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From 07/17/2017 to 08/15/2017

08/15/2017

07:07 PM Revision 860fc861 (taxeditor): ref #6907 Migrate factual data view
Patrick Plitzner
07:04 PM Revision f4d81062 (taxeditor): ref #6598 Implement IPostOperationEnabled for operation support
Patrick Plitzner
07:03 PM Revision 8377acc4 (taxeditor): Remove unused method parameter
Patrick Plitzner
07:00 PM Revision 18c27bb3 (taxeditor): Externalizing model strings
Patrick Plitzner
03:01 PM feature request #6834: [DISCUSS] add inner text to Intextreference or other ideas for easier handling of intextReferences in TaxEditor
Is the original task of this ticket still an issue. I think I send an answer once. I am not sure that we really need ... Andreas Müller
02:59 PM feature request #6834: [DISCUSS] add inner text to Intextreference or other ideas for easier handling of intextReferences in TaxEditor
Katja Luther wrote:
> Andreas Müller wrote:
> > Katja Luther wrote:
> > > We also need to discuss how we want to h...
Andreas Müller
02:46 PM feature request #6834: [DISCUSS] add inner text to Intextreference or other ideas for easier handling of intextReferences in TaxEditor
Andreas Müller wrote:
> Katja Luther wrote:
> > We also need to discuss how we want to handle references cited more...
Katja Luther
02:43 PM feature request #6834: [DISCUSS] add inner text to Intextreference or other ideas for easier handling of intextReferences in TaxEditor
Katja Luther wrote:
> We also need to discuss how we want to handle references cited more than once in a text. Do we...
Andreas Müller
12:49 PM feature request #6834: [DISCUSS] add inner text to Intextreference or other ideas for easier handling of intextReferences in TaxEditor
We also need to discuss how we want to handle references cited more than once in a text. Do we have an intextReferenc... Katja Luther
02:43 PM feature request #6916 (In Progress): Link IntextReference to OriginalSource, not Reference
Or allow both. This is in line with the general handling of sources that is planned. Andreas Müller
02:35 PM feature request #6597: Migrate Details View
Katja, can you review this first and then pass to me? Andreas Müller
02:35 PM feature request #6905: Migrate supplemental data view
Katja, can you review this first and then pass to me? Andreas Müller
02:30 PM feature request #6906: Migrate media view
Katja, can you review this first and then pass to me? Andreas Müller
12:28 PM feature request #6906 (Resolved): Migrate media view
There is still an issue with the delete handler which has nothing to do with the migration.
None of the delete optio...
Patrick Plitzner
01:40 PM Revision 58a9767c (taxeditor): remove the remove button for the selection and first implementation for removing intext reference
Katja Luther
01:37 PM feature request #6485: Implement IntextReferences in TaxEditor
A first implementation can be found in branch intextReference. Katja Luther
12:40 PM feature request #6485 (In Progress): Implement IntextReferences in TaxEditor
Katja Luther
12:35 PM Revision 050c492f (taxeditor): ref #6598 Fix recursion of parts in save handler
Patrick Plitzner
12:27 PM bug #6915 (Closed): Delete does not work in media view for taxon
I tried to delete an image which belongs to an image gallery of a taxon.
None of the delete options of the configu...
Patrick Plitzner
12:22 PM Revision 7defd830 (taxeditor): fix problem of html parsing
Katja Luther
12:15 PM Revision f80666d1 (taxeditor): ref #6906 Fix delete handler
Patrick Plitzner
11:13 AM bug #6914 (In Progress): exception in bulk editor after search
Patrick Plitzner
10:29 AM bug #6914 (Closed): exception in bulk editor after search
After searching in bulk editor an exception is thrown:
~~~
Caused by: java.lang.IllegalArgumentException: Object ...
Katja Luther
11:06 AM Revision 8f6d819a (taxeditor): ref #6906 Fix selection for supplemental, details and descriptive view
Patrick Plitzner
11:06 AM Revision 6221b263 (taxeditor): ref #6906 Fix move operation
Patrick Plitzner
11:06 AM Revision e6aba306 (taxeditor): ref #6906 Migrate media view context menu
Patrick Plitzner
11:06 AM Revision f7be0793 (taxeditor): Add icons to menu items
Patrick Plitzner
11:06 AM Revision 5d6060ad (taxeditor): ref #6906 Migrate media view
Patrick Plitzner
11:06 AM Revision 2443233c (taxeditor): ref #6905, #6597 viewer handling
Patrick Plitzner
11:06 AM Revision b8e0aa81 (taxeditor): ref #6905, #6597 Move part initialisation to sub classes
Patrick Plitzner
10:48 AM Revision c5cb62ac (taxeditor): minor
Katja Luther
10:18 AM Revision bda4bda9 (taxeditor): minor
Katja Luther
10:03 AM Revision 9f65ce1c (cdmlib): ref #6828:adapt cache updater to work for specimenOrObservationBase
Katja Luther
09:55 AM Revision b0b118a7 (taxeditor): add i18N file changes for repair wizard
Katja Luther
09:53 AM Revision 2fe99213 (taxeditor): add specimen, person and team cache updater to admin menu
Katja Luther
09:51 AM Revision 1051997a (taxeditor): revert the changes in MANIFEST.MF for richtext
Katja Luther
09:39 AM Revision ed086ede (taxeditor): rcp target with nebula latest version
Katja Luther

08/14/2017

10:27 AM Revision f66fa2d3 (taxeditor): merge target for richtext and 4.9
Katja Luther
10:23 AM Revision 61ca7567 (taxeditor): smaller changes in AbstractFormSection
Katja Luther
10:14 AM Revision d8513bcb (taxeditor): add nebula richtext to target plattform
Katja Luther
09:50 AM feature request #6913 (Closed): Remove e3 parts and dependencies
Patrick Plitzner
09:48 AM feature request #6912 (Closed): Migrate datasources view
Patrick Plitzner
09:48 AM feature request #6911 (Closed): Migrate concept view
Patrick Plitzner
09:47 AM feature request #6910 (Closed): Migrate referencing objects view
Patrick Plitzner
09:47 AM feature request #6909 (Closed): Migrate taxon navigator
Patrick Plitzner
09:46 AM feature request #6908 (Closed): Migrate polytomous key module
Patrick Plitzner
09:46 AM feature request #6907 (Closed): Migrate factual data view
Patrick Plitzner
09:46 AM feature request #6906 (Closed): Migrate media view
Patrick Plitzner
09:44 AM feature request #6905: Migrate supplemental data view
Patrick Plitzner wrote:
> There is still the issue that the views are not restored. But please test the rest.
Thi...
Patrick Plitzner
09:44 AM feature request #6597: Migrate Details View
Patrick Plitzner wrote:
> There is still the issue that the views are not restored. But please test the rest.
Thi...
Patrick Plitzner
09:43 AM Revision 15376c80 (taxeditor): ref #6905, #6597 Restore details and supplemental view
Patrick Plitzner
09:42 AM Revision 4b40006d (taxeditor): ref #6905, #6597 Fix potential NPE
Patrick Plitzner
09:42 AM Revision 25593544 (taxeditor): ref #6905, #6597 Adjust visibility
Patrick Plitzner

08/12/2017

11:23 PM task #6753: Edaphobase data issues before import
Autoren mit " in "
~~~ sql
SELECT *
FROM tax_taxon
WHERE tax_author_name like '% in %'
~~~
157/71 distinkte...
Andreas Müller
02:47 PM task #6753: Edaphobase data issues before import
Incorrect usage of name_addition. Das Feld wird häufig für Autoren verwendet. Oder für infraspezifische Epithete: "[v... Andreas Müller
02:13 PM task #6753: Edaphobase data issues before import
Taxa mit Autor aber ohne Jahreszahl
~~~ sql
SELECT *
FROM tax_taxon
WHERE tax_year is NULL AND tax_author_name ...
Andreas Müller
12:36 PM bug #4707 (In Progress): LSID Authority service cannot find CoL LSIDs
Andreas Müller
12:27 PM bug #4707: LSID Authority service cannot find CoL LSIDs
~~~ sql
INSERT INTO `col_test`.`LSIDAuthority` (`id`, `uuid`, `authority`, `port`) VALUES ('1', 'cab132a8-b26a-4e07-...
Andreas Müller
12:16 PM bug #4707: LSID Authority service cannot find CoL LSIDs
AK, now I understand the problem. There are missing entries in tables "LSIDAuthority" and "lsidauthority_namespaces".... Andreas Müller

08/11/2017

01:12 PM feature request #6905 (Resolved): Migrate supplemental data view
There is still the issue that the views are not restored. But please test the rest. Patrick Plitzner
01:12 PM feature request #6597: Migrate Details View
There is still the issue that the views are not restored. But please test the rest. Patrick Plitzner
12:37 PM feature request #6597 (Resolved): Migrate Details View
Patrick Plitzner
01:00 PM Revision eff541be (taxeditor): ref #6905, #6597 Fix potential NPE
Patrick Plitzner
12:36 PM Revision 3c2b5bba (taxeditor): ref #6905, #6597 further improvement on selection evaluation
Patrick Plitzner
11:40 AM Revision a4980826 (taxeditor): ref #6905, #6597 refactor selectionChanged() method
Patrick Plitzner
11:28 AM Revision 6f5407a6 (taxeditor): ref #6905, #6597 Allow saving of editor when view is active
Patrick Plitzner

08/10/2017

07:19 PM Revision 9da8ddff (taxeditor): ref #6905, #6597 Propagate selection for supplemental data view
Patrick Plitzner
07:12 PM Revision a6d63028 (taxeditor): ref #6905, #6597 Extract super class for details and supplemental viewer
Patrick Plitzner
05:26 PM Revision 361f170d (taxeditor): ref #6905 Migrate supplemental data view
Patrick Plitzner
04:52 PM feature request #6905 (Closed): Migrate supplemental data view
Patrick Plitzner
04:46 PM Revision e634e646 (taxeditor): ref #6597 Move abstract class to super package
Patrick Plitzner
04:36 PM Revision 1919a29d (taxeditor): Merge branch 'develop' into detailsE4
Patrick Plitzner
02:12 PM Revision 61650dda (taxeditor): ref #6902 migrate remaining context menu items for molecular module
Patrick Plitzner
02:12 PM Revision dc7ba15a (taxeditor): ref #6902 Migrate sequence editing menu item
Patrick Plitzner
01:56 PM Revision 28e32c3d (taxeditor): Merge branch 'hotfix/4.9.2' into develop
jenkins
01:56 PM Revision 86d420d2 (taxeditor): Merge branch 'hotfix/4.9.2'
jenkins
12:28 PM feature request #6903 (In Progress): Requirements for checklisteditor of the German states
GL (03.08.2017):
anbei unser Vorschlag zum Checklisteneditor der Bundesländer, sowohl Festlegungen hinsichtlich d...
Agnes Kirchhoff
12:19 PM Revision b2ccfb06 (taxeditor): ref #6897 Remove wrong exclude property
Patrick Plitzner
12:18 PM Revision 58c4d154 (taxeditor): ref #6897 Merge duplicate Messages.java
Patrick Plitzner
12:18 PM Revision 1f8c9bfb (taxeditor): fix #6897 Add missing Messages.java to build properties
Patrick Plitzner
12:17 PM Revision b632fb88 (taxeditor): ref #6781 Replace nebula update site with 2016 archived one
Patrick Plitzner
12:15 PM feature request #6902 (Closed): Migrate molecular module
Patrick Plitzner
11:37 AM Revision 247f11cf (taxeditor): Updated version in pom / project files to taxeditor version : 4.9.2 and cdmlib version : 4.9.0
jenkins
10:08 AM Revision 9c4df5f5 (taxeditor): ref #6597 Remove debug info
Patrick Plitzner

08/09/2017

05:25 PM Revision 9e2ac218 (taxeditor): ref #6597 Fix potential endless loop
Patrick Plitzner
05:03 PM Revision 6b82400a (taxeditor): ref #6597 Enhance selection handling for DetailsView
Patrick Plitzner
03:06 PM task #6901 (New): Test if Polygone is a possible alternative in architecture (Composite oriented programming)
See https://polygene.apache.org/java/latest/intro.html
And the tutorials at https://polygene.apache.org/java/late...
Andreas Müller
02:47 PM Revision aa691e28 (taxeditor): Merge branch 'develop' into detailsE4
Patrick Plitzner
02:12 PM bug #6900 (New): Handle virus names correctly in CoL
Virus names are not handled correctly in the CoL DwCA as genus names have a ":" at the end and fields like specific e... Andreas Müller
02:09 PM bug #6899 (New): Genus names have empty protected authorshipcache (CoL)
Genuses and probably other names have no authors. These are currently stored as empty (but not null) authorship cache... Andreas Müller
02:05 PM feature request #6898: Implement stable identifiers for CoL import
GfBio: „wenn Andreas anbietet, dass die UUIDs mittels des LSIDs stabil gehalten werden können, dann sollte das gemach... Andreas Müller
02:04 PM feature request #6898 (New): Implement stable identifiers for CoL import
The only stable identifiers we currently have are the CoL LSIDs. Neither names nor taxa have stable CDM identifiers.
...
Andreas Müller
01:27 PM Revision 4af01069 (taxeditor): ref #6897 Remove wrong exclude property
Patrick Plitzner
01:17 PM Revision 8163568c (taxeditor): ref #6897 Merge duplicate Messages.java
Patrick Plitzner
12:15 PM bug #6897 (Resolved): i18n Messages.java files are missing in the build version
Applied in changeset commit:taxeditor|44bfbe55b9a2f47a25914f06954094e7fd72bd8c. Patrick Plitzner
12:13 PM bug #6897 (Closed): i18n Messages.java files are missing in the build version
Patrick Plitzner
12:14 PM Revision 44bfbe55 (taxeditor): fix #6897 Add missing Messages.java to build properties
Patrick Plitzner
12:03 PM bug #6781 (Resolved): Automatic update does not work anymore for TaxEditor
I updated my week-old nightly (02.08) to the current version (08.08) and it worked. This did not succeed before the c... Patrick Plitzner
11:27 AM bug #6896 (Worksforme): date selection corrupted
issue has already been fixed with Hotfix 4.9.1 Patrick Plitzner

08/07/2017

08:27 PM bug #6896 (Feedback): date selection corrupted
Hi Tilo,
please update to the latest TaxEditor version 4.9.1 and refer to the release notes:
~~~
Dear TaxEdito...
Andreas Müller
04:18 PM bug #6896 (Worksforme): date selection corrupted
The date selection tool in the details field for media derivatives (and likely other) shows june if july is selected.... Tilo Henning
04:15 PM bug #6895 (New): specimen tab display
The specimen tab in the portal shows only three of the numerous derivatives (here: media, SEM-Images) attached to a s... Tilo Henning
02:37 PM bug #6894 (Closed): NPE when trying drag&drop a Classification to the GrantedAuthority editor
This is critical because adding to full classification as a GrantedAuthority is a standard usecase. ~~Maybe this got ... Andreas Müller
12:33 PM Revision 567de3cd (cdmlib): Revert "ref #6886 test to repoduce issue with users having only CREATE permission"
This reverts commit 3795d1bf926c9b126317a85d880235301a0a4b16. Andreas Kohlbecker
11:23 AM bug #6892 (New): Further improvements to CoL performance
To further improve the CoL import performance we could
* improve synonym import
* add parentFk by SQL (rememb...
Andreas Müller

08/05/2017

11:16 PM bug #6891 (New): Handle ambiguous synonym in CoL
In CoL some synonyms have status "ambiguous synonym". This is not yet handled in import.
Probably we should make t...
Andreas Müller
05:21 PM feature request #6890 (New): Deduplicate supplemental data during deduplication
Currently supplemental data is aggregated during deduplication. But if it is exactly equal (e.g. with same marker typ... Andreas Müller
02:03 PM feature request #6878: choose a base font for the portal and deliver it from the drupal module or theme
@AK - Looks good on test.e-taxonomy.eu (but I don't know how to "pass the ticket back") Walter Berendsohn
11:19 AM bug #6889 (New): results in user bulk edito are not sorted
one would expect an alphabetic sorting (or the sort by dropdown beside "Search" should allow multiple vales) Andreas Müller
10:42 AM bug #6888 (New): Deduplicate persons in CoL/DwCA import
Currently person (and especially name authors) are not deduplicated yet (but there is a doDeduplication flag for the... Andreas Müller
10:37 AM feature request #6887 (In Progress): Some attributes are still missing in CoL import
Andreas Müller
01:28 AM feature request #6887 (In Progress): Some attributes are still missing in CoL import
Some fields in taxa.txt
* ~~Identifier if not LSID~~
* ~~isExtinct~~
* references
* ~~modified~~ !!
* des...
Andreas Müller
01:39 AM Revision 0a5679a4 (cdmlib): ref #6887 and ref #5173 improve area handling for CoL distribution import
Andreas Müller
01:39 AM Revision cf60f92a (cdmlib): ref #6887 handle non LSID identifiers in CoL import
Andreas Müller
01:39 AM Revision 441eb4b5 (cdmlib): ref #6887 handle languages in DwCA CoL import
Andreas Müller
01:39 AM Revision 44fc1b63 (cdmlib): ref #6887 add description.txt to CoL import
* add DISTRIBUTION_GENERAL to Feature static methods
* import fields with default values
Andreas Müller
01:39 AM Revision 29024880 (cdmlib): cleanup
Andreas Müller

08/04/2017

01:15 PM Revision 3795d1bf (cdmlib): ref #6886 test to repoduce issue with users having only CREATE permission
Andreas Kohlbecker
01:09 PM bug #6886: Entity creation for users having only CREATE may fail in long running conversations
I attempted to write a test to reproduce this issue but had other problems which prevented me from completing this te... Andreas Kohlbecker
12:59 PM bug #6886 (Duplicate): Entity creation for users having only CREATE may fail in long running conversations
I observed the following problems while implementing the ExtendedCreatePermissionManager for #6867
when this seq...
Andreas Kohlbecker
12:25 PM bug #6885 (New): UserService.loadUserByUsername() cannot find user in long running session
When UserService.loadUserByUsername() in a long running session which is managed through the ConversationHolder, the ... Andreas Kohlbecker
10:59 AM Revision 7c353bbe (cdm-dataportal): Merge tag '4.9.1' into develop
tag for hotfix 4.9.1 Andreas Kohlbecker
10:58 AM Revision 814f818e (cdm-dataportal): Merge branch 'hotfix/4.9.1'
Andreas Kohlbecker
10:23 AM feature request #6878: choose a base font for the portal and deliver it from the drupal module or theme
Not sure how I can test it. I looked at http://test.e-taxonomy.eu/dataportal/preview/salvador/cdm_dataportal/taxon/7b... Andreas Müller
09:21 AM feature request #6884 (New): Use stable UUIDs for CoL import
We should try to keep UUIDs from one CoL version to the next.
Stable IDs could be mapped against CoL LSIDs (withou...
Andreas Müller
12:06 AM bug #6883 (New): DwC-A common name language and area import (for CoL)
Many common names in CoL have languages or locality. Currently they are not yet imported.
~~~ sql
SELECT *
FROM ...
Andreas Müller

08/03/2017

09:03 PM task #6882 (Closed): Document CoL import, how to
Dokumentation on how to run a new Catalogue of Life import is available at [[CoL_Import_Dokumentation]]
(how to cr...
Andreas Müller
08:32 PM feature request #6865: [DISCUSS] Separator for Code and Accession Number
NK:
Great, ":" as separator seems to me the best solution for this common problem with the barcode citation of ver...
Andreas Müller
07:32 PM Revision 5017de26 (cdmlib): ref #6880 fix seiralizable problem for new HibernateConfiguration
Andreas Müller
05:08 PM Revision 4bb21e4f (cdmlib): fix compilation issue in PartitionableConverterBase
Andreas Müller
04:23 PM Revision f0d88d76 (cdmlib): fix inadequate logging in stream partitioner
Andreas Müller
04:10 PM Revision df0829ae (cdmlib-apps): ref #6880 switch of auditing for CoL import
Andreas Müller
04:07 PM feature request #6880 (Resolved): Allow removing auditing from imports
Applied in changeset commit:cdmlib|a006a5d4c6af5f09f89998d43ed7d80567b18c34. Andreas Müller
12:37 PM feature request #6880 (Closed): Allow removing auditing from imports
An import like CoL is purely for reading and not for editing. Therefore we do not need any auditing.
Are there any...
Andreas Müller
04:07 PM Revision a006a5d4 (cdmlib): fix #6880 allow explicitly define hibernate configurations in applicationController
* e.g. switch of auditing for long running imports Andreas Müller
04:04 PM Revision 337563aa (cdmlib): cleanup
Andreas Müller
01:34 PM task #6879: Update uuid and name for admin user group
Andreas Kohlbecker wrote:
> Shouldn't this be handled in the FistdataInserter?
Hmm, I don't know. It is only rele...
Andreas Müller
11:04 AM task #6879: Update uuid and name for admin user group
Shouldn't this be handled in the FistdataInserter? Andreas Kohlbecker
09:27 AM task #6879 (In Progress): Update uuid and name for admin user group
Andreas Müller
09:24 AM task #6879 (Closed): Update uuid and name for admin user group
A new default permission group "Admin" exists since 4.10 (#6856). We need to update all existing "admin" groups to us... Andreas Müller
01:23 PM bug #6881: permgen error after changing datasource twice
from AK:
this is for sure a problem in the taxeditor:
When changing the datasource without stopping and resta...
Andreas Müller
01:23 PM bug #6881 (New): permgen error after changing datasource twice
This ticket was created as #5713 more than a year ago but then accidentely deleted. Here it is again:
changing t...
Andreas Müller
12:51 PM bug #5063 (Closed): Fix CoL import (split in parts++)
auditing issue was moved to new ticket Andreas Müller

08/02/2017

11:32 PM Revision 1eaef993 (cdmlib): cleanup
Andreas Müller
09:12 PM bug #5063 (In Progress): Fix CoL import (split in parts++)
Andreas Müller
09:10 PM bug #6494 (In Progress): Fix null titleCache for CoL import
Andreas Müller
09:09 PM Revision c03af146 (cdmlib): ref #5713 fix #5713 (partly or fully)
Andreas Müller
09:08 PM Revision 0d6a5e24 (cdmlib): cleanup
Andreas Müller
08:19 PM bug #4707 (Resolved): LSID Authority service cannot find CoL LSIDs
This seems to be fixed. I just run the import and all LSID fields seem to be filled for accepted taxa. Please check a... Andreas Müller
07:00 PM feature request #6878: choose a base font for the portal and deliver it from the drupal module or theme
please review! Andreas Kohlbecker
06:59 PM feature request #6878 (Resolved): choose a base font for the portal and deliver it from the drupal module or theme
Applied in changeset commit:cdm-dataportal|57a7a95942d4be58f00bacd695b27d622e8d4e89. Andreas Kohlbecker
06:52 PM feature request #6878: choose a base font for the portal and deliver it from the drupal module or theme
Droid Sans seems to be a much better option than DejaVu. Especially the bold font face is much better readable.
I ...
Andreas Kohlbecker
04:13 PM feature request #6878 (Closed): choose a base font for the portal and deliver it from the drupal module or theme
The currently configured fonts for the zen-dataportal theme are
~~~
Verdana,Tahoma,"DejaVu Sans",sans-serif:
~~~...
Andreas Kohlbecker
06:59 PM Revision 57a7a959 (cdm-dataportal): fix #6878 providing droid sans and droid sans mono as webfont and using them as default
Andreas Kohlbecker
06:06 PM Revision cfd4c9cb (cdmlib-apps): ref #6792 fix latest issues in SalvadorSpecimenImport
Andreas Müller
06:03 PM Revision d8f27ab2 (cdmlib-apps): adapt EuroMedActivator to latest changes in cdmlib
Andreas Müller
06:02 PM Revision 206c3bbb (cdmlib-apps): cleanup
Andreas Müller
06:01 PM Revision dbc3c30c (cdmlib-apps): move SalvadorActivators
Andreas Müller
05:54 PM bug #6877: links to synonyms not working when portal in tabbed mode without separate synonymy part/tab
yes please! Andreas Kohlbecker
05:33 PM bug #6877: links to synonyms not working when portal in tabbed mode without separate synonymy part/tab
to be reviewed? Andreas Müller
04:12 PM bug #6877 (Resolved): links to synonyms not working when portal in tabbed mode without separate synonymy part/tab
Applied in changeset commit:cdm-dataportal|3e6dfbb357354aa07468fd65d00f58971fc35c78. Andreas Kohlbecker
03:37 PM bug #6877 (Closed): links to synonyms not working when portal in tabbed mode without separate synonymy part/tab
reported by a.mueller:
> wenn ich bei Salvador nach Ilex johnstonii suche und dann auf das Ergebnis klicke,
> Ers...
Andreas Kohlbecker
05:49 PM Revision 5dc25a7d (cdm-dataportal): ref #6877 fetch full media object to compensate bug in portal/taxon/{uuid}/media
Andreas Kohlbecker
05:44 PM Revision cd9d6a50 (cdmlib): cleanup
Andreas Müller
04:12 PM Revision 3e6dfbb3 (cdm-dataportal): fix #6877
Andreas Kohlbecker
02:17 PM Revision 77123730 (taxeditor): cleanup and deproxy
Andreas Müller
12:49 PM Revision 64cd247e (cdmlib): ref #6684 handle casting and null for preferred media part
Andreas Müller
12:48 PM Revision 922939ec (cdmlib): cleanup
Andreas Müller
12:43 PM Revision 9647928a (taxeditor): Fix potential NPE
Patrick Plitzner
12:32 PM Revision d1fca1f9 (taxeditor): Fix potential NPE
Patrick Plitzner
12:25 PM bug #6876: switch button of media view is too small and not at the expected place
The me Patrick Plitzner
11:57 AM bug #6876 (New): switch button of media view is too small and not at the expected place
Andreas:

>Ich sehe gerade, dass das Change View Type icon für Media manchmal quasi verschwindet. Sollt...
Patrick Plitzner
12:17 PM Revision 6d3302a5 (taxeditor): ref #6781 Replace nebula update site with 2016 archived one
Patrick Plitzner
10:45 AM Revision a2effde9 (cdmlib): cleanup
Andreas Müller
10:20 AM Revision e834dd85 (cdmlib): cleanup
Andreas Müller
10:20 AM Revision ebdb4fa1 (cdmlib): fix potential NPE
Andreas Müller
09:21 AM Revision d91c3db0 (taxeditor): Add javadoc
Patrick Plitzner
09:16 AM bug #6875 (Resolved): Duplicate menu in search result view
Applied in changeset commit:taxeditor|422157cd8a146bd0e575167f54c46456ec824bf0. Patrick Plitzner
09:15 AM bug #6875 (Closed): Duplicate menu in search result view
Patrick Plitzner
09:15 AM Revision 422157cd (taxeditor): fix #6875 Fix duplicate menu items in context menu
Patrick Plitzner

08/01/2017

05:58 PM feature request #6824 (Closed): Mapping for Salvador areas
Copied open issue to new ticket #6874 Andreas Müller
05:57 PM feature request #6874 (New): Find better maps for salvador
The borders of the currently used maps (c_america_level_1) do not match very well with the borders of the back ground... Andreas Müller
04:10 PM bug #6684: Use media representation which best fits the available viewport size for the Image Overlay
Hi Andreas,
this is solved, please do the review.
Andreas
Andreas Kohlbecker
04:09 PM bug #6684 (Resolved): Use media representation which best fits the available viewport size for the Image Overlay
Applied in changeset commit:cdm-dataportal|207acc486c14ff87bf11960e786bf4bf02dbdcd5. Andreas Kohlbecker
04:09 PM Revision 207acc48 (cdm-dataportal): fix #6684 using high quality images for the lightbox overlay
Andreas Kohlbecker
03:26 PM feature request #6873 (New): different media captions for search results thumbnail images, Default Image Viewer and Taxon/Images tab

* Search results thumbnail images
* preferably no caption. The captions can be disabled in the settings: `/admin/...
Andreas Kohlbecker
02:47 PM bug #6872 (Worksforme): Specimen editor does not enable save icon when editing
Andreas M.: "Konkret habe ich in Salvador testweise einigen Specime Accession Numbers oder Barcodes zugefügt." Patrick Plitzner
02:34 PM feature request #6871 (Closed): TaxonNameEditor modes for basionym, replaced synonym and validation
The TaxonNameEditor currently offers a checkbox which enables the fields related to basionyms. These fields are hidde... Andreas Kohlbecker
02:34 PM feature request #6870 (New): Further specimen table issues
A couple of smaller issues with the specimen table has already been fixed in #6816. There are few more.
1. The sor...
Andreas Müller
02:19 PM feature request #6869 (Closed): Reference editor: Advanced mode only available for curators
Only curators must be able to use the advanced mode of the Reference Editor. By this submitters are forced to enter a... Andreas Kohlbecker
02:19 PM bug #6816: [Dataportal] Specimen table issues
All the rest works as expected. Andreas Müller
01:32 PM bug #6816 (Feedback): [Dataportal] Specimen table issues
>Vielleicht könnte man das Ganze dann auch noch ein bisschen einrücken, da es ja eine Information ist, die zu dem ein... Andreas Müller
01:22 PM bug #6816: [Dataportal] Specimen table issues
>Sowieso sollten diese Specimenseiten m.E. so ausgebaut werden, dass dort mehr oder weniger alle Specimen Information... Andreas Müller
01:59 PM bug #6861: Number format exception in BHL Query when detail is not a pure number
a) Link only to publication, not to page
b) Calculate page by using a function like the Val(string) function in VB f...
Walter Berendsohn
01:57 PM Revision 2837fda6 (cdmlib): cleanup
Andreas Müller
01:50 PM Revision e2467e27 (cdm-vaadin): adapting to changes constant name
Andreas Kohlbecker
01:38 PM feature request #6867 (Closed): explicitely assign and revoke UPDATE & DELETE permission per enitity in the registration workflow
After an in depth discussion in #4305 we decided that for phyconbank the strategy **D)** (per instance UPDATE & DELET... Andreas Kohlbecker
01:29 PM feature request #6866: Improve specimen page
Also the title needs to be improved, for the given example it is "Specimen LAGU" which could be improved. Andreas Müller
01:21 PM feature request #6866 (Closed): Improve specimen page
The pure specimen pages in the data portal need to be improved. Currently they show only basic and concatenated infor... Andreas Müller
01:29 PM feature request #4305: newly created entities must stay editable even if a user only has the permission to create them
After an in depth discussion we decided that for phyconbank the strategy **D)** (per instance UPDATE & DELETE permiss... Andreas Kohlbecker
01:17 PM feature request #6865: [DISCUSS] Separator for Code and Accession Number
I agree with Walter, adding a ":" after the herbarium code would be the easiest. Tilo Henning
01:01 PM feature request #6865 (Closed): [DISCUSS] Separator for Code and Accession Number
WGB:
TitleCache: Ich würde ein Satzzeichen zwischen Herbarangabe und die dortige ID setzen, also statt (B B 10 001...
Andreas Müller
10:24 AM Revision 8afd66b3 (cdm-dataportal): ref #6840 adapt some German translations to context
Andreas Müller
09:49 AM task #6864 (Duplicate): [DISCUSS] Title and titleCache in Media
We do have title and titleCache in Media. We need to discuss how these 2 work together when editing, importing, searc... Andreas Müller
09:41 AM bug #6863 (New): Incorrect formatting for created (and updated) in supplemental data view
A date like 2017-04-06 21:02:52 (Salvador.Media.id=10) is shown as 2017-4-6 21:2 in the supplemental data view.
W...
Andreas Müller

07/31/2017

08:45 PM bug #6296: Simple search for common names returns duplicates
if not, please open new ticket with remaining issues Andreas Müller
08:44 PM bug #6296: Simple search for common names returns duplicates
Andreas K, could you please review if this is fully fixed now? Andreas Müller
08:22 PM task #3249: [DISCUSS] Free text search for specimen details
remove redundant dataportal tag Andreas Müller
08:20 PM feature request #6616: Question/Discussion: update supported jquery version and remove old/unused js code?
remove redundant dataportal tag Andreas Müller
08:14 PM bug #6862: Supplemental data view is grey when editing images in specimen tree editor
A workaround is to edit the media in the media bulk editor (before oder after adding them to the specimen), but this ... Andreas Müller
08:13 PM bug #6862 (Worksforme): Supplemental data view is grey when editing images in specimen tree editor
What I did:
* open specimen tree editor
* run search
* select a field unit and add an image gallery and a new im...
Andreas Müller
06:49 PM bug #6861: Number format exception in BHL Query when detail is not a pure number
The reason is that the BHL query tries to find the correct page by computing the offset. This is not possible if deta... Andreas Müller
06:46 PM bug #6861 (New): Number format exception in BHL Query when detail is not a pure number
Hallo,
im Details view, Name, protologue – Knopf Query BHL kommt untenst. Fehler.
HG
Walter
~~~
login : w.ber...
Andreas Müller
04:55 PM feature request #6840 (In Progress): Translate dataportal to German
Andreas Müller
04:54 PM feature request #6840: Translate dataportal to German
A first German version is now available. Could you please try to install on one of the redlist data portals for testing. Andreas Müller
04:53 PM feature request #6840: Translate dataportal to German
AK:
Voilá:

https://dev.e-taxonomy.eu/redmine/projects/edit/repository/cdm-dataportal/revisions/2ba9f91d33cacb...
Andreas Müller
04:51 PM Revision a16b56ce (cdm-dataportal): ref #6840 translating dataportal to German / all terms also translated in Spanish
Andreas Müller
03:50 PM feature request #6658: Make mediaCreated editable in Media view
I don't understand why you moved this to 4.10 (98% seems to be implemented in 4.8 therefore we should keep it there f... Andreas Müller
03:50 PM bug #6860 (Closed): Use consistent calendar system for date picker
1) If one uses the datepicker on a system which differs from the local date inconsistent results show up.
E.g. if ...
Andreas Müller
09:48 AM feature request #6856 (Resolved): Add group Admin to standard FirstDataInserter
Applied in changeset commit:cdmlib|c819a3e41645574134e9ab955ecdcf0aa674b34b. Andreas Kohlbecker
09:48 AM Revision c819a3e4 (cdmlib): fix #6856 adding group Admin to FirstDataInserter
Andreas Kohlbecker
09:41 AM bug #6859: DerivedUnitFacade.newFacadeFrom() fails when occurrenceUuid references a FieldUnit
Hallo,

dem was Patrick geschrieben hat schließe ich mich weitgehend an, aber wenn an die Konstruktoren der Derive...
Andreas Kohlbecker
09:40 AM bug #6859: DerivedUnitFacade.newFacadeFrom() fails when occurrenceUuid references a FieldUnit
Hallo,
ich verstehe das nicht ganz. Es ist doch genau anders herum: FieldUnit wird hier nicht abgedeckt, aber Medi...
Andreas Kohlbecker
09:40 AM bug #6859: DerivedUnitFacade.newFacadeFrom() fails when occurrenceUuid references a FieldUnit
Hallo Andreas, Patrick

Wir (AK + ich) hatten uns das ja vorhin angeschaut, dass Walters jetzige Bilder Fehle...
Andreas Kohlbecker
09:39 AM bug #6859 (New): DerivedUnitFacade.newFacadeFrom() fails when occurrenceUuid references a FieldUnit
Andreas Kohlbecker

07/28/2017

03:25 PM feature request #6840: Translate dataportal to German
AK:

wir sollten das so, wie schon auch beider Übersetzung ins Spanische machen.

Die Übersetzter bekommen http...
Andreas Müller
01:39 PM bug #6858 (New): Rename advanced search tabs (inluding Spanisch translation)
WGB:
Advanced Search page:
beide Tabs würde ich nicht nur übersetzen, sondern (wohl auch im Englischen) ändern:...
Andreas Müller
12:43 PM Revision a2a5d590 (taxeditor): Merge branch 'hotfix/4.9.1' into develop
jenkins
12:43 PM Revision 72ab22c8 (taxeditor): Merge branch 'hotfix/4.9.1'
jenkins
12:27 PM Revision 6166b89a (taxeditor): ref #6658 remove 1 when mapping joda.DateTime.month to swt.DateTime (II)
Andreas Müller
12:27 PM Revision eeaf7d09 (taxeditor): ref #6658 remove 1 when mapping joda.DateTime.month to swt.DateTime
Andreas Müller
12:27 PM Revision 47d343d2 (taxeditor): cleanup
Andreas Müller
12:27 PM Revision 31829828 (taxeditor): Fix potential NPE when no session is active when opening specimen editor
Patrick Plitzner
12:27 PM Revision 132e1b1e (taxeditor): add 1 to the month to get the right date out of the swt.DateTime
Katja Luther
12:14 PM Revision e8dbfe22 (taxeditor): Updated version in pom / project files to taxeditor version : 4.9.1 and cdmlib version : 4.9.0
jenkins
12:03 PM Revision b18418d0 (taxeditor): ref #6658 remove 1 when mapping joda.DateTime.month to swt.DateTime (II)
Andreas Müller
12:03 PM Revision d6e1f8a2 (taxeditor): cleanup
Andreas Müller
11:47 AM feature request #6658: Make mediaCreated editable in Media view
you also need to substract 1 when reading joda.DateTime to swt.DateTime. Otherwise you increase existing data by 1 mo... Andreas Müller
11:39 AM Revision 754477ec (taxeditor): ref #6658 remove 1 when mapping joda.DateTime.month to swt.DateTime
Andreas Müller
11:36 AM Revision c892e881 (taxeditor): cleanup
Andreas Müller

07/27/2017

05:05 PM task #6841: [DISCUSS] Correct use of MediaSpecimen and derivates
Andreas Müller wrote:
> WGB (2017-07-22):
>
> ich bin unterwegs, Diskussionsbeitrag also per Email.
> Ich entne...
Andreas Müller
04:40 PM task #6841: [DISCUSS] Correct use of MediaSpecimen and derivates
TH (2017-07-24):
MediaSpecimen wurde ja v.a. “erfunden” um der Notwendigkeit Rechnung zu tragen, dass der Typus in...
Andreas Müller
04:39 PM task #6841: [DISCUSS] Correct use of MediaSpecimen and derivates
WGB (2017-07-22):
ich bin unterwegs, Diskussionsbeitrag also per Email.
Ich entnehme dem Post von Andreas, dass ...
Andreas Müller
11:30 AM feature request #6856 (Closed): Add group Admin to standard FirstDataInserter
A group Admin is in most cases required. The group should have the right "Role_ADMIN".
Andreas Müller
10:50 AM Revision 6f5e1f0c (cdm-vaadin): ref #6852 using the DummyDataInserter to avoid NPEs in the Spring ApplicationListener intitialization
Andreas Kohlbecker
10:48 AM Revision be10b621 (cdmlib): ref #6852 introducing a DummyDataInserter to be used instead of null
Andreas Kohlbecker

07/26/2017

03:04 PM feature request #4305: newly created entities must stay editable even if a user only has the permission to create them
After sleeping one night over it, i came to the following conclusions:
* A) This approach is not appropriate in t...
Andreas Kohlbecker
02:33 PM Revision b10dc109 (cdm-vaadin): dropping InactiveUIException
Andreas Kohlbecker
12:28 PM bug #6787 (Resolved): NPE when opening Specimen Tree Editor
fixed with commit:taxeditor|8e0843b5e8f840b1cbac15a7edfba2816ea39aeb Patrick Plitzner
12:19 PM Revision 8e0843b5 (taxeditor): Fix potential NPE when no session is active when opening specimen editor
Patrick Plitzner

07/25/2017

01:08 PM feature request #4305 (Feedback): newly created entities must stay editable even if a user only has the permission to create them
I think solution **A)** as described above is the best idea so far we had.
What do you think Andreas M?
Andreas Kohlbecker
12:45 PM feature request #4305 (In Progress): newly created entities must stay editable even if a user only has the permission to create them
Andreas Kohlbecker
12:44 PM bug #6855 (Closed): TeamOrPersonField allows adding Persons and Team for users with unsufficient authorities
Andreas Kohlbecker
12:44 PM bug #6855 (Resolved): TeamOrPersonField allows adding Persons and Team for users with unsufficient authorities
Applied in changeset commit:cdm-vaadin|b4d87f3f377474f268e6fca33514182f084232ab. Andreas Kohlbecker
11:57 AM bug #6855 (Closed): TeamOrPersonField allows adding Persons and Team for users with unsufficient authorities
Andreas Kohlbecker
12:44 PM Revision b4d87f3f (cdm-vaadin): fix #6855 disabling add Team, Person buttons when privileges insufficient
- also extending UserHelper class Andreas Kohlbecker
12:42 PM Revision af113c74 (cdmlib): ref #6855 ICdmPermissionEvaluator method which tests by CdmBase type and does not require an instance
Andreas Kohlbecker
12:29 PM Revision 9493160a (cdm-vaadin): ref #6852 removing invalid authority from data inserter
Andreas Kohlbecker
11:20 AM Revision e68c438e (cdmlib): ref #6853 increasing log level for unimplemented security critical method
Andreas Kohlbecker
10:55 AM feature request #6852 (Resolved): GrantedAuthorities and permission Groups for Phycobank
Applied in changeset commit:cdm-vaadin|1d4b43d8b444f8229024422e22e2cb6836c743eb. Andreas Kohlbecker
10:49 AM feature request #6852 (Closed): GrantedAuthorities and permission Groups for Phycobank
Permission `Groups` with their associated `GrantedAuthorities` required for phycobank:
**Curator**
new group w...
Andreas Kohlbecker
10:55 AM Revision 1d4b43d8 (cdm-vaadin): fix #6852 data insterter to create Group 'Curation' and to extend 'Editor' for phycobank
- refactoring data inserter initialization
- removing obsolete component scans
Andreas Kohlbecker
10:51 AM feature request #6654 (Resolved): implement a CdmPermissionVoter for Registrations
Applied in changeset commit:cdmlib|472cb9dce75a42eadaf2ebfe04622223fa552b13. Andreas Kohlbecker
10:51 AM Revision 991541d2 (cdmlib): ref #6852 RunAsAuthenticator as abstract base class for all data inserters
Andreas Kohlbecker
10:51 AM Revision 472cb9dc (cdmlib): fix #6654 RegistrationVoter implemented
Andreas Kohlbecker
08:36 AM task #6630 (Closed): Unify TaxonName cache strategies
Andreas Müller
08:32 AM task #6630 (Resolved): Unify TaxonName cache strategies
Applied in changeset commit:cdmlib|15035cf0587e8d510f07f6804fed7c4c8903f8be. Andreas Müller
08:35 AM feature request #6361 (Closed): [MASTER] Merge all TaxonName classes into 1 class
Andreas Müller
08:32 AM Revision 15035cf0 (cdmlib): fix #6630 remove rectifyNameCacheStrategy to differ name types
Andreas Müller

07/24/2017

11:49 PM Revision 063510dc (cdmlib): ref #6630 unify ViralNameDefaultCacheStrategy with NonViralNameDefaultCacheStrategy
Andreas Müller
11:25 PM bug #6851 (Resolved): Use country label instead of description in specimen cache strategy
Applied in changeset commit:cdmlib|c75c21c53d53dc8aaa0e2e2c7592739e9ac224fe. Andreas Müller
11:22 PM bug #6851 (Closed): Use country label instead of description in specimen cache strategy
Andreas Müller
11:25 PM Revision c48fa5fb (cdmlib): minor
Andreas Müller
11:25 PM Revision f1d58e11 (cdmlib): use uuid instead of id for refresh in ImportDeduplicationHelper
Andreas Müller
11:25 PM Revision c75c21c5 (cdmlib): fix #6851 use country label instead of description in specimen cache strategy
Andreas Müller
11:10 PM Revision 71fd6f38 (cdmlib): minor
Andreas Müller
11:33 AM bug #6850 (Closed): NPE when clearing label of "kind of" term in TermEditor
~~~
login : admin
editor version : 4.9.0
server : test.e-taxonomy.eu (edit-test) / rem_conf_am
schema versi...
Patrick Plitzner
11:31 AM feature request #6848 (Closed): Add context menu option to add "kind of" term to TermEditor
Implemented with commit:taxeditor|1c9c9562bc554cf40f6c371d7abb6d5d5e123e25 Patrick Plitzner
11:30 AM feature request #6848 (Closed): Add context menu option to add "kind of" term to TermEditor
Patrick Plitzner
11:31 AM feature request #6849 (In Progress): [DISCUSS] How to handle "kind of" term creation in TermEditor
AM:
Ich bin mir auch noch nicht so sicher, ob wir diese Funktion wirklich standardmäßig anbieten sollten. Oder vie...
Patrick Plitzner
11:10 AM Revision 8a31dbbc (cdmlib): ignoring logfile
Andreas Kohlbecker
11:07 AM Revision 9e72b600 (cdm-dataportal): Change settings default
Patrick Plitzner
10:40 AM feature request #6847 (Closed): Change location of workbench.xmi to taxeditor installation folder
fixed with commit:taxeditor|f8f1f3fe2ef3a462a6ed2f044f6bd42ba91a1d8d
and
commit:taxeditor|8c8d24e54a12d8a6d51a84a65...
Patrick Plitzner
10:39 AM feature request #6847 (Closed): Change location of workbench.xmi to taxeditor installation folder
Patrick Plitzner
10:26 AM bug #6240 (Closed): maven javadoc plugin fails with java 1.8
remaining issues -> #6241 Patrick Plitzner
10:11 AM bug #6846 (Closed): layout component sizing probelms in worflow view
Andreas Kohlbecker
10:10 AM bug #6846 (Resolved): layout component sizing probelms in worflow view
Applied in changeset commit:cdm-vaadin|84724c61dba6abb23bf8ae2d4aab9985d89da2a4. Andreas Kohlbecker
09:41 AM bug #6846 (Closed): layout component sizing probelms in worflow view
Problems:
* the registrations list panel should expand to the bottom of the page
* the content of the registratio...
Andreas Kohlbecker
10:10 AM Revision 84724c61 (cdm-vaadin): fix #6846 improving AbstractPageView layout
Andreas Kohlbecker
10:08 AM bug #6843 (Closed): resize problems of Popup editors when clicking contained elements
Andreas Kohlbecker
10:08 AM bug #6843 (Resolved): resize problems of Popup editors when clicking contained elements
Applied in changeset commit:cdm-vaadin|55f3f7276e2dd80c2ee631360575b2be9218dd0a. Andreas Kohlbecker
10:08 AM Revision 0af0ecf8 (cdm-vaadin): fix #6843 improving AbstractPageView layout
Andreas Kohlbecker
09:28 AM bug #6842: NPE in Registration constructor when name is null
agreed and fixed Andreas Kohlbecker
09:27 AM Revision 95e0383a (cdmlib): fix #6842 avoiding NPE in Registation - better aproach
Andreas Kohlbecker

07/22/2017

09:36 AM bug #6790 (Closed): IO class hierarchie creates problems in IDE
Close this. Can be reopened if the problem appears again. Andreas Müller
09:35 AM feature request #6806: Add context menu to FeatureTreeEditor
It looks like multiple usage of 1 feature in the same feature tree is currently not supported. If I e.g. select a fea... Andreas Müller
09:14 AM feature request #6806: Add context menu to FeatureTreeEditor
It is great that the selection distinguishes vocabularies and shows them in a tree structure. Unfortunately the terms... Andreas Müller
09:12 AM feature request #6806 (Feedback): Add context menu to FeatureTreeEditor
With right click menu we have now the possibility to distinguish "add" (on top level) and "add child". This should be... Andreas Müller
09:03 AM bug #6845: dirty button does not work in feature tree editor
Looks like this is a general issue, not only in feature tree editor. I tried in term editor and name editor and both ... Andreas Müller
08:57 AM bug #6845 (Worksforme): dirty button does not work in feature tree editor
if I save a feature tree the save button is still enabled and unclear if save was successful Andreas Müller
08:54 AM feature request #6805 (Feedback): Implement drag and drop from Term Editor (Feature) to FeatureTreeEditor
In general it works, but when after opening the TaxEditor and then opening the feature tree editor and then opening t... Andreas Müller
08:40 AM bug #6844 (Rejected): New feature tree selection does not allow "no save"
If a feature tree in feature tree editor was changed and one clicks on "select new feature tree" a save dialog opens ... Andreas Müller
08:32 AM bug #6808 (Closed): New misapplied name details view destroyed old concept relationship details view
works fine Andreas Müller
01:29 AM feature request #6824: Mapping for Salvador areas
AK:

der webservice liefert einen kaputten query parameter string:

http://api.cybertaxonomy.org/salvador/por...
Andreas Müller

07/21/2017

08:48 PM Revision 55f3f727 (cdm-vaadin): fix #6843 avoiding oversized windows by setting a defined height
Andreas Kohlbecker
04:57 PM bug #6843 (In Progress): resize problems of Popup editors when clicking contained elements
unfortunately still not solved Andreas Kohlbecker
04:53 PM bug #6843 (Resolved): resize problems of Popup editors when clicking contained elements
Applied in changeset commit:cdm-vaadin|7954536ed6fe523ed7ea6f42fafa42273f11ea88. Andreas Kohlbecker
04:52 PM bug #6843: resize problems of Popup editors when clicking contained elements
This seems to be caused by the contained layouts having no size, see https://vaadin.com/forum/#!/thread/249127/249162 Andreas Kohlbecker
04:51 PM bug #6843 (Closed): resize problems of Popup editors when clicking contained elements
e.g. when clicking the lazy combobox in the Name editor it can happen that the popup window exceeds the body element ... Andreas Kohlbecker
04:53 PM Revision 7954536e (cdm-vaadin): fix #6843 popup window content layouts are guaranteed to have full size
Andreas Kohlbecker
04:47 PM feature request #6810 (Closed): View for starting new registrations implemented
Andreas Kohlbecker
10:48 AM feature request #6810 (In Progress): View for starting new registrations implemented
Andreas Kohlbecker
04:27 PM Revision 8026e95d (taxeditor): merge with develop after release 4.9
Katja Luther
04:21 PM Revision 6bb3f242 (taxeditor): add nebula richtext to target plattform
Katja Luther
03:59 PM bug #6842: NPE in Registration constructor when name is null
hmm, should we better fix the setName() method instead the NewInstance method? Andreas Müller
03:36 PM bug #6842 (Resolved): NPE in Registration constructor when name is null
Applied in changeset commit:cdmlib|33cef333a65989e85839c3d4afebe253ed46ecf3. Andreas Kohlbecker
03:35 PM bug #6842 (Closed): NPE in Registration constructor when name is null
Andreas Kohlbecker
03:36 PM Revision 33cef333 (cdmlib): fix #6842 avoiding NPE in Registation
Andreas Kohlbecker
03:33 PM Revision 1ff11053 (cdm-vaadin): ref #6169 feature completed: adding new type designation workingsets
Andreas Kohlbecker
03:33 PM Revision b18e16cd (cdm-vaadin): ref #6169 TypeDesignationSetManager can handle empty sets and can add typeDesignations
Andreas Kohlbecker
03:33 PM Revision 0e072f9c (cdm-vaadin): ref #6169 Button row to create new registrations in a registration working set
Andreas Kohlbecker
03:33 PM Revision 9670d79a (cdm-vaadin): ref #6811 avoiding repeated loading of views
Andreas Kohlbecker
03:13 PM task #6841 (New): [DISCUSS] Correct use of MediaSpecimen and derivates
MediaSpecimen were originally "invented" to allow handling specimesn which are available only as images/drawings/figu... Andreas Müller
02:59 PM Revision fe19a89b (cdm-dataportal): typos
Andreas Kohlbecker
02:57 PM Revision 2ba9f91d (cdm-dataportal): ref #6840 adding german translation file
Andreas Kohlbecker
02:37 PM feature request #6658: Make mediaCreated editable in Media view
Katja Luther wrote:
> Andreas Müller wrote:
> > There is another **critical** issue. If you select e.g. July than J...
Katja Luther
02:21 PM feature request #6658: Make mediaCreated editable in Media view
Andreas Müller wrote:
> There is another **critical** issue. If you select e.g. July than June is written into the t...
Katja Luther
12:54 PM feature request #6658: Make mediaCreated editable in Media view
There is another **critical** issue. If you select e.g. July than June is written into the textfield. Looks like inco... Andreas Müller
12:40 PM feature request #6658: Make mediaCreated editable in Media view
needs to be fixed completely in 4.10 Katja Luther
02:36 PM Revision 2901517f (taxeditor): add 1 to the month to get the right date out of the swt.DateTime
Katja Luther
02:28 PM feature request #6840 (Closed): Translate dataportal to German
as template for the minimum set of translations please refer to the spanish translation: [cdm_dataportal/translations... Andreas Müller
02:03 PM task #6839 (Rejected): remove old workbench.xmi from .cdmlibrary
The .xmi is now stored within the instance so we do not need the one in .cdmLibrary anymore Andreas Müller
01:33 PM bug #6838 (Closed): Implement i18n for FeatureTreeEditor
If another language than English is chosen for term representations in TaxEditor preferences, the feature tree editor... Andreas Müller
12:57 PM Revision f901d8b7 (taxeditor): disable content filter in ckEditor to avoid deleting of html tags
Katja Luther
12:45 PM bug #5639: NPE when showing name relationships for a name originally related to a deleted name
as I could not reproduce it without deleting the name in the database, we have to move the ticket and try to play aro... Katja Luther
12:42 PM feature request #6527 (Closed): Refactor delete configurator for media
the remaining issues will be handled in #6730, and this ticket is closed Katja Luther
12:39 PM bug #3866 (Resolved): Link Taxon Editor name to the taxon in the taxon navigator
please review. Katja Luther
12:35 PM feature request #6681 (Closed): Correct formatting for misapplied names in name editor
Katja Luther
12:13 PM bug #6683: Use best quality media representation in image viewer on media page
Andreas Kohlbecker wrote:
> I cant really do the review since the flora of greece portal still is using the full-siz...
Andreas Müller
10:52 AM bug #6683: Use best quality media representation in image viewer on media page
I cant really do the review since the flora of greece portal still is using the full-size images as thumbnails.
@a.m...
Andreas Kohlbecker
11:45 AM feature request #6390 (Closed): Details view for misapplied names
Katja Luther
11:29 AM feature request #5890 (In Progress): Implement auto-suggest for data portal
Andreas Müller
11:06 AM task #6421 (Closed): Document workaround for user.home location problem in Windows
Andreas Kohlbecker
11:00 AM feature request #6820 (Closed): Settings option to place the synonymy at the top of the general page and to supress the according tab.
Andreas Kohlbecker
10:59 AM bug #6192 (New): taxon annotations only shown when 'Show accepted taxon on top of the synonymy' is enabled
Andreas Müller wrote:
> Is there a reason why this is assigned to me?
don't now why ....
Andreas Kohlbecker
10:54 AM bug #6608 (Closed): Setting the 'Bounding box' for the OSM layer no longer works
Andreas Kohlbecker
10:24 AM bug #6816 (Resolved): [Dataportal] Specimen table issues
Andreas Müller
10:21 AM bug #6837 (Closed): Use country label instead of description for specimen table
fixed with commit:cdmlib|4103e3d4e8ad9db380a1de83f10c88d04f52a753. Patrick Plitzner
10:18 AM bug #6837 (Closed): Use country label instead of description for specimen table
Patrick Plitzner

07/20/2017

03:48 PM Revision 1ecaff82 (cdm-server): Merge branch 'release/4.9.0' into develop
jenkins
03:48 PM Revision c5beb9b9 (cdm-server): jenkins merging release branch into master (strategy: theirs)
jenkins
03:47 PM Revision fe678fc3 (cdm-server): updating poms for branch'release/4.9.0' with non-snapshot versions
jenkins
03:47 PM Revision 6b56022f (cdm-webapp): Merge branch 'release/4.9.0' into develop
jenkins
03:47 PM Revision 865e1125 (cdm-webapp): jenkins merging release branch into master (strategy: theirs)
jenkins
03:47 PM Revision 10495ad6 (cdm-webapp): updating poms for branch'release/4.9.0' with non-snapshot versions
jenkins
03:46 PM Revision cb72bb94 (cdm-webapp): jenkins bumping cdmlib.version and cdm.vaadin.version to 4.9.0
jenkins
03:46 PM Revision bf90fad9 (cdm-vaadin): Merge branch 'release/4.9.0' into develop
jenkins
03:46 PM Revision 395a898d (cdm-vaadin): jenkins merging release branch into master (strategy: theirs)
jenkins
03:44 PM Revision ce91a930 (taxeditor): Merge branch 'release/4.9.0' into develop
jenkins
03:44 PM Revision aca69232 (taxeditor): Merge branch 'release/4.9.0'
jenkins
03:42 PM Revision b7cb3d29 (cdm-dataportal): Merge branch 'release/4.9.0' into develop
jenkins
03:42 PM Revision a9299d3d (cdm-vaadin): updating poms for branch'release/4.9.0' with non-snapshot versions
jenkins
03:42 PM Revision 42b7149b (cdm-dataportal): updating poms for branch'release/4.9.0' with non-snapshot versions
jenkins
03:42 PM Revision 6c0748ae (cdm-vaadin): jenkins bumping cdmlib.version to 4.9.0
jenkins
03:42 PM Revision ef327917 (cdm-dataportal): release-preparation: production level css
jenkins
03:34 PM Revision d5c74704 (cdmlib): Updating develop poms back to pre merge state
jenkins
03:34 PM Revision f6e1d849 (cdmlib): Merge branch 'master' into develop
jenkins
03:34 PM Revision 44e038d0 (cdmlib): updating develop poms to master versions to avoid merge conflicts
jenkins
03:34 PM Revision b732435b (cdmlib): Merge branch 'release/4.9.0'
jenkins
03:20 PM Revision b50252b5 (cdmlib): updating poms for branch'release/4.9.0' with non-snapshot versions
jenkins
02:24 PM Revision ff93c842 (cdm-webapp): jenkins bumping cdmlib.version and cdm.vaadin.version to 4.9.0-SNAPSHOT
jenkins
02:24 PM Revision 38449d51 (cdm-webapp): updating poms for 4.10.0-SNAPSHOT development
jenkins
02:24 PM Revision c9722b54 (cdm-webapp): jenkins bumping cdmlib.version and cdm.vaadin.version to 4.10.0-SNAPSHOT
jenkins
02:22 PM Revision 15443c7e (cdm-vaadin): jenkins bumping cdmlib.version to 4.9.0-SNAPSHOT
jenkins
02:22 PM Revision f4606aa5 (cdm-vaadin): updating poms for 4.10.0-SNAPSHOT development
jenkins
02:22 PM Revision e5d30156 (cdm-vaadin): updating poms for 4.9.0 branch with snapshot versions
jenkins
01:41 PM Revision 89a1dea8 (taxeditor): Updated version in pom / project files to taxeditor version : 4.10.0-SNAPSHOT and cdmlib version : 4.10.0-SNAPSHOT
jenkins
01:41 PM Revision 80f26390 (taxeditor): Updated version in pom / project files to taxeditor version : 4.9.0 and cdmlib version : 4.9.0
jenkins
01:41 PM Revision 9a9d6370 (cdm-server): updating poms for 4.10.0-SNAPSHOT development
jenkins
01:40 PM Revision ebb10c16 (cdm-dataportal): updating poms for 4.10.0-SNAPSHOT development
jenkins
01:40 PM Revision 9bc9045b (cdm-vaadin): jenkins bumping cdmlib.version to 4.10.0-SNAPSHOT
jenkins
01:37 PM Revision 4d528305 (cdmlib): updating poms for 4.10.0-SNAPSHOT development
jenkins
11:01 AM Revision 44eec74b (taxeditor): minor
Katja Luther
09:27 AM Revision f7887244 (taxeditor): first implementation of intextreferences in editor
Katja Luther
09:15 AM Revision 99a412d5 (taxeditor): new classes for intextReference implementation
Katja Luther

07/19/2017

04:47 PM Revision f94b166b (taxeditor): ref #6597 Avoid session errors and empty view for unaccepted selections
Patrick Plitzner
04:34 PM Revision 2e4330c6 (taxeditor): ref #6597 Change error handling
Patrick Plitzner
04:33 PM Revision 4201acbf (taxeditor): ref #6597 Remove duplicate menu item
Patrick Plitzner
04:33 PM Revision 4719d4fd (taxeditor): ref #6597 fix selection handling
Patrick Plitzner
02:45 PM bug #6836 (Closed): Swagger documentation for OAIPMH broken
Hallo,

wenn man unter http://api.cybertaxonomy.org/cichorieae/doc/?group=Generic+REST+API auf OAI-PMH klickt, bek...
Andreas Kohlbecker
02:16 PM Revision 5062284f (taxeditor): ref #6597 Propagate editing events
Patrick Plitzner
12:38 PM Revision 2103c420 (cdmlib-apps): ref #6265 fix feature uuids for Salvador text specimen
Andreas Müller

07/18/2017

06:18 PM bug #6825 (Closed): Specimen map shows point data only if ALL field units are georeferenced
using
~~~java
try {
...
} catch (NullPointerException e){ /*IGONRE*/ }
~~~
would improve readability, but...
Andreas Kohlbecker
05:56 PM bug #6825: Specimen map shows point data only if ALL field units are georeferenced
please review Andreas Müller
12:15 PM bug #6825 (Resolved): Specimen map shows point data only if ALL field units are georeferenced
Applied in changeset commit:cdmlib|699c82249407dfd626386ebc3b20a5cb6ad50496. Andreas Müller
12:06 PM bug #6825: Specimen map shows point data only if ALL field units are georeferenced
The main problem is in EditGeoService l221ff
~~~ java
if (specimenOrObservation instanceof FieldUni...
Andreas Müller
11:27 AM bug #6825: Specimen map shows point data only if ALL field units are georeferenced
The code line throwing the exception is:
~~~java
data.append(point.getLatitude() + "," + point.getLongitude());
...
Andreas Kohlbecker
11:11 AM bug #6825: Specimen map shows point data only if ALL field units are georeferenced
the root cause for this is a NPE in EditGeoServiceUtilities
http://test.e-taxonomy.eu/cdmserver/salvador/ext/edit...
Andreas Kohlbecker
10:11 AM bug #6825 (Closed): Specimen map shows point data only if ALL field units are georeferenced
Example: http://test.e-taxonomy.eu/dataportal/preview/salvador/cdm_dataportal/taxon/507e13f3-5db7-45a6-a41e-07f0de203... Andreas Müller
06:12 PM bug #6835 (New): Revise decission to color specimenOrObservations depending on there type
AM:
Die Occurrence Punktfarbe scheint vom Type abhängig zu sein:
`EditGeoserviceUtitlities.82ff`
~~~java
...
Andreas Kohlbecker
06:03 PM Revision 423f5e58 (cdm-dataportal): improving setting documentation of taxon layout tabs
Andreas Kohlbecker
05:52 PM Revision 9d327042 (cdmlib): fix #6825 again handle null points, to be on the safe side
Andreas Müller
05:52 PM Revision 0bc6dc74 (cdmlib): cleanup
Andreas Müller
05:45 PM bug #6817 (Closed): Media page: "Back to Image" only shown when the HTTP referrer is a cdm_dataportal page
Andreas Kohlbecker
05:45 PM bug #6817 (Resolved): Media page: "Back to Image" only shown when the HTTP referrer is a cdm_dataportal page
Applied in changeset commit:cdm-dataportal|3e2af8c2d9894c772b75dc3fb822483ad52f401b. Andreas Kohlbecker
05:45 PM Revision 3e2af8c2 (cdm-dataportal): fix #6817 'Back to Image' only shown when the HTTP referrer is a cdm_dataportal taxon page
Andreas Kohlbecker
05:35 PM feature request #6818 (Closed): Default Image Viewer: setting to enable display of 'Media Representations'
Andreas Kohlbecker
05:21 PM feature request #6818 (Resolved): Default Image Viewer: setting to enable display of 'Media Representations'
Applied in changeset commit:cdm-dataportal|63d5030d05d81a027707d4c8cc3aef081666266c. Andreas Kohlbecker
05:34 PM bug #6822 (Closed): Media settings: "Show captions under thumbnails" has no effect on the Image Viewer
The image gallery setting for the media page where only a left over from an earlier version.
This irritating setting...
Andreas Kohlbecker
05:21 PM Revision 63d5030d (cdm-dataportal): fix #6818 display of media representations in the media page now optional \n also deleting useless media gallery settings ref #6822
Andreas Kohlbecker
04:26 PM Revision 92568738 (taxeditor): ref #6597 Prototye for migrated details view
Patrick Plitzner
03:35 PM feature request #6834 (New): [DISCUSS] add inner text to Intextreference or other ideas for easier handling of intextReferences in TaxEditor
In taxeditor the convertion of the cdm markup of an intextreference is performed quite often, therefore maybe it is r... Katja Luther
03:26 PM feature request #6820 (Resolved): Settings option to place the synonymy at the top of the general page and to supress the according tab.
Applied in changeset commit:cdm-dataportal|22383f954d526ced5db157f7d79e72c549d38b99. Andreas Kohlbecker
03:26 PM Revision 22383f95 (cdm-dataportal): fix #6820 synonymy can be placed in the general page instead of being a tab
Andreas Kohlbecker
03:18 PM bug #6827: The Editor for TaxonNodeRelated GrantedAuthorities is unusable in e4
Andreas Müller wrote:
> If this does not work on ALL machines and graphik frameworks I wouldn't say it "worksforme"....
Andreas Kohlbecker
02:23 PM bug #6827: The Editor for TaxonNodeRelated GrantedAuthorities is unusable in e4
If this does not work on ALL machines and graphik frameworks I wouldn't say it "worksforme".
What do others think?...
Andreas Müller
01:20 PM bug #6827 (Worksforme): The Editor for TaxonNodeRelated GrantedAuthorities is unusable in e4
so this is not a critical problem. please create another ticket for the 'Expand to containing view problem' if needed. Andreas Kohlbecker
01:18 PM bug #6827: The Editor for TaxonNodeRelated GrantedAuthorities is unusable in e4
Andreas Kohlbecker wrote:
> I added a screenshot taken with Ubuntu 14.04 KDE 4.14.13 GTK 3.0 Adawaita-X-light
Swi...
Andreas Kohlbecker
01:11 PM bug #6827: The Editor for TaxonNodeRelated GrantedAuthorities is unusable in e4
I added a screenshot taken with Ubuntu 14.04 KDE 4.14.13 GTK 3.0 Adawaita-X-light
Andreas Kohlbecker
11:45 AM bug #6827: The Editor for TaxonNodeRelated GrantedAuthorities is unusable in e4
Can you add further information. I already edited TaxonNode based granted authorities with 4.8.2 and had no problems.... Andreas Müller
10:43 AM bug #6827 (Worksforme): The Editor for TaxonNodeRelated GrantedAuthorities is unusable in e4
The editor component is too narrow the CRUD flags can not be edited Andreas Kohlbecker
02:28 PM bug #6828: SpecimenOrObservation and Person/Team missing in Cache updater
maybe you are right, I thought it is also an update problem in the factual data view, but probably it is mostly a spe... Andreas Müller
12:43 PM bug #6828: SpecimenOrObservation and Person/Team missing in Cache updater
Andreas Müller wrote:
> Shouldn't we split this in 2 tickets? Also I guess at least part 2 is to be assigned to KL?
...
Patrick Plitzner
11:48 AM bug #6828: SpecimenOrObservation and Person/Team missing in Cache updater
Shouldn't we split this in 2 tickets? Also I guess at least part 2 is to be assigned to KL? Andreas Müller
11:24 AM bug #6828 (Closed): SpecimenOrObservation and Person/Team missing in Cache updater
Walter:
Ich habe die Landesbezeichnung im Term-Editor für Named Area in El Salvador geändert – das wird aber auch ...
Patrick Plitzner
02:25 PM bug #6833 (New): glue for feature block items configurable: feature CommonName

the Glue for common names is hardcoded with different glues for TextData and CommonName Elements:
* TextData: ' ...
Andreas Kohlbecker
02:24 PM bug #6832 (New): glue for feature block items configurable: feature distribution

Andreas Kohlbecker
02:23 PM bug #6831 (Closed): glue for feature block items configurable
Andreas Kohlbecker
01:51 PM bug #6831 (Closed): glue for feature block items configurable
The glue string is already used in the code but a settings options is still missing in the admin UI.
There are a cou...
Andreas Kohlbecker
02:17 PM Revision b9e9f59b (cdm-dataportal): ref #6831 feature item glue can be set in the admin UI
Andreas Kohlbecker
12:55 PM Revision 4103e3d4 (cdmlib): Use country label instead of description for specimen table
Patrick Plitzner
12:14 PM Revision 699c8224 (cdmlib): fix #6825 remove null points from fieldUnitPoints list
Andreas Müller
12:14 PM Revision f67ed92e (cdmlib): cleanup
Andreas Müller
11:40 AM bug #6826: User bulk editor loses selection focus on save
Is this a general behavior of bulk editors? Andreas Müller
10:41 AM bug #6826 (New): User bulk editor loses selection focus on save
When you perform a save operation while editing a User, the selection is reseted to the first user in the list.
If t...
Andreas Kohlbecker
11:26 AM bug #6830 (New): Factual data view should be emptied when related taxon editor is closed
Patrick Plitzner
11:25 AM bug #6829 (New): [DISCUSS] specimen label in bulk editor
Walter:
Bulk Editor: „Title Cache“: Ich würde ein Satzzeichen zwischen Herbarangabe und die dortige ID setzen, als...
Patrick Plitzner
10:52 AM Revision 1f83b218 (taxeditor): Update documentation
Patrick Plitzner
01:31 AM feature request #6824 (In Progress): Mapping for Salvador areas
Andreas Müller
12:47 AM feature request #6824 (Closed): Mapping for Salvador areas
Suitable layer is available here: http://edit.africamuseum.be/geoserver/topp/wms?service=WMS&version=1.1.0&request=Ge... Andreas Müller

07/17/2017

06:21 PM bug #6816: [Dataportal] Specimen table issues
Patrick Plitzner wrote:
> wir haben ja letzte Woche testweise ins Salvador Testportal ca. 20.000 Specimen importiert...
Patrick Plitzner
03:23 PM bug #6816 (Closed): [Dataportal] Specimen table issues
wir haben ja letzte Woche testweise ins Salvador Testportal ca. 20.000 Specimen importiert.
Z.B. hier: http://test...
Patrick Plitzner
06:14 PM Revision 907cc9b4 (cdm-dataportal): ref #6816 Enhance layout and specimen title
Patrick Plitzner
06:02 PM feature request #6815: OriginalSource idNamespace + idInSource default separator should be whitespace
ja, dazu was im Namespace und was direkt in IdInSource landet gibt es ja keine feste Regel. Ich schiebe häufig die st... Andreas Müller
03:21 PM feature request #6815 (Closed): OriginalSource idNamespace + idInSource default separator should be whitespace
> der Slash in [Fig./1] steht nicht in den Daten, wo kommt der her?
Fig .1 ist in den Daten als "idInSource": "1",...
Andreas Kohlbecker
05:37 PM bug #6823 (New): php Warning: Illegal string offset '#value' in compare_description_element_render_arrays() - line 421
in Palmweb portal :
http://www.palmweb.org/cdm_dataportal/taxon/53a05455-e318-4237-a0a6-b0e5c3ce44a7
This is no...
Andreas Kohlbecker
05:18 PM bug #6822 (Closed): Media settings: "Show captions under thumbnails" has no effect on the Image Viewer
The "Show captions under thumbnails" has no effect on the Image Viewern but it works in other galleries like in the s... Andreas Kohlbecker
05:14 PM bug #6821 (Worksforme): footnote keys without trailing dot character
remove the trailng dot character from the footnote keys which are shown with the footnote:
![](picture465-1.png)
...
Andreas Kohlbecker
05:10 PM Revision 4204e470 (cdm-dataportal): updating Sinonimía in spanish translation
Andreas Kohlbecker
05:07 PM feature request #6820 (Closed): Settings option to place the synonymy at the top of the general page and to supress the according tab.
Often the synonyms is to be displayed in the general tab. To achieve this the portal has to be in tab-less mode, whic... Andreas Kohlbecker
04:28 PM Revision 6557bce4 (cdmlib): ref #6816 Fix date and collection string
Patrick Plitzner
04:27 PM Revision fa09fe7d (cdm-dataportal): ref #6816 add line break before type information
Patrick Plitzner
04:26 PM bug #6819 (New): Distibution feature block id must be normalized and should not depend on language
In the salvador the Distibution feature block id is translated to spanish and not normalized:
http://portal.cybert...
Andreas Kohlbecker
03:59 PM Revision 48b1eaa7 (cdm-dataportal): ref #6816 Show URL of stable identifier
Patrick Plitzner
03:29 PM feature request #6818 (Closed): Default Image Viewer: setting to enable display of 'Media Representations'

Wir sollten aber über die Settings die Möglichkeit bieten die „Media Representations“ nur dann explizit ein zu scha...
Andreas Kohlbecker
03:26 PM bug #6817 (Closed): Media page: "Back to Image" only shown when the HTTP referrer is a cdm_dataportal page
> Der Link „Regresar a imágenes” bringt einen auf die Taxon page zurück – wohl, da hier nur ein Bild in der Galery is... Andreas Kohlbecker
02:49 PM Revision b9ca9ddc (taxeditor): adapt refresh to fix refresh problem for moveTaxon
Katja Luther
02:45 PM Revision 0c72327c (cdmlib): movetaxonNode: add new and old parent as updatedObject to resullt
Katja Luther
 

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