen and observatio...
09/01/2017
- 04:55 PM bug #6798 (Duplicate): NPE when trying to drag&drop a classification to the user rights editor
- Isn't this a duplicate? Please correct me if being wrong.
- 08:28 AM bug #6798 (Rejected): NPE when trying to drag&drop a classification to the user rights editor
- this exception should not occur anymore because of the switch to the rootnode in the taxonnavigator.
- 04:46 PM feature request #6927: The status string in distribution editor should be choosable between symbol and idInVocabulary
- Using symbol might be critical as symbol is not necessarily expected to be unique. Also symbol might be expected to b...
- 04:34 PM bug #6894: NPE when trying drag&drop a Classification to the GrantedAuthority editor
- Katja Luther wrote:
> The exception is not thrwon anymore, but the type is now TaxonNode, not Classification.
Do ... - 12:05 PM bug #6813 (Feedback): Illegal Argument Exception when switching AcceptedTaxonToSynonym
- 11:11 AM bug #6730 (Resolved): Deleting media leads to inconsistent data
- now there are three options for deletion:
* only remove from gallery
* delete if not used somewhere else
* delet... - 10:33 AM bug #6797: Use short sec citation for misapplied name in NameEditor
- please review
- 10:32 AM bug #6797 (Resolved): Use short sec citation for misapplied name in NameEditor
- Applied in changeset commit:taxeditor|5d3f446277bcc5e5d59322ae3568dfcbdc38998f.
- 09:52 AM bug #6809 (Closed): Name Editor throws double selection change events
- seems to work.
- 09:44 AM bug #6799: Implement progress monitor for DwC A export
- please review
- 09:44 AM bug #6799 (Resolved): Implement progress monitor for DwC A export
- Applied in changeset commit:cdmlib|7588eacb62facab072443a1faebbaa224cf6307a.
- 08:35 AM bug #6799 (In Progress): Implement progress monitor for DwC A export
- now there is a progress monitor showing the progress for the partitioning. The % of all work is still not working.
- 07:44 AM bug #6801 (Resolved): DwCA Export is not stored at expected place
- the result is a byte array, this was not handled.
- 07:38 AM bug #6801 (In Progress): DwCA Export is not stored at expected place
08/31/2017
- 01:45 PM bug #6809 (Resolved): Name Editor throws double selection change events
- Applied in changeset commit:taxeditor|20fa89e35e3a48b063b1ea8cfd4c7e98e77a3f8a.
- 10:29 AM bug #6803: Drag&Drop in Taxon Navigator does not refresh tree correctly
- I can not reproduce this behaviour. Did you find any error in the log file?
- 10:24 AM feature request #6907: Migrate factual data view
- clicking on new-> Distribution throws an NPE because the selection is null.
- 09:37 AM bug #6159: improve distribution editor in TaxEditor
- the wizard for selection of areas should be improved.
while opening the wizard the vocabularies are not correctly ma... - 09:25 AM bug #6159: improve distribution editor in TaxEditor
- Katja Luther wrote:
> Improving the distribution editor and selection of areas used in distribution editor
Hallo,...
08/30/2017
- 03:29 PM feature request #6927 (In Progress): The status string in distribution editor should be choosable between symbol and idInVocabulary
- For projects using the status symbols for the distribution status it should be possible to show the symbol in status ...
- 03:09 PM feature request #6926: First call of NamedAreaSelectionDialog needs too much time
- please review
- 03:09 PM feature request #6926 (Resolved): First call of NamedAreaSelectionDialog needs too much time
- 03:08 PM feature request #6926 (New): First call of NamedAreaSelectionDialog needs too much time
- this seems to be fixed by removing the initModel() call from the AbstractFilteredCdmResourceSelectionDialog-Construct...
- 03:07 PM feature request #6926 (Resolved): First call of NamedAreaSelectionDialog needs too much time
- Applied in changeset commit:taxeditor|af969685c98d7f521384f5735da697ccdae67dbe.
- 02:34 PM feature request #6926 (Closed): First call of NamedAreaSelectionDialog needs too much time
- The first call of the namedAreaSelectionDialog needs quite long. This is because it loads all terms, while no selecti...
- 01:43 PM bug #6894 (Resolved): NPE when trying drag&drop a Classification to the GrantedAuthority editor
- 01:43 PM bug #6894: NPE when trying drag&drop a Classification to the GrantedAuthority editor
- the dragAssistant now check if the dragged node is the root node and then uses the classification instead of the taxo...
- 10:37 AM bug #6860 (Resolved): Use consistent calendar system for date picker
- maybe we should discuss whether ZonedDateTime is needed or it would be better to use LocalDateTime?
- 10:35 AM bug #6860: Use consistent calendar system for date picker
- now all DateTime/ZonedDateTime objects use a timezone offset of 0:00.
I already moved the dateTime objects to Zone...
08/29/2017
- 05:52 PM feature request #6925 (Closed): Migrate general framework
- 05:15 PM bug #6924 (Worksforme): Taxon name incorrect after swap synonym with accepted taxon
- After I swapped the synonym with the accepted taxon it seems like only the name has changed but not the taxon.
Befo... - 02:30 PM bug #6923 (Closed): move description to other taxon command fails in factual data view
- works fine
- 01:43 PM bug #6923 (Resolved): move description to other taxon command fails in factual data view
- please review
- 01:43 PM bug #6923 (In Progress): move description to other taxon command fails in factual data view
- the selection in this handler is not of type Description therefore we need to get the description from the featureNod...
- 02:19 PM feature request #6692 (Resolved): Make name types changeable
- please review
08/28/2017
- 02:50 PM bug #6923 (Closed): move description to other taxon command fails in factual data view
- the description parameter is null
- 02:49 PM feature request #6907: Migrate factual data view
- looks fine, but the command "move description to other taxon" fails, the description parameter is null -> new ticket ...
08/23/2017
- 02:06 PM feature request #6922 (Resolved): Migrate term editor
- Applied in changeset commit:taxeditor|e461037f6e4ea8c4a18c9a54fd564adde1d66a8f.
- 02:05 PM feature request #6922 (Closed): Migrate term editor
- 01:19 PM feature request #6920: [DISCUSS] use ZonedDateTime (java8) instead of joda time
- The only thing that I found, which is not supported is to have a partial date without a year and a day without a mont...
- 11:30 AM feature request #6920: [DISCUSS] use ZonedDateTime (java8) instead of joda time
- for the differences see:
https://stackoverflow.com/questions/24631909/differences-between-java-8-date-time-api-jav...
08/22/2017
- 03:40 PM feature request #6921 (Closed): Migrate data import views
- 03:04 PM feature request #6912 (Resolved): Migrate datasources view
- Applied in changeset commit:taxeditor|a5b67ac3d2e90ebe5c4fac0fd7d06fe22511926a.
- 02:09 PM feature request #6920 (New): [DISCUSS] use ZonedDateTime (java8) instead of joda time
- in java8 there is a new time framework (java.time.*) it is inspired by the joda framework.
- 01:03 PM bug #6828: SpecimenOrObservation and Person/Team missing in Cache updater
- Change the title of a person which is used as collector in bulk editor. Then the titleCache of the field unit needs t...
- 12:41 PM bug #6828 (Feedback): SpecimenOrObservation and Person/Team missing in Cache updater
- I am not sure how to test the titleCache generation but the code looks fine.
Is there a way to produce a "wrong" tit... - 11:17 AM bug #6828 (Resolved): SpecimenOrObservation and Person/Team missing in Cache updater
- please review
- 12:29 PM bug #6860: Use consistent calendar system for date picker
- Andreas Müller wrote:
> 1) If one uses the datepicker on a system which differs from the local date inconsistent res... - 12:04 PM feature request #6910 (Closed): Migrate referencing objects view
- 12:04 PM feature request #6910 (Resolved): Migrate referencing objects view
- works fine now.
- 11:59 AM feature request #6910: Migrate referencing objects view
- This should be fixes with commit:taxeditor|d17343e957802584789d3930f4206bd156cf97aa
- 09:32 AM feature request #6910 (Feedback): Migrate referencing objects view
- This view also does not listen on the changed selection in details view if the name is selected.
But the rest works ... - 10:57 AM bug #6813 (In Progress): Illegal Argument Exception when switching AcceptedTaxonToSynonym
- I can't reproduce this anymore, maybe it was fixed with the changes in 4.9
@AM: could you please try to reproduce i... - 09:09 AM bug #6919 (Resolved): Unprotected titleCache field is still grayed
- Applied in changeset commit:taxeditor|94d05504845df5c427bff9625a89e80e873b05d7.
- 08:36 AM bug #6919 (Closed): Unprotected titleCache field is still grayed
- After unprotect a cache field the field should not be grayed anymore
- 08:31 AM feature request #6597 (Resolved): Migrate Details View
- Katja Luther wrote:
> one open issues: the cache fields shouldn't be grayed if they are editable.
this is an old ...
08/21/2017
- 05:51 PM feature request #6907 (Resolved): Migrate factual data view
- 05:50 PM feature request #6910 (Resolved): Migrate referencing objects view
- 05:49 PM feature request #6911 (Resolved): Migrate concept view
- 02:18 PM bug #6918: Rank is always sorted by label
- please review
- 02:16 PM bug #6918 (Resolved): Rank is always sorted by label
- Applied in changeset commit:taxeditor|b32cbeab9266e20daa3f8c65ce4aad1729d98554.
- 02:08 PM bug #6918 (Closed): Rank is always sorted by label
- the preference sort order of ranks is not used anymore. For the sort order of ranks in drop down menu this preference...
08/18/2017
- 02:31 PM bug #6789 (In Progress): Remaining issues for misapplied name details view
- now it is possible to reuse an existing taxon, but the refresh problem still exist, so the taxon needs to be closed t...
- 02:29 PM feature request #6597: Migrate Details View
- Katja Luther wrote:
> The details view for misapplied names is switched back to the taxon details view.
this is f... - 01:19 PM feature request #6597: Migrate Details View
- The details view for misapplied names is switched back to the taxon details view.
- 10:40 AM feature request #6597 (Feedback): Migrate Details View
- 10:40 AM feature request #6597: Migrate Details View
- one open issues: the cache fields shouldn't be grayed if they are editable.
- 11:17 AM bug #6894 (In Progress): NPE when trying drag&drop a Classification to the GrantedAuthority editor
- The exception is not thrwon anymore, but the type is now TaxonNode, not Classification.
- 10:45 AM bug #6915 (Resolved): Delete does not work in media view for taxon
08/17/2017
- 12:49 PM bug #6915: Delete does not work in media view for taxon
- now all delete options are working, also the problem that while delete one media from a gallery removed the whole gal...
08/16/2017
- 03:31 PM feature request #6906: Migrate media view
- The media view works also for the specimen editor, but sometimes the menu does not show up or if it there, the click ...
- 12:03 PM feature request #6906 (Feedback): Migrate media view
- The media view does not work for the specimen editor
- 03:00 PM bug #6917 (Worksforme): NPE during delete of author or team in bulk editor
- Walter:
"beim Löschen eines Autors oder Teams im Bulk Editor"
login : w.berendsohn
editor version : 4... - 01:48 PM bug #6915 (Feedback): Delete does not work in media view for taxon
- Deleting works but only with the second option "Remove ... and delete teh media completely...". The other two options...
- 12:01 PM bug #6915 (Resolved): Delete does not work in media view for taxon
- this was because the object from where the media should be deleted is not set in the configurator, this is fixed with...
- 12:37 PM feature request #6905 (Feedback): Migrate supplemental data view
- when changing from taxon to name the supplemental data view still shows the taxon data
- 12:06 PM feature request #6834: [DISCUSS] add inner text to Intextreference or other ideas for easier handling of intextReferences in TaxEditor
- Andreas Müller wrote:
> More difficult is it to use 2 citations for the same text part. This is difficult to handl... - 09:27 AM feature request #6834: [DISCUSS] add inner text to Intextreference or other ideas for easier handling of intextReferences in TaxEditor
- this was the email discussion:
Nachtrag: aber ich bin da auch nicht grundsätzlich abgeneigt. Und wenn es nur zum D...
08/15/2017
- 03:01 PM feature request #6834: [DISCUSS] add inner text to Intextreference or other ideas for easier handling of intextReferences in TaxEditor
- Is the original task of this ticket still an issue. I think I send an answer once. I am not sure that we really need ...
- 02:59 PM feature request #6834: [DISCUSS] add inner text to Intextreference or other ideas for easier handling of intextReferences in TaxEditor
- Katja Luther wrote:
> Andreas Müller wrote:
> > Katja Luther wrote:
> > > We also need to discuss how we want to h... - 02:46 PM feature request #6834: [DISCUSS] add inner text to Intextreference or other ideas for easier handling of intextReferences in TaxEditor
- Andreas Müller wrote:
> Katja Luther wrote:
> > We also need to discuss how we want to handle references cited more... - 02:43 PM feature request #6834: [DISCUSS] add inner text to Intextreference or other ideas for easier handling of intextReferences in TaxEditor
- Katja Luther wrote:
> We also need to discuss how we want to handle references cited more than once in a text. Do we... - 12:49 PM feature request #6834: [DISCUSS] add inner text to Intextreference or other ideas for easier handling of intextReferences in TaxEditor
- We also need to discuss how we want to handle references cited more than once in a text. Do we have an intextReferenc...
- 02:43 PM feature request #6916 (In Progress): Link IntextReference to OriginalSource, not Reference
- Or allow both. This is in line with the general handling of sources that is planned.
- 02:35 PM feature request #6597: Migrate Details View
- Katja, can you review this first and then pass to me?
- 02:35 PM feature request #6905: Migrate supplemental data view
- Katja, can you review this first and then pass to me?
- 02:30 PM feature request #6906: Migrate media view
- Katja, can you review this first and then pass to me?
- 12:28 PM feature request #6906 (Resolved): Migrate media view
- There is still an issue with the delete handler which has nothing to do with the migration.
None of the delete optio... - 01:37 PM feature request #6485: Implement IntextReferences in TaxEditor
- A first implementation can be found in branch intextReference.
- 12:40 PM feature request #6485 (In Progress): Implement IntextReferences in TaxEditor
- 12:27 PM bug #6915 (Closed): Delete does not work in media view for taxon
- I tried to delete an image which belongs to an image gallery of a taxon.
None of the delete options of the configu... - 11:13 AM bug #6914 (In Progress): exception in bulk editor after search
- 10:29 AM bug #6914 (Closed): exception in bulk editor after search
- After searching in bulk editor an exception is thrown:
~~~
Caused by: java.lang.IllegalArgumentException: Object ...
08/14/2017
- 09:50 AM feature request #6913 (Closed): Remove e3 parts and dependencies
- 09:48 AM feature request #6912 (Closed): Migrate datasources view
- 09:48 AM feature request #6911 (Closed): Migrate concept view
- 09:47 AM feature request #6910 (Closed): Migrate referencing objects view
- 09:47 AM feature request #6909 (Closed): Migrate taxon navigator
- 09:46 AM feature request #6908 (Closed): Migrate polytomous key module
- 09:46 AM feature request #6907 (Closed): Migrate factual data view
- 09:46 AM feature request #6906 (Closed): Migrate media view
- 09:44 AM feature request #6905: Migrate supplemental data view
- Patrick Plitzner wrote:
> There is still the issue that the views are not restored. But please test the rest.
Thi... - 09:44 AM feature request #6597: Migrate Details View
- Patrick Plitzner wrote:
> There is still the issue that the views are not restored. But please test the rest.
Thi...
08/12/2017
- 11:23 PM task #6753: Edaphobase data issues before import
- Autoren mit " in "
~~~ sql
SELECT *
FROM tax_taxon
WHERE tax_author_name like '% in %'
~~~
157/71 distinkte... - 02:47 PM task #6753: Edaphobase data issues before import
- Incorrect usage of name_addition. Das Feld wird häufig für Autoren verwendet. Oder für infraspezifische Epithete: "[v...
- 02:13 PM task #6753: Edaphobase data issues before import
- Taxa mit Autor aber ohne Jahreszahl
~~~ sql
SELECT *
FROM tax_taxon
WHERE tax_year is NULL AND tax_author_name ... - 12:36 PM bug #4707 (In Progress): LSID Authority service cannot find CoL LSIDs
- 12:27 PM bug #4707: LSID Authority service cannot find CoL LSIDs
- ~~~ sql
INSERT INTO `col_test`.`LSIDAuthority` (`id`, `uuid`, `authority`, `port`) VALUES ('1', 'cab132a8-b26a-4e07-... - 12:16 PM bug #4707: LSID Authority service cannot find CoL LSIDs
- AK, now I understand the problem. There are missing entries in tables "LSIDAuthority" and "lsidauthority_namespaces"....
08/11/2017
- 01:12 PM feature request #6905 (Resolved): Migrate supplemental data view
- There is still the issue that the views are not restored. But please test the rest.
- 01:12 PM feature request #6597: Migrate Details View
- There is still the issue that the views are not restored. But please test the rest.
- 12:37 PM feature request #6597 (Resolved): Migrate Details View
08/10/2017
- 04:52 PM feature request #6905 (Closed): Migrate supplemental data view
- 12:28 PM feature request #6903 (In Progress): Requirements for checklisteditor of the German states
- GL (03.08.2017):
anbei unser Vorschlag zum Checklisteneditor der Bundesländer, sowohl Festlegungen hinsichtlich d... - 12:15 PM feature request #6902 (Closed): Migrate molecular module
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