Activity
From 07/26/2017 to 08/24/2017
08/24/2017
- 05:14 PM Revision 2f0030fa (taxeditor): ref #6912 Fix class cast exception
- 05:14 PM Revision 6ef01e0f (taxeditor): Fix potential NPE
- 05:11 PM Revision 4ff11da5 (taxeditor): ref #6595 Initial commit of migrated/refactored classes (not working)
- 01:36 PM Revision faf2ca45 (taxeditor): ref #6912 Fix class cast exception
- 01:23 PM Revision 3f2943e8 (taxeditor): Fix potential NPE
08/23/2017
- 02:06 PM feature request #6922 (Resolved): Migrate term editor
- Applied in changeset commit:taxeditor|e461037f6e4ea8c4a18c9a54fd564adde1d66a8f.
- 02:05 PM feature request #6922 (Closed): Migrate term editor
- 02:05 PM Revision e461037f (taxeditor): fix #6922 Migrate Term Editor
- 02:03 PM Revision 0d9f9636 (taxeditor): Remove unused return value
- 01:19 PM feature request #6920: [DISCUSS] use ZonedDateTime (java8) instead of joda time
- The only thing that I found, which is not supported is to have a partial date without a year and a day without a mont...
- 11:30 AM feature request #6920: [DISCUSS] use ZonedDateTime (java8) instead of joda time
- for the differences see:
https://stackoverflow.com/questions/24631909/differences-between-java-8-date-time-api-jav... - 09:06 AM Revision 34dad812 (taxeditor): ref #6913 Remove unused views from store plugin
08/22/2017
- 03:40 PM Revision 0e4f55de (taxeditor): ref #6921 Initial import of e4 classes
- 03:40 PM feature request #6921 (Closed): Migrate data import views
- 03:04 PM feature request #6912 (Resolved): Migrate datasources view
- Applied in changeset commit:taxeditor|a5b67ac3d2e90ebe5c4fac0fd7d06fe22511926a.
- 03:04 PM Revision a5b67ac3 (taxeditor): fix #6912 Migrate DataSource view
- 02:09 PM feature request #6920 (New): [DISCUSS] use ZonedDateTime (java8) instead of joda time
- in java8 there is a new time framework (java.time.*) it is inspired by the joda framework.
- 01:03 PM bug #6828: SpecimenOrObservation and Person/Team missing in Cache updater
- Change the title of a person which is used as collector in bulk editor. Then the titleCache of the field unit needs t...
- 12:41 PM bug #6828 (Feedback): SpecimenOrObservation and Person/Team missing in Cache updater
- I am not sure how to test the titleCache generation but the code looks fine.
Is there a way to produce a "wrong" tit... - 11:17 AM bug #6828 (Resolved): SpecimenOrObservation and Person/Team missing in Cache updater
- please review
- 12:29 PM bug #6860: Use consistent calendar system for date picker
- Andreas Müller wrote:
> 1) If one uses the datepicker on a system which differs from the local date inconsistent res... - 12:04 PM feature request #6910 (Closed): Migrate referencing objects view
- 12:04 PM feature request #6910 (Resolved): Migrate referencing objects view
- works fine now.
- 11:59 AM feature request #6910: Migrate referencing objects view
- This should be fixes with commit:taxeditor|d17343e957802584789d3930f4206bd156cf97aa
- 09:32 AM feature request #6910 (Feedback): Migrate referencing objects view
- This view also does not listen on the changed selection in details view if the name is selected.
But the rest works ... - 11:57 AM Revision d17343e9 (taxeditor): ref #6597 Propagate selection of details view
- 10:57 AM bug #6813 (In Progress): Illegal Argument Exception when switching AcceptedTaxonToSynonym
- I can't reproduce this anymore, maybe it was fixed with the changes in 4.9
@AM: could you please try to reproduce i... - 09:09 AM bug #6919 (Resolved): Unprotected titleCache field is still grayed
- Applied in changeset commit:taxeditor|94d05504845df5c427bff9625a89e80e873b05d7.
- 08:36 AM bug #6919 (Closed): Unprotected titleCache field is still grayed
- After unprotect a cache field the field should not be grayed anymore
- 09:09 AM Revision 94d05504 (taxeditor): fix #6919:toggleableTextFields should have default color if not protected
- 08:31 AM feature request #6597 (Resolved): Migrate Details View
- Katja Luther wrote:
> one open issues: the cache fields shouldn't be grayed if they are editable.
this is an old ...
08/21/2017
- 05:51 PM feature request #6907 (Resolved): Migrate factual data view
- 05:50 PM feature request #6910 (Resolved): Migrate referencing objects view
- 05:49 PM feature request #6911 (Resolved): Migrate concept view
- 05:48 PM Revision 9ad85674 (taxeditor): ref #6911 Migrate concept view
- 05:48 PM Revision 43966327 (taxeditor): ref #6907 remove unused exception
- 05:48 PM Revision 3b4a059e (taxeditor): ref #6908 #6907 refactor abstract viewer class
- 02:58 PM Revision fc9d508f (taxeditor): ref #6692: update content after change name type
- 02:27 PM Revision a4fdf878 (taxeditor): ref #6692: make nomenclatural code editable
- 02:18 PM bug #6918: Rank is always sorted by label
- please review
- 02:16 PM bug #6918 (Resolved): Rank is always sorted by label
- Applied in changeset commit:taxeditor|b32cbeab9266e20daa3f8c65ce4aad1729d98554.
- 02:08 PM bug #6918 (Closed): Rank is always sorted by label
- the preference sort order of ranks is not used anymore. For the sort order of ranks in drop down menu this preference...
- 02:15 PM Revision b32cbeab (taxeditor): fix #6918: use comparator in rank combobox if sortRankHierarchically is set
- 12:51 PM Revision 3c6ff11f (taxeditor): ref #6910 Fix "Open in..." for referencing objects view
- 12:51 PM Revision 2d1c0ebb (taxeditor): ref #6910 Migrate referencing objects view
- 12:51 PM Revision bb83ab52 (taxeditor): ref #6598 Do not show menu items when not connected
- 12:51 PM Revision 7cce7fa3 (taxeditor): ref #6907 Disable move description operations for specimen editor
- 12:51 PM Revision b99a3ada (taxeditor): ref #6907, #6906 Remove multi-select from media and factual data view
- 10:00 AM Revision 23e50194 (cdmlib): fix bug in sortindex updater
08/18/2017
- 02:46 PM Revision 8ed512e9 (taxeditor): minor
- 02:31 PM bug #6789 (In Progress): Remaining issues for misapplied name details view
- now it is possible to reuse an existing taxon, but the refresh problem still exist, so the taxon needs to be closed t...
- 02:29 PM feature request #6597: Migrate Details View
- Katja Luther wrote:
> The details view for misapplied names is switched back to the taxon details view.
this is f... - 01:19 PM feature request #6597: Migrate Details View
- The details view for misapplied names is switched back to the taxon details view.
- 10:40 AM feature request #6597 (Feedback): Migrate Details View
- 10:40 AM feature request #6597: Migrate Details View
- one open issues: the cache fields shouldn't be grayed if they are editable.
- 02:26 PM Revision c2b6c2d3 (taxeditor): fix details view for misapplied names and add choosable taxon for misapplied name relationsip
- 11:17 AM bug #6894 (In Progress): NPE when trying drag&drop a Classification to the GrantedAuthority editor
- The exception is not thrwon anymore, but the type is now TaxonNode, not Classification.
- 11:17 AM Revision 1d45fffd (taxeditor): ref #6894: fix drag&drop in grantedAuthority view for classification
- 10:45 AM bug #6915 (Resolved): Delete does not work in media view for taxon
08/17/2017
- 01:26 PM Revision cfc11510 (cdmlib): minor
- 01:19 PM Revision b3d82392 (cdmlib): minor
- 12:49 PM bug #6915: Delete does not work in media view for taxon
- now all delete options are working, also the problem that while delete one media from a gallery removed the whole gal...
- 12:43 PM Revision 9d368a18 (cdmlib): fix media delete, remove descriptionElement from description if it does not contain any media anymore
08/16/2017
- 04:34 PM Revision 0619074d (taxeditor): ref #6907 Filter menu item visibility
- 03:31 PM feature request #6906: Migrate media view
- The media view works also for the specimen editor, but sometimes the menu does not show up or if it there, the click ...
- 12:03 PM feature request #6906 (Feedback): Migrate media view
- The media view does not work for the specimen editor
- 03:14 PM Revision 1118cbec (cdmlib): improve delete of shared media
- 03:00 PM bug #6917 (Worksforme): NPE during delete of author or team in bulk editor
- Walter:
"beim Löschen eines Autors oder Teams im Bulk Editor"
login : w.berendsohn
editor version : 4... - 02:46 PM Revision 2965ad0f (taxeditor): ref #6907 Show factual data for derivatives
- 01:48 PM bug #6915 (Feedback): Delete does not work in media view for taxon
- Deleting works but only with the second option "Remove ... and delete teh media completely...". The other two options...
- 12:01 PM bug #6915 (Resolved): Delete does not work in media view for taxon
- this was because the object from where the media should be deleted is not set in the configurator, this is fixed with...
- 12:37 PM feature request #6905 (Feedback): Migrate supplemental data view
- when changing from taxon to name the supplemental data view still shows the taxon data
- 12:06 PM feature request #6834: [DISCUSS] add inner text to Intextreference or other ideas for easier handling of intextReferences in TaxEditor
- Andreas Müller wrote:
> More difficult is it to use 2 citations for the same text part. This is difficult to handl... - 09:27 AM feature request #6834: [DISCUSS] add inner text to Intextreference or other ideas for easier handling of intextReferences in TaxEditor
- this was the email discussion:
Nachtrag: aber ich bin da auch nicht grundsätzlich abgeneigt. Und wenn es nur zum D... - 11:05 AM Revision b6610f12 (taxeditor): Merge branch 'develop' into intextReference
- 11:01 AM Revision 9ef7ae67 (taxeditor): ref #6907 Fix NPE in move factual data operations
- 10:42 AM Revision 87626c45 (taxeditor): fix media deletion config wizard for media should be deleted if not used somewhere else
- 09:50 AM Revision b294e97e (taxeditor): the deleteConfig for media needs the description from where it should be deleted.
- 09:50 AM Revision e3d544f0 (taxeditor): fix delete media configuration wizard
08/15/2017
- 07:07 PM Revision 860fc861 (taxeditor): ref #6907 Migrate factual data view
- 07:04 PM Revision f4d81062 (taxeditor): ref #6598 Implement IPostOperationEnabled for operation support
- 07:03 PM Revision 8377acc4 (taxeditor): Remove unused method parameter
- 07:00 PM Revision 18c27bb3 (taxeditor): Externalizing model strings
- 03:01 PM feature request #6834: [DISCUSS] add inner text to Intextreference or other ideas for easier handling of intextReferences in TaxEditor
- Is the original task of this ticket still an issue. I think I send an answer once. I am not sure that we really need ...
- 02:59 PM feature request #6834: [DISCUSS] add inner text to Intextreference or other ideas for easier handling of intextReferences in TaxEditor
- Katja Luther wrote:
> Andreas Müller wrote:
> > Katja Luther wrote:
> > > We also need to discuss how we want to h... - 02:46 PM feature request #6834: [DISCUSS] add inner text to Intextreference or other ideas for easier handling of intextReferences in TaxEditor
- Andreas Müller wrote:
> Katja Luther wrote:
> > We also need to discuss how we want to handle references cited more... - 02:43 PM feature request #6834: [DISCUSS] add inner text to Intextreference or other ideas for easier handling of intextReferences in TaxEditor
- Katja Luther wrote:
> We also need to discuss how we want to handle references cited more than once in a text. Do we... - 12:49 PM feature request #6834: [DISCUSS] add inner text to Intextreference or other ideas for easier handling of intextReferences in TaxEditor
- We also need to discuss how we want to handle references cited more than once in a text. Do we have an intextReferenc...
- 02:43 PM feature request #6916 (In Progress): Link IntextReference to OriginalSource, not Reference
- Or allow both. This is in line with the general handling of sources that is planned.
- 02:35 PM feature request #6597: Migrate Details View
- Katja, can you review this first and then pass to me?
- 02:35 PM feature request #6905: Migrate supplemental data view
- Katja, can you review this first and then pass to me?
- 02:30 PM feature request #6906: Migrate media view
- Katja, can you review this first and then pass to me?
- 12:28 PM feature request #6906 (Resolved): Migrate media view
- There is still an issue with the delete handler which has nothing to do with the migration.
None of the delete optio... - 01:40 PM Revision 58a9767c (taxeditor): remove the remove button for the selection and first implementation for removing intext reference
- 01:37 PM feature request #6485: Implement IntextReferences in TaxEditor
- A first implementation can be found in branch intextReference.
- 12:40 PM feature request #6485 (In Progress): Implement IntextReferences in TaxEditor
- 12:35 PM Revision 050c492f (taxeditor): ref #6598 Fix recursion of parts in save handler
- 12:27 PM bug #6915 (Closed): Delete does not work in media view for taxon
- I tried to delete an image which belongs to an image gallery of a taxon.
None of the delete options of the configu... - 12:22 PM Revision 7defd830 (taxeditor): fix problem of html parsing
- 12:15 PM Revision f80666d1 (taxeditor): ref #6906 Fix delete handler
- 11:13 AM bug #6914 (In Progress): exception in bulk editor after search
- 10:29 AM bug #6914 (Closed): exception in bulk editor after search
- After searching in bulk editor an exception is thrown:
~~~
Caused by: java.lang.IllegalArgumentException: Object ... - 11:06 AM Revision 8f6d819a (taxeditor): ref #6906 Fix selection for supplemental, details and descriptive view
- 11:06 AM Revision 6221b263 (taxeditor): ref #6906 Fix move operation
- 11:06 AM Revision e6aba306 (taxeditor): ref #6906 Migrate media view context menu
- 11:06 AM Revision f7be0793 (taxeditor): Add icons to menu items
- 11:06 AM Revision 5d6060ad (taxeditor): ref #6906 Migrate media view
- 11:06 AM Revision 2443233c (taxeditor): ref #6905, #6597 viewer handling
- 11:06 AM Revision b8e0aa81 (taxeditor): ref #6905, #6597 Move part initialisation to sub classes
- 10:48 AM Revision c5cb62ac (taxeditor): minor
- 10:18 AM Revision bda4bda9 (taxeditor): minor
- 10:03 AM Revision 9f65ce1c (cdmlib): ref #6828:adapt cache updater to work for specimenOrObservationBase
- 09:55 AM Revision b0b118a7 (taxeditor): add i18N file changes for repair wizard
- 09:53 AM Revision 2fe99213 (taxeditor): add specimen, person and team cache updater to admin menu
- 09:51 AM Revision 1051997a (taxeditor): revert the changes in MANIFEST.MF for richtext
- 09:39 AM Revision ed086ede (taxeditor): rcp target with nebula latest version
08/14/2017
- 10:27 AM Revision f66fa2d3 (taxeditor): merge target for richtext and 4.9
- 10:23 AM Revision 61ca7567 (taxeditor): smaller changes in AbstractFormSection
- 10:14 AM Revision d8513bcb (taxeditor): add nebula richtext to target plattform
- 09:50 AM feature request #6913 (Closed): Remove e3 parts and dependencies
- 09:48 AM feature request #6912 (Closed): Migrate datasources view
- 09:48 AM feature request #6911 (Closed): Migrate concept view
- 09:47 AM feature request #6910 (Closed): Migrate referencing objects view
- 09:47 AM feature request #6909 (Closed): Migrate taxon navigator
- 09:46 AM feature request #6908 (Closed): Migrate polytomous key module
- 09:46 AM feature request #6907 (Closed): Migrate factual data view
- 09:46 AM feature request #6906 (Closed): Migrate media view
- 09:44 AM feature request #6905: Migrate supplemental data view
- Patrick Plitzner wrote:
> There is still the issue that the views are not restored. But please test the rest.
Thi... - 09:44 AM feature request #6597: Migrate Details View
- Patrick Plitzner wrote:
> There is still the issue that the views are not restored. But please test the rest.
Thi... - 09:43 AM Revision 15376c80 (taxeditor): ref #6905, #6597 Restore details and supplemental view
- 09:42 AM Revision 4b40006d (taxeditor): ref #6905, #6597 Fix potential NPE
- 09:42 AM Revision 25593544 (taxeditor): ref #6905, #6597 Adjust visibility
08/12/2017
- 11:23 PM task #6753: Edaphobase data issues before import
- Autoren mit " in "
~~~ sql
SELECT *
FROM tax_taxon
WHERE tax_author_name like '% in %'
~~~
157/71 distinkte... - 02:47 PM task #6753: Edaphobase data issues before import
- Incorrect usage of name_addition. Das Feld wird häufig für Autoren verwendet. Oder für infraspezifische Epithete: "[v...
- 02:13 PM task #6753: Edaphobase data issues before import
- Taxa mit Autor aber ohne Jahreszahl
~~~ sql
SELECT *
FROM tax_taxon
WHERE tax_year is NULL AND tax_author_name ... - 12:36 PM bug #4707 (In Progress): LSID Authority service cannot find CoL LSIDs
- 12:27 PM bug #4707: LSID Authority service cannot find CoL LSIDs
- ~~~ sql
INSERT INTO `col_test`.`LSIDAuthority` (`id`, `uuid`, `authority`, `port`) VALUES ('1', 'cab132a8-b26a-4e07-... - 12:16 PM bug #4707: LSID Authority service cannot find CoL LSIDs
- AK, now I understand the problem. There are missing entries in tables "LSIDAuthority" and "lsidauthority_namespaces"....
08/11/2017
- 01:12 PM feature request #6905 (Resolved): Migrate supplemental data view
- There is still the issue that the views are not restored. But please test the rest.
- 01:12 PM feature request #6597: Migrate Details View
- There is still the issue that the views are not restored. But please test the rest.
- 12:37 PM feature request #6597 (Resolved): Migrate Details View
- 01:00 PM Revision eff541be (taxeditor): ref #6905, #6597 Fix potential NPE
- 12:36 PM Revision 3c2b5bba (taxeditor): ref #6905, #6597 further improvement on selection evaluation
- 11:40 AM Revision a4980826 (taxeditor): ref #6905, #6597 refactor selectionChanged() method
- 11:28 AM Revision 6f5407a6 (taxeditor): ref #6905, #6597 Allow saving of editor when view is active
08/10/2017
- 07:19 PM Revision 9da8ddff (taxeditor): ref #6905, #6597 Propagate selection for supplemental data view
- 07:12 PM Revision a6d63028 (taxeditor): ref #6905, #6597 Extract super class for details and supplemental viewer
- 05:26 PM Revision 361f170d (taxeditor): ref #6905 Migrate supplemental data view
- 04:52 PM feature request #6905 (Closed): Migrate supplemental data view
- 04:46 PM Revision e634e646 (taxeditor): ref #6597 Move abstract class to super package
- 04:36 PM Revision 1919a29d (taxeditor): Merge branch 'develop' into detailsE4
- 02:12 PM Revision 61650dda (taxeditor): ref #6902 migrate remaining context menu items for molecular module
- 02:12 PM Revision dc7ba15a (taxeditor): ref #6902 Migrate sequence editing menu item
- 01:56 PM Revision 28e32c3d (taxeditor): Merge branch 'hotfix/4.9.2' into develop
- 01:56 PM Revision 86d420d2 (taxeditor): Merge branch 'hotfix/4.9.2'
- 12:28 PM feature request #6903 (In Progress): Requirements for checklisteditor of the German states
- GL (03.08.2017):
anbei unser Vorschlag zum Checklisteneditor der Bundesländer, sowohl Festlegungen hinsichtlich d... - 12:19 PM Revision b2ccfb06 (taxeditor): ref #6897 Remove wrong exclude property
- 12:18 PM Revision 58c4d154 (taxeditor): ref #6897 Merge duplicate Messages.java
- 12:18 PM Revision 1f8c9bfb (taxeditor): fix #6897 Add missing Messages.java to build properties
- 12:17 PM Revision b632fb88 (taxeditor): ref #6781 Replace nebula update site with 2016 archived one
- 12:15 PM feature request #6902 (Closed): Migrate molecular module
- 11:37 AM Revision 247f11cf (taxeditor): Updated version in pom / project files to taxeditor version : 4.9.2 and cdmlib version : 4.9.0
- 10:08 AM Revision 9c4df5f5 (taxeditor): ref #6597 Remove debug info
08/09/2017
- 05:25 PM Revision 9e2ac218 (taxeditor): ref #6597 Fix potential endless loop
- 05:03 PM Revision 6b82400a (taxeditor): ref #6597 Enhance selection handling for DetailsView
- 03:06 PM task #6901 (New): Test if Polygone is a possible alternative in architecture (Composite oriented programming)
- See https://polygene.apache.org/java/latest/intro.html
And the tutorials at https://polygene.apache.org/java/late... - 02:47 PM Revision aa691e28 (taxeditor): Merge branch 'develop' into detailsE4
- 02:12 PM bug #6900 (New): Handle virus names correctly in CoL
- Virus names are not handled correctly in the CoL DwCA as genus names have a ":" at the end and fields like specific e...
- 02:09 PM bug #6899 (New): Genus names have empty protected authorshipcache (CoL)
- Genuses and probably other names have no authors. These are currently stored as empty (but not null) authorship cache...
- 02:05 PM feature request #6898: Implement stable identifiers for CoL import
- GfBio: „wenn Andreas anbietet, dass die UUIDs mittels des LSIDs stabil gehalten werden können, dann sollte das gemach...
- 02:04 PM feature request #6898 (New): Implement stable identifiers for CoL import
- The only stable identifiers we currently have are the CoL LSIDs. Neither names nor taxa have stable CDM identifiers.
... - 01:27 PM Revision 4af01069 (taxeditor): ref #6897 Remove wrong exclude property
- 01:17 PM Revision 8163568c (taxeditor): ref #6897 Merge duplicate Messages.java
- 12:15 PM bug #6897 (Resolved): i18n Messages.java files are missing in the build version
- Applied in changeset commit:taxeditor|44bfbe55b9a2f47a25914f06954094e7fd72bd8c.
- 12:13 PM bug #6897 (Closed): i18n Messages.java files are missing in the build version
- 12:14 PM Revision 44bfbe55 (taxeditor): fix #6897 Add missing Messages.java to build properties
- 12:03 PM bug #6781 (Resolved): Automatic update does not work anymore for TaxEditor
- I updated my week-old nightly (02.08) to the current version (08.08) and it worked. This did not succeed before the c...
- 11:27 AM bug #6896 (Worksforme): date selection corrupted
- issue has already been fixed with Hotfix 4.9.1
08/07/2017
- 08:27 PM bug #6896 (Feedback): date selection corrupted
- Hi Tilo,
please update to the latest TaxEditor version 4.9.1 and refer to the release notes:
~~~
Dear TaxEdito... - 04:18 PM bug #6896 (Worksforme): date selection corrupted
- The date selection tool in the details field for media derivatives (and likely other) shows june if july is selected....
- 04:15 PM bug #6895 (New): specimen tab display
- The specimen tab in the portal shows only three of the numerous derivatives (here: media, SEM-Images) attached to a s...
- 02:37 PM bug #6894 (Closed): NPE when trying drag&drop a Classification to the GrantedAuthority editor
- This is critical because adding to full classification as a GrantedAuthority is a standard usecase. ~~Maybe this got ...
- 12:33 PM Revision 567de3cd (cdmlib): Revert "ref #6886 test to repoduce issue with users having only CREATE permission"
- This reverts commit 3795d1bf926c9b126317a85d880235301a0a4b16.
- 11:23 AM bug #6892 (New): Further improvements to CoL performance
- To further improve the CoL import performance we could
* improve synonym import
* add parentFk by SQL (rememb...
08/05/2017
- 11:16 PM bug #6891 (New): Handle ambiguous synonym in CoL
- In CoL some synonyms have status "ambiguous synonym". This is not yet handled in import.
Probably we should make t... - 05:21 PM feature request #6890 (New): Deduplicate supplemental data during deduplication
- Currently supplemental data is aggregated during deduplication. But if it is exactly equal (e.g. with same marker typ...
- 02:03 PM feature request #6878: choose a base font for the portal and deliver it from the drupal module or theme
- @AK - Looks good on test.e-taxonomy.eu (but I don't know how to "pass the ticket back")
- 11:19 AM bug #6889 (New): results in user bulk edito are not sorted
- one would expect an alphabetic sorting (or the sort by dropdown beside "Search" should allow multiple vales)
- 10:42 AM bug #6888 (New): Deduplicate persons in CoL/DwCA import
- Currently person (and especially name authors) are not deduplicated yet (but there is a doDeduplication flag for the...
- 10:37 AM feature request #6887 (In Progress): Some attributes are still missing in CoL import
- 01:28 AM feature request #6887 (In Progress): Some attributes are still missing in CoL import
- Some fields in taxa.txt
* ~~Identifier if not LSID~~
* ~~isExtinct~~
* references
* ~~modified~~ !!
* des... - 01:39 AM Revision 0a5679a4 (cdmlib): ref #6887 and ref #5173 improve area handling for CoL distribution import
- 01:39 AM Revision cf60f92a (cdmlib): ref #6887 handle non LSID identifiers in CoL import
- 01:39 AM Revision 441eb4b5 (cdmlib): ref #6887 handle languages in DwCA CoL import
- 01:39 AM Revision 44fc1b63 (cdmlib): ref #6887 add description.txt to CoL import
- * add DISTRIBUTION_GENERAL to Feature static methods
* import fields with default values - 01:39 AM Revision 29024880 (cdmlib): cleanup
08/04/2017
- 01:15 PM Revision 3795d1bf (cdmlib): ref #6886 test to repoduce issue with users having only CREATE permission
- 01:09 PM bug #6886: Entity creation for users having only CREATE may fail in long running conversations
- I attempted to write a test to reproduce this issue but had other problems which prevented me from completing this te...
- 12:59 PM bug #6886 (Duplicate): Entity creation for users having only CREATE may fail in long running conversations
- I observed the following problems while implementing the ExtendedCreatePermissionManager for #6867
when this seq... - 12:25 PM bug #6885 (New): UserService.loadUserByUsername() cannot find user in long running session
- When UserService.loadUserByUsername() in a long running session which is managed through the ConversationHolder, the ...
- 10:59 AM Revision 7c353bbe (cdm-dataportal): Merge tag '4.9.1' into develop
- tag for hotfix 4.9.1
- 10:58 AM Revision 814f818e (cdm-dataportal): Merge branch 'hotfix/4.9.1'
- 10:23 AM feature request #6878: choose a base font for the portal and deliver it from the drupal module or theme
- Not sure how I can test it. I looked at http://test.e-taxonomy.eu/dataportal/preview/salvador/cdm_dataportal/taxon/7b...
- 09:21 AM feature request #6884 (New): Use stable UUIDs for CoL import
- We should try to keep UUIDs from one CoL version to the next.
Stable IDs could be mapped against CoL LSIDs (withou... - 12:06 AM bug #6883 (New): DwC-A common name language and area import (for CoL)
- Many common names in CoL have languages or locality. Currently they are not yet imported.
~~~ sql
SELECT *
FROM ...
08/03/2017
- 09:03 PM task #6882 (Closed): Document CoL import, how to
- Dokumentation on how to run a new Catalogue of Life import is available at [[CoL_Import_Dokumentation]]
(how to cr... - 08:32 PM feature request #6865: [DISCUSS] Separator for Code and Accession Number
- NK:
Great, ":" as separator seems to me the best solution for this common problem with the barcode citation of ver... - 07:32 PM Revision 5017de26 (cdmlib): ref #6880 fix seiralizable problem for new HibernateConfiguration
- 05:08 PM Revision 4bb21e4f (cdmlib): fix compilation issue in PartitionableConverterBase
- 04:23 PM Revision f0d88d76 (cdmlib): fix inadequate logging in stream partitioner
- 04:10 PM Revision df0829ae (cdmlib-apps): ref #6880 switch of auditing for CoL import
- 04:07 PM feature request #6880 (Resolved): Allow removing auditing from imports
- Applied in changeset commit:cdmlib|a006a5d4c6af5f09f89998d43ed7d80567b18c34.
- 12:37 PM feature request #6880 (Closed): Allow removing auditing from imports
- An import like CoL is purely for reading and not for editing. Therefore we do not need any auditing.
Are there any... - 04:07 PM Revision a006a5d4 (cdmlib): fix #6880 allow explicitly define hibernate configurations in applicationController
- * e.g. switch of auditing for long running imports
- 04:04 PM Revision 337563aa (cdmlib): cleanup
- 01:34 PM task #6879: Update uuid and name for admin user group
- Andreas Kohlbecker wrote:
> Shouldn't this be handled in the FistdataInserter?
Hmm, I don't know. It is only rele... - 11:04 AM task #6879: Update uuid and name for admin user group
- Shouldn't this be handled in the FistdataInserter?
- 09:27 AM task #6879 (In Progress): Update uuid and name for admin user group
- 09:24 AM task #6879 (Closed): Update uuid and name for admin user group
- A new default permission group "Admin" exists since 4.10 (#6856). We need to update all existing "admin" groups to us...
- 01:23 PM bug #6881: permgen error after changing datasource twice
- from AK:
this is for sure a problem in the taxeditor:
When changing the datasource without stopping and resta... - 01:23 PM bug #6881 (New): permgen error after changing datasource twice
- This ticket was created as #5713 more than a year ago but then accidentely deleted. Here it is again:
changing t... - 12:51 PM bug #5063 (Closed): Fix CoL import (split in parts++)
- auditing issue was moved to new ticket
08/02/2017
- 11:32 PM Revision 1eaef993 (cdmlib): cleanup
- 09:12 PM bug #5063 (In Progress): Fix CoL import (split in parts++)
- 09:10 PM bug #6494 (In Progress): Fix null titleCache for CoL import
- 09:09 PM Revision c03af146 (cdmlib): ref #5713 fix #5713 (partly or fully)
- 09:08 PM Revision 0d6a5e24 (cdmlib): cleanup
- 08:19 PM bug #4707 (Resolved): LSID Authority service cannot find CoL LSIDs
- This seems to be fixed. I just run the import and all LSID fields seem to be filled for accepted taxa. Please check a...
- 07:00 PM feature request #6878: choose a base font for the portal and deliver it from the drupal module or theme
- please review!
- 06:59 PM feature request #6878 (Resolved): choose a base font for the portal and deliver it from the drupal module or theme
- Applied in changeset commit:cdm-dataportal|57a7a95942d4be58f00bacd695b27d622e8d4e89.
- 06:52 PM feature request #6878: choose a base font for the portal and deliver it from the drupal module or theme
- Droid Sans seems to be a much better option than DejaVu. Especially the bold font face is much better readable.
I ... - 04:13 PM feature request #6878 (Closed): choose a base font for the portal and deliver it from the drupal module or theme
- The currently configured fonts for the zen-dataportal theme are
~~~
Verdana,Tahoma,"DejaVu Sans",sans-serif:
~~~... - 06:59 PM Revision 57a7a959 (cdm-dataportal): fix #6878 providing droid sans and droid sans mono as webfont and using them as default
- 06:06 PM Revision cfd4c9cb (cdmlib-apps): ref #6792 fix latest issues in SalvadorSpecimenImport
- 06:03 PM Revision d8f27ab2 (cdmlib-apps): adapt EuroMedActivator to latest changes in cdmlib
- 06:02 PM Revision 206c3bbb (cdmlib-apps): cleanup
- 06:01 PM Revision dbc3c30c (cdmlib-apps): move SalvadorActivators
- 05:54 PM bug #6877: links to synonyms not working when portal in tabbed mode without separate synonymy part/tab
- yes please!
- 05:33 PM bug #6877: links to synonyms not working when portal in tabbed mode without separate synonymy part/tab
- to be reviewed?
- 04:12 PM bug #6877 (Resolved): links to synonyms not working when portal in tabbed mode without separate synonymy part/tab
- Applied in changeset commit:cdm-dataportal|3e6dfbb357354aa07468fd65d00f58971fc35c78.
- 03:37 PM bug #6877 (Closed): links to synonyms not working when portal in tabbed mode without separate synonymy part/tab
- reported by a.mueller:
> wenn ich bei Salvador nach Ilex johnstonii suche und dann auf das Ergebnis klicke,
> Ers... - 05:49 PM Revision 5dc25a7d (cdm-dataportal): ref #6877 fetch full media object to compensate bug in portal/taxon/{uuid}/media
- 05:44 PM Revision cd9d6a50 (cdmlib): cleanup
- 04:12 PM Revision 3e6dfbb3 (cdm-dataportal): fix #6877
- 02:17 PM Revision 77123730 (taxeditor): cleanup and deproxy
- 12:49 PM Revision 64cd247e (cdmlib): ref #6684 handle casting and null for preferred media part
- 12:48 PM Revision 922939ec (cdmlib): cleanup
- 12:43 PM Revision 9647928a (taxeditor): Fix potential NPE
- 12:32 PM Revision d1fca1f9 (taxeditor): Fix potential NPE
- 12:25 PM bug #6876: switch button of media view is too small and not at the expected place
- The me
- 11:57 AM bug #6876 (New): switch button of media view is too small and not at the expected place
- Andreas:
>Ich sehe gerade, dass das Change View Type icon für Media manchmal quasi verschwindet. Sollt... - 12:17 PM Revision 6d3302a5 (taxeditor): ref #6781 Replace nebula update site with 2016 archived one
- 10:45 AM Revision a2effde9 (cdmlib): cleanup
- 10:20 AM Revision e834dd85 (cdmlib): cleanup
- 10:20 AM Revision ebdb4fa1 (cdmlib): fix potential NPE
- 09:21 AM Revision d91c3db0 (taxeditor): Add javadoc
- 09:16 AM bug #6875 (Resolved): Duplicate menu in search result view
- Applied in changeset commit:taxeditor|422157cd8a146bd0e575167f54c46456ec824bf0.
- 09:15 AM bug #6875 (Closed): Duplicate menu in search result view
- 09:15 AM Revision 422157cd (taxeditor): fix #6875 Fix duplicate menu items in context menu
08/01/2017
- 05:58 PM feature request #6824 (Closed): Mapping for Salvador areas
- Copied open issue to new ticket #6874
- 05:57 PM feature request #6874 (New): Find better maps for salvador
- The borders of the currently used maps (c_america_level_1) do not match very well with the borders of the back ground...
- 04:10 PM bug #6684: Use media representation which best fits the available viewport size for the Image Overlay
- Hi Andreas,
this is solved, please do the review.
Andreas - 04:09 PM bug #6684 (Resolved): Use media representation which best fits the available viewport size for the Image Overlay
- Applied in changeset commit:cdm-dataportal|207acc486c14ff87bf11960e786bf4bf02dbdcd5.
- 04:09 PM Revision 207acc48 (cdm-dataportal): fix #6684 using high quality images for the lightbox overlay
- 03:26 PM feature request #6873 (New): different media captions for search results thumbnail images, Default Image Viewer and Taxon/Images tab
* Search results thumbnail images
* preferably no caption. The captions can be disabled in the settings: `/admin/...- 02:47 PM bug #6872 (Worksforme): Specimen editor does not enable save icon when editing
- Andreas M.: "Konkret habe ich in Salvador testweise einigen Specime Accession Numbers oder Barcodes zugefügt."
- 02:34 PM feature request #6871 (Closed): TaxonNameEditor modes for basionym, replaced synonym and validation
- The TaxonNameEditor currently offers a checkbox which enables the fields related to basionyms. These fields are hidde...
- 02:34 PM feature request #6870 (New): Further specimen table issues
- A couple of smaller issues with the specimen table has already been fixed in #6816. There are few more.
1. The sor... - 02:19 PM feature request #6869 (Closed): Reference editor: Advanced mode only available for curators
- Only curators must be able to use the advanced mode of the Reference Editor. By this submitters are forced to enter a...
- 02:19 PM bug #6816: [Dataportal] Specimen table issues
- All the rest works as expected.
- 01:32 PM bug #6816 (Feedback): [Dataportal] Specimen table issues
- >Vielleicht könnte man das Ganze dann auch noch ein bisschen einrücken, da es ja eine Information ist, die zu dem ein...
- 01:22 PM bug #6816: [Dataportal] Specimen table issues
- >Sowieso sollten diese Specimenseiten m.E. so ausgebaut werden, dass dort mehr oder weniger alle Specimen Information...
- 01:59 PM bug #6861: Number format exception in BHL Query when detail is not a pure number
- a) Link only to publication, not to page
b) Calculate page by using a function like the Val(string) function in VB f... - 01:57 PM Revision 2837fda6 (cdmlib): cleanup
- 01:50 PM Revision e2467e27 (cdm-vaadin): adapting to changes constant name
- 01:38 PM feature request #6867 (Closed): explicitely assign and revoke UPDATE & DELETE permission per enitity in the registration workflow
- After an in depth discussion in #4305 we decided that for phyconbank the strategy **D)** (per instance UPDATE & DELET...
- 01:29 PM feature request #6866: Improve specimen page
- Also the title needs to be improved, for the given example it is "Specimen LAGU" which could be improved.
- 01:21 PM feature request #6866 (Closed): Improve specimen page
- The pure specimen pages in the data portal need to be improved. Currently they show only basic and concatenated infor...
- 01:29 PM feature request #4305: newly created entities must stay editable even if a user only has the permission to create them
- After an in depth discussion we decided that for phyconbank the strategy **D)** (per instance UPDATE & DELETE permiss...
- 01:17 PM feature request #6865: [DISCUSS] Separator for Code and Accession Number
- I agree with Walter, adding a ":" after the herbarium code would be the easiest.
- 01:01 PM feature request #6865 (Closed): [DISCUSS] Separator for Code and Accession Number
- WGB:
TitleCache: Ich würde ein Satzzeichen zwischen Herbarangabe und die dortige ID setzen, also statt (B B 10 001... - 10:24 AM Revision 8afd66b3 (cdm-dataportal): ref #6840 adapt some German translations to context
- 09:49 AM task #6864 (Duplicate): [DISCUSS] Title and titleCache in Media
- We do have title and titleCache in Media. We need to discuss how these 2 work together when editing, importing, searc...
- 09:41 AM bug #6863 (New): Incorrect formatting for created (and updated) in supplemental data view
- A date like 2017-04-06 21:02:52 (Salvador.Media.id=10) is shown as 2017-4-6 21:2 in the supplemental data view.
W...
07/31/2017
- 08:45 PM bug #6296: Simple search for common names returns duplicates
- if not, please open new ticket with remaining issues
- 08:44 PM bug #6296: Simple search for common names returns duplicates
- Andreas K, could you please review if this is fully fixed now?
- 08:22 PM task #3249: [DISCUSS] Free text search for specimen details
- remove redundant dataportal tag
- 08:20 PM feature request #6616: Question/Discussion: update supported jquery version and remove old/unused js code?
- remove redundant dataportal tag
- 08:14 PM bug #6862: Supplemental data view is grey when editing images in specimen tree editor
- A workaround is to edit the media in the media bulk editor (before oder after adding them to the specimen), but this ...
- 08:13 PM bug #6862 (Worksforme): Supplemental data view is grey when editing images in specimen tree editor
- What I did:
* open specimen tree editor
* run search
* select a field unit and add an image gallery and a new im... - 06:49 PM bug #6861: Number format exception in BHL Query when detail is not a pure number
- The reason is that the BHL query tries to find the correct page by computing the offset. This is not possible if deta...
- 06:46 PM bug #6861 (New): Number format exception in BHL Query when detail is not a pure number
- Hallo,
im Details view, Name, protologue – Knopf Query BHL kommt untenst. Fehler.
HG
Walter
~~~
login : w.ber... - 04:55 PM feature request #6840 (In Progress): Translate dataportal to German
- 04:54 PM feature request #6840: Translate dataportal to German
- A first German version is now available. Could you please try to install on one of the redlist data portals for testing.
- 04:53 PM feature request #6840: Translate dataportal to German
- AK:
Voilá:
https://dev.e-taxonomy.eu/redmine/projects/edit/repository/cdm-dataportal/revisions/2ba9f91d33cacb... - 04:51 PM Revision a16b56ce (cdm-dataportal): ref #6840 translating dataportal to German / all terms also translated in Spanish
- 03:50 PM feature request #6658: Make mediaCreated editable in Media view
- I don't understand why you moved this to 4.10 (98% seems to be implemented in 4.8 therefore we should keep it there f...
- 03:50 PM bug #6860 (Closed): Use consistent calendar system for date picker
- 1) If one uses the datepicker on a system which differs from the local date inconsistent results show up.
E.g. if ... - 09:48 AM feature request #6856 (Resolved): Add group Admin to standard FirstDataInserter
- Applied in changeset commit:cdmlib|c819a3e41645574134e9ab955ecdcf0aa674b34b.
- 09:48 AM Revision c819a3e4 (cdmlib): fix #6856 adding group Admin to FirstDataInserter
- 09:41 AM bug #6859: DerivedUnitFacade.newFacadeFrom() fails when occurrenceUuid references a FieldUnit
- Hallo,
dem was Patrick geschrieben hat schließe ich mich weitgehend an, aber wenn an die Konstruktoren der Derive... - 09:40 AM bug #6859: DerivedUnitFacade.newFacadeFrom() fails when occurrenceUuid references a FieldUnit
- Hallo,
ich verstehe das nicht ganz. Es ist doch genau anders herum: FieldUnit wird hier nicht abgedeckt, aber Medi... - 09:40 AM bug #6859: DerivedUnitFacade.newFacadeFrom() fails when occurrenceUuid references a FieldUnit
- Hallo Andreas, Patrick
Wir (AK + ich) hatten uns das ja vorhin angeschaut, dass Walters jetzige Bilder Fehle... - 09:39 AM bug #6859 (New): DerivedUnitFacade.newFacadeFrom() fails when occurrenceUuid references a FieldUnit
07/28/2017
- 03:25 PM feature request #6840: Translate dataportal to German
- AK:
wir sollten das so, wie schon auch beider Übersetzung ins Spanische machen.
Die Übersetzter bekommen http... - 01:39 PM bug #6858 (New): Rename advanced search tabs (inluding Spanisch translation)
- WGB:
Advanced Search page:
beide Tabs würde ich nicht nur übersetzen, sondern (wohl auch im Englischen) ändern:... - 12:43 PM Revision a2a5d590 (taxeditor): Merge branch 'hotfix/4.9.1' into develop
- 12:43 PM Revision 72ab22c8 (taxeditor): Merge branch 'hotfix/4.9.1'
- 12:27 PM Revision 6166b89a (taxeditor): ref #6658 remove 1 when mapping joda.DateTime.month to swt.DateTime (II)
- 12:27 PM Revision eeaf7d09 (taxeditor): ref #6658 remove 1 when mapping joda.DateTime.month to swt.DateTime
- 12:27 PM Revision 47d343d2 (taxeditor): cleanup
- 12:27 PM Revision 31829828 (taxeditor): Fix potential NPE when no session is active when opening specimen editor
- 12:27 PM Revision 132e1b1e (taxeditor): add 1 to the month to get the right date out of the swt.DateTime
- 12:14 PM Revision e8dbfe22 (taxeditor): Updated version in pom / project files to taxeditor version : 4.9.1 and cdmlib version : 4.9.0
- 12:03 PM Revision b18418d0 (taxeditor): ref #6658 remove 1 when mapping joda.DateTime.month to swt.DateTime (II)
- 12:03 PM Revision d6e1f8a2 (taxeditor): cleanup
- 11:47 AM feature request #6658: Make mediaCreated editable in Media view
- you also need to substract 1 when reading joda.DateTime to swt.DateTime. Otherwise you increase existing data by 1 mo...
- 11:39 AM Revision 754477ec (taxeditor): ref #6658 remove 1 when mapping joda.DateTime.month to swt.DateTime
- 11:36 AM Revision c892e881 (taxeditor): cleanup
07/27/2017
- 05:05 PM task #6841: [DISCUSS] Correct use of MediaSpecimen and derivates
- Andreas Müller wrote:
> WGB (2017-07-22):
>
> ich bin unterwegs, Diskussionsbeitrag also per Email.
> Ich entne... - 04:40 PM task #6841: [DISCUSS] Correct use of MediaSpecimen and derivates
- TH (2017-07-24):
MediaSpecimen wurde ja v.a. “erfunden” um der Notwendigkeit Rechnung zu tragen, dass der Typus in... - 04:39 PM task #6841: [DISCUSS] Correct use of MediaSpecimen and derivates
- WGB (2017-07-22):
ich bin unterwegs, Diskussionsbeitrag also per Email.
Ich entnehme dem Post von Andreas, dass ... - 11:30 AM feature request #6856 (Closed): Add group Admin to standard FirstDataInserter
- A group Admin is in most cases required. The group should have the right "Role_ADMIN".
- 10:50 AM Revision 6f5e1f0c (cdm-vaadin): ref #6852 using the DummyDataInserter to avoid NPEs in the Spring ApplicationListener intitialization
- 10:48 AM Revision be10b621 (cdmlib): ref #6852 introducing a DummyDataInserter to be used instead of null
07/26/2017
- 03:04 PM feature request #4305: newly created entities must stay editable even if a user only has the permission to create them
- After sleeping one night over it, i came to the following conclusions:
* A) This approach is not appropriate in t... - 02:33 PM Revision b10dc109 (cdm-vaadin): dropping InactiveUIException
- 12:28 PM bug #6787 (Resolved): NPE when opening Specimen Tree Editor
- fixed with commit:taxeditor|8e0843b5e8f840b1cbac15a7edfba2816ea39aeb
- 12:19 PM Revision 8e0843b5 (taxeditor): Fix potential NPE when no session is active when opening specimen editor
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