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From 03/13/2017 to 04/11/2017

04/11/2017

06:34 PM Revision dddcbc33 (taxeditor): ref #6566 Migrate org.eclipse.ui.main.menu.window menu
Patrick Plitzner
04:49 PM Revision d8e3f5f5 (taxeditor): ref #6566 Migrate org.eclipse.ui.main.menu.edit menu
Patrick Plitzner
03:40 PM Revision 5559c1b5 (taxeditor): ref #6566 Migrate org.eclipse.ui.main.menu.file menu
- Also migrate two help handlers Patrick Plitzner
03:25 PM feature request #6566 (Closed): Migrate main menu
Patrick Plitzner
03:24 PM feature request #6565 (Closed): [MASTER] Eclipse 4 Migration
master ticket for keeping track of the migration process. Bugs are handled in #6545 Patrick Plitzner
03:04 PM feature request #6564 (New): full support for ISO 8601 date time format
The taxeditor only supports the dd.mm.yyyy date formats. For better acceptance in the international community it is c... Andreas Kohlbecker
02:59 PM feature request #3742 (Closed): Display altitude, distance to Ground and watersurface correctly i...
Remaining issues copied to #6563
So we can close this issue here.
Andreas Kohlbecker
02:56 PM bug #6563 (Closed): Display altitude, distance to Ground and watersurface correct handling of fr...
There are 2 open issues:
* ~~null values should not be shown as 0, but should be considered as being empty. If all...
Andreas Kohlbecker
01:59 PM Revision e192ea4b (cdm-vaadin): #6562 throwing warning on issue
Andreas Kohlbecker
01:58 PM Revision 5722cf70 (cdm-vaadin): #6169 fixing type references in SpEl
Andreas Kohlbecker
01:57 PM Revision fccf3401 (cdm-vaadin): #6169 TimePeriod typo in text field hint
Andreas Kohlbecker
01:55 PM bug #6562 (Closed): vaadin mvp framwork presenters without view
Spring beans of presenter implementations which are based on the `eu.etaxonomy.vaadin.mvp.AbstractPresenter<V extends... Andreas Kohlbecker
09:41 AM Revision 74f4344f (cdm-vaadin): #6169 TimePeriod field layout improvements
Andreas Kohlbecker

04/10/2017

05:03 PM Revision 5367d5aa (cdm-vaadin): ref #6169 TimePeriod field with simple and details view
Andreas Kohlbecker
04:08 PM Revision 6cc0be7e (cdm-vaadin): ref #6169 JodaTimePartialConverter support for multiple formats
Andreas Kohlbecker
02:27 PM feature request #6561 (New): TimePeriodParser support for ISO 8601 date formats
The should support ISO 8601 date formats:
* YYYY
* YYYY-MM
* YYYY-MM-DD
Andreas Kohlbecker
02:19 PM Revision 2921c66d (cdm-vaadin): #6169 custom TimePeriod field with working parser field
Andreas Kohlbecker
11:31 AM feature request #6560 (New): Add SpecimenOrObservationType "live sample"
Actually live sample are handled as OtherSpecimen, but with GBOL and AlgaTerra we will get this more frequently, so w... Katja Luther
09:42 AM Revision 9c553d89 (cdm-vaadin): ref #6169 impoved TimePeriod custom field
Andreas Kohlbecker
09:40 AM Revision b7f0c1cd (cdm-vaadin): eclipse launcher with forceSchemaUpdate
Andreas Kohlbecker
09:39 AM Revision 1ea64dbb (cdm-vaadin): removing addon tuning-datefield
Andreas Kohlbecker

04/07/2017

05:51 PM Revision da12936b (cdmlib): ref #5752 Adapt implementations to new wrapper for lucene exceptions
Patrick Plitzner
04:20 PM Revision 5fac592f (cdmlib): ref #6524 first version, but still missing getStatusByStatusStr imple...
Andreas Müller
04:20 PM Revision 32da7249 (cdmlib): cleanup
Andreas Müller
03:39 PM Revision 3ca8a283 (cdmlib): ref #5752 wrap lucene exception for name and occurrence service
Patrick Plitzner
03:18 PM Revision 9035b51e (taxeditor): ref #5752 Remove jars from lib folder
Patrick Plitzner
03:15 PM feature request #6559 (Closed): Order misapplied names in name editor
Mail from Walter:
"Hallo,
wir haben eben 4 misapplied names eingegeben. Die Zeile für den neuen Namen wurde dab...
Patrick Plitzner
01:47 PM Revision 353af88b (taxeditor): ref #5752 Fix dependencies for integration tests
Patrick Plitzner
12:41 PM Revision d4547dee (cdmlib): ref #5752 wrap specific exception to avoid dependency on lucene library
Patrick Plitzner
09:33 AM Revision f140f6e5 (cdm-vaadin): ref #6169 removing usued bean reference
Andreas Kohlbecker
08:14 AM Revision 2260591f (cdm-vaadin): ref #6169 ReferenceEditor with custom component for TimePeriods
Andreas Kohlbecker

04/06/2017

01:46 AM Revision 889bde96 (taxeditor): ref #5752 revert last 3 "cleanup dependencies in taxeditor.cdmlib"
Patrick Plitzner
11:13 PM Revision 2fb0c44a (cdmlib-apps): new GrantedAuthority factory method for E+M activator
Andreas Müller
11:09 PM Revision 143b5542 (cdmlib-apps): cleanup
Andreas Müller
10:42 PM Revision 9e78ad4b (cdmlib-apps): ref #6265 remove second feature tree
Andreas Müller
10:42 PM Revision c47fe910 (cdmlib-apps): cleanup
Andreas Müller
10:41 PM Revision 8c9ce46d (cdmlib-apps): ref #6265 fix user-person cascade
Andreas Müller
08:06 PM Revision ad2424dc (cdmlib): cleanup
Andreas Müller
08:06 PM Revision 2c86f1fe (cdmlib): ref #6524 create import class for FauEu distribution import
Andreas Müller
08:06 PM Revision 1e3e61e8 (cdmlib): cleanup
Andreas Müller
07:58 PM Revision a8a448fc (taxeditor): cleanup
unknown
07:50 PM Revision 11724b00 (taxeditor): ref #5752 cleanup dependencies in taxeditor.cdmlib Part 4
Patrick Plitzner
07:44 PM Revision 78204354 (taxeditor): ref #5752 cleanup dependencies in taxeditor.cdmlib Part 3
Patrick Plitzner
07:36 PM Revision 3fe30969 (taxeditor): ref #5752 cleanup dependencies in taxeditor.cdmlib Part 2
Patrick Plitzner
07:04 PM Revision 5fbf2e5f (taxeditor): ref #5752 cleanup dependencies in taxeditor.cdmlib
Patrick Plitzner
06:38 PM Revision a4254f30 (taxeditor): ref #6539 Remove unnecessary dependencies from platform feature
Patrick Plitzner
03:52 PM feature request #5752 (In Progress): Clean up Editor dependencies
Patrick Plitzner
03:22 PM Revision 8857ff70 (taxeditor): fix compiliation error in grantedAuthorityWizard
Katja Luther
02:43 PM Revision 11ff0df4 (taxeditor): minor
Katja Luther
02:37 PM Revision e391c51f (cdmlib): minor
Andreas Müller
02:37 PM Revision 2ac4df70 (cdmlib): ref #6258 add Registration to hibernate mapping and make in Annotatab...
Andreas Müller
02:37 PM Revision d43fabd5 (cdmlib): ref #6529 first implementation of WorkingSet taxon filter
unknown
02:37 PM Revision 09c24be2 (cdmlib): ref #6258 first imcomplete version of Registration class
Andreas Müller
02:37 PM Revision 25adb569 (cdmlib): prepare cdm 4.7
Andreas Müller
02:36 PM Revision 93f14f52 (cdmlib): cleanup
Andreas Müller
02:27 PM Revision 2afb4373 (cdmlib-apps): ref #6265 add usergroup to Salvador import and remove empty pers...
Andreas Müller
02:26 PM Revision 5e13e4c4 (cdmlib-apps): cleanup
Andreas Müller
02:24 PM Revision 52ea8a19 (cdmlib): minor and cleanup
Andreas Müller
01:26 PM Revision 29d21df0 (cdmlib): adapt GrantedAuthorityImpl factory method
Andreas Müller
01:00 PM bug #3866 (In Progress): Link Taxon Editor name to the taxon in the taxon navigator
the problem is that the navigator starts with only the classification loaded. Maybe we need to overwrite the link met... Katja Luther
12:57 PM Revision 3af84b28 (taxeditor): revert minor changes that lead to compilation errors
Katja Luther
12:43 PM Revision dc3f8070 (cdm-vaadin): fix for missing ListSelect Valo styles
Andreas Kohlbecker
12:30 PM Revision 091fb45b (cdmlib-apps): ref #6265, ref #6362 Adapt SalvadorActivator to new name structu...
Andreas Müller
12:29 PM feature request #3533 (Resolved): Prefill nomenclatural reference information if possible
Applied in changeset commit:taxeditor|73649f564b443d7e6ae1b849cd9b24db232fb8c2. Katja Luther
12:26 PM Revision 73649f56 (taxeditor): fix #3533: prefill nomenclatural reference selection dialog with n...
Katja Luther
12:25 PM Revision 97e3b5a9 (cdmlib-apps): cleanup
Andreas Müller
11:50 AM Revision 9f957e7b (cdmlib-apps): ref #5499 improve Edaphobase synonym import
Andreas Müller
11:50 AM Revision 1835e26d (cdmlib-apps): cleanup
Andreas Müller
11:50 AM Revision 6877954d (cdmlib-apps): add E+M pub2 to BM sources
Andreas Müller
11:13 AM feature request #6536 (Rejected): extract name export of outputmodel export
Katja Luther
11:12 AM bug #6558 (Closed): Some menu items are missing
For example in the right click menu in the taxon navigator the set secundum for subtree is missing. Katja Luther
10:56 AM Revision d2924473 (taxeditor): avoid NPE in derivate label provider
Katja Luther
10:53 AM Revision f4fa11df (taxeditor): adapt taxeditor for specimen imports of algae and obeservations
Katja Luther
10:52 AM Revision d33c0bce (cdmlib): adapt ABCD and GBIF imports to requirements of algae specimen and obe...
Katja Luther
10:47 AM Revision cb9b1284 (cdmlib): ref #6314: adapt outputmodel export for protected titlecaches and add...
Katja Luther
10:45 AM Revision 65508125 (cdm-vaadin): PopupEditor with GridLayout support
Andreas Kohlbecker
10:44 AM Revision b0ed3c5b (cdm-vaadin): removing obsoltete UI class
Andreas Kohlbecker
10:44 AM bug #6480 (Resolved): Re-saved by cascade in specimen bulk editor
Applied in changeset commit:cdmlib|09a260bbd5261aa3635a12edfb0cb1d9fb76424a. Katja Luther
10:43 AM Revision 09a260bb (cdmlib): fix #6480: fix some problems in delete of specimen
Katja Luther
10:31 AM bug #6385: Specimen Editor should handle new search same as bulk editor
@Patrick: I was working on the specimen editor, so I fixed it already. Please review. Katja Luther
10:24 AM bug #6385 (Resolved): Specimen Editor should handle new search same as bulk editor
Applied in changeset commit:taxeditor|9f5ce1e084d9a4d3c41e774f657cd97cf79e3bbb. Katja Luther
10:23 AM Revision 9f5ce1e0 (taxeditor): fix #6385: new search, new session for specimen editor
Katja Luther
10:23 AM Revision 99586693 (taxeditor): minor
Katja Luther
10:23 AM Revision f0cff051 (taxeditor): ref #4993: adapt deleteDerivateHandler and Operation
Katja Luther
09:03 AM Revision 2f292fcd (cdm-vaadin): reorganizing package structure - minor
Andreas Kohlbecker
08:43 AM Revision 0e7a9b4f (cdm-vaadin): better popup views and editors fully compliant to MVP
Andreas Kohlbecker

04/05/2017

03:43 PM task #6258: Add Registration to cdm model
Andreas Müller wrote:
> What class should Registration inherit from? CdmBase, VersionableEntity, AnnotatableEntity, ...
Andreas Kohlbecker
09:28 AM feature request #6524: Distribtion Update for Fauna Europaea
the sql files for the creation of the excel files you can find in ticket #4328
And we exported only the taxon uuid...
Katja Luther

04/04/2017

12:17 AM task #6258: Add Registration to cdm model
What class should Registration inherit from? CdmBase, VersionableEntity, AnnotatableEntity, IdentifiableEntity? Andreas Müller
11:37 PM Revision 660765d1 (cdmlib): ref #6524 create import class for FauEu distribution import
Andreas Müller
11:37 PM Revision 87c876ce (cdmlib): cleanup
Andreas Müller
11:13 PM feature request #6524: Distribtion Update for Fauna Europaea
@Katja: I do not find the area uuids in row 2. I thought to remember that they were to be found there. Do you have an... Andreas Müller
11:08 PM feature request #6524: Distribtion Update for Fauna Europaea
@Katja: Is there any code available defining the export format?
Also we should add an example Excel file to cdmlib-i...
Andreas Müller
11:00 PM task #6557 (Closed): Import Bogota data
Import checklist and later import specimen data
Open issues:

* ~~capital family names~~
* ~~deduplication~~
...
Andreas Müller
10:50 PM Revision 26c35e3a (cdmlib): ref #6546 avoid add() with index if not necessary
Andreas Müller
10:48 PM Revision 87ebfb12 (cdmlib): cleanup
Andreas Müller
10:29 PM Revision 0a5fd8c5 (cdmlib): minor
Andreas Müller
10:29 PM Revision 702cfaf1 (cdmlib-apps): ref #6286 FloraHellenica image import class added
Andreas Müller
10:28 PM Revision 99e92829 (cdmlib-apps): ref #6286 FloraHellenica import transactional
Andreas Müller
04:50 PM Revision 6d715f66 (cdm-vaadin): moving vaadin data converter to sub package
Andreas Kohlbecker
04:48 PM Revision f3bb4cae (cdm-vaadin): ref #6169 very basic Reference editor experiment
Andreas Kohlbecker
02:51 PM bug #6556 (Rejected): After restart of the editor the previous views show errors
The reload of the previous loaded views does not work.
Following exception is shown: No editor descriptor for id org...
Katja Luther
02:37 PM bug #6552 (Closed): Remove "Run" menu from editor
Fixed with commit:taxeditor|b953b4f0c90978509f972bd65b7fa34a0d8434a1. Patrick Plitzner
02:34 PM Revision b953b4f0 (taxeditor): ref #6539 Streamline dependencies
Patrick Plitzner
02:30 PM feature request #6536: extract name export of outputmodel export
do we really need an extra ticket for this or can we close it as rejected or duplicate? Andreas Müller
02:29 PM feature request #6314: CDM light (csv) export implemented
~~WGB: Eine allgemeine Sache noch: Beim Import/Verlinkung in Access wird ein die Zeile abschließendes Semikolon in de... Andreas Müller
02:28 PM feature request #6314: CDM light (csv) export implemented
WGB:
zu Tropicos Format. Ich wüsste nicht, dass das irgendwo dokumentiert ist. Mir fällt dazu ein:
Für jeden Einz...
Andreas Müller
02:02 PM Revision 29078af6 (cdm-vaadin): refactoring package structure
- presenters moved into view
- per cdm domain subpackage
- component presenters moved into component package
Andreas Kohlbecker
01:17 PM Revision 7750fc1e (cdmlib): ref #6529 Extend working set with area, taxon node and rank filter
Patrick Plitzner
12:53 PM Revision 97fa6ae5 (taxeditor): Remove inherited redundant class members
Patrick Plitzner
12:22 PM Revision 1d2e0764 (cdm-vaadin): ref #6169 cleanup
Andreas Kohlbecker
12:22 PM Revision 8af30566 (cdm-vaadin): ref #6169 fixing invalid type in SpEl
Andreas Kohlbecker
11:57 AM bug #6480 (In Progress): Re-saved by cascade in specimen bulk editor
Katja Luther
11:57 AM bug #6480: Re-saved by cascade in specimen bulk editor
I don't get an exception, but I have to close the Specimen Editor to see the result. Katja Luther
11:42 AM bug #6489 (Resolved): Selection dialogs should not show the already selected elements for Synonym...
Applied in changeset commit:taxeditor|2dbc30eaaedd811da55371f5bc173d6ada3c8485.
when the actual object is set in t...
Katja Luther
11:42 AM Revision 2dbc30ea (taxeditor): fix #6489: add the actually selected object as parameter to the se...
Katja Luther
11:01 AM bug #6383: fatal error on git push: The remote end hung up unexpectedly
Today I observed something interesting. I pushed some changes to edit-community and it took quite some time ... after... Andreas Kohlbecker
10:59 AM bug #6553 (Closed): eclipse 4 problem while creating controls for name editor
This is a follow up exception of #6550
Can be closed with fixing #6550
Patrick Plitzner
10:44 AM Revision c7627153 (cdm-vaadin): ref #6169 message count indicator, edit reference button and impo...
Andreas Kohlbecker
10:43 AM bug #6555 (Rejected): open specimen search wizard does not work
was only a problem in my workspace Katja Luther
09:16 AM bug #6555 (Rejected): open specimen search wizard does not work
clicking on specimen search in import wizard shows only the selected wizard could not be started. Katja Luther
10:43 AM bug #6549 (Closed): ClassCastException when adding a new synonym in name editor
Patrick Plitzner
10:42 AM bug #6550 (Closed): ArrayIndexOutOfBoundsException when opening a taxon with double click from th...
Patrick Plitzner
10:42 AM bug #6550: ArrayIndexOutOfBoundsException when opening a taxon with double click from the navigator
The fix is avoids the exception but does not really remove the cause of the problem. But since we are anyway migratin... Patrick Plitzner
10:31 AM bug #6550 (Resolved): ArrayIndexOutOfBoundsException when opening a taxon with double click from ...
Applied in changeset commit:taxeditor|6252f4f075fdd0b0fd271ede49e82f5904ee83dd. Patrick Plitzner
10:37 AM Revision fb8c579e (taxeditor): ref #6539 Remove unnecessary dependencies from platform feature
Patrick Plitzner
10:31 AM Revision 6252f4f0 (taxeditor): fix #6550 Discard page change event if no current page is present
Patrick Plitzner

04/03/2017

05:40 PM feature request #5030: Implement new dto object for TaxonNavigator
This is a general issue not only related to Remoting Andreas Müller
04:07 PM feature request #6554 (In Progress): The details views are newly created with every change of the...
With every focus change the details view is created completely new. this leads to performance problems.
===
We...
Katja Luther
03:37 PM Revision 7a044d6b (cdm-vaadin): ref #6169 reusing RegistrationItem for WorkflowView
Andreas Kohlbecker
02:03 PM bug #6553 (Closed): eclipse 4 problem while creating controls for name editor
~~~ text
2017-04-03 13:59:28,913 ERROR [java.lang.Class] - There is an error in the implementation. There should hav...
Katja Luther
01:40 PM bug #6550: ArrayIndexOutOfBoundsException when opening a taxon with double click from the navigator
on windows I also get the ArrayIndexOutOfBoundsException with the right click menu:
~~~
java.lang.ArrayIndexOutOf...
Katja Luther
12:34 PM bug #6550 (Closed): ArrayIndexOutOfBoundsException when opening a taxon with double click from th...
Opening a taxon via right-click menu works fine.
~~~
!ENTRY org.eclipse.e4.ui.workbench 4 0 2017-04-03 12:32:15.5...
Patrick Plitzner
12:42 PM bug #6552 (Closed): Remove "Run" menu from editor
Patrick Plitzner
12:39 PM bug #6551 (Worksforme): Invalid parts
The following messages occur during startup
~~~
!MESSAGE Removing part descriptor with the 'eu.etaxonomy.taxedi...
Patrick Plitzner
12:24 PM bug #6549 (Resolved): ClassCastException when adding a new synonym in name editor
Applied in changeset commit:taxeditor|98b22c11b756de3b32e723e1d888d2f2dbe5df5e. Patrick Plitzner
12:23 PM bug #6549 (Closed): ClassCastException when adding a new synonym in name editor
Patrick Plitzner
12:24 PM Revision 98b22c11 (taxeditor): fix #6549 Fix ClassCastException
Patrick Plitzner
12:07 PM bug #6548 (New): NPE in DeduplicationHelper
NPE in DeduplicationHelper.merge(). Probably this comes when an object referenced by its uuid is already deleted. The... Katja Luther
11:31 AM Revision a1169a72 (taxeditor): ref #6539 Remove unused dependencies from target platform and feature
Patrick Plitzner
11:04 AM Revision b99cbf31 (cdm-vaadin): ref #6169 Overview on Names and Types in RegistrationWorkingSets
Andreas Kohlbecker
10:56 AM feature request #6314: CDM light (csv) export implemented
missing or not working:
- ~~protologue uri~~
- ~~nomenclatural status~~
- ~~die Reference_ID der Nomenklatur...
Katja Luther
09:44 AM Revision d4bf18c9 (cdmlib): ref #6314: add factual data export to outputmodel export
Katja Luther

03/31/2017

10:11 AM bug #5211: Error when creating new taxon /problem with sortindex in taxon tree
I tried to move the sortIndex updater to hibernate saveOrUpdate listener in hope that the list is update at that poin... Andreas Müller

03/30/2017

04:57 PM bug #6546 (In Progress): Adding identifier does not always work
Andreas Müller
11:47 AM bug #6546 (In Progress): Adding identifier does not always work
Probably this is related to the size() problem in PersistentLists (see #5211): If a PersistentList is detached (not b... Andreas Müller
04:10 PM Revision b1cb2b7e (cdmlib-apps): minor
Andreas Müller
04:07 PM Revision 3386a523 (cdmlib-apps): ref #6286 add order relevant
unknown
02:49 PM feature request #6547 (Closed): Implement excluded and unplaced in taxon navigator
They should both be put to the end (first unplaced then excluded) (maybe this exists already) and should be visualize... Andreas Müller
02:31 PM Revision 0da88583 (taxeditor): ref #6539 Remove linuxtools from target platform
Patrick Plitzner

03/29/2017

05:20 PM Revision 58313611 (cdmlib-apps): ref #6286 latest changes to FloraHellenica import
unknown
05:02 PM Revision 776d80b2 (cdmlib): add featureTreeTitle and uuidFeatureTree to import configurator base
unknown
05:02 PM Revision c2bd24dc (cdmlib): cleanup
unknown
04:19 PM bug #5211 (In Progress): Error when creating new taxon /problem with sortindex in taxon tree
Andreas Müller
04:10 PM bug #5211: Error when creating new taxon /problem with sortindex in taxon tree
The main problem here is that the hibernate implementation of List (PersistentList) has a strange behavior in the siz... Andreas Müller
03:22 PM bug #5211 (New): Error when creating new taxon /problem with sortindex in taxon tree
we have to reopen this ticket.
Henning created a new taxon, which had the sortindex -1.
Hallo, beim Überarbeite...
Katja Luther
04:12 PM bug #6545 (Closed): [MASTER] Eclipse 4 bugs
Master ticket for bugs that occured after the switch to Eclipse 4
Most bugs should be fixed by removing the usage ...
Patrick Plitzner
03:54 PM Revision bfb1fb3e (cdmlib): code cleaning
Katja Luther
03:49 PM Revision 2da896e1 (cdmlib): ref #6519: missed to adapt the other exports
Katja Luther
02:54 PM Revision 3f56624d (taxeditor): ref #6539 define feature.platform by features instead of plugins
- used mostly features in feature.xml Patrick Plitzner
02:50 PM Revision e4a12d23 (cdmlib): ref #6519: minor
Katja Luther
02:33 PM Revision 6e8bb9fc (cdmlib): fix csvDemoExport
Katja Luther
01:00 PM Revision 1866bcf7 (taxeditor): fix failing test
Katja Luther
12:45 PM Revision 5de4f660 (cdmlib): ref #6519: adapt csv demo exports to the new exportResult and exportR...
Katja Luther
12:40 PM Revision 478a3f10 (taxeditor): ref #6539 Re-enable macosx build
Patrick Plitzner
12:08 PM bug #6424: Empty name creates problem/NPE in name editor
Can you please leave a message if you have changed the message mentioned in comment #10 somehow? Andreas Müller
10:52 AM bug #6424 (Closed): Empty name creates problem/NPE in name editor
Katja Luther
11:55 AM Revision 664d0a00 (cdm-vaadin): ref #6169 visualization of RegistrationWorkingSets in the workflo...
Andreas Kohlbecker
11:30 AM Revision 2856f9d1 (taxeditor): ref #6539 Move to Eclipse 4 compatibility layer
- adapt rcp.target and feature.platform
- updated repositories in pom.xml
- fixed some incompatibility compile errors
Patrick Plitzner
11:10 AM bug #6544 (New): Bulkeditor for Rights
Now Rights are reusable, to have the possibility to deduplicate and edit them we need a bulk editor for rights. Katja Luther
11:08 AM bug #6262 (Closed): Implement Rights reusable in TaxEditor
Katja Luther
10:51 AM Revision 191fe468 (cdmlib): ref #6314: add classification in taxon table, smaller fixes
Katja Luther
10:49 AM feature request #6308 (Resolved): Add configuration dialog for the deletion of synonyms in name e...
Applied in changeset commit:taxeditor|7b179f568172320789260f76997e1c3c688845f5. Katja Luther
10:48 AM Revision 7b179f56 (taxeditor): fix #6308: fix correct deletion handling of synonyms and misapplic...
Katja Luther

03/28/2017

02:39 PM Revision 38ac74da (cdmlib): ref #6314: add nomenclatural author table
Katja Luther
10:53 AM feature request #4452: p2 update problem with nebula compositetable dependency
With the change to eclipse neon we have to check if the update still works because I have also used the latest releas... Patrick Plitzner
10:52 AM feature request #6314: CDM light (csv) export implemented
added the infraspecific and infrageneric rank abbreviation > Revision 11d3f2a9 Katja Luther
10:51 AM Revision 11d3f2a9 (cdmlib): ref #6314: smaller changes
Katja Luther

03/27/2017

04:43 PM Revision c975a066 (taxeditor): Fix compile error - Remove generics from AbcdImportConfigurator
Patrick Plitzner
04:26 PM Revision 77bc4e69 (taxeditor): ref #6539 Fix taxeditor build (temporary)
- disable macosx build
- remove /bin folder from source generation (a zip cannot include
itself)
Patrick Plitzner
03:30 PM Revision 3228f1d9 (taxeditor): Fix taxeditor URL in parent pom
Patrick Plitzner
02:19 PM bug #6543: [DISCUSS] If a reference has only a protected titleCache nothing is shown in the name ...
If a reference has no abbrevTitleCache, the titleCache should be shown in the nomenclatural reference section of the ... Katja Luther
02:15 PM bug #6543 (New): [DISCUSS] If a reference has only a protected titleCache nothing is shown in the...
Katja Luther
02:16 PM bug #6449 (Closed): Nomenclatural references with protected titleCache are not shown correctly in...
There is still the problem, that with an empty abbrevTitleCache nothing is shown in the name editor. This is an edito... Katja Luther
02:09 PM bug #4390 (Closed): Titlecache of field unit does not update when changing field unit data via de...
Katja Luther
01:57 PM bug #6088 (Resolved): New reproducable multiple representations exception for name relationships
Applied in changeset commit:taxeditor|1b127be6e5ec70fdcadce991f0a9fd154953e1fe. Katja Luther
01:55 PM Revision 1b127be6 (taxeditor): fix #6088: remove the session from the nameRelationSection fixes ...
Katja Luther
12:47 PM Revision 3aa5197e (cdmlib-apps): cleanup
unknown
12:47 PM Revision cd7dec0f (cdmlib-apps): fix #6542 NepenthesIdentifierActivator added
unknown
12:45 PM feature request #6525 (Duplicate): WFO Name Identifier import
This is a duplicate for #6542 Andreas Müller
12:43 PM feature request #6542: Import identifier for Nepenthaceae names
we still should adapt the import to use the new ImportResult (#6541) structure Andreas Müller
12:38 PM feature request #6542 (Resolved): Import identifier for Nepenthaceae names
Applied in changeset commit:cdmlib|0e62dfd8bbd48842e06fba0475349701289f225a. Anonymous
12:31 PM feature request #6542 (Resolved): Import identifier for Nepenthaceae names
Andreas Müller
12:38 PM Revision 8d2716e1 (cdmlib): add saveOrUpdate to ICommonService
unknown
12:37 PM Revision 8780ba55 (cdmlib): cleanup
unknown
12:37 PM Revision b4cec96a (cdmlib): fix #6531 add wfo identifier uuid to DefinedTerm class
unknown
12:36 PM Revision 0e62dfd8 (cdmlib): fix #6542 name identifier import
unknown
12:28 PM Revision 045fb441 (cdm-dataportal): fixing missing html support in descriptions of image gallery ...
Andreas Kohlbecker
11:51 AM Revision 6c1ac83d (taxeditor): fix problem of reference wizard when changing reference type
Katja Luther
11:35 AM Revision 0e7cb43d (cdm-dataportal): Powered by EDIT block enabled by default
Andreas Kohlbecker
10:39 AM task #6537: Import Edaphobase descriptive data
SL:
So findest du alle Beobachtungen, die es zum Taxon gibt. Du suchst aber nur die, die das Taxon beschreiben und...
Andreas Müller

03/25/2017

10:40 AM Revision 1de2da8c (cdmlib-apps): ref #6541 adapt appImport to new ImportResult structure
unknown
10:40 AM Revision b9fdd7f4 (cdmlib-apps): cleanup
unknown
02:21 AM Revision 5aece4cd (cdmlib): ref #6541 fix failing imports with check
unknown
01:46 AM Revision cd8ba318 (cdmlib): cleanup
unknown

03/24/2017

10:38 PM Revision e09b25d9 (cdmlib-apps): add an activator for outputmodel export
Katja Luther
08:41 PM Revision c3699734 (cdmlib): ref #6541 first version of ImportResult implemented
unknown
08:35 PM Revision ef934f44 (cdmlib): ref #6541 first version of ImportResult implemented
unknown
08:27 PM Revision 0befeb80 (cdmlib): Cleanup
unknown
06:17 PM Revision ad4315e4 (cdmlib): cleanup
unknown
04:38 PM Revision 0b50b058 (cdmlib): cleanup
unknown
04:33 PM feature request #6541 (Resolved): Implement ImportResult
Andreas Müller
04:05 PM Revision c62f0e82 (cdmlib): cleanup
unknown
03:21 PM Revision 2d981b4e (cdm-vaadin): ref #6169 RegistrationWorkingSets more complete, validation probl...
Andreas Kohlbecker
10:25 AM bug #6540 (Closed): After changing type of reference the dialog is empty
mail von Walter:
Hallo,
im Detail-View die Referenz aufgerufen – Typ von Artikel auf Book geändert; Resultat: Lee...
Katja Luther
08:15 AM Revision b5d35767 (taxeditor): ref #6539 Set tycho version to 1.0.0
Patrick Plitzner

03/23/2017

07:45 PM Revision 414662b3 (taxeditor): ref #6539 Fix build problems
- set Bundle-RequiredExecutionEnvironment back to Java 1.8
- Remove indigo osgi dependency from target platform
Patrick Plitzner
05:52 PM Revision 4e4e473c (taxeditor): ref #6539 remove Bundle-RequiredExecutionEnvironment
Patrick Plitzner
05:51 PM bug #6539 (Closed): Build problems for taxeditor post 4.6 release
There were and still are several problems with the building the taxeditor. Some of them have to do with the switch to... Patrick Plitzner
04:53 PM Revision 191308d3 (cdm-vaadin): ref #6169 initial RegistrationWorkingSet implementation
Andreas Kohlbecker
04:53 PM Revision 2dfe7e2b (cdm-vaadin): ignoring ide files
Andreas Kohlbecker
04:49 PM Revision 210b9aa6 (cdm-vaadin): better WorkflowView title, validation, some EventListeners
Andreas Kohlbecker
03:20 PM Revision f1bfff2c (taxeditor): Merge branch 'develop' into workingSet
Patrick Plitzner
03:17 PM Revision 632f684a (taxeditor): Upgrade jdt.core.prefs to Java 1.8
Patrick Plitzner
03:08 PM Revision 438cfd39 (taxeditor): ref #6538 Add character select and character matrix perspective
Patrick Plitzner
03:07 PM feature request #6538 (Closed): Add perspectives for working character data/matrix
Add two new perspectives

1. for creating the working set and the feature tree
1. for filling out the matrix
Patrick Plitzner
03:05 PM Revision d732d4b1 (taxeditor): Remove inherited redundant class members
Patrick Plitzner
12:57 PM task #6537 (New): Import Edaphobase descriptive data
data is available in observation.observation
~~~ sql
SELECT
obs.*, descr.*
FROM
observation.observatio...
Andreas Müller
11:57 AM Revision d28454f9 (taxeditor): minor
Katja Luther
11:04 AM Revision 8e48a465 (taxeditor): Increase RequiredExecutionEnvironment to JavaSE-1.8 for test, rele...
Andreas Kohlbecker
10:53 AM feature request #6536 (Rejected): extract name export of outputmodel export
The scientific name export of the output model export is large, so we should extract it to is own class. Katja Luther
10:47 AM Revision f3e1e1fa (taxeditor): ref #6314: adaption to changes in exports
Katja Luther
10:34 AM Revision 03ebde9e (cdmlib): ref #6314: smaller fixes, creation of tropicos full name string, crea...
Katja Luther
10:30 AM Revision 5ab2308b (taxeditor): adding EditRepository as pluginRepository to solve dependency prob...
Andreas Kohlbecker
10:20 AM Revision 24dbe552 (taxeditor): adding EditRepository as pluginRepository to solve dependency prob...
Andreas Kohlbecker

03/22/2017

12:51 AM task #6535 (Closed): MetaDataPropertyName from number to string in DB
MetaDataPropertyName is stored as number in CdmMetaData. We use string for TermType at other places and should do so ... Andreas Müller
12:22 AM feature request #6534 (New): Make extended details parsable
Kannst Du Dir gelegentlich mal den Eintrag für
Nepenthes flava Wistuba, Nerz & A.Fleischm., Blumea 52(1): 159 (-1...
Andreas Müller
10:25 PM bug #6533 (Closed): New taxon wizard does not refresh is excluded and excluded note information
When editing a taxon node and setting it to excluded and adding an excluded note + saving + afters calling "New taxon... Andreas Müller
10:04 PM feature request #6532: Make "&" in reference title parsable
Das & ist kein ganz leichter Fall, weil man eben aufpassen muss, es nicht mit dem & im Autorenteam zu verwechseln.
A...
Andreas Müller
10:03 PM feature request #6532 (New): Make "&" in reference title parsable
E.g. Nepenthes merrilliana Macfarl. in Trans. & Proc. Bot. Soc. Pennsylvania 2. 1911 Andreas Müller
09:59 PM bug #6530: After editing a nomenclatural reference of a new created name some information is lost
WBG:
ich habe einen merkwürdigen Bug gefunden, den es (glaube ich) früher nicht gab. Tritt jetzt zum 2. Mal auf, ...
Andreas Müller
09:49 AM bug #6530 (Closed): After editing a nomenclatural reference of a new created name some informatio...
Creating a new name and edit the nomenclatural reference before the name is saved does not work.
if the nomenclatura...
Katja Luther
08:25 PM task #6512: document eu.etaxonomy.cdm.model.common.IIdentifiableEntity.generateTitle()
Documentation added.
> For References I only get a citation string using generateTitle() not with getTitleCache()
...
Andreas Müller
08:15 PM task #6512 (Resolved): document eu.etaxonomy.cdm.model.common.IIdentifiableEntity.generateTitle()
Applied in changeset commit:cdmlib|9ff954bd55f6217c9f235c6c632a9175cdea9263. Anonymous
08:15 PM Revision 9ff954bd (cdmlib): fix #6512 documentation added to generateTitle and getTitleCache
unknown
08:07 PM Revision cbc9161b (cdmlib): cleanup
unknown
07:14 PM feature request #6531 (Resolved): Add WFO Name Identifier to Identifier Types
Andreas Müller
06:56 PM feature request #6531 (In Progress): Add WFO Name Identifier to Identifier Types
Andreas Müller
06:55 PM feature request #6531 (Closed): Add WFO Name Identifier to Identifier Types
048e0cf9-f59c-42dd-bfeb-3a5cba0191c7 from Nepenthes Andreas Müller
07:04 PM Revision 26d5d7db (cdmlib): cleanup
unknown
06:57 PM Revision 07591709 (cdmlib): ref #6531 Add WFO IdentifierType
unknown
11:02 AM Revision 45cabe7d (taxeditor): Increase RequiredExecutionEnvironment to JavaSE-1.8 for all plugins
Patrick Plitzner
10:43 AM Revision 139cabe9 (taxeditor): Increase Bundle-RequiredExecutionEnvironment to JavaSE-1.8
Patrick Plitzner
10:03 AM Revision f0925f74 (taxeditor): need to manage the itextpdf dependency in the parent pom.xml
Andreas Kohlbecker

03/21/2017

06:50 PM feature request #6529 (In Progress): Extend WorkingSet to allow a more fine grained definiton of ...
Andreas Müller
03:56 PM feature request #6529 (Closed): Extend WorkingSet to allow a more fine grained definiton of taxon...
In our last meeting we decided to extend the WorkingSet class (see http://wiki.bgbm.org/additivity/index.php/Additivi... Patrick Plitzner
05:22 PM Revision c21c9bf6 (cdm-vaadin): ref #6169 removing replaced RegistrationItemDesign
Andreas Kohlbecker
05:20 PM Revision 5b4537c4 (cdm-vaadin): ref #6169 replacing declarative WorkflowViewDesign
Andreas Kohlbecker
03:25 PM Revision eaee371d (cdm-vaadin): ref #6169 renaming phycobank in packages to registration
Andreas Kohlbecker
03:16 PM Revision ce3b8933 (cdm-vaadin): ref #6169 layout improvelemts and openButton clickable
Andreas Kohlbecker
03:11 PM Revision 990b3a01 (taxeditor): Fix translation
Patrick Plitzner
03:09 PM bug #6528 (New): Exception when deleting media in media view which is also used in a MediaSpecimen
1. Open bulk editor for media
1. Create a new media
1. Save
1. Open specimen editor
1. Create a new field unit
1...
Patrick Plitzner
02:56 PM Revision c04bb9c5 (taxeditor): Increase java code level to 1.8
Patrick Plitzner
02:54 PM Revision 7bd84a66 (taxeditor): ref #6527 Refactor configurator composite
Patrick Plitzner
02:53 PM feature request #6527 (Closed): Refactor delete configurator for media
Hallo Katja, Patrick,

ich habe gerade aus dem Media View für Taxa versucht Bilder zu löschen.

Funktio...
Patrick Plitzner
02:50 PM Revision 1227f7ac (taxeditor): Fix typo
Patrick Plitzner
02:33 PM Revision 38053dd0 (taxeditor): ref #4611 Refactor string constants
Patrick Plitzner
02:05 PM Revision eb567e6e (taxeditor): ref #4611 l10n for DeleteConfiguration in taxeditor.store plugin
Patrick Plitzner
01:39 PM Revision 8aa8877b (taxeditor): minor adaption to java 1.8
Katja Luther
10:44 AM Revision 8f6b3c3a (cdm-vaadin): ref #6169 allowing to toggle item list and grid
Andreas Kohlbecker
09:59 AM feature request #4639: Show quantitative data correctly in Data portal (for Cyprus portal)
Hallo Ralf,

danke für die Kontrolle.

> Bei den Strandarten, wo Min. und Max. 0 m sind, wird aber offenbar nu...
Andreas Kohlbecker
09:59 AM feature request #4639 (Closed): Show quantitative data correctly in Data portal (for Cyprus portal)
Hallo Andreas,
aus Zypern-Sicht dürfte alles umgesetzt sein. Was ich auf die Schnelle nicht überprüfen kann, sind ...
Andreas Kohlbecker
08:53 AM Revision 01a31d8a (taxeditor): managing itextpdf dependency
Andreas Kohlbecker

03/20/2017

04:20 PM bug #6526 (Closed): Show types in correct order
Correct order starts with Holotype –> Lectotype –> Iso(lecto)type and ends with the rest Patrick Plitzner
04:17 PM Revision 78803337 (cdmlib): fix NPE in CsvNameExport
Katja Luther
04:15 PM Revision b3babf1b (cdmlib): ref #6314: add homotypicalgroupNameComparator
Katja Luther
04:06 PM Revision 08f24060 (cdm-vaadin): ref #6169 abstract page view having header and sub-header
Andreas Kohlbecker
04:01 PM Revision f318c828 (cdmlib): ref #6314: handle homotypical group and further implementation for fi...
Katja Luther
02:47 PM feature request #6314: CDM light (csv) export implemented
Formatting of Types is also discussed at #461 Andreas Müller
02:24 PM feature request #6525 (In Progress): WFO Name Identifier import
Andreas Müller
02:24 PM feature request #6525 (Duplicate): WFO Name Identifier import
... from a csv/Excel list of name ids/uuids and WFO Name Identifers. Andreas Müller
01:53 PM Revision 5711e069 (cdmlib): initialize export data holder when initialize exportDataWrapper
Katja Luther
01:27 PM feature request #6524 (Closed): Distribtion Update for Fauna Europaea
Import the adapted distributions from a file formatted like the attached file
Open issues:
* ~~add sources~~ c...
Katja Luther
12:29 PM Revision 3f5a354e (taxeditor): adapt tests
Katja Luther
12:12 PM Revision 4b501287 (cdm-vaadin): ref #6169 UI preformance improvement for RegistrationItems
- using GridLayout
- disabling lazy loading
Andreas Kohlbecker
12:01 PM Revision 4c32cdde (taxeditor): adapt tests
Katja Luther
11:55 AM Revision 5212a01c (taxeditor): minor
Katja Luther
11:50 AM Revision 395d11a1 (taxeditor): minot
Katja Luther
11:40 AM Revision e6fcf4e8 (taxeditor): adapt editor to the changes in exportResult
Katja Luther
08:30 AM Revision 46a02272 (cdm-dataportal): changing block title from 'Funded by EDIT' to 'CDM - Powered...
Andreas Kohlbecker

03/19/2017

10:33 PM Revision a774af50 (cdmlib): minor
unknown
10:32 PM Revision ced26c39 (cdmlib): #6286 add Lifeform to default features
unknown
10:29 PM Revision e041d745 (cdmlib-apps): cleanup
unknown
10:28 PM Revision f40a1396 (cdmlib-apps): ref #6286 FloraHellenica import continued
unknown

03/17/2017

03:30 PM Revision 9f9727cb (cdm-vaadin): ref #6169 lazy loading of RegistrationItem in the ListView
Andreas Kohlbecker
01:47 PM Revision 6f9eb1fe (cdm-vaadin): ref #6169 using RegistrationItem in the ListView
Andreas Kohlbecker
01:46 PM Revision c5e81a37 (taxeditor): ref #4611 german i18n for taxeditor.navigator plugin
Patrick Plitzner
12:59 PM Revision c5e92bc3 (cdmlib): ref #6519: implementing wrapper for export data
Katja Luther
12:58 PM Revision d688ff5c (cdmlib): ref #6314: start implementing handleName in outputmodel export
Katja Luther
12:56 PM Revision f1badf83 (cdmlib): ref #6519:add a wrapper for the result data
Katja Luther
09:21 AM bug #6523 (In Progress): Correct display of misspellings in synonymy
See #6523#note-26 for possible solutions that need to be discussed
Note: this is not about origial spellings (they...
Andreas Kohlbecker
08:42 AM task #6522: package cdm-server in docker container
Yesterday I found this potentially useful article on running jvm applications in docker containers: [DZone - Java Ins... Andreas Kohlbecker
08:37 AM task #6522: package cdm-server in docker container
[Saskia Gennrich]
Ob der CDM im Docker-Container als Daemon läuft oder nicht sollte ja egal sein. Man kann den Doc...
Andreas Kohlbecker
08:35 AM task #6522: package cdm-server in docker container

jsvc macht unter Docker ziemliche Probleme, an dieser Stelle sind wir auch schon stecken geblieben als wir mal auf...
Andreas Kohlbecker
08:34 AM task #6522: package cdm-server in docker container
[Saskia Gennrich]
Wir versuchen hier am Museum Teile unserer Infrastruktur mit Docker zu realisieren.
Mit jsvc ...
Andreas Kohlbecker
08:32 AM task #6522 (Closed): package cdm-server in docker container
for easier distribution of the cdm-server it would be advantageous to package the cdm-server into a docker container.... Andreas Kohlbecker
01:17 AM feature request #5974 (Closed): Remove synonym relationships
This can be closed as we are using it for longer time already. Only open issue might be that imports need to be adapt... Andreas Müller
01:16 AM task #6521 (New): Check existing imports for handling new synonym structure correctly
Copied from #5974
E+M import and data handled in #7319
Andreas Müller

03/16/2017

12:42 AM bug #6064 (In Progress): Edaphobase problems with webservices
Andreas Müller
12:41 AM feature request #4594: RL Webservice 7: Return taxa by Identifier
Yes it works now. Tested with http://api.cybertaxonomy.org/rl_standardliste/taxon/findByIdentifier.json?identifier=60... Andreas Müller
12:33 AM bug #6122: add titleCache service
Seems to work now. I tested with http://api.cybertaxonomy.org/cichorieae/taxon/e64a9ec7-94c8-49ee-92ba-18f2065a960a/t... Andreas Müller
12:19 AM bug #6199 (Closed): Excluded note for excluded taxon nodes in TaxEdtior
A couple of layout and workflow issues for the node wizard are now handled in #6520. So we can close this ticket. Andreas Müller
12:18 AM bug #6520 (New): Improve taxon node wizard
Current wizard has several issues:
* ~~don't call it wizard, it is only 1 form, call it dialogue, form or what ev...
Andreas Müller
08:56 PM Revision 79de4982 (cdmlib-apps): ref #6519 adapt app-import to ExportResult
Andreas Müller
08:53 PM Revision 29419bb9 (cdmlib): ref #6314: implement deduplication for OutputModel
Andreas Müller
08:53 PM Revision c762f336 (cdmlib): ref #6314: add some parameters to OutputModel table
Andreas Müller
06:45 PM Revision b5651f76 (taxeditor): #6241 disabling doclint in javadoc-plugin
Andreas Kohlbecker
06:42 PM Revision ef0d6020 (cdm-vaadin): ref #6169 design for better list items
Andreas Kohlbecker
05:47 PM task #6258: Add Registration to cdm model
Nach abschließender Diskussion mit Henning ist klar geworden, dass der Fall mehrerer User eigentlich irrelevant ist. ... Andreas Kohlbecker
04:00 PM task #6258: Add Registration to cdm model
Aus technischer und organisatorischer Sicht ist der Submitter vor allem wichtig um die Registrierungen die zu einem U... Andreas Kohlbecker
04:00 PM task #6258: Add Registration to cdm model
Rein inhaltlich:

1. Ist es wichtig zu unterscheiden, zwischen Registrierungen von neuen Namen ...
Andreas Kohlbecker
03:59 PM task #6258: Add Registration to cdm model
Ja, das wäre ein bisschen aufwendiger. Aber sicherlich lösbar. Ein bisschen schwieriger ist der Fall bei Institutione... Andreas Kohlbecker
05:01 PM Revision 13bd503e (cdmlib): ref #6314: some more changes for the Output Model
Andreas Müller
02:20 PM Revision b41ebb00 (cdmlib): ref #6519: first implementation of exportresult
Katja Luther
02:16 PM Revision dbcb39fb (cdmlib): ref #6314: further implementation
Katja Luther
02:14 PM feature request #6519 (In Progress): Implement ExportResult
Katja Luther
02:13 PM feature request #6519 (Resolved): Implement ExportResult
currently exports return only boolean implement it with export result
merging of export results
Katja Luther
01:12 PM Revision dd189293 (cdm-vaadin): ref #6169 support for working sets in the service mock and DTO
Andreas Kohlbecker
01:06 PM Revision b33dd5d9 (taxeditor): maven-site-plugin to use umask instead of chmod
Andreas Kohlbecker
12:21 PM Revision fcab85d0 (taxeditor): adding default serverId and url for maven-wagon-plugin
Andreas Kohlbecker
08:47 AM bug #6459 (Closed): Implement deduplication for IntextReferences
no open issues without a ticket, so we can close the ticket Katja Luther

03/15/2017

10:27 PM Revision 9539d5a9 (cdmlib-apps): ref #6510 adapte rank label activator
Andreas Müller
10:19 PM Revision afcf48cb (cdmlib): fix typo and order in "Name not yet published"
Andreas Müller
08:11 PM feature request #6065 (Closed): Edaphobase DTO for getTaxonById
Andreas Müller
08:10 PM feature request #6065: Edaphobase DTO for getTaxonById
Open error handling issue moved to #6518 Andreas Müller
08:06 PM bug #6071 (Closed): Handle Taxonomische Großgruppen correctly in Edaphobase
Andreas Müller
08:00 PM feature request #6134 (Closed): Allow grouping by Taxonomische Großgruppe
Andreas Müller
07:52 PM feature request #6128 (Closed): Include authorship in taxon search web service
Moved remaining issue to open minor issues: #6518 Andreas Müller
07:34 PM task #6517 (Resolved): Stable IDs in Edaphobase at least for example taxa
still needs to be tested Andreas Müller
06:25 PM task #6517 (Resolved): Stable IDs in Edaphobase at least for example taxa
Open issue:

* make all IDs stable via mapping file #6518
* test
Andreas Müller
07:30 PM Revision a7424be1 (cdmlib-apps): ref #6517: make edaphobase taxon IDs stable for example data
Andreas Müller
06:59 PM task #6518 (New): Remaining minor issues for edaphobase webservices
To be able to close main tickets this is a container for remaining tasks not crucial for making the webservices work.... Andreas Müller
06:44 PM bug #6236 (Closed): Add alphabetic length ordering in name search
Andreas Müller
06:23 PM feature request #6509 (In Progress): Implement Representation csv import
Andreas Müller
11:27 AM feature request #6509 (Resolved): Implement Representation csv import
open issue
* add language into file
* make callable from Editor
Andreas Müller
06:22 PM task #6510: Import Rank labels in German and Latin
Open issues:
* some translations are still missing
* some ranks are still missing
* add to general import
Andreas Müller
11:30 AM task #6510 (In Progress): Import Rank labels in German and Latin
Open issues:
* some translations are still missing
* some ranks are still missing
* add to general import
Andreas Müller
05:36 PM Revision 28b766c5 (cdmlib): ref #6509 add language to representations import
Andreas Müller
05:34 PM Revision f336e43c (cdmlib): ref #6510 add first version of Latin rank labels and update German la...
Andreas Müller
05:22 PM Revision 85869da5 (cdmlib): ref #6314 Add OutputModelTables
Andreas Müller
04:51 PM feature request #6516 (In Progress): Add instance name and instance ID to CDM meta data
Andreas Müller
04:46 PM feature request #6515 (Closed): Add Tropicos and IPNI Name Identifer
Andreas Müller
04:45 PM feature request #6515 (Resolved): Add Tropicos and IPNI Name Identifer
Applied in changeset commit:cdmlib|74b2d2bdadc79592a0c0b689499fcc7c47bd353f. Andreas Müller
04:39 PM feature request #6515 (Closed): Add Tropicos and IPNI Name Identifer
Andreas Müller
04:45 PM Revision 74b2d2bd (cdmlib): fix #6515 Add IPNI name identifier
Andreas Müller
04:43 PM Revision acaf5a1c (cdmlib-apps): ref #6515 move tropicos identifier link from mexico import to cd...
Andreas Müller
04:18 PM bug #6459: Implement deduplication for IntextReferences
Katja Luther wrote:
> there are not all cases covered by the tests, especially the usecase of deleting the intextRef...
Andreas Müller
12:18 PM bug #6459 (Feedback): Implement deduplication for IntextReferences
there are not all cases covered by the tests, espacially the usecase of deleting the intextReferenceTarget.
the rest...
Katja Luther
04:16 PM bug #6511: Handling of objects being referenced in a InTextReference during deleting
As Nepenthes has intext references we should try to implement this soon. Andreas Müller
12:21 PM bug #6511 (Rejected): Handling of objects being referenced in a InTextReference during deleting
When deleting an object which is used as an intextReference target we have to skip deleting otherwise we get an Excep... Katja Luther
04:04 PM feature request #6514 (Duplicate): [Master] Implement IntextReferences
Andreas Müller
03:58 PM feature request #6514 (Duplicate): [Master] Implement IntextReferences
Andreas Müller
03:35 PM Revision 855da599 (cdmlib): cleanup
Andreas Müller
03:35 PM Revision 697a6de8 (cdmlib): ref #6509 first version of RepresentationCsvImport
Andreas Müller
03:35 PM Revision 17e00658 (cdmlib): ref #6509 add a SimpleImport class which is less complex to handle fo...
Andreas Müller
03:35 PM Revision fc7c4818 (cdmlib): cleanup
Andreas Müller
03:34 PM Revision 4ab4eabe (cdmlib): ref #6314: add deprecated method setSuccess
Katja Luther
03:24 PM Revision 32da6e33 (cdmlib): code cleaning
Katja Luther
03:24 PM Revision 2e90726e (cdmlib): ref #6314: implementation in progress, exportResult adaptions
Katja Luther
02:15 PM Revision 35e767bb (taxeditor): upading maven wagon extensions
Andreas Kohlbecker
02:15 PM Revision a2e7ef5c (taxeditor): using cybertaxonomy.eu instead of wp5.e-taxonomy.eu
Andreas Kohlbecker
02:07 PM Revision 1c9c8d8a (cdmlib): using cybertaxonomy.eu instead of wp5.e-taxonomy.eu
Andreas Kohlbecker
02:01 PM Revision 97d4f27f (cdmlib): ref #6314: add Tropicos Name Identifier Type
Katja Luther
01:46 PM Revision 76d9b4d1 (cdmlib): ref #6314: meta data adaption
Katja Luther
01:29 PM Revision 5465eca0 (cdm-vaadin): ref #6169 showing citation in list and eums items in UPPERCASE
Andreas Kohlbecker
01:20 PM Revision ff3eac53 (cdmlib): ref #6314: code cleaning for csv import/export
Katja Luther
01:06 PM task #6512 (Resolved): document eu.etaxonomy.cdm.model.common.IIdentifiableEntity.generateTitle()
The method IdentifiableEntity.generateTitle() is completely undocumented. For References I only get a citation string... Andreas Kohlbecker
12:57 PM feature request #6314 (In Progress): CDM light (csv) export implemented
Katja Luther
12:39 PM feature request #5554 (Closed): Allow parsing of lat/long with different minute/second characters
works fine now. Katja Luther
12:36 PM feature request #5983 (Closed): Better parsing of hybrid names
looks fine, can't find a missing possible hybrid formular. Katja Luther
11:53 AM Revision 5c612f00 (taxeditor): minor
Katja Luther
11:51 AM Revision 179cb21f (cdmlib-apps): ref #6365 adapt BotanicalNames in pesi test to new structure
Andreas Müller
11:49 AM Revision a2a69c81 (cdmlib-apps): ref #6419 rename CdmApplicationDefaultConfiguration in pesi
Andreas Müller
11:39 AM Revision d5182728 (cdmlib-apps): ref #6510 add Rank translation import activator
Andreas Müller
11:38 AM Revision 606365fa (cdmlib-apps): ref #6410 Nepenthacea IPNI import activator
Andreas Müller
11:37 AM Revision 8a3f391d (cdmlib): missed to add adapted interface
Katja Luther
11:36 AM Revision 176975a5 (cdmlib-apps): minor
Andreas Müller
11:29 AM Revision 4d8fa208 (cdmlib-apps): gerge branch 'master' of ssh://dev.e-taxonomy.eu/var/git/cdmlib-...
Katja Luther
11:28 AM Revision bbeda5af (cdmlib-apps): changes in pesi im and exports
Katja Luther
11:24 AM Revision 65fe78ea (taxeditor): minor for setSecundumForSubtree
Katja Luther
11:19 AM Revision 4312834c (cdmlib-apps): ref #6410 configure extension for taxon title
Andreas Müller
11:14 AM Revision 84b3a574 (cdmlib-apps): Update cdm-app poms to v4.7
Andreas Müller
10:52 AM Revision 22d2dd81 (cdmlib): use remotingProgressMonitor for setSecundumReferenceForSubtree
Katja Luther

03/14/2017

02:39 PM Revision 5069da98 (cdmlib): ref #6158 Update documentation from svn to git
Patrick Plitzner
02:28 PM bug #6507 (New): TermBase.representations still uses add not put
... we should switch to put like everywhere where we have multi-language-text. Andreas Müller
01:44 PM Revision b31886a0 (cdm-server): ref #6158 Update documentation from svn to git
- update links from trac to redmine
- update links to cybertaxonomy.eu
Patrick Plitzner
12:13 PM task #6258: Add Registration to cdm model
Andreas Müller wrote:
> Should submitted(By) really be of type "User", not of type Person, Team or Agent? Is it alwa...
Andreas Kohlbecker
12:12 PM task #6258: Add Registration to cdm model
Andreas Müller wrote:
> Can you please add information about bidirectionality.
>
> So, should a name link to it's...
Andreas Kohlbecker
08:50 AM task #6258: Add Registration to cdm model
Andreas Müller wrote:
> it is a bit against our CDM conventions. At other places we say collector and not collected ...
Andreas Kohlbecker
08:45 AM task #6258: Add Registration to cdm model
Andreas Müller wrote:
> Can you please add the Enum states required for the status?
>
> Is it ok to call the enum...
Andreas Kohlbecker
08:32 AM task #6258: Add Registration to cdm model
Andreas Kohlbecker wrote:
> A Registration without a state makes not much sense. A new Registration should have the ...
Andreas Kohlbecker
08:31 AM task #6258: Add Registration to cdm model
A Registration without a state makes not much sense. A new Registration should have the state preparation`.
The stat...
Andreas Kohlbecker
11:32 AM Revision d2fbb2f5 (cdm-server): ref #6240 ref #6241 disabling doclint in javadoc for jdk.8
Andreas Kohlbecker
10:57 AM feature request #6504 (Resolved): Bibliographic references should not start with firstname.
WGB: Wenn ich aus den Details die Liste der Referenzen aufrufe, um eine sec. Ref. einzugeben, bekomme ich eine nach V... Andreas Müller
10:43 AM Revision cc08d398 (cdmlib): remove required from TaxonNAMEBase.cultivarName JAXB definition
Andreas Müller
10:30 AM feature request #6503 (New): Make LSIDs klickable
WGB:
Für den Editing Prozess wäre es aber nützlich, wenn man den Link im Editor so clickable machen könnte, dass ...
Andreas Müller
10:06 AM Revision 8d871fb1 (cdm-vaadin): avoiding problems in Registration mock service initalization
Andreas Kohlbecker
09:37 AM bug #6241: fix java doc problems in projects
AK: Ich habe auch nachgezählt bei den '@link reference not found' Problemen handelt es sich um 151 stellen die sich a... Andreas Müller
09:36 AM Revision ada368c1 (cdmlib): remove required from TaxonBase.name JAXB definition
Andreas Müller
09:35 AM Revision 88839ba7 (cdmlib): cleanup
Andreas Müller
09:35 AM Revision f0c2dbeb (cdmlib): ref #6133 add csv file for German ranks (still incomplete)
Andreas Müller
09:34 AM Revision 575de380 (cdm-vaadin): avoiding NPE in Registration mock service
Andreas Kohlbecker
09:24 AM task #6158 (Feedback): Update EDIT documentation from svn to git
Andreas Müller wrote:
> At most places it is updated. I found some additional issues:
>
> * dataportal: link to S...
Andreas Müller
08:53 AM task #6158: Update EDIT documentation from svn to git
Andreas Müller wrote:
> Can't test yet as changes seem not to be deployed correctly yet.
The link in the descript...
Andreas Kohlbecker
09:12 AM Revision f8009036 (cdmlib): minor
Katja Luther
08:21 AM bug #6502 (Closed): LIE during request to portal/classification/{uuid}/pathFrom/{taxonNodeUUID}/t...

~~~
[integration_palmae] 2017-03-14 05:00:46,826 INFO [eu.etaxonomy.cdm.remote.controller.ClassificationPortalLi...
Andreas Kohlbecker

03/13/2017

11:26 PM task #6258: Add Registration to cdm model
Andreas Müller wrote:
> Can you please add the Enum states required for the status?
>
> Is it ok to call the enum...
Andreas Müller
11:24 PM task #6258: Add Registration to cdm model
Can you please add information about bidirectionality.
So, should a name link to it's registrations (probably yes)...
Andreas Müller
11:01 PM task #6258: Add Registration to cdm model
Should submitted(By) really be of type "User", not of type Person, Team or Agent? Is it always necessary that a submi... Andreas Müller
10:46 PM task #6258: Add Registration to cdm model
Can you please add the Enum states required for the status?
Is it ok to call the enum class RegistrationStatus?
Andreas Müller
10:26 PM task #6258: Add Registration to cdm model
it is a bit against our CDM conventions. At other places we say collector and not collected by, or combinationAuthor ... Andreas Müller
10:28 AM task #6258: Add Registration to cdm model
ist mein Favorit, Henning Wolf-Henning Kusber
10:25 AM task #6258: Add Registration to cdm model
Also *submittedBy*?
Alle einverstanden?
Andreas Kohlbecker
10:24 AM task #6258: Add Registration to cdm model
[Henning wrote]
Hallo Andreas,

ich habe grundsätzlich immer Schwierigkeiten mit solchen Substantiven.

Erst...
Andreas Kohlbecker
10:05 PM feature request #6501 (New): Improve validation rules for name types
Copied from #6363.
To improve this functionality we could add specific messages for each attribute. Also we could ...
Andreas Müller
10:04 PM feature request #6363 (Closed): Implement validation rules for all names according to their code
I tested by setting nameApprobation to not NULL for a zoological name. I could load but not save.
To improve this ...
Andreas Müller
09:55 PM task #6158: Update EDIT documentation from svn to git
Can't test yet as changes seem not to be deployed correctly yet. Andreas Müller
09:39 PM feature request #5474: TermEditor menu should be more structured
"Others" is still not translated. Is this not possible without having the terms translated?
We may have a look tog...
Andreas Müller
09:37 PM bug #5834 (Closed): Show volume etc. for generic references
Remaining issues copied to new ticket Andreas Müller
09:36 PM bug #6500 (New): Remaining issues for volume formating in generic references
This seems to be fixed for simple reference (see test "testGenericMissingVolume"). For inreferences it is unclear wha... Andreas Müller
09:26 PM bug #6375 (Closed): footnotes on sensu references must not be prefixed with 'sensu'
The example in the above comment works fine, as well as http://cichorieae.e-taxonomy.net/portal/cdm_dataportal/taxon/... Andreas Müller
06:16 PM bug #6111: invalid SQL (MySQLSyntaxErrorException) during call to CdmEntityDaoBase.list()
This seems to be fixed. I checked in TaxEditor that Lactuca perennis does not have any any associatedFieldUnits, so t... Andreas Müller
06:11 PM bug #6496 (Closed): Pages not shown in biblographic reference of articles
Andreas Müller
12:55 PM bug #6496 (Resolved): Pages not shown in biblographic reference of articles
Remaining issues in new ticket Andreas Müller
10:19 AM bug #6496 (In Progress): Pages not shown in biblographic reference of articles
Andreas Müller
10:19 AM bug #6496 (Closed): Pages not shown in biblographic reference of articles
Need to add to DefaultReferenceCacheStrategy Andreas Müller
06:00 PM bug #6497 (Closed): "Open in bulkeditor" does not show up in SearchResultView
Seems to work Andreas Müller
10:56 AM bug #6497 (Resolved): "Open in bulkeditor" does not show up in SearchResultView
Applied in changeset commit:taxeditor|86e788b5138d2566facf8ba2e4a92595bde6c2ad. Patrick Plitzner
10:54 AM bug #6497 (Closed): "Open in bulkeditor" does not show up in SearchResultView
Found in 4.6-SNAPSHOT Patrick Plitzner
05:15 PM Revision bc74cf95 (cdm-vaadin): ref #6169 generic workflows
Andreas Kohlbecker
05:15 PM Revision b0fdf0ab (cdm-vaadin): ref #6169 mock service for registrations
Andreas Kohlbecker
05:15 PM Revision bc94b935 (cdm-vaadin): ref #6169 workflowview working with Registration mock objects
Andreas Kohlbecker
05:15 PM Revision a6584bc2 (cdm-vaadin): ref #6169 compact string representations for registrations
Andreas Kohlbecker
04:36 PM Revision 99f6d804 (cdmlib): #6241 disabling doclint in javadoc-plugin
Andreas Kohlbecker
03:37 PM Revision cbd36af4 (taxeditor): catch NPE for DwCA Export
Katja Luther
03:18 PM Revision 4ed92181 (cdmlib): smaller changes in DwC-A Export
Katja Luther
02:13 PM Revision 5e50843e (cdm-server): Merge branch 'release/4.6.0' into develop
jenkins
02:13 PM Revision eb912f1d (cdm-server): jenkins merging release branch into master (strategy: theirs)
jenkins
02:12 PM Revision 4e08230f (cdm-server): updating poms for branch'release/4.6.0' with non-snapshot versions
jenkins
01:56 PM Revision 139bcc01 (cdm-dataportal): updating poms for 4.8.0-SNAPSHOT development
jenkins
01:55 PM Revision ec8b7eec (cdm-server): prevent javadoc-plugin from failing under java 8
Andreas Kohlbecker
01:28 PM Revision 9bb2e856 (cdm-webapp): Merge branch 'release/4.6.0' into develop
jenkins
01:28 PM Revision 5b383c45 (cdm-webapp): jenkins merging release branch into master (strategy: theirs)
jenkins
01:28 PM Revision 287aba6e (cdm-webapp): updating poms for branch'release/4.6.0' with non-snapshot versions
jenkins
01:28 PM Revision 7df8e1eb (cdm-webapp): jenkins bumping cdmlib.version and cdm.vaadin.version to 4.6.0
jenkins
12:55 PM bug #6499 (In Progress): Remaining issues to include pages in bibliographic reference titleCaches
Andreas Müller
12:52 PM bug #6499 (In Progress): Remaining issues to include pages in bibliographic reference titleCaches
Open issues are:
* BookSection (see FIXME in DefaultReferenceCacheStrategyTest.testBookSectionGetTitleCache
* ins...
Andreas Müller
12:54 PM bug #6383: fatal error on git push: The remote end hung up unexpectedly
This issue once again caused a release job to be marked as failed even if it was successful: http://int.e-taxonomy.e... Andreas Kohlbecker
12:33 PM Revision 970fd7dd (cdm-vaadin): Merge branch 'release/4.6.0' into develop
jenkins
12:33 PM Revision e4691866 (cdm-vaadin): jenkins merging release branch into master (strategy: theirs)
jenkins
12:32 PM Revision b7463298 (taxeditor): Merge branch 'release/4.6.0' into develop
jenkins
12:32 PM Revision 2cd2eb2b (taxeditor): Merge branch 'release/4.6.0'
jenkins
12:31 PM Revision b09f6fb8 (cdm-dataportal): Merge branch 'release/4.6.0' into develop
jenkins
12:31 PM Revision 7e272bf0 (cdm-dataportal): updating poms for branch'release/4.6.0' with non-snapshot ver...
jenkins
12:31 PM Revision 8cc4272c (cdm-vaadin): updating poms for branch'release/4.6.0' with non-snapshot versions
jenkins
12:31 PM Revision 24e1ad78 (cdm-dataportal): release-preparation: production level css
jenkins
12:31 PM Revision 35cad7d3 (cdm-vaadin): jenkins bumping cdmlib.version to 4.6.0
jenkins
12:30 PM Revision 576d2a46 (cdmlib): Updating develop poms back to pre merge state
jenkins
12:30 PM Revision b686f2f1 (cdmlib): Merge branch 'master' into develop
jenkins
12:30 PM Revision 69be8cb3 (cdmlib): updating develop poms to master versions to avoid merge conflicts
jenkins
12:30 PM Revision 2eb0f303 (cdmlib): Merge branch 'release/4.6.0'
jenkins
12:16 PM Revision 61cdc6e2 (cdmlib): updating poms for branch'release/4.6.0' with non-snapshot versions
jenkins
12:05 PM feature request #6483 (Closed): Restructure "Show view" and bulk editor menu
Patrick Plitzner
12:02 PM bug #6498 (New): Refactor dynamic bulk editor menu into a declarative one
Patrick Plitzner
11:57 AM Revision 77300224 (cdmlib): ref #6496 fix missing pages in bibliographic references (not yet fixe...
Andreas Müller
10:55 AM Revision 86e788b5 (taxeditor): fix #6497 Fix check for "Open in..." menu in search results
Patrick Plitzner
10:30 AM Revision c20c3c47 (cdmlib): fixing missing paging criteria in TypeDesignation DAO
Andreas Kohlbecker
10:22 AM Revision 98dc1f12 (taxeditor): show abbrev lable in nom status combo box and set default values f...
Katja Luther
10:17 AM Revision 25663daf (cdm-server): using jetty 9 runtime variable in launcher
Andreas Kohlbecker
10:17 AM Revision 353c4176 (cdm-server): eclipse launcher to start from war
Andreas Kohlbecker
10:11 AM Revision 3423ef36 (cdm-webapp): jetty9 eclipse launcher
Andreas Kohlbecker
10:03 AM Revision bcd0113d (cdm-webapp): jenkins bumping cdmlib.version and cdm.vaadin.version to 4.6.0-SN...
jenkins
10:03 AM Revision 2174a3cd (cdm-webapp): updating poms for 4.7.0-SNAPSHOT development
jenkins
10:03 AM Revision c919182d (cdm-webapp): jenkins bumping cdmlib.version and cdm.vaadin.version to 4.7.0-SN...
jenkins
10:02 AM Revision 63667693 (taxeditor): Updated version in pom / project files to taxeditor version : 4.7....
jenkins
10:02 AM Revision 2ac6d3e2 (taxeditor): Updated version in pom / project files to taxeditor version : 4.6....
jenkins
10:01 AM Revision c05e9a7e (cdm-server): updating poms for 4.7.0-SNAPSHOT development
jenkins
10:01 AM Revision 464ee239 (cdm-dataportal): updating poms for 4.7.0-SNAPSHOT development
jenkins
10:01 AM Revision 21df46c8 (cdm-vaadin): jenkins bumping cdmlib.version to 4.6.0-SNAPSHOT
jenkins
10:01 AM Revision abe41ff7 (cdm-vaadin): updating poms for 4.7.0-SNAPSHOT development
jenkins
10:01 AM Revision 8a7a3f3f (cdm-vaadin): jenkins bumping cdmlib.version to 4.7.0-SNAPSHOT
jenkins
09:59 AM Revision d510084b (cdmlib): updating poms for 4.7.0-SNAPSHOT development
jenkins
 

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