Activity
From 03/28/2017 to 04/26/2017
04/26/2017
- 05:45 PM feature request #5752: Reduce TaxEditor size
- With the commit commit:taxeditor|d4e83e37febf32601f065390770060398ec63a80. I re-added the dependencies needed for cre...
- 01:00 AM feature request #3667 (In Progress): Implement correct implementation of original spelling in publications
- 12:56 AM feature request #3667: Implement correct implementation of original spelling in publications
- NK: ... Im genannten Fall hieße das: Abies alba Mill., ('allba'), also nach dem Literturzitat, dann ich auch eindeuti...
04/25/2017
- 11:08 PM feature request #3665: Further implementation of original spelling name caching
- RH (27-8-2013): da gibt es leider keine Empfehlungen und Konventionen. Die meisten Zeitschriften- und Monographie-Her...
- 10:53 PM feature request #3665: Further implementation of original spelling name caching
- AM: … und noch eine letzte aber wichtige Frage. Ihr habt ja nur den Fall Name und Autor dargestellt. Wichtig wäre zu ...
- 10:52 PM feature request #3665: Further implementation of original spelling name caching
- AM: … noch eine Frage: hattest du die Anführungszeichen bewusst so gewählt? Also http://www.fileformat.info/info/unic...
- 02:48 PM feature request #3665: Further implementation of original spelling name caching
- Hallo,
die Angabe der Originalschreibweise in einfachen Anführungszeichen ist nicht schön, da sie dann wie Ku... - 09:43 PM bug #6385 (Feedback): Specimen Editor should handle new search same as bulk editor
- 02:45 PM bug #6385: Specimen Editor should handle new search same as bulk editor
- You should not invoke dispose() on the part because this is a UI method which is used to free any resources like hand...
- 06:53 PM task #6591 (Closed): Use name used in source for original spelling
- See #3967 for further information
- 03:25 PM task #6590 (New): Check if CdmVaadinAuthentication is a proper solution for handling authentications and SecurityContexts
- CdmVaadinAuthentication has been implemented (#4844) to overcome the problem of parallel login into multiple vaadin U...
- 02:39 PM bug #6575 (Worksforme): Drag & Drop in features view does not work anymore
- Seems to be already solved. Also works for Katja.
Closing ticket as "Worksforme" - 02:22 PM task #6557: Import Bogota data
- Applied in changeset commit:cdmlib-apps|f7802e9485fc42ca4716224ffc524e5022effa4f.
- 02:12 PM bug #6579 (Resolved): user and usergroup menu item is missing
- 02:03 PM bug #6579 (Worksforme): user and usergroup menu item is missing
- Andreas: Please try again with the lates nightly and delete `.cdmLibrary/.metadata/.plugins/org.eclipse.e4.workbench/...
- 02:01 PM bug #6586 (Resolved): Duplicate menu items in name editor context menu
- Applied in changeset commit:taxeditor|2fdbc4e2980b34cfcc00a46604ebdf0d0e0642de.
- 01:32 PM bug #6587 (Resolved): Wrong order of "Window" menu
- Applied in changeset commit:taxeditor|c7cc7a1848ff05b381b13f6e06c40d3ef52e4f4d.
04/24/2017
- 10:59 PM bug #6436: [DISCUSS] TitleCache update strategy for related objects
- WGB:
oh je. Vielleicht noch eine zusätzliche Möglichkeit – ein „Update“ Knopf, der auf den Teil wirkt, der im Foku... - 10:46 PM feature request #6589: Handle protologue as original source with URI link
- WGB: Mir aufgefallen, dass die Angabe „Protolog“ im Editor Detail eigentlich nicht richtig ist, es geht ja eigentli...
- 10:18 PM feature request #6589 (Closed): Handle protologue as original source with URI link
- Once #6588 and #6581 is implemented we could move protologue information from NameDescription to nomenclatural refere...
- 10:45 PM feature request #6588: Add URL and URL comment to OriginalSource / ExternalLink
- AM: Frage hierzu: Reicht eine URL ohne lieber Möglichkeit, mehrere zu setzen. Beim „Protolog haben wir ja die Möglich...
- 10:34 PM feature request #6588: Add URL and URL comment to OriginalSource / ExternalLink
- WGB:
Ein Lektotype muss ja explizit designiert (publiziert!) werden – das ist dann m.A.n. die Referenz, die in der... - 07:24 PM feature request #6588 (Closed): Add URL and URL comment to OriginalSource / ExternalLink
- An original source may sometimes want to link to an external link where the reference (the page in the reference) is ...
- 10:34 PM bug #6434 (Duplicate): Add URL for TypeDesignation
- 10:33 PM feature request #6435 (Duplicate): [DISCUSS] Comment field for "Protolog"
- 07:26 PM bug #6585: Combo menu items have orange font
- Remove parent ticket as this is not an e4 issue only but existed already in e3
- 05:39 PM bug #6585 (Rejected): Combo menu items have orange font
- 
- 06:26 PM bug #6587 (Closed): Wrong order of "Window" menu
- 06:25 PM bug #6586 (Closed): Duplicate menu items in name editor context menu
- 05:37 PM bug #6584 (Closed): Remove annotation and Editor navigation from perspectives/toolbar
- 05:34 PM bug #6583 (Rejected): perspective separator not movable
- 05:32 PM bug #6582 (Closed): status bar not completely visible
- 04:36 PM feature request #6581 (Closed): Make all microreferenced references OriginalSources
- Currently we have OriginalSource usually used for collections of sources while single references such as nomenclatura...
- 09:13 AM bug #6579 (Closed): user and usergroup menu item is missing
- in admin menu the items user and usergroup are missing
04/23/2017
- 01:25 AM feature request #6576 (Resolved): Implement operation that guesses all basionyms for a syonymy
- 01:20 AM bug #6578 (Resolved): Implement name cache for hybrid formulas
- Applied in changeset commit:cdmlib|9100bd6e8e43dc39e62276b9289aacd706cfc73e.
- 01:18 AM bug #6578 (Resolved): Implement name cache for hybrid formulas
- Currently the nameCache is not filled for hybrid formulas. This is due to an error in getTaggedName which in contrary...
04/22/2017
- 09:05 PM feature request #6577 (Resolved): Make sp. nov. parsable
- 09:03 PM feature request #6577 (New): Make sp. nov. parsable
- 09:03 PM feature request #6577 (Resolved): Make sp. nov. parsable
- Applied in changeset commit:cdmlib|e7375c14bb1d62b546771cdc57cd5bde781ba55f.
- 07:22 PM feature request #6577 (Closed): Make sp. nov. parsable
- Uncertain taxon names sometimes look like "Iresine sp. nov. 1". This should be parsable.
Other examples are "Gomphi... - 07:04 PM task #6557: Import Bogota data
- Homonyme and similar:
~~~ sql
SELECT tnb.titleCache, tnb.nameCache
FROM TaxonNameBase tnb INNER JOIN
(SELECT ... - 06:45 PM task #6557: Import Bogota data
- Name.titleCache duplicates:
~~~ sql
SELECT titleCache, count(*) as n
FROM TaxonNameBase
GROUP BY titleCache
Ha... - 03:40 PM task #6557 (Resolved): Import Bogota data
- Applied in changeset commit:cdmlib|4cd473206ecc56a523020c28166c0750afc1484f.
- 12:09 AM task #6557 (In Progress): Import Bogota data
- 03:33 PM feature request #6576 (In Progress): Implement operation that guesses all basionyms for a syonymy
- 03:32 PM feature request #6576 (Closed): Implement operation that guesses all basionyms for a syonymy
- In different contexts basionym relationships are not given but could be retrieved from the given name informations su...
04/21/2017
- 04:40 PM bug #6575 (Worksforme): Drag & Drop in features view does not work anymore
- For example when you drag a description element from one taxon description to another one of the same taxon
~~~
l... - 04:33 PM bug #6558 (Closed): Some menu items are missing
- 04:30 PM bug #6558: Some menu items are missing
- @Katja: Can this be closed?
- 04:29 PM feature request #6574 (New): Error Log view not available in Eclipse 4
- As we do not completely upgrade to eclipse4 we could use the e3-e4 bridge and reenable the error log view.
pp_uebe... - 08:01 AM feature request #6573 (Closed): Option to define a wms overlay layer for the openlayers map viewer
- The wms overlay layer will be the top most layer in the viewer.
* Reuse the "Custom WMS base Layer" fieldset.
I...
04/20/2017
- 02:24 PM feature request #6572 (Closed): Adapt/Add Wiki pages for e4 development
- 12:56 PM task #6571 (New): catch errors in openlayers and display a user friendly error message
- Errors which should be cached:
* Map Server absent
* Server error when receiving tiles (HTTP status >= 400)
--... - 11:20 AM bug #6570 (Resolved): rank list should be sorted
- Applied in changeset commit:taxeditor|5039be8cb876e8be10ca29a7f80fadbb7869d224.
- 11:09 AM bug #6570 (Closed): rank list should be sorted
- The list of ranks for creation of a new name in bulk editor should be sorted.
Hallo,
nice-to-have: Die Auswahllis...
04/19/2017
- 12:02 PM bug #6558 (Resolved): Some menu items are missing
- View should work and the run menu was removed with commit:taxeditor|392d2a8dec4b3cb878fcd3f1d680476b541b0e34.
To t... - 09:55 AM bug #6558: Some menu items are missing
- The whole open View part is not available anymore.
And in the main menu there is a new item "Run" - 10:57 AM feature request #6569 (Closed): Remove unused application model from taxeditor.application
- Somehow this is needed to correctly initalize the model fragments (specifically the one of the workbench plugin) in t...
- 07:20 AM feature request #6568 (Closed): Migrate perspectives
04/18/2017
- 06:11 PM feature request #6567 (New): Make name relationship types editable in term editor
- New terms should always be added to a user defined vocabulary. Make sure that this vocabulary is also considered when...
04/11/2017
- 03:25 PM feature request #6566 (Closed): Migrate main menu
- 03:24 PM feature request #6565 (Closed): [MASTER] Eclipse 4 Migration
- master ticket for keeping track of the migration process. Bugs are handled in #6545
- 03:04 PM feature request #6564 (New): full support for ISO 8601 date time format
- The taxeditor only supports the dd.mm.yyyy date formats. For better acceptance in the international community it is c...
- 02:59 PM feature request #3742 (Closed): Display altitude, distance to Ground and watersurface correctly in dataportal
- Remaining issues copied to #6563
So we can close this issue here.
- 02:56 PM bug #6563 (Closed): Display altitude, distance to Ground and watersurface correct handling of freetext
- There are 2 open issues:
* ~~null values should not be shown as 0, but should be considered as being empty. If all... - 01:55 PM bug #6562 (Closed): vaadin mvp framwork presenters without view
- Spring beans of presenter implementations which are based on the `eu.etaxonomy.vaadin.mvp.AbstractPresenter<V extends...
04/10/2017
- 02:27 PM feature request #6561 (New): TimePeriodParser support for ISO 8601 date formats
- The should support ISO 8601 date formats:
* YYYY
* YYYY-MM
* YYYY-MM-DD - 11:31 AM feature request #6560 (New): Add SpecimenOrObservationType "live sample"
- Actually live sample are handled as OtherSpecimen, but with GBOL and AlgaTerra we will get this more frequently, so w...
04/07/2017
- 03:15 PM feature request #6559 (Closed): Order misapplied names in name editor
- Mail from Walter:
"Hallo,
wir haben eben 4 misapplied names eingegeben. Die Zeile für den neuen Namen wurde dab...
04/06/2017
- 03:52 PM feature request #5752 (In Progress): Reduce TaxEditor size
- 01:00 PM bug #3866 (In Progress): Link Taxon Editor name to the taxon in the taxon navigator
- the problem is that the navigator starts with only the classification loaded. Maybe we need to overwrite the link met...
- 12:29 PM feature request #3533 (Resolved): Prefill nomenclatural reference information if possible
- Applied in changeset commit:taxeditor|73649f564b443d7e6ae1b849cd9b24db232fb8c2.
- 11:13 AM feature request #6536 (Rejected): extract name export of outputmodel export
- 11:12 AM bug #6558 (Closed): Some menu items are missing
- For example in the right click menu in the taxon navigator the set secundum for subtree is missing.
- 10:44 AM bug #6480 (Resolved): Re-saved by cascade in specimen bulk editor
- Applied in changeset commit:cdmlib|09a260bbd5261aa3635a12edfb0cb1d9fb76424a.
- 10:31 AM bug #6385: Specimen Editor should handle new search same as bulk editor
- @Patrick: I was working on the specimen editor, so I fixed it already. Please review.
- 10:24 AM bug #6385 (Resolved): Specimen Editor should handle new search same as bulk editor
- Applied in changeset commit:taxeditor|9f5ce1e084d9a4d3c41e774f657cd97cf79e3bbb.
04/05/2017
- 03:43 PM task #6258: Add Registration to cdm model
- Andreas Müller wrote:
> What class should Registration inherit from? CdmBase, VersionableEntity, AnnotatableEntity, ... - 12:17 AM task #6258: Add Registration to cdm model
- What class should Registration inherit from? CdmBase, VersionableEntity, AnnotatableEntity, IdentifiableEntity?
- 09:28 AM feature request #6524: Distribtion Update for Fauna Europaea
- the sql files for the creation of the excel files you can find in ticket #4328
And we exported only the taxon uuid...
04/04/2017
- 11:13 PM feature request #6524: Distribtion Update for Fauna Europaea
- @Katja: I do not find the area uuids in row 2. I thought to remember that they were to be found there. Do you have an...
- 11:08 PM feature request #6524: Distribtion Update for Fauna Europaea
- @Katja: Is there any code available defining the export format?
Also we should add an example Excel file to cdmlib-i... - 11:00 PM task #6557 (Closed): Import Bogota data
- Import checklist and later import specimen data
Open issues:
* ~~capital family names~~
* ~~deduplication~~
... - 02:51 PM bug #6556 (Rejected): After restart of the editor the previous views show errors
- The reload of the previous loaded views does not work.
Following exception is shown: No editor descriptor for id org... - 02:37 PM bug #6552 (Closed): Remove "Run" menu from editor
- Fixed with commit:taxeditor|b953b4f0c90978509f972bd65b7fa34a0d8434a1.
- 02:30 PM feature request #6536: extract name export of outputmodel export
- do we really need an extra ticket for this or can we close it as rejected or duplicate?
- 02:29 PM feature request #6314: CDM light (csv) export implemented
- ~~WGB: Eine allgemeine Sache noch: Beim Import/Verlinkung in Access wird ein die Zeile abschließendes Semikolon in de...
- 02:28 PM feature request #6314: CDM light (csv) export implemented
- WGB:
zu Tropicos Format. Ich wüsste nicht, dass das irgendwo dokumentiert ist. Mir fällt dazu ein:
Für jeden Einz... - 11:57 AM bug #6480 (In Progress): Re-saved by cascade in specimen bulk editor
- 11:57 AM bug #6480: Re-saved by cascade in specimen bulk editor
- I don't get an exception, but I have to close the Specimen Editor to see the result.
- 11:42 AM bug #6489 (Resolved): Selection dialogs should not show the already selected elements for Synonym and TaxonNode operations
- Applied in changeset commit:taxeditor|2dbc30eaaedd811da55371f5bc173d6ada3c8485.
when the actual object is set in t... - 11:01 AM bug #6383: fatal error on git push: The remote end hung up unexpectedly
- Today I observed something interesting. I pushed some changes to edit-community and it took quite some time ... after...
- 10:59 AM bug #6553 (Closed): eclipse 4 problem while creating controls for name editor
- This is a follow up exception of #6550
Can be closed with fixing #6550 - 10:43 AM bug #6555 (Rejected): open specimen search wizard does not work
- was only a problem in my workspace
- 09:16 AM bug #6555 (Rejected): open specimen search wizard does not work
- clicking on specimen search in import wizard shows only the selected wizard could not be started.
- 10:43 AM bug #6549 (Closed): ClassCastException when adding a new synonym in name editor
- 10:42 AM bug #6550 (Closed): ArrayIndexOutOfBoundsException when opening a taxon with double click from the navigator
- 10:42 AM bug #6550: ArrayIndexOutOfBoundsException when opening a taxon with double click from the navigator
- The fix is avoids the exception but does not really remove the cause of the problem. But since we are anyway migratin...
- 10:31 AM bug #6550 (Resolved): ArrayIndexOutOfBoundsException when opening a taxon with double click from the navigator
- Applied in changeset commit:taxeditor|6252f4f075fdd0b0fd271ede49e82f5904ee83dd.
04/03/2017
- 05:40 PM feature request #5030: Implement new dto object for TaxonNavigator
- This is a general issue not only related to Remoting
- 04:07 PM feature request #6554 (In Progress): The details views are newly created with every change of the focus
- With every focus change the details view is created completely new. this leads to performance problems.
===
We... - 02:03 PM bug #6553 (Closed): eclipse 4 problem while creating controls for name editor
- ~~~ text
2017-04-03 13:59:28,913 ERROR [java.lang.Class] - There is an error in the implementation. There should hav... - 01:40 PM bug #6550: ArrayIndexOutOfBoundsException when opening a taxon with double click from the navigator
- on windows I also get the ArrayIndexOutOfBoundsException with the right click menu:
~~~
java.lang.ArrayIndexOutOf... - 12:34 PM bug #6550 (Closed): ArrayIndexOutOfBoundsException when opening a taxon with double click from the navigator
- Opening a taxon via right-click menu works fine.
~~~
!ENTRY org.eclipse.e4.ui.workbench 4 0 2017-04-03 12:32:15.5... - 12:42 PM bug #6552 (Closed): Remove "Run" menu from editor
- 12:39 PM bug #6551 (Worksforme): Invalid parts
- The following messages occur during startup
~~~
!MESSAGE Removing part descriptor with the 'eu.etaxonomy.taxedi... - 12:24 PM bug #6549 (Resolved): ClassCastException when adding a new synonym in name editor
- Applied in changeset commit:taxeditor|98b22c11b756de3b32e723e1d888d2f2dbe5df5e.
- 12:23 PM bug #6549 (Closed): ClassCastException when adding a new synonym in name editor
- 12:07 PM bug #6548 (Closed): NPE in DeduplicationHelper
- NPE in DeduplicationHelper.merge(). Probably this comes when an object referenced by its uuid is already deleted. The...
- 10:56 AM feature request #6314: CDM light (csv) export implemented
- missing or not working:
- ~~protologue uri~~
- ~~nomenclatural status~~
- ~~die Reference_ID der Nomenklatur...
03/31/2017
- 10:11 AM bug #5211: Error when creating new taxon /problem with sortindex in taxon tree
- I tried to move the sortIndex updater to hibernate saveOrUpdate listener in hope that the list is update at that poin...
03/30/2017
- 04:57 PM bug #6546 (In Progress): Adding identifier does not always work
- 11:47 AM bug #6546 (In Progress): Adding identifier does not always work
- Probably this is related to the size() problem in PersistentLists (see #5211): If a PersistentList is detached (not b...
- 02:49 PM feature request #6547 (Closed): Implement excluded and unplaced in taxon navigator
- They should both be put to the end (first unplaced then excluded) (maybe this exists already) and should be visualize...
03/29/2017
- 04:19 PM bug #5211 (In Progress): Error when creating new taxon /problem with sortindex in taxon tree
- 04:10 PM bug #5211: Error when creating new taxon /problem with sortindex in taxon tree
- The main problem here is that the hibernate implementation of List (PersistentList) has a strange behavior in the siz...
- 03:22 PM bug #5211 (New): Error when creating new taxon /problem with sortindex in taxon tree
- we have to reopen this ticket.
Henning created a new taxon, which had the sortindex -1.
Hallo, beim Überarbeite... - 04:12 PM bug #6545 (Closed): [MASTER] Eclipse 4 bugs
- Master ticket for bugs that occured after the switch to Eclipse 4
Most bugs should be fixed by removing the usage ... - 12:08 PM bug #6424: Empty name creates problem/NPE in name editor
- Can you please leave a message if you have changed the message mentioned in comment #10 somehow?
- 10:52 AM bug #6424 (Closed): Empty name creates problem/NPE in name editor
- 11:10 AM bug #6544 (New): Bulkeditor for Rights
- Now Rights are reusable, to have the possibility to deduplicate and edit them we need a bulk editor for rights.
- 11:08 AM bug #6262 (Closed): Implement Rights reusable in TaxEditor
- 10:49 AM feature request #6308 (Resolved): Add configuration dialog for the deletion of synonyms in name editor
- Applied in changeset commit:taxeditor|7b179f568172320789260f76997e1c3c688845f5.
03/28/2017
- 10:53 AM feature request #4452: p2 update problem with nebula compositetable dependency
- With the change to eclipse neon we have to check if the update still works because I have also used the latest releas...
- 10:52 AM feature request #6314: CDM light (csv) export implemented
- added the infraspecific and infrageneric rank abbreviation > Revision 11d3f2a9
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