Activity
From 04/24/2017 to 05/23/2017
05/22/2017
- 07:02 PM task #6671 (Closed): Remove generics from TaxonName
- 04:09 PM bug #6669: Duplicate menu items in several views and editor
- @Andreas: Can you please check if this still happens? I think I tried all views from the "Show View" menu and all edi...
- 04:07 PM bug #6669 (Resolved): Duplicate menu items in several views and editor
- Applied in changeset commit:taxeditor|e1fa7fbe2c592da0b7297508d1e1a192437b9d6d.
- 03:49 PM bug #6669 (Closed): Duplicate menu items in several views and editor
- The first time or sometimes always when a context menu is shown there are duplicate menu items
- 04:02 PM bug #6670 (New): [DISCUSS] What does the "Reporting" view do? Is it needed?
- The class itself does not do anything:
~~~
/**
* Copyright (C) 2007 EDIT
* European Distributed Institute of Ta... - 02:55 PM task #6630 (In Progress): Unify TaxonName cache strategies
- 01:41 PM bug #6668 (Closed): NPE in DetailsView when deleting a type specimen
- 1. Create a type specimen for a taxon
1. Delete the specimen in the specimen hierarchy editor
1. switch back to the... - 01:27 PM feature request #6667 (New): Improve visual separation of search composite in specimen editor
- Walter: "Erstmal finde ich immer noch die Such-Zeilen verwirrend. Ich weiß jetzt, dass es die Suche ist und nicht zu ...
- 01:25 PM bug #6666 (Resolved): Exception in SearchResultView when starting the Taxeditor
- fixed with commit:taxeditor|c54a89ad8a5e87fc1d078d342f1581b37ff65802.
- 01:23 PM bug #6666 (Closed): Exception in SearchResultView when starting the Taxeditor
- 12:54 PM feature request #6665 (New): Add "Add specimen duplicate" context menu item to specimen editor
- WGB:
Auch hier wäre natürlich eine Möglichkeit, mehrere Specimen gleichzeitig zu Isotypen zu erklären, ausgesproc... - 12:51 PM feature request #5950: Add duplicate method for type designations
- possible duplicate of #6413
- 12:35 PM task #6660: Remove unique index from Rights MN tables
- Applied in changeset commit:cdmlib|8effc06ef3ae6540a8e1db60d9ada7757105c76c.
- 12:01 PM bug #6383: fatal error on git push: The remote end hung up unexpectedly
- it happened again when pushing the merge of a hotfix into develop (commit:cdm-vaadin|d825f4bf)
~~~
git push
Open... - 09:48 AM bug #6664: Deleting often does not succeed without throwing an exception
- Observed also in several versions before 4.7
- 09:47 AM bug #6664 (Closed): Deleting often does not succeed without throwing an exception
- I did now observe several times that when deleting multiple objects (of the same type) in bulk editor the delete some...
- 12:28 AM feature request #6663 (Resolved): Add required attributes to Reference to include externally managed references
05/21/2017
- 10:52 PM feature request #6663 (Closed): Add required attributes to Reference to include externally managed references
- The required attributes were discussed in BDI Monday meeting (http://wiki.bgbm.org/bdinotes/index.php/BDI_196). They ...
- 10:42 PM feature request #6467 (Duplicate): [DISCUSS] Abbreviated first name for person
- 10:36 PM feature request #6661 (Resolved): Add initials to Person
- 02:15 PM feature request #6661 (Closed): Add initials to Person
- Usually initials are the first letters of each firstname. However, there are exceptions for East Asian names with 2 l...
- 10:34 PM feature request #6662 (Resolved): Adapt person formatting, set initials behind lastname
- 10:10 PM feature request #6662 (Closed): Adapt person formatting, set initials behind lastname
- ... so it looks more like in bibliographic reference usage.
At the same time keep the old formatting as fulltitle ... - 02:09 PM task #6660 (Resolved): Remove unique index from Rights MN tables
- 12:18 AM task #6660 (In Progress): Remove unique index from Rights MN tables
- 12:15 AM task #6660 (Closed): Remove unique index from Rights MN tables
05/20/2017
- 03:31 PM feature request #6659 (Closed): Show mediaCreated in dataportal
- The field Media.mediaCreated is currently not shown in the dataportal but should. It should be added to the image gal...
- 03:24 PM feature request #6658 (Closed): Make mediaCreated editable in Media view
- Media has beside CdmBase.created another data called Media.mediaCreated.
This needs to be editable but currently i...
05/19/2017
- 08:11 PM bug #6657 (Worksforme): Reproducable "multiple representations" exception for polytomous keys
- When trying to exchange or delete the taxon link in a polytomous key you get an multiple representations exception:
... - 02:23 PM feature request #6653 (Closed): add more base maps to the data portal
- 02:23 PM feature request #6653 (Resolved): add more base maps to the data portal
- Applied in changeset commit:cdm-dataportal|4213b101b6fdf713976ef08afbdaaa1ca443f825.
- 11:05 AM feature request #6653 (Closed): add more base maps to the data portal
- Maps to be added:
* http://maps.stamen.com/#terrain
* https://opentopomap.org/#map=8/37.7577/23.0109
Also ad... - 01:48 PM feature request #6656 (Resolved): Make autonym hybrids parsable
- Applied in changeset commit:cdmlib|607c4d511b7dacb25760d4dc6c42df10b3c5b8ef.
- 01:01 PM feature request #6656 (In Progress): Make autonym hybrids parsable
- 01:00 PM feature request #6656 (Closed): Make autonym hybrids parsable
- e.g. Ophrys ×kastelli E. Klein nothosubsp. kastelli or
Ophrys ×baumanniana Soó nothosubsp. baumanniana
Serapias ×... - 11:54 AM feature request #6655 (Rejected): Implement a RegistrationManager with state machine
- ## RegistrationManager
**UPDATE: this idea has been rejected in favour of granting per entity permissions to subm... - 11:30 AM feature request #6654 (Closed): implement a CdmPermissionVoter for Registrations
- Registrations need to be protected by a RegistrationsVoter which evaluates CRUD permissions given to users or Groups...
05/18/2017
- 04:35 PM bug #6652 (New): [Discuss] misapplied names: hide protologue icon
- a.mueller:
> Zu Misapplied Name: Verstehe ich das richtig, dass du auch folgende Anzeige falsch findest:
![](i... - 04:30 PM bug #6651 (Closed): the protologue icon should be shown directly after the nomenclatural reference
- 04:29 PM bug #6651 (Resolved): the protologue icon should be shown directly after the nomenclatural reference
- Applied in changeset commit:cdm-dataportal|c266a8feb496e41c39d4e9bb4a97670db9bcc092.
- 04:23 PM bug #6651 (Closed): the protologue icon should be shown directly after the nomenclatural reference
- ![](image001.png)
![](image002.png)
Der Link zum “Protolog” steht nach der sec. Referenz – das erweckt den Eind... - 03:40 PM bug #6650 (New): Hide empty Bibliography block
- The bibliography block is always shown even if it is empty - better hide the empty block
- 02:45 PM bug #6192: taxon annotations only shown when 'Show accepted taxon on top of the synonymy' is enabled
- Andreas Kohlbecker wrote:
> During the BGBM User-Group meeting we decided to place a footnote key at the page title.... - 02:01 PM bug #6192: taxon annotations only shown when 'Show accepted taxon on top of the synonymy' is enabled
- During the BGBM User-Group meeting we decided to place a footnote key at the page title.
The footnode text will be... - 02:32 PM feature request #6649 (New): search results: accepted taxa, synonyms, excluded, incertae sedis and douptful taxa need to be clearly distinguishable
- * accepted Taxa: `font-weight=bold`
* synonyms: `font-weight=normal`
* excluded: prefix taxon title cache with `[e... - 02:27 PM feature request #6648 (New): Display of excluded and incertae sedis information in the taxon page
- ## Display of **excluded**:
* show **excluded from {parent taxon} in {classification}** below page title
* option... - 02:22 PM feature request #6647 (New): Search filters for excluded and incertae sedis
- * implement search filters for excluded and incertae sedis for
* advanced search
* simple search
* provide op... - 11:07 AM feature request #6646 (New): Reference of Taxonnode needs to be editable in Editor
- The Taxonnode has a reference which needs to be editable
05/17/2017
- 06:34 PM bug #6608 (Resolved): Setting the 'Bounding box' for the OSM layer no longer works
- Applied in changeset commit:cdm-dataportal|46de7f4cd0ac2f2b6900ad117d370dbd1a25566c.
- 06:33 PM bug #6608: Setting the 'Bounding box' for the OSM layer no longer works
- update it works in the release 4.7.0 in a limited way:
setting `8.931641,30.067916,39.341797,47.039254` causes the... - 05:18 PM bug #6645 (Closed): area data parameter missing in portal/description/distributionInfoFor response
- This problem seems to be specific to the Fauna Europaea data.
http://test.e-taxonomy.eu/cdmserver/fauna_europa... - 05:09 PM bug #6383: fatal error on git push: The remote end hung up unexpectedly
- The remote: lines disppear if the curl command in the post-commit hook is started with the `-s` option.
Changing t... - 04:43 PM bug #6383: fatal error on git push: The remote end hung up unexpectedly
- It occurred once again, this time we have a debug log:
~~~
git push
OpenSSH_6.6.1, OpenSSL 1.0.1f 6 Jan 2014
de... - 04:00 PM feature request #6644 (New): Adapt sortindex updater and cache updater to new ImportResult infrastructure
- 02:20 PM bug #6214: Add project specific preferences to CdmPreference menu
- I do not understand why
- 02:02 PM bug #6643 (New): fix message shown in case the shown taxon is not in the chosen classification
- Wenn man dann den Namen in der nicht-dargestellte Klassifikation auswählt, erhält man den korrekten Record, aber mit ...
- 01:50 PM bug #6078 (Resolved): import of references in specimen search
- needs to be checked if really everything is imported correctly
- 01:45 PM task #6612: Implement dao and service class for Registrations
- As this is in the model change branch it goes into 4.8
- 01:30 PM feature request #6573 (Closed): Option to define a wms overlay layer for the openlayers map viewer
- released and tested - works as expected.
- 01:30 PM feature request #6642 (New): Map settings: TextArea for defining the sld_body
- Implement TextArea in which the Admin can supply sld for the wms base and overlay layers
User sld_body or sld wms ... - 01:23 PM feature request #6636 (Resolved): First version of RIS reference import (e.g. for Endnote import)
- First version is implemented. Move open issues to new ticket for 4.8
- 10:58 AM feature request #6636: First version of RIS reference import (e.g. for Endnote import)
- the IOResultBase needs to implement Serializable otherwise the attributes of the superclass are not transmitted.
- 12:54 PM bug #6281 (Closed): delete synonym with annotations throws exception
- added the test and close the ticket
- 11:02 AM bug #6281: delete synonym with annotations throws exception
- There is a test on cdmlib side but no at editor side. I will create one.
- 11:00 AM feature request #6640 (Resolved): Integrate RIS Import in taxEditor
- the problem with the not transmitted parts of the result is fixed by revision 529e3037
05/16/2017
- 05:51 PM bug #6562: vaadin mvp framwork presenters without view
- This problem is causing the presenters to receive EditorSaveEvent from foreign views.
- 04:55 PM bug #6383: fatal error on git push: The remote end hung up unexpectedly
- to day it is more severe than before a lot of release jobs have failed due to this in the final step of committing th...
- 02:00 PM feature request #6640: Integrate RIS Import in taxEditor
- The integration is done, but there is a problem with the IOInfo List (i.e. warnings), they are filled till the Import...
- 10:08 AM feature request #6640 (In Progress): Integrate RIS Import in taxEditor
- 09:16 AM feature request #6640 (Closed): Integrate RIS Import in taxEditor
- The RIS Import should be available in TaxEditor
- 10:17 AM bug #6641 (New): On single tab pages the bibliography is not shown on the bottom
- If specimen, images or keys come after "general" in the tab order of a single tab (no tab) taxon page the bibliograph...
05/15/2017
- 02:52 PM bug #6639 (Closed): Context menu of Specimen Editor is missing entries
- 02:48 PM bug #6639 (Resolved): Context menu of Specimen Editor is missing entries
- Applied in changeset commit:taxeditor|0628723f829ddc244bedfe48ce9ffdff9e6531d1.
- 02:44 PM bug #6639 (Closed): Context menu of Specimen Editor is missing entries
05/12/2017
- 04:44 PM bug #6454 (Closed): NumberWithLabelElement.getFloat and .getInteger should return null
- I guess this is solved because nobody ever complained after this fix so it seems like all number fields seem to work ...
- 04:40 PM bug #6214 (Closed): Add project specific preferences to CdmPreference menu
- This works fine.
@Katja: Could you adjust the target version if this was already solved in 3.6? - 04:25 PM bug #6582: status bar not completely visible
- It is visible in height but you still have wiggle on the separator to make it fully visible in width.
- 04:01 PM bug #6614 (Closed): cdm_taxontree: plus/minus/loading gifs not correctly loaded
- Sorry, forgot that I was supposed to merge it in develop.
What would be a more appropriate Subject line? - 02:27 PM bug #6385 (Closed): Specimen Editor should handle new search same as bulk editor
- seems fine
- 01:56 PM bug #6638 (New): Close import wizard after showing "Open Editors" warning
- 01:53 PM feature request #6637 (New): Sort derivatives below FieldUnit level in specimen editor
- 09:17 AM feature request #6576 (Closed): Implement operation that guesses all basionyms for a syonymy
- looks fine.
05/11/2017
- 05:59 PM bug #6614: cdm_taxontree: plus/minus/loading gifs not correctly loaded
- So can we close the ticket?
And can you please adapt the "Subject" in a way that it is easier to read for standard... - 03:20 PM bug #6614: cdm_taxontree: plus/minus/loading gifs not correctly loaded
- I finally merged the branch into develop
- 05:50 PM feature request #6636: First version of RIS reference import (e.g. for Endnote import)
- https://jira.sakaiproject.org/secure/attachment/21845/RIS+Format+Specifications.pdf
https://en.wikipedia.org/wiki/... - 05:33 PM feature request #6636 (Closed): First version of RIS reference import (e.g. for Endnote import)
- 03:56 PM bug #6214: Add project specific preferences to CdmPreference menu
- Is this solved? If yes, was it solved in 4.6 or 4.7?
- 03:22 PM bug #6078: import of references in specimen search
- is this fixed/related to other ABCD import tickets?
- 02:09 PM feature request #6619 (Resolved): Integrate Excel distribution import into taxeditor
- Applied in changeset commit:taxeditor|9313d25a2e00e474498e2713f4cb0b44245b37b1.
- 11:40 AM task #6590: Check if CdmVaadinAuthentication is a proper solution for handling authentications and SecurityContexts
- yes it is!
- 11:18 AM task #6590: Check if CdmVaadinAuthentication is a proper solution for handling authentications and SecurityContexts
- is this still an open issue?
- 11:01 AM bug #6281: delete synonym with annotations throws exception
- Katja Luther wrote:
> I really tried different solutions with saving, reloading, updating but the only way to avoid ... - 09:25 AM bug #6281: delete synonym with annotations throws exception
- I really tried different solutions with saving, reloading, updating but the only way to avoid the exception was the f...
- 10:51 AM feature request #5088: Redirect automatically to according page when search result has exactly one matching item
- Don't know why it is moved to Reviewed. As it is a request from several users I would keep it in Unassigned so we can...
- 08:37 AM feature request #5088 (New): Redirect automatically to according page when search result has exactly one matching item
- No *feedback* is currently needed, I rather would set the state of the ticket to **new**, *in progress* also makes no...
- 10:44 AM bug #6480 (Resolved): Re-saved by cascade in specimen bulk editor
- 10:43 AM bug #6480 (Feedback): Re-saved by cascade in specimen bulk editor
- sorry, did not see that the problem was in bulkeditor. now I added the delete configurator to the bulk editor delete ...
- 10:39 AM bug #6480 (Resolved): Re-saved by cascade in specimen bulk editor
- Applied in changeset commit:cdmlib|07dbf1bcf8687df44cd3e5fcb90acedb4a6a71f6.
- 10:17 AM task #6510 (In Progress): Import Rank labels in German and Latin
- 10:16 AM feature request #6516 (In Progress): Add instance name and instance ID to CDM meta data
- 09:26 AM bug #6530: After editing a nomenclatural reference of a new created name some information is lost
- please review
- 09:12 AM feature request #6531 (Closed): Add WFO Name Identifier to Identifier Types
- works
- 12:02 AM feature request #6531: Add WFO Name Identifier to Identifier Types
- Please review
- 09:09 AM feature request #6524 (Closed): Distribtion Update for Fauna Europaea
- 09:09 AM feature request #6524: Distribtion Update for Fauna Europaea
- the import works fine, the remaining issues are moved to a follow up ticket.(#6635)
- 09:09 AM feature request #6635 (New): Remaining fauna europaea distribution update issues
- * make configurable if Description should be created anew or if the old one(s) should be reused (difficult if multipl...
- 09:05 AM bug #6570 (Resolved): rank list should be sorted
- Applied in changeset commit:taxeditor|3271c92d309b7cd7086c5b5ebd58632906f1361b.
- 08:59 AM bug #6570: rank list should be sorted
- The map is a treemap, this is a sorted map.
- 08:31 AM bug #6122 (Closed): add titleCache service
- 08:30 AM bug #6111 (Closed): invalid SQL (MySQLSyntaxErrorException) during call to CdmEntityDaoBase.list()
- 08:24 AM bug #6115 (Closed): protect cdm content by drupal permission
- 08:22 AM bug #6255 (Closed): jenkins job cdm-webapp-HFX-FINISH fails due to merge conflict
- all done and cleaned up - closing the ticket
- 08:20 AM bug #6354 (Closed): Advanced search: non phrase search with wildcard broken
- this is fixed even if the advanced search in the portal still is broken when using wildcards, this however is another...
- 08:18 AM bug #6634 (New): Advanced search: DataPortaL always does a phrase search
- Wildcards cannot be used in the advanced search since the portal always creates a phrase search string:
* test ent... - 08:07 AM task #6512: document eu.etaxonomy.cdm.model.common.IIdentifiableEntity.generateTitle()
- the given documentation is sufficient - ticket closed
- 08:05 AM bug #6628 (Closed): require vaadin UIs to be explicitely enabled per cdm-webapp instance
05/10/2017
- 11:58 PM feature request #6541 (Resolved): Implement ImportResult
- 11:57 PM feature request #6633 (New): Check all imports if import result is filled correctly
- 11:50 PM task #6612 (Closed): Implement dao and service class for Registrations
- From the code it looks ok. I cleaned up some generics.
- 11:14 PM feature request #6576: Implement operation that guesses all basionyms for a syonymy
- Please review
- 11:11 PM feature request #6632 (New): Implement basionym guesser for 2 taxa/names and/or a homotypical group only
- see #6576 for base implementation.
The further implementations may be needed for #6631 (implement in Name Editor) - 11:08 PM feature request #6631 (New): Implement basionym guessing in TaxEditor
- We may want to use the basionym guessing functionality (#6576) available in the Name Editor. It might be available vi...
- 10:46 PM bug #6281: delete synonym with annotations throws exception
- Anyway, the above solution seems to work for the given problem. At least, I can't reproduce any exception. Maybe you ...
- 10:44 PM bug #6281 (Feedback): delete synonym with annotations throws exception
- For me the flush feels like a dirty solution, but maybe I am wrong. I also remember that I ran into some kind of prob...
- 09:08 PM task #2494 (New): replace garland_cichorieae_cdm_taxon_list_thumbnails by settings
- 09:06 PM task #5285 (Closed): Use Vaadin Spring Add-on
- 08:52 PM feature request #6619 (Feedback): Integrate Excel distribution import into taxeditor
- The wizard can still be improved:
1. The import should show up only if "show experimental features" is switched on... - 08:09 PM feature request #3533 (Feedback): Prefill nomenclatural reference information if possible
- Seems to work, but maybe also Eckhard should have a look as it is an E+M requirement.
>Also the type of the refere... - 07:48 PM bug #6480 (Feedback): Re-saved by cascade in specimen bulk editor
- I still get the exception. Here is what I do in a bit more detail:
1. Open Specimen-Editor
1. Create FieldUnit wi... - 10:23 AM bug #6480: Re-saved by cascade in specimen bulk editor
- please review
- 07:20 PM bug #6540 (Closed): After changing type of reference the dialog is empty
- Looks ok
- 07:01 PM bug #6620 (Closed): [MASTER] Critical Eclipse 4 bugs
- All subtasks closed.
- 07:00 PM bug #6579 (Closed): user and usergroup menu item is missing
- looks good
- 06:59 PM bug #6604 (Closed): NPE when having simple details view switched on
- looks fine
- 06:56 PM bug #6570 (Feedback): rank list should be sorted
- Unfortunately it is still in the wrong order. From the code https://dev.e-taxonomy.eu/redmine/projects/edit/repositor...
- 06:35 PM feature request #4867 (Resolved): Add menu item for subtree cloning
- 05:57 PM task #6630 (Closed): Unify TaxonName cache strategies
- Currently we do have a name cache strategy for each taxon name sub-classes. The default cache strategy should be merg...
- 02:35 PM bug #6629: TransmissionEngineDistribution misses aggregating Uzebkistan (UZB-OO) to higher rank levels
- I checked the data using the Editor and also did not find anything unusual which could cause the transmission engine ...
- 02:31 PM bug #6629 (Closed): TransmissionEngineDistribution misses aggregating Uzebkistan (UZB-OO) to higher rank levels
- Hallo,
ich habe gerade festgestellt, dass ältere Verbreitungsdaten (von 2013) in bestimmten Fällen bis heute nich... - 11:27 AM bug #6493 (In Progress): Another reproducable "multiple representations" exception for name relationships
- sometimes it works and sometimes not...
rebuild the usecase described above it works, but after closing, reopening, ... - 10:59 AM bug #6385: Specimen Editor should handle new search same as bulk editor
- now cdmEntitySession.dispose() is called instead of editor.dispose(), so that only the session is closed, this metho...
- 10:59 AM bug #6385 (Resolved): Specimen Editor should handle new search same as bulk editor
- Applied in changeset commit:taxeditor|9fc9ae69cbb0ca2fbed964533758650322160c6a.
- 10:12 AM bug #6530: After editing a nomenclatural reference of a new created name some information is lost
- The problem is that if the object loaded in the details wizard has id = 0.
When the wizard is closed, it is not save... - 10:11 AM bug #6530 (Resolved): After editing a nomenclatural reference of a new created name some information is lost
- Applied in changeset commit:taxeditor|dcff61a3a09069d6bbbc5eb38966ac8e32e952bf.
05/09/2017
- 11:19 PM task #6612: Implement dao and service class for Registrations
- ... Done! Please review.
- 10:49 AM task #6612: Implement dao and service class for Registrations
- Andreas Kohlbecker wrote:
> a.mueller:
> 2) Ich verstehe die Konstruktion mit der Map nicht so ganz. Wenn Propert... - 10:40 AM task #6612: Implement dao and service class for Registrations
- a.mueller:
Habe die Implementierung gerade überflogen. 2 Fragen:
1) Sollten wir die alte Signatur nicht weiterh... - 06:49 PM feature request #3665: Further implementation of original spelling name caching
- AM: … achso, noch eine Frage: hattest du die Anführungszeichen bewusst so gewählt? Also http://www.fileformat.info/in...
- 06:30 PM task #6535 (Resolved): MetaDataPropertyName from number to string in DB
- Applied in changeset commit:cdmlib|cfe723e5bc6869c8bc0416308c54bd5caad20d2a.
- 10:48 AM task #6535 (In Progress): MetaDataPropertyName from number to string in DB
- 03:09 PM bug #6530: After editing a nomenclatural reference of a new created name some information is lost
- Katja Luther wrote:
> Could not reproduce it anymore.
if the taxon is not saved before editing the reference the ... - 03:09 PM bug #6530 (In Progress): After editing a nomenclatural reference of a new created name some information is lost
- 03:06 PM bug #6530 (Worksforme): After editing a nomenclatural reference of a new created name some information is lost
- Could not reproduce it anymore.
- 02:49 PM bug #6511 (Rejected): Handling of objects being referenced in a InTextReference during deleting
- Reject the ticket because it works without special handling.
Tested whether the intext references are also deleted a... - 02:13 PM feature request #6166 (Closed): In ABCD import also import all siblings of a culture or tissue sample
- 01:51 PM feature request #6399 (Closed): Add admin property frequently used biocase provider
- 01:47 PM bug #6214 (Resolved): Add project specific preferences to CdmPreference menu
- 01:45 PM bug #6219 (In Progress): Deleting synonym is persisted immediately, but the editor is set dirty
- 01:41 PM bug #6540 (Resolved): After changing type of reference the dialog is empty
- 01:06 PM bug #6582 (Resolved): status bar not completely visible
05/08/2017
- 11:23 PM feature request #6581: Make all microreferenced references OriginalSources
- AK: > Viel besser sollten wir das im ValidationFramework als Rule definieren.
+1
das Ticket https://dev.e-taxono... - 09:50 PM bug #6628 (Resolved): require vaadin UIs to be explicitely enabled per cdm-webapp instance
- Applied in changeset commit:cdm-vaadin|10f9654c14ed8f93e981b79c0188d50034e19378.
- 04:09 PM bug #6628 (Closed): require vaadin UIs to be explicitely enabled per cdm-webapp instance
- There are reasons why it is crucial that vaadin applications are inactive in cdm-webapp instances per default unless ...
- 03:53 PM feature request #6314: CDM light (csv) export implemented
- close this ticket because the topics from the first definition of the outputmodel is implemented. Create a new ticket...
- 03:50 PM feature request #6314 (Resolved): CDM light (csv) export implemented
- Applied in changeset commit:cdmlib|53eeb3a2d4d2fd8d85b8b60bf19d40072e0f1c81.
- 03:53 PM bug #6627 (Closed): Remaining cdm light issues
- * Instance name and instance ID
* ~~TitlePageYear~~ (in 5.0)
* ~~support for misapplied names~~ (in 5.0)
* ~... - 03:47 PM feature request #6519 (Resolved): Implement ExportResult
- The implementation of ExportResult should be finished, we should check all exports if the result is filled correctly....
- 03:47 PM feature request #6626 (New): Check all exports if the exportResult is filled correctly
- Check all existing exports if they fill the exportResult correctly and all informations are available.
05/06/2017
- 10:54 AM feature request #6368 (In Progress): Merge all TaxonNameBase classes, remove DTYPE, rename table
- 10:53 AM feature request #6368: Merge all TaxonNameBase classes, remove DTYPE, rename table
- Also update value for anamorphic from NULL to false
05/05/2017
- 05:47 PM task #6612: Implement dao and service class for Registrations
- AK: mit ist noch eine zusätzliche Anforderung an die Service Methoden eingefallen:
Beide Methoden in IRegistration... - 05:45 PM task #6612 (Resolved): Implement dao and service class for Registrations
- 03:04 PM feature request #4452 (Closed): p2 update problem with nebula compositetable dependency
- Updating the nightly build works fine
- 02:29 PM feature request #4867: Add menu item for subtree cloning
- This is most probably solved depending on how the implementation in cdmlib looks like. For now, all available paramet...
- 02:13 PM bug #6582: status bar not completely visible
- this seems to be an eclipse bug: https://bugs.eclipse.org/bugs/show_bug.cgi?id=471313
- 02:12 PM task #6625 (New): three different namings for descriptions in Campanula production: Campanula celsii
- Please have a look at the data and maybe merge the different descriptions if possible
- 02:10 PM feature request #6624 (Duplicate): Campanula related portal issues
- * Add default value (barcode of specimen > "scan x") to thumbnail label for specimen scans (motif can often be empty ...
- 01:48 PM bug #6281 (Resolved): delete synonym with annotations throws exception
- 01:48 PM bug #6281 (In Progress): delete synonym with annotations throws exception
- the last comment seems to contain the solution, after removing the synonym from the taxon, we have to call a flush. t...
- 01:46 PM bug #6281 (Resolved): delete synonym with annotations throws exception
- Applied in changeset commit:cdmlib|61f0bdd22eed3defc1208178541cb8097acde82b.
- 01:30 PM bug #6281: delete synonym with annotations throws exception
- Only the deletion of synonym associated to a taxon throws this exception, a synonym created in bulkeditor can be dele...
- 01:44 PM bug #6539 (Closed): Build problems for taxeditor post 4.6 release
- Ticket can be closed. The whole build pipeline works fine after migration to eclipse 4.
- 01:41 PM bug #6579 (Resolved): user and usergroup menu item is missing
- Applied in changeset commit:taxeditor|a36d109cc808d3f8ae42a0b2d2396b8ae6554010.
- 01:34 PM bug #6623 (Closed): formatter for bibliografic citations with citationDetail
- The cdmlib misses providing string representations for References + referenceDetail. This is needed for the reference...
- 12:08 PM feature request #6566 (Closed): Migrate main menu
- Created a ticket for remaining issues. #6622
Closing this one. - 12:03 PM feature request #6622 (Closed): Migrate remaining main menu items
- Already migrated items:
* General
* Close
* Close all
* Save
* Save all
* Import
* Export
* Con... - 11:19 AM feature request #6619 (Resolved): Integrate Excel distribution import into taxeditor
- Applied in changeset commit:cdmlib|4da4f88a682075705c6483be60ef0013a77d0a8d.
- 08:50 AM feature request #6367 (Resolved): Make NomenclaturalCode an attribute ("type") of TaxonNameBase
- Applied in changeset commit:cdmlib|7c119bdff8d4c68a920bc139db192df0749e9419.
- 12:23 AM task #6258: Add Registration to cdm model
- Andreas Müller wrote:
> Andreas Kohlbecker wrote:
> > when accessing persisted Registration I get this error:
> > ... - 12:06 AM task #6258 (Resolved): Add Registration to cdm model
- 12:05 AM task #6258: Add Registration to cdm model
- Andreas Kohlbecker wrote:
> when accessing persisted Registration I get this error:
>
should be fixed with 4c8d...
05/04/2017
- 11:00 PM feature request #6617 (Resolved): Add "Exact Value" to StatisticalMeasure
- 10:45 PM task #6258 (Feedback): Add Registration to cdm model
- when accessing persisted Registration I get this error:
~~~
java.lang.IllegalArgumentException: EnumType Registra... - 10:33 PM feature request #6618 (In Progress): Add link to Structure, Property, Method(?) and Type(?)
- 02:47 PM feature request #6577 (Closed): Make sp. nov. parsable
- seems to work.
- 02:30 PM bug #6539 (In Progress): Build problems for taxeditor post 4.6 release
- 02:20 PM feature request #4867: Add menu item for subtree cloning
- Please define open issues
- 02:02 PM feature request #6566 (Resolved): Migrate main menu
- Please create new ticket for open issues.
- 01:39 PM bug #6556 (Rejected): After restart of the editor the previous views show errors
- Won't fix because too much work. Exception occurs only once after upgrade. So we need to inform the users that the ex...
- 01:15 PM bug #6620 (In Progress): [MASTER] Critical Eclipse 4 bugs
- 01:13 PM bug #6620 (Closed): [MASTER] Critical Eclipse 4 bugs
- 11:12 AM feature request #6619 (In Progress): Integrate Excel distribution import into taxeditor
- 11:12 AM feature request #6619 (Resolved): Integrate Excel distribution import into taxeditor
- Now the import of updated distribution data is finished we have to integrate it into the taxeditor
- 09:37 AM feature request #6524: Distribtion Update for Fauna Europaea
- Saskia sent a corrected version of the file.
- 09:33 AM feature request #6616 (Feedback): Question/Discussion: update supported jquery version and remove old/unused js code?
- 09:32 AM feature request #6616: Question/Discussion: update supported jquery version and remove old/unused js code?
- > What is the currently supported jquery version and are there plans to update it?
We use the version provided by Dr... - 09:21 AM bug #6570: rank list should be sorted
- Hallo Katja,
du hattest doch glaube ich an der Reihenfolge der Ränge im Name Bulkeditor beim Anlegen eines neuen N... - 09:11 AM bug #6614 (Feedback): cdm_taxontree: plus/minus/loading gifs not correctly loaded
- Hi Saskia,
thank you for the bugfix. The commit looks good, please merge the changes into the develop branch.
A... - 12:54 AM bug #6579: user and usergroup menu item is missing
- If you do add the separator could you please also add separator in "Show View" before "Referencing objects"?
- 12:16 AM bug #6579 (Feedback): user and usergroup menu item is missing
- works for me too. Only open issue: separators before "User" are still missing.
- 12:41 AM bug #6088 (Closed): New reproducable multiple representations exception for name relationships
- Seems to work
- 12:27 AM task #6557 (Closed): Import Bogota data
- 12:20 AM bug #6586 (Closed): Duplicate menu items in name editor context menu
- Seems to be fixed
- 12:19 AM bug #6587 (Closed): Wrong order of "Window" menu
- 12:14 AM bug #6584 (Closed): Remove annotation and Editor navigation from perspectives/toolbar
- 12:01 AM feature request #6541 (In Progress): Implement ImportResult
05/03/2017
- 08:38 PM feature request #6618 (Closed): Add link to Structure, Property, Method(?) and Type(?)
- Characters / Features need to link to Structures and Properties to define them within an Ontology of structures and p...
- 08:26 PM feature request #6617 (In Progress): Add "Exact Value" to StatisticalMeasure
- 08:26 PM feature request #6617 (Closed): Add "Exact Value" to StatisticalMeasure
- 07:00 PM feature request #6616 (Feedback): Question/Discussion: update supported jquery version and remove old/unused js code?
- What is the currently supported jquery version and are there plans to update it?
I actually use jQuery/jQueryUI 1.... - 06:22 PM bug #6614 (Closed): cdm_taxontree: plus/minus/loading gifs not correctly loaded
- When navigating the taxontree the small icons to close/expand the subtree disappear. The regex misses to match a ".
... - 06:20 PM discussion #6613 (Closed): Interesting examples for good documentation
- Check if these are somehow useful for us
https://www.infoq.com/articles/ci-rest-docs?utm_source=infoqWeeklyNewslet...
05/02/2017
- 03:49 PM task #6612 (Closed): Implement dao and service class for Registrations
- open issue:
* status collection not yet evalutaten in service.page(submitter, includedStatus, ...) - 09:35 AM task #5123 (Closed): Integrate remoting capability in Checklist Editor
- checklist editor works in remoting, so we can close this ticket.
- 09:27 AM bug #6609: Google Map layers are not working
- it seems as if the key is being accepted but in the java script console the following error is reported
~~~
unca... - 09:20 AM bug #6609 (New): Google Map layers are not working
there is a bug in openlayers 2.13 which is fixed in openlayers 2.14-dev, this version used in the examples http://d...- 09:26 AM bug #6584 (Resolved): Remove annotation and Editor navigation from perspectives/toolbar
- Applied in changeset commit:taxeditor|261ccfdd0ab714407c5a784a0835ada1eb20d72e.
- 09:19 AM bug #6608 (Closed): Setting the 'Bounding box' for the OSM layer no longer works
04/30/2017
04/29/2017
- 01:00 AM feature request #6529 (Resolved): Extend WorkingSet to allow a more fine grained definiton of taxon set
- 12:59 AM task #6258 (Resolved): Add Registration to cdm model
- 12:46 AM feature request #5021: TreeNodeDropAdapterAssistant should use RemotingMoveTaxonNodeHandler
- is this still an open issue?
- 12:44 AM task #5123: Integrate remoting capability in Checklist Editor
- once this is closed we can also close the according parent / master ticket
- 12:30 AM task #5123 (In Progress): Integrate remoting capability in Checklist Editor
- 12:30 AM task #5123 (New): Integrate remoting capability in Checklist Editor
- is this still an open issue?
- 12:40 AM bug #5279: Deleting taxon node is slow in some cases
- is this still an open issue?
- 12:34 AM bug #5278: Creating new taxon is slow in some cases
- can you please check if this is still an open issue?
- 12:32 AM bug #5417: Search not working correctly in Bulk Editor
- Patrick, Katja, could you please check if this is still an open issue
- 12:28 AM task #5129: Implement export for remoting
- is this still an open issue?
- 12:16 AM task #6557: Import Bogota data
- Created new ticket for specimen data #6606.
Still need to add logfile mail to Grischa and then can close this ticket. - 12:13 AM task #6606 (Closed): Import Bogota specimen data
- Test dataset available at //BGBM-PESIHPC/Bogota/test-data-edit-20170605.xlsx
- 12:10 AM bug #6600: Entering User and Person throws Duplicate Entry exception
- maybe this was caused by a previous corrupt hibernate_sequence for AuditEvent (#6605)
04/28/2017
- 11:57 PM feature request #6524: Distribtion Update for Fauna Europaea
- I tested against FauEu on test server. So the result can be seen there, but it is not the final state as there were s...
- 11:56 PM feature request #6524 (Resolved): Distribtion Update for Fauna Europaea
- Katja, first version is ready and seems to work. Could you please review.
- 03:21 PM task #6258: Add Registration to cdm model
- I think NomenclaturalAct is a broader term then Registration. It is also valid for existing NomenclaturalActs in publ...
- 11:52 AM task #6258: Add Registration to cdm model
- After the discussion this week I am thinking about renaming the `Registration` class to `NomenclaturalAct`, this term...
- 09:54 AM bug #6604 (Resolved): NPE when having simple details view switched on
- Applied in changeset commit:taxeditor|19b95653738a40917e5f4b9844ac71e001f6896c.
04/27/2017
- 05:39 PM bug #6303: distribution map is moving too fast
- Hi Gabi this is fixed, please confirm by testing in the test portal: http://test.e-taxonomy.eu/dataportal/preview/cor...
- 05:38 PM bug #6303 (Resolved): distribution map is moving too fast
- Applied in changeset commit:cdm-dataportal|79f1762dab1ce9d2896a8e654675b40cc9eaf16d.
- 05:19 PM bug #6303: distribution map is moving too fast
- this seems to happen only when using the base layer "Metacarta Vmap0 (OSGeo server) - via fast EDIT MapProx" together...
- 04:38 PM bug #6605 (New): Repair mechanism for hibernate_sequences
- The hibernate_sequences are sometimes corrupted (e.g. today it happened in the flora bogota that the AuditEvent that ...
- 04:22 PM bug #6604 (Closed): NPE when having simple details view switched on
- ~~~
login : admin
editor version : 4.6.0
server : api.cybertaxonomy.org (cybertaxonomy.org) / flora-bogota
schema... - 03:15 PM bug #6603 (New): Exception Dialog for deletion of taxonNode does not show the stack trace
- 03:02 PM feature request #6573: Option to define a wms overlay layer for the openlayers map viewer
- review after the release by using teh following settings for flora-hellenica:
**baselayer wms:**
* WMS url: htt... - 02:54 PM feature request #6573 (Resolved): Option to define a wms overlay layer for the openlayers map viewer
- Applied in changeset commit:cdm-dataportal|cb961f9df877d9b4677bb65ad84c63695ab3d77f.
- 02:44 PM feature request #6602 (New): Add recreation of treeindex to the tree repair mechanism
- I just had the problem that an exception was thrown during creation of a new taxon node. After reopening the Editor t...
- 02:27 PM bug #6601 (New): NPE when trying to drag&drop classification to rights editing form
- I tried to edit rights for user group "Editor" in flora bogota by opening the rights editing form with right click me...
- 02:20 PM bug #6600 (New): Entering User and Person throws Duplicate Entry exception
- I tried to enter a new user and immediately add a person to it in flora bogota. When trying to save the user afterwar...
- 01:50 PM feature request #6599 (New): [DISCUSS] Use logging facade instead of log4j
- AK:
Da wir schon beim Thema Logging sind:
Warum verwenden wir in der CDMLib eigentlich keine logging facade (SLF... - 01:27 PM feature request #6166 (Resolved): In ABCD import also import all siblings of a culture or tissue sample
- 12:36 PM feature request #3665: Further implementation of original spelling name caching
- WGB: ich würde das Thema dann doch gerne noch mal zur Diskussion stellen. Das mit den einfachen Anführungszeichen fin...
- 12:30 PM feature request #3665: Further implementation of original spelling name caching
- AM:
… achso, noch eine Frage: hattest du die Anführungszeichen bewusst so gewählt? Also http://www.fileformat.info... - 12:15 PM feature request #6314: CDM light (csv) export implemented
- Katja Luther wrote:
> Discuss whether we should handle the citation facts seperate to the other simple facts because... - 10:51 AM feature request #6314: CDM light (csv) export implemented
- Facts containing only media data we should move to an extra table.
- 10:36 AM feature request #6314: CDM light (csv) export implemented
- Discuss whether we should handle the citation facts seperate to the other simple facts because it is confusing that t...
- 06:54 AM feature request #6598 (Closed): Migrate commands and handlers
- Allow all handlers to handle single and multiple selection
- 06:53 AM feature request #6597 (Closed): Migrate Details View
- 06:53 AM feature request #6596 (Closed): Migrate specimen editor
- 06:52 AM feature request #6595 (Closed): Migrate name editor
04/26/2017
- 05:45 PM feature request #5752: Reduce TaxEditor size
- With the commit commit:taxeditor|d4e83e37febf32601f065390770060398ec63a80. I re-added the dependencies needed for cre...
- 01:00 AM feature request #3667 (In Progress): Implement correct implementation of original spelling in publications
- 12:56 AM feature request #3667: Implement correct implementation of original spelling in publications
- NK: ... Im genannten Fall hieße das: Abies alba Mill., ('allba'), also nach dem Literturzitat, dann ich auch eindeuti...
04/25/2017
- 11:08 PM feature request #3665: Further implementation of original spelling name caching
- RH (27-8-2013): da gibt es leider keine Empfehlungen und Konventionen. Die meisten Zeitschriften- und Monographie-Her...
- 10:53 PM feature request #3665: Further implementation of original spelling name caching
- AM: … und noch eine letzte aber wichtige Frage. Ihr habt ja nur den Fall Name und Autor dargestellt. Wichtig wäre zu ...
- 10:52 PM feature request #3665: Further implementation of original spelling name caching
- AM: … noch eine Frage: hattest du die Anführungszeichen bewusst so gewählt? Also http://www.fileformat.info/info/unic...
- 02:48 PM feature request #3665: Further implementation of original spelling name caching
- Hallo,
die Angabe der Originalschreibweise in einfachen Anführungszeichen ist nicht schön, da sie dann wie Ku... - 09:43 PM bug #6385 (Feedback): Specimen Editor should handle new search same as bulk editor
- 02:45 PM bug #6385: Specimen Editor should handle new search same as bulk editor
- You should not invoke dispose() on the part because this is a UI method which is used to free any resources like hand...
- 06:53 PM task #6591 (Closed): Use name used in source for original spelling
- See #3967 for further information
- 03:25 PM task #6590 (New): Check if CdmVaadinAuthentication is a proper solution for handling authentications and SecurityContexts
- CdmVaadinAuthentication has been implemented (#4844) to overcome the problem of parallel login into multiple vaadin U...
- 02:39 PM bug #6575 (Worksforme): Drag & Drop in features view does not work anymore
- Seems to be already solved. Also works for Katja.
Closing ticket as "Worksforme" - 02:22 PM task #6557: Import Bogota data
- Applied in changeset commit:cdmlib-apps|f7802e9485fc42ca4716224ffc524e5022effa4f.
- 02:12 PM bug #6579 (Resolved): user and usergroup menu item is missing
- 02:03 PM bug #6579 (Worksforme): user and usergroup menu item is missing
- Andreas: Please try again with the lates nightly and delete `.cdmLibrary/.metadata/.plugins/org.eclipse.e4.workbench/...
- 02:01 PM bug #6586 (Resolved): Duplicate menu items in name editor context menu
- Applied in changeset commit:taxeditor|2fdbc4e2980b34cfcc00a46604ebdf0d0e0642de.
- 01:32 PM bug #6587 (Resolved): Wrong order of "Window" menu
- Applied in changeset commit:taxeditor|c7cc7a1848ff05b381b13f6e06c40d3ef52e4f4d.
04/24/2017
- 10:59 PM bug #6436: [DISCUSS] TitleCache update strategy for related objects
- WGB:
oh je. Vielleicht noch eine zusätzliche Möglichkeit – ein „Update“ Knopf, der auf den Teil wirkt, der im Foku... - 10:46 PM feature request #6589: Handle protologue as original source with URI link
- WGB: Mir aufgefallen, dass die Angabe „Protolog“ im Editor Detail eigentlich nicht richtig ist, es geht ja eigentli...
- 10:18 PM feature request #6589 (Closed): Handle protologue as original source with URI link
- Once #6588 and #6581 is implemented we could move protologue information from NameDescription to nomenclatural refere...
- 10:45 PM feature request #6588: Add URL and URL comment to OriginalSource / ExternalLink
- AM: Frage hierzu: Reicht eine URL ohne lieber Möglichkeit, mehrere zu setzen. Beim „Protolog haben wir ja die Möglich...
- 10:34 PM feature request #6588: Add URL and URL comment to OriginalSource / ExternalLink
- WGB:
Ein Lektotype muss ja explizit designiert (publiziert!) werden – das ist dann m.A.n. die Referenz, die in der... - 07:24 PM feature request #6588 (Closed): Add URL and URL comment to OriginalSource / ExternalLink
- An original source may sometimes want to link to an external link where the reference (the page in the reference) is ...
- 10:34 PM bug #6434 (Duplicate): Add URL for TypeDesignation
- 10:33 PM feature request #6435 (Duplicate): [DISCUSS] Comment field for "Protolog"
- 07:26 PM bug #6585: Combo menu items have orange font
- Remove parent ticket as this is not an e4 issue only but existed already in e3
- 05:39 PM bug #6585 (Rejected): Combo menu items have orange font
- ![](image001.png)
- 06:26 PM bug #6587 (Closed): Wrong order of "Window" menu
- 06:25 PM bug #6586 (Closed): Duplicate menu items in name editor context menu
- 05:37 PM bug #6584 (Closed): Remove annotation and Editor navigation from perspectives/toolbar
- 05:34 PM bug #6583 (Rejected): perspective separator not movable
- 05:32 PM bug #6582 (Closed): status bar not completely visible
- 04:36 PM feature request #6581 (Closed): Make all microreferenced references OriginalSources
- Currently we have OriginalSource usually used for collections of sources while single references such as nomenclatura...
- 09:13 AM bug #6579 (Closed): user and usergroup menu item is missing
- in admin menu the items user and usergroup are missing
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