Activity

From 01/09/2017 to 02/07/2017

02/07/2017

05:22 PM bug #6388 (Closed): Duplicate entry exception when adding types to a taxon: works fine Patrick Plitzner
05:19 PM bug #6300 (Closed): DataIntegrityViolationException when saving a type: creating a new type specimen with only a protected title cache and saving it works fine Patrick Plitzner
05:16 PM bug #6336 (Closed): NPE when deleting recently created media: works fine Patrick Plitzner
05:12 PM bug #6372 (Closed): NPE when using ShowView - Datasource: Works fine!
Tested it with a corrupted datasources file Patrick Plitzner
04:21 PM bug #2939 (Closed): ehcache diskStore conflict?: Andreas Kohlbecker
11:48 AM bug #6311 (Rejected): Refactor IdentifiableEntity.compareTo method: Close the ticket as we moved the methods to TaxonNameBase and TaxonBase and the compareToX methods do not implement t... Katja Luther
11:30 AM feature request #922 (Feedback): Implement compareTo method in IdentifiableEntity properly: Looks fine, the only thing that should be moved, are the tests for the new methods. At the moment the methods are sti... Katja Luther
08:45 AM bug #6411 (Rejected): instructions on installing the nebula widget as missing: Yes this is solved. Andreas Kohlbecker

02/06/2017

06:36 PM bug #6411: instructions on installing the nebula widget as missing: This is solved by setting the target platform, right? Should we close this as invalid? Patrick Plitzner
03:12 PM bug #6411 (Rejected): instructions on installing the nebula widget as missing: Instructions on installing the nebula widget is missing in the taxeditor site documentation
1. go to help->
1. ad... Andreas Kohlbecker
04:58 PM task #6401 (Closed): Update working environment to jdk 1.8: Andreas Müller

02/03/2017

01:27 PM bug #6409 (Closed): Fix failing Level3 validation in ValidationTest introduced by removing TaxonNameBase subclasses: method is testLevel3ValidationWithValidName was set to @Ignore
The problem occurs in org.hibernate.validator.inter... Andreas Müller
12:36 PM feature request #3580 (Duplicate): Write permission error with temporary cdmserver echache dir: Andreas Kohlbecker
12:33 PM bug #1753 (Worksforme): error in server due to level2 cache: this is no longer a problem Andreas Kohlbecker
12:29 PM feature request #5848 (Resolved): Problem with writing ehCache folder on network drive using UNC path (net.sf.ehcache.CacheException): This issue most probably has been fixed while solving #2939
@Patrick: please review Andreas Kohlbecker
12:22 PM bug #2939 (Resolved): ehcache diskStore conflict?: Applied in changeset commit:cdmlib|1fd4a547b99301f06524ab828dc5eb4ef8af3c10. Andreas Kohlbecker
10:53 AM bug #6408 (Resolved): NPE in AbcdParseUtility: Applied in changeset commit:cdmlib|5adaf48060a375396e01bbc9eaea06c114b0403a. Patrick Plitzner
10:52 AM bug #6408 (Closed): NPE in AbcdParseUtility: ~~~
login : admin
editor version : 4.5.1
server : 160.45.63.230 (edit-WS I) / caryophyllales_demo_01
schema... Patrick Plitzner

02/02/2017

11:04 PM bug #6404: StackOverflow when compiling large java classes in Java8 (jdk1.8): @PP: if you still if the old version of the compilerArgs, could you please add them to the ticket? Andreas Müller
10:59 PM bug #6404 (Rejected): StackOverflow when compiling large java classes in Java8 (jdk1.8): We decided to NOT use the compilerArgs but rather try to fix the large class issue #6406.
Also the above compilerA... Andreas Müller
01:09 PM bug #6404 (Closed): StackOverflow when compiling large java classes in Java8 (jdk1.8): Andreas M.: Can you link the ticket for the MarkupTransformer class to this ticket? Patrick Plitzner
01:06 PM bug #6404 (Rejected): StackOverflow when compiling large java classes in Java8 (jdk1.8): After updating to Java 8 compiling via `mvn clean install` results in a StackOverflow. (compiling in Eclipse works be... Patrick Plitzner
11:03 PM bug #6407: Upgrade maven compiler plugin to latest version: Maybe a related commit:1ddde622ae10b01976cdb99fb50a469a5506ca7e Andreas Müller
10:58 PM bug #6407 (New): Upgrade maven compiler plugin to latest version: Currently this is not yet possible as it results in test errors probably related to missing aspectj support. This pro... Andreas Müller
05:16 PM bug #6405 (Closed): CdmPermissionVoter handles merged and separate CdmAuthorities the same: Andreas Kohlbecker
05:16 PM bug #6405: CdmPermissionVoter handles merged and separate CdmAuthorities the same: reverting commit:cdmlib|5cb08c3f by commit:cdmlib|bb902a4 Andreas Kohlbecker
04:55 PM bug #6405 (Resolved): CdmPermissionVoter handles merged and separate CdmAuthorities the same: Applied in changeset commit:cdmlib|3e29fc14020cbf9604f9ec4a8ae87fcadbbb3d3f. Andreas Kohlbecker
02:56 PM bug #6405 (Closed): CdmPermissionVoter handles merged and separate CdmAuthorities the same: The CdmPermissionVoter must take all CdmAuthorities into account which only differ by the property if any is defined ... Andreas Kohlbecker
04:56 PM task #6401 (Resolved): Update working environment to jdk 1.8: We still need to check for any dependencies that can be updated now. Or we leave this to the next general dependency ... Andreas Müller
04:54 PM task #6401: Update working environment to jdk 1.8: Some generics in model needed to be updated (no ticket for this). This also lead to a refactoring for DefinedTermBase... Andreas Müller
04:51 PM bug #6406 (In Progress): Refactor MarkupTransformer class which is too large: Andreas Müller
04:50 PM bug #6406 (In Progress): Refactor MarkupTransformer class which is too large: The large class creates problems when upgrading to java 1.8 (see #6401 and #6404).
As a work around we now comment... Andreas Müller
04:30 PM bug #6311 (In Progress): Refactor IdentifiableEntity.compareTo method: The 2 fixes dfc40f67 and 44e2abe8 primarily fixed #922 and not THIS ticket.
However, during this process we realiz... Andreas Müller
03:00 PM bug #6311 (Resolved): Refactor IdentifiableEntity.compareTo method: Applied in changeset commit:cdmlib|dfc40f673035647ff6af03097229edd1e7712222. Andreas Müller
01:27 PM bug #6311 (In Progress): Refactor IdentifiableEntity.compareTo method: Andreas Müller
04:21 PM feature request #922 (Resolved): Implement compareTo method in IdentifiableEntity properly: Revision showed that

* the method was never used by different classes and therefore the parameter does not need t... Andreas Müller
02:10 PM bug #6304 (Resolved): Deleting of Person used as user does not work: Applied in changeset commit:taxeditor|d1428f78d00bd439e471e03c5a13a68763818c29. Katja Luther
01:56 PM bug #6309: Creating an existing user throws exception: added a check for existence of users with the same username before saving the new user Katja Luther
01:54 PM bug #6309 (Resolved): Creating an existing user throws exception: Applied in changeset commit:taxeditor|afc2457c7a4661cd1577fd486211da032354a61c. Katja Luther
01:37 PM bug #6388 (Resolved): Duplicate entry exception when adding types to a taxon: should be solved with fixing #6300. Could not reproduce it anymore. Katja Luther
01:07 PM bug #6300: DataIntegrityViolationException when saving a type: Applied in changeset commit:taxeditor|e904eb89dc409f901b858e5936cbc08eef82f7fc. Katja Luther
01:06 PM bug #6300 (Resolved): DataIntegrityViolationException when saving a type: I removed the bindNullSession call and now it works. Please have a look, if everything else works, too. (I tested cre... Katja Luther
10:52 AM bug #5216: Changing the CRUD flags of an existing GrantedAuthority in the CdmAuthorityEditorInput causes an MySQLIntegrityConstraintViolationException: added a check for existence of all authority strings and replace the already existing ones with the ones already in d... Katja Luther
10:04 AM bug #5216 (Resolved): Changing the CRUD flags of an existing GrantedAuthority in the CdmAuthorityEditorInput causes an MySQLIntegrityConstraintViolationException: Applied in changeset commit:taxeditor|a789364c344b94462f1e277ee1855eea2615e59b. Katja Luther
08:41 AM bug #6403 (New): palmweb: Show image thumbnail tickbox no longer working: This could be due to divergence of the palmweb special code with the dataportal core code.
The purpose of the specia... Andreas Kohlbecker
08:35 AM bug #6402 (New): palmweb: remove comment module related code and disable comments: Andreas Kohlbecker
07:51 AM task #6392 (Closed): selenium tests for palmweb uses data: Andreas Kohlbecker

01/26/2017

11:50 PM task #6364 (In Progress): Merge viral names and bacterial names into TaxonNameBase: Andreas Müller
07:44 PM bug #6389 (Closed): Returning a Map in cdmlib leads to data loss: I added the following method to IService/ServiceBase. I then invoked it on the taxeditor side in different places. Th... Patrick Plitzner
05:41 PM bug #6388 (Closed): Duplicate entry exception when adding types to a taxon: Steps to reproduce:
1. Open any species
1. Add a new type designation in the details view
1. Click "browse" to c... Patrick Plitzner
04:59 PM feature request #6369 (Resolved): Create interfaces for TaxonName types: Applied in changeset commit:cdmlib|3786c4c9973a9249a6680a31501dfea67c47309d. Andreas Müller
04:21 PM feature request #6387 (Closed): [Rule] Rank rule for CultivarPlantNames: The only possible ranks for cultivars are CULTIVAR, GREX, CULTIVAR_GROUP, GRAFT_CHIMAERA or DENOMINATION_CLASS.
Se... Andreas Müller

01/25/2017

06:10 PM bug #6382 (Resolved): option to supply user credentials in the admin setting for the freetext index triggers: Applied in changeset commit:cdmlib|ac32d8ec395f8a22d3c787092f25c54a70ec0b2c. Andreas Kohlbecker
04:40 PM bug #6382 (In Progress): option to supply user credentials in the admin setting for the freetext index triggers: The modifed URLs in the trigger links do not work. It seems as if the Jquery ajax function in cdmlib-remote-webapp/sr... Andreas Kohlbecker
04:32 PM bug #6373 (Closed): LIE during request to /portal/descriptionElement/byTaxon: works! Andreas Kohlbecker
02:04 PM bug #6386 (Worksforme): wrong taxeditor develop branch version after taxeditor-HFX-*: The problem was actually introduced by a manual merge of the develop branch into the hotfix branch commit:taxeditor|c... Andreas Kohlbecker
01:05 PM bug #6386 (Worksforme): wrong taxeditor develop branch version after taxeditor-HFX-*: After running the taxeditor-HFX-* jobs the version in the develop branch is set to the release version. it should how... Andreas Kohlbecker
12:45 PM bug #6088: New reproducable multiple representations exception for name relationships: Hallo,
das Problem beim Speichern von Name Relationships ( s.u. "Multiple representations of the same entity") schei... Katja Luther
12:45 PM bug #6088: New reproducable multiple representations exception for name relationships: Hallo,
das erste der letzten Mittwoch gemeldeten Probleme habe ich nun auch in einem zweiten Fall, scheint also ni... Katja Luther
12:42 PM bug #6385: Specimen Editor should handle new search same as bulk editor: Katja, could you please add the existing similar ticket for the bulk editor as a related ticket? Andreas Müller
12:41 PM bug #6385 (Closed): Specimen Editor should handle new search same as bulk editor: For the bulk editors we realised that a new search should trigger a completely new session. Which also includes askin... Andreas Müller
10:33 AM feature request #6187: [DISCUSS] Ask W.Greuter about "type providing name": AM: In anderem Zusammenhang habe ich dich so verstanden, dass es pro homotypische Gruppe immer nur einen type providi... Andreas Müller
10:32 AM bug #6136: Implement type providing name in homotypical group: AM: In anderem Zusammenhang habe ich dich so verstanden, dass es pro homotypische Gruppe immer nur einen type providi... Andreas Müller
10:22 AM task #6384 (Closed): update BGBM logo: Ach übrigens ist mir gerade aufgefallen, dass im Footer von https://cybertaxonomy.eu/eu-bon/utis/1.2/ immer noch das ... Andreas Kohlbecker
10:19 AM bug #6383: fatal error on git push: The remote end hung up unexpectedly: After the above modification the cdm-webapp-HFX-FINISH job was running successfully. This could mean that the probelm... Andreas Kohlbecker
10:13 AM bug #6383 (In Progress): fatal error on git push: The remote end hung up unexpectedly: Andreas Kohlbecker
10:12 AM bug #6383: fatal error on git push: The remote end hung up unexpectedly: attempting to ssh into the server as `ssh git@dev.e-taxonomy.eu` raises a error message:
~~~
...
Last login: Fri... Andreas Kohlbecker
09:53 AM bug #6383 (Closed): fatal error on git push: The remote end hung up unexpectedly: This frequently breaks jobs in the release pipeline and always causes the affected job to fail. It also occurs in oth... Andreas Kohlbecker

01/24/2017

03:47 PM bug #6382 (Resolved): option to supply user credentials in the admin setting for the freetext index triggers: Applied in changeset commit:cdm-dataportal|c9b3fcf51a4ce188734069f350964233b0bd7aee. Andreas Kohlbecker
03:46 PM bug #6382 (Closed): option to supply user credentials in the admin setting for the freetext index triggers: The credentials must not be stored in the settings Andreas Kohlbecker
02:44 PM bug #6380: typedesignations missing in homotypic group: >A solution would be to use the existing >`eu.etaxonomy.cdm.persistence.dao.name.IHomotypicalGroupDao.getTypeDesignat... Andreas Müller
12:47 PM bug #6380 (Closed): typedesignations missing in homotypic group: This issue seems to occur only in special cases but point out a general problem with the way the typedesignations are... Andreas Kohlbecker
02:35 PM bug #6381 (Closed): Specimen titleCache should include barcode or catalogue number if accession number not exists: Andreas Müller
02:27 PM bug #6376 (Resolved): NPE when deduplicating agent: Applied in changeset commit:taxeditor|fa70a2efe1035f9f977cc24552dfbe07b8703ab9. Katja Luther
09:40 AM bug #6376 (Closed): NPE when deduplicating agent: Hi,
folgende Fehlermeldung kam eben beim Deduplizieren.
schöne Grüße, Nadja
~~~
login : n.korotkova
editor... Andreas Müller
12:20 PM bug #6379 (Worksforme): specimens of lectotypes not shown in portal: Cichorieae: The Name *Hypochaeris achyrophorus* has a Lectotype with a specimen: Herb. Clifford: 385, Hypochaeris 1... Andreas Kohlbecker
10:20 AM bug #6378 (New): Check if PlinianCore is relevant for us: https://github.com/tdwg/PlinianCore/wiki
Plinian Core Andreas Müller
09:55 AM task #6377 (New): Add DAFOR vocabulary for organismQuantityType: Dominant-
Abundant-Frequent-Occasional-Rare
====
For abundance you could use organismQuantity in conjunction w... Andreas Müller
09:30 AM bug #6375 (Closed): footnotes on sensu references must not be prefixed with 'sensu': Walter wrote:
http://portal.cybertaxonomy.org/flora-cuba/cdm_dataportal/taxon/c40f3ad5-e921-4d34-b8e4-f7235d3db73e... Andreas Kohlbecker
08:49 AM bug #6255 (Resolved): jenkins job cdm-webapp-HFX-FINISH fails due to merge conflict: I created a new job based on taxeditor-HFX-FINISH, the old one is preserved as *cdm-webapp-HFX-FINISH (BACKUP)* which... Andreas Kohlbecker

01/23/2017

04:37 PM bug #6374 (Closed): Uses no longer shown in palmweb portal broken: *Iriartea deltoidea*:
http://edit.dev/d7/palmae/cdm_dataportal/taxon/ce870eca-0422-4a3c-b849-0f5ca0370b1f Andreas Kohlbecker
02:15 PM bug #6373 (Resolved): LIE during request to /portal/descriptionElement/byTaxon: Applied in changeset commit:cdmlib|be36c37f254cc5d6f7b6297547714fc8121e2017. Andreas Kohlbecker
01:31 PM bug #6373 (Closed): LIE during request to /portal/descriptionElement/byTaxon: ~~~
Caused by: net.sf.json.JSONException: org.hibernate.LazyInitializationException: failed to lazily initialize a c... Andreas Kohlbecker
12:06 PM bug #6296 (Resolved): Simple search for common names returns duplicates: Applied in changeset commit:cdmlib|177a283a6184b5ca5ab3344042317f1f96db3b31. Katja Luther
10:41 AM bug #6296: Simple search for common names returns duplicates: There are at least two other problems. I extended the according service tests. You will find in the commit:cdmlib|cc9... Andreas Kohlbecker
11:43 AM bug #6372 (Closed): NPE when using ShowView - Datasource: Hallo,
bei der Suche nach der Update-Einstellung habe ich Window-ShowView-Datasource gewählt und u.a. Fehler bekomme... Andreas Müller
10:46 AM bug #6215 (Closed): NPE when opening preferences with no DB connection: looks fine Andreas Müller
10:37 AM bug #6371 (New): Data-Refresh problem when exporting consensus file: Another current problem related to this discussion in #5722 would be the following use case:
1) Open an existing s... Patrick Plitzner

01/21/2017

12:28 PM task #6370 (Rejected): Remaining issues to merge all TaxonNameBase subclasses: do all remaining tasks which are not handled by a subtask ticket yet. Andreas Müller
12:19 PM task #6362: Remove occurrence of NonViralName in code: replace with interface were possible Andreas Müller
11:53 AM task #6362 (Closed): Remove occurrence of NonViralName in code: in cdmlib, taxeditor, cdmlib-app, vaadin, ... Andreas Müller
12:16 PM feature request #6369 (Closed): Create interfaces for TaxonName types: Andreas Müller
12:15 PM feature request #6368 (Closed): Merge all TaxonNameBase classes, remove DTYPE, rename table: Andreas Müller
12:09 PM feature request #6367 (Closed): Make NomenclaturalCode an attribute ("type") of TaxonNameBase: Andreas Müller
12:06 PM task #6366 (Closed): Merge cultivar names into TaxonNameBase: by moving all functionality up, replacing all occurrences of CultivarName in code, adapting cache strategies and writ... Andreas Müller
12:02 PM bug #6365 (Closed): Merge botanical and zoological names into TaxonNameBase: by moving all functionality up, replacing all occurrences of BotanicalName and ZoologicalName in code, adapting cache... Andreas Müller
11:58 AM task #6364 (Closed): Merge viral names and bacterial names into TaxonNameBase: by moving all functionality up, replacing all occurrences of ViralName in code, adapting cache strategies and writing... Andreas Müller
11:56 AM feature request #6363 (Closed): Implement validation rules for all names according to their code: to fulfill the requirements for the parent ticket #6361.
First implement as Level1 rules. Later we may reduce this. Andreas Müller
11:51 AM task #6360 (Resolved): Move NonViralName functionality to TaxonNameBase: Andreas Müller
11:50 AM task #6360 (New): Move NonViralName functionality to TaxonNameBase: Andreas Müller
11:28 AM task #6360 (Resolved): Move NonViralName functionality to TaxonNameBase: Applied in changeset commit:cdmlib|7d8c96134bda3c11d053df2e8e5d03f32a500ee3. Andreas Müller
11:11 AM task #6360 (Closed): Move NonViralName functionality to TaxonNameBase: To prepare merging of NonViralName and TaxonNameBase Andreas Müller
11:49 AM feature request #6361 (Closed): [MASTER] Merge all TaxonName classes into 1 class: This gives more flexibility to change name types and reduces class casting overheads and exceptions. At the same time... Andreas Müller

01/20/2017

05:07 PM task #2501 (Closed): Remove redundant SDD import class: Andreas Müller
05:06 PM task #2501 (Resolved): Remove redundant SDD import class: Applied in changeset commit:cdmlib|6a12debb17f56a4b440d71f3f2ce06ad56bb8945. Andreas Müller
02:32 PM bug #6299: Error when deleting reference in bulk editor: please have a look if it works now as expected Katja Luther
02:30 PM bug #6359 (Closed): Remaining issues secundum for subtrees: Open issue(s):
* fill UpdateResult correctly => fixed, but preliminary changed due to #9627
* ~~add progress moni... Andreas Müller
02:28 PM bug #6358 (New): feature block ids must not be language dependant: The feature block ids are build using the label of the according feature type term. When terms are translated the id ... Andreas Kohlbecker
02:27 PM feature request #4246 (Closed): Allow inserting a new node at the beginning or somewhere else in the Polytomous Key tree: moved the two possiblities of add a node into one menu item Katja Luther
02:26 PM bug #6283 (Closed): Exceptions when editing polytomous key: seems to be fine Katja Luther
02:26 PM feature request #4766 (Closed): Repair Methods for the cdm instance: Katja Luther
01:31 PM feature request #4766 (Feedback): Repair Methods for the cdm instance: This works fine and is a very nice feature.
Some minor issues:
* Is there a reason why you have implemented the... Andreas Müller
02:25 PM feature request #6357 (New): Repair methods improvement: follow up issues to #4766
AM:
Is there a reason why you have implemented the CacheUpdater only for 3 classes an... Katja Luther
02:16 PM bug #6244 (Closed): Sortindex problems in complex operations like swap synonym and accepted and others: As this is lot of work to test but we did not get any complaints anymore I close without final testing. Also we do ha... Andreas Müller
02:08 PM bug #6356 (Closed): taxontree sort order as in editor: The classification browser (taxontree) should be using the same sort order as the taxon navigator in the editor.
... Andreas Kohlbecker
02:08 PM bug #6355: Improve message if server is down: This is NOT a duplicate for related tickets like #6209 but a separate issue. Andreas Müller
01:53 PM bug #6355 (Duplicate): Improve message if server is down: If the remote server is down/not started one gets a very long message (see attachement).
The message should be sim... Andreas Müller
02:07 PM feature request #5839: Improve error message when server can't be reached: Can we close this ticket? If it is a pure duplicate we should (and remove target version). Andreas Müller
02:06 PM feature request #5839: Improve error message when server can't be reached: Andreas Müller wrote:
> I don't remember how to invoke this message in the moment. But I have seen it recently and I... Andreas Müller
02:03 PM feature request #5839 (New): Improve error message when server can't be reached: Andreas Müller
02:00 PM feature request #5839 (Closed): Improve error message when server can't be reached: I don't remember how to invoke this message in the moment. But I have seen it recently and I think we can close this ... Andreas Müller
02:00 PM bug #6209 (Closed): NPE in DatasourceView: I don't remember how to invoke this message in the moment. But I have seen it recently and I think we can close this ... Andreas Müller
01:40 PM bug #6354 (Resolved): Advanced search: non phrase search with wildcard broken: Applied in changeset commit:cdmlib|d93004c1d8290a60779c3731a33ba3c46b062ec9. Andreas Kohlbecker
01:34 PM bug #6354 (Closed): Advanced search: non phrase search with wildcard broken: Example search string: `Abi*`
this is a regression introduced by #4223 Andreas Kohlbecker
01:29 PM bug #6353 (New): Create progress monitors for imports and other long running tasks: ... like CacheUpdater or sortindex updater Andreas Müller
01:02 PM bug #6296 (In Progress): Simple search for common names returns duplicates: bugs are fixed and tests are added Katja Luther
01:01 PM bug #6296 (Resolved): Simple search for common names returns duplicates: Applied in changeset commit:cdmlib|c4f7a205397788e29a5bb8a00efc87eb41322cab. Katja Luther
11:14 AM bug #6296: Simple search for common names returns duplicates: Another broken search request:
http://api.cybertaxonomy.org/flora_cuba/portal/taxon/find.json?doTaxaByCommonNames=... Andreas Kohlbecker
11:58 AM bug #6274 (Closed): add update of childrenCount cache in repair method: works fine Andreas Müller
11:47 AM feature request #6352 (Duplicate): Add Transmission Engine trigger to Admin menu: From the Admin menu we can now trigger sortindex refresh and cache update.
It would be nice to have a functionalit... Andreas Müller
11:01 AM bug #2939 (In Progress): ehcache diskStore conflict?: Andreas Kohlbecker
10:59 AM bug #2939: ehcache diskStore conflict?: latest location of the according documentation: http://www.ehcache.org/generated/2.10.3/html/ehc-all/#page/Ehcache_Do... Andreas Kohlbecker
10:51 AM feature request #4490 (Resolved): Make the label of the taxon page tabs customizable for portal admins: The menu cache is now refreshed automatically. Andreas Kohlbecker
10:47 AM task #6158 (Feedback): Update EDIT documentation from svn to git: At most places it is updated. I found some additional issues:
* dataportal: link to SourceRepository is broken
* ... Andreas Müller
10:28 AM feature request #3465 (Closed): Function to copy secundum reference of a given taxon node to all it's children: looks fine Katja Luther

01/19/2017

11:23 PM feature request #5714: In Original Source Type dropdown show Primary Taxonomic Source first: Andreas Müller wrote:
> ... Also "Other" is not in the expected order.
This is still an open issue, see descripti... Andreas Müller
11:00 PM feature request #4490 (Feedback): Make the label of the taxon page tabs customizable for portal admins: I switched it on for Campanula and Mexico Rubiaceae.
Worked for Rubiaceae after a couple of refreshs. For Campanul... Andreas Müller
06:04 PM bug #6349 (Resolved): Fix media description handling: Applied in changeset commit:cdm-dataportal|09e628ea8e2c8c2dac8e2b9d6e7d532b1974e020. Andreas Kohlbecker
04:29 PM bug #6349 (Closed): Fix media description handling: Since version 4.5 Media.description is shown in image galleries and on media pages.
Problem: a separator is missing ... Andreas Müller
05:30 PM bug #6248 (Closed): allow machine clients to access /manage/* OAuth2 protected web services: This perfectly works, the `managing-users.properties` are all edited so that they have an according user.
Andreas Kohlbecker
05:28 PM feature request #6351 (Closed): jenkins cdmserver-index-job.groovy supports http basic authentication: the [cdmserver-index-job.groovy](http://160.45.63.176/jenkins/scriptler/editScript?id=cdmserver-index-job.groovy) nee... Andreas Kohlbecker
04:55 PM bug #6259 (Closed): Media page problems with multiple media representations: Seems to be fixed. Maybe we can improve the layout one day. Andreas Müller
04:51 PM bug #6350 (New): Advanced search areas show empty brackets if idInVocabulary is not given: e.g. for Salvador areas Andreas Müller
04:49 PM bug #6260 (Closed): media page: rights stored in the cdm are not displayed: fixed Andreas Müller
04:48 PM feature request #6301 (Closed): Display of sources for images: Given that there is the follow up ticket this ticket can be closed. Andreas Müller
04:12 PM feature request #6288 (Closed): harmonize CommonName feature block elements: Andreas Kohlbecker
04:07 PM bug #2957 (Closed): running maven site:site for Taxonomic Editor fails: Andreas Kohlbecker
04:01 PM feature request #6278 (Closed): add sec reference as class attribute to all taxon markup: Andreas Kohlbecker
03:47 PM bug #4223 (Closed): Advanced search returns unexpected results: Andreas Kohlbecker
03:46 PM bug #6323 (Closed): LIE during request to name_catalogue/taxon.json: Andreas Kohlbecker
03:43 PM bug #6317 (Closed): LIE during request to portal/taxon/find.json: Andreas Kohlbecker
03:42 PM bug #6268 (Closed): descriptions missing in media service responses: Andreas Kohlbecker
03:42 PM bug #6261 (Closed): NPE while processing /portal/media/{uuid}/sources in BaseController: Andreas Kohlbecker
03:39 PM feature request #6249 (Closed): better logging strategy: Andreas Kohlbecker
03:33 PM bug #6227 (Closed): LIE during request to derivedUnitFacade/{uuid}/collectingareas: Andreas Kohlbecker
03:29 PM bug #4377 (Closed): LazyInitializationException (LIE) related to Team.teamMembers when calling portal/taxon.json: Andreas Kohlbecker
03:28 PM bug #6296 (In Progress): Simple search for common names returns duplicates: This works now in general but searching only for common names causes an exception:
http://api.cybertaxonomy.org/sa... Andreas Kohlbecker
02:16 PM bug #6186 (Worksforme): Drupal nodes are created even if Create drupal nodes is off: Andreas Müller
01:37 PM bug #6342 (Closed): Exception when searching for '?' in TaxonNodeSelectionDialog: works fine now Patrick Plitzner
10:35 AM bug #6342 (Resolved): Exception when searching for '?' in TaxonNodeSelectionDialog: Applied in changeset commit:cdmlib|3d654cd328d3f29666636bf5fec391629be47123. Katja Luther
12:57 PM bug #6347 (Closed): Improve layout for navigator sorttype selection: In the preferences for taxon navigator we have sorting as one issue.
We should try to group this with a header "So... Andreas Müller
10:44 AM feature request #6346 (New): Implement filtering and sorting for specimen table in dataportal: Patrick Plitzner
10:26 AM bug #6345 (New): Zooming with mouse wheel resets manually adjusted size of areas in AlignmentEditor: 1. Change the size of the different areas (single read, consensus, multi-read)
1. Zoom with CTRL+mouse wheel
1. Siz... Patrick Plitzner
08:46 AM feature request #6344 (New): Restrict UI for editing molecular data: After a testing session with Norbert we decided to use a very restrictive UI to avoid any synchronization problems. T... Patrick Plitzner
08:28 AM bug #4821: Changing order of terms not possible: Yes, please review. Katja Luther

01/18/2017

11:47 PM bug #6343 (In Progress): TermVocabularies of OrderedTerms must be OrderedVocabularies: Andreas Müller
11:46 PM bug #6343 (In Progress): TermVocabularies of OrderedTerms must be OrderedVocabularies: Updatescript for TermVocabularies of OrderedTerms which are not OrderedVocabularies.
See also https://dev.e-taxono... Andreas Müller
11:43 PM bug #4821: Changing order of terms not possible: Should I review or are there still open aspects? Andreas Müller
11:39 PM feature request #5474: TermEditor menu should be more structured: Please also add a separator above "Others" Andreas Müller
11:38 PM feature request #5474 (Feedback): TermEditor menu should be more structured: Please use i18n (translations for term types themselves will also be offered soon, there is a ticket). Be aware that ... Andreas Müller
11:29 PM feature request #6314: CDM light (csv) export implemented: Katja: Ich habe diese und die vorherige Version auch nochmal unter Y:\BDI\EDIT-Plattform\_Latest Versions\Output Mode... Andreas Müller
11:03 PM bug #6042: Campanula portal TODOS: Can you please adapt (or remove) target version. 4.5 does not seem to be correct. Andreas Müller
06:14 PM bug #6042 (Closed): Campanula portal TODOS: Patrick Plitzner
06:15 PM feature request #6321: Implement parallel loading + progress bar for loading objects into the bulk editor: Currently we have a warning if more than 500(?) objects are going to be loaded into an bulk editor. Instead we should... Andreas Müller
05:59 PM feature request #5714: In Original Source Type dropdown show Primary Taxonomic Source first: Andreas Müller wrote:
> Have you checked if we can reuse / combine the Comparator developed for #3185?
The other co... Patrick Plitzner
04:23 PM bug #6283: Exceptions when editing polytomous key: I am not really sure what to test here because I do not know how to reproduce the problem. I clicked around and added... Patrick Plitzner
04:21 PM bug #6342 (Closed): Exception when searching for '?' in TaxonNodeSelectionDialog: 1. In Navigator right-click on a taxon
1. Choose "Move Taxon (with children)"
1. Search for all taxon nodes with '?... Patrick Plitzner
09:45 AM feature request #5365 (Feedback): Add delete configurator to Media View image gallery: When trying to delete an unsaved, recently created image from an image gallery I get an NPE
~~~
login : admin
ed... Patrick Plitzner
09:39 AM bug #6334 (Closed): Deleting unsaved TaxonDescription does not work: works fine Patrick Plitzner
09:32 AM bug #6333 (Resolved): Add existing media to a taxon description is not persisted: I removed the option to change an existing media element in the DetailsView. Instead we should add the option to add ... Patrick Plitzner
12:32 AM feature request #5922 (Closed): Change order in supplemental data view: Andreas Müller
12:27 AM bug #6341 (New): Show botanical nomenclatural status types not for zoological names: This is a bit more difficult than #5488 as we first need to figure out which botanical status are purely botanical an... Andreas Müller
12:23 AM bug #6340 (Closed): Update script for nomenclatural status types: Until #5488 was solved it was possible to add a zoological nom status to a botanical name in TaxEditor.
Especially f... Andreas Müller
12:08 AM bug #6307 (Closed): Logfile/exception dialog should show connected datasource: Looks fine now Andreas Müller

01/17/2017

11:55 PM feature request #5714: In Original Source Type dropdown show Primary Taxonomic Source first: Have you checked if we can reuse / combine the Comparator developed for #3185? Andreas Müller
11:52 PM feature request #5714: In Original Source Type dropdown show Primary Taxonomic Source first: ... Also "Other" is not in the expected order. Andreas Müller
11:51 PM feature request #5714 (Feedback): In Original Source Type dropdown show Primary Taxonomic Source first: Only Primary Taxonomic Source is on top, but Primary Media Source is not yet second and also no alphabetic ordering o... Andreas Müller
05:38 PM bug #6339 (Closed): frontendBaseUrl parameter not longer working in web services: Andreas Kohlbecker
05:21 PM bug #6339 (Resolved): frontendBaseUrl parameter not longer working in web services: Applied in changeset commit:cdmlib|fcfd1e30ae194d17b3be1bae4b5f09dcbb52eaa0. Andreas Kohlbecker
05:19 PM bug #6339 (In Progress): frontendBaseUrl parameter not longer working in web services: Andreas Kohlbecker
04:27 PM bug #6339 (Closed): frontendBaseUrl parameter not longer working in web services: see #6338 General notes Andreas Kohlbecker
03:28 PM feature request #6337 (Rejected): simple web ui to trigger the transmission engine distribution: in case #6352 is implemented this issue becomes obsolete Andreas Kohlbecker
02:50 PM bug #6209 (Resolved): NPE in DatasourceView: Andreas Müller
01:00 PM bug #6209: NPE in DatasourceView: The message is changed and a new ticket for the email of the admin is created (#6335). Katja Luther
02:07 PM bug #6336 (Closed): NPE when deleting recently created media: 1. Create new image gallery for a taxon
1. Directly delete the image -> NPE
~~~
!ENTRY eu.etaxonomy.taxeditor.ed... Patrick Plitzner
01:29 PM bug #6333 (In Progress): Add existing media to a taxon description is not persisted: Patrick Plitzner
10:28 AM bug #6333 (Closed): Add existing media to a taxon description is not persisted: When adding an existing media to a taxon the description shows up correctly, but after changing the view and come bac... Katja Luther
01:00 PM feature request #6335 (New): Providing the admin email for each server installation: For some issues the edit support is not responsible for the error messages but the server admin of an instance. There... Katja Luther
12:51 PM feature request #4766 (Resolved): Repair Methods for the cdm instance: I added the sortIndex Updater and the cache updater. Please have a look, if everything works or any suggestions for i... Katja Luther
12:44 PM bug #6283 (Resolved): Exceptions when editing polytomous key: Katja Luther
12:44 PM bug #6283: Exceptions when editing polytomous key: I test it again and it works now. Please test, if there are NPE when editing the key. Katja Luther
11:56 AM bug #6334 (Resolved): Deleting unsaved TaxonDescription does not work: Applied in changeset commit:taxeditor|1f9fcd90f5cd65d1d848ddeb93531e55dc6b100f. Katja Luther
11:03 AM bug #6334 (Closed): Deleting unsaved TaxonDescription does not work: 1. Create new TaxonDescription in FactualData view
1. Delete that TaxonDescription
1. TaxonDescription is still the... Patrick Plitzner
11:25 AM bug #6248 (Resolved): allow machine clients to access /manage/* OAuth2 protected web services: Applied in changeset commit:cdmlib|c05f3fc567c3839ded9d89c6c0f81834fe11e1d2. Andreas Kohlbecker
11:09 AM bug #6248: allow machine clients to access /manage/* OAuth2 protected web services: oauth2 with grant type 'client' is not really needed. It would require that the client can authenticate with username... Andreas Kohlbecker
11:12 AM bug #6281: delete synonym with annotations throws exception: same problem, when the synonym has original sources.
~~~ text
login : W.Greuter
editor version : 4.4.1
server :... Katja Luther
11:00 AM feature request #5365 (Resolved): Add delete configurator to Media View image gallery: Applied in changeset commit:taxeditor|d747b2b97eb8df327a6096e37a9b644cbd950295. Katja Luther

01/16/2017

11:14 AM feature request #6332 (New): cdm-dataportal as oauth2 client of cdm-remote instances: The drupal modules providing oauth2 client functionality:
* [oauth2_client](https://www.drupal.org/project/oauth2_... Andreas Kohlbecker
10:08 AM feature request #5365: Add delete configurator to Media View image gallery: Sorry, I added the delete configuration only to the bulk editor. Will add it to the media galery as well, Katja Luther

01/14/2017

12:44 AM feature request #5365 (Feedback): Add delete configurator to Media View image gallery: Andreas Müller

01/13/2017

05:19 PM bug #6331 (New): Inserting gaps in the AlignmentEditor using the space key does not work anymore: See https://secure.bioinfweb.info/Bugs/Bugzilla/show_bug.cgi?id=153
Workaround: Use the '-' key instead. Ben Stöver
02:05 PM feature request #5365: Add delete configurator to Media View image gallery: There is no popup at all when I delete an image from an image gallery. I tried it with an image attached to a taxon i... Patrick Plitzner
01:27 PM bug #2957 (Resolved): running maven site:site for Taxonomic Editor fails: Andreas Müller
01:23 PM bug #2957: running maven site:site for Taxonomic Editor fails: Andreas Kohlbecker wrote:
> As far as i can see there is no other information from subprojects that needs to be incl... Patrick Plitzner
11:19 AM bug #2957: running maven site:site for Taxonomic Editor fails: As far as i can see there is no other information from subprojects that needs to be included into the site doc.
Add... Andreas Kohlbecker
10:28 AM bug #2957 (Feedback): running maven site:site for Taxonomic Editor fails: On my local machine I tried running `mvn site:site` which at first crashed. Then I tried `mvn install` first and then... Patrick Plitzner
01:15 PM feature request #5055 (Closed): Integrate Luna installation instruction into standard installation instructions: This has been resolved by fixing #6158 Patrick Plitzner
12:07 PM task #6158 (Resolved): Update EDIT documentation from svn to git: Andreas Müller
10:38 AM task #6158 (Feedback): Update EDIT documentation from svn to git: Patrick Plitzner
10:37 AM task #6158 (Resolved): Update EDIT documentation from svn to git: Andreas Kohlbecker wrote:
> Patrick Plitzner wrote:
> > I updated the documentation of taxeditor and cdmlib (change... Patrick Plitzner
10:26 AM task #6158 (Feedback): Update EDIT documentation from svn to git: Andreas Müller
09:46 AM task #6158: Update EDIT documentation from svn to git: Patrick Plitzner wrote:
> I updated the documentation of taxeditor and cdmlib (changed only the repository informati... Andreas Kohlbecker
09:29 AM task #6158: Update EDIT documentation from svn to git: I updated the documentation of taxeditor and cdmlib (changed only the repository information from svn to git here).
... Patrick Plitzner
09:21 AM task #6158 (Resolved): Update EDIT documentation from svn to git: Applied in changeset commit:taxeditor|8e2a3b6327166e1cd821a6dbeb9df2e2a27f4988. Patrick Plitzner
11:18 AM bug #4223: Advanced search returns unexpected results: Works for me in the Corvids test portal now. Gabriele Dröge
11:10 AM bug #4223: Advanced search returns unexpected results: this issue is fully solved now, please do the review asap. Andreas Kohlbecker
10:25 AM bug #4223 (Resolved): Advanced search returns unexpected results: Applied in changeset commit:cdmlib|5c69d02f232481e02f850bfd10404566a8373e5b. Andreas Kohlbecker

01/12/2017

11:59 PM feature request #5922: Change order in supplemental data view: Extensions still could be moved down (taxeditor|55409937). Markers we can leave were they are for now as this is more... Andreas Müller
11:49 PM bug #5698 (Closed): Ampersand (&) is not shown in labels for NameRelationships in details view: seems to work Andreas Müller
10:31 PM bug #4223: Advanced search returns unexpected results: Andreas Kohlbecker wrote:
> Here we are facing two problems:
>
> 1. The portal does not allow to do a phrase sear... Andreas Kohlbecker
06:50 PM bug #4223: Advanced search returns unexpected results: The `ComplexPhraseQueryParser` is still available in the our current lucene version, so we could give this one a try. Andreas Kohlbecker
06:27 PM bug #4223: Advanced search returns unexpected results: Here we are facing two problems:
1. The portal does not allow to do a phrase search with a query string like `"Gar... Andreas Kohlbecker
05:58 PM bug #6227 (Resolved): LIE during request to derivedUnitFacade/{uuid}/collectingareas: Applied in changeset commit:cdmlib|5f3efd0eb42e522ee613872715c821753a1d6004. Andreas Kohlbecker
05:44 PM feature request #6301: Display of sources for images: please do the review Andreas Kohlbecker
01:50 PM feature request #6301 (Resolved): Display of sources for images: Applied in changeset commit:cdm-dataportal|0c2b9b9d85abf12805482981dde310fa1b6c1b45. Andreas Kohlbecker
05:18 PM feature request #6327: Providing the admin email for each server instance somehow: Andreas Müller wrote:
> Do we have an idea who the admin actually is?
> Is it the user "admin" with email stored (o... Andreas Kohlbecker
04:53 PM feature request #6327: Providing the admin email for each server instance somehow: Do we have an idea who the admin actually is?
Is it the user "admin" with email stored (or not) in the CDM?
Or is... Andreas Müller
03:30 PM feature request #6327 (Duplicate): Providing the admin email for each server instance somehow: sometimes it is useful to give contact informations of the server admin to the user, therefore we need this informati... Katja Luther
05:15 PM bug #6329: improve display of media sources and annotations: Andreas Müller wrote:
> I don't understand why the captions are relevant here sources and annotations are not depend... Andreas Kohlbecker
04:49 PM bug #6329: improve display of media sources and annotations: I don't understand why the captions are relevant here sources and annotations are not dependent on the captions and t... Andreas Müller
04:29 PM bug #6329: improve display of media sources and annotations: The sources and annotations are displayed differently in the image gallery and media page.
#### A. Gallery
1. S... Andreas Kohlbecker
04:21 PM bug #6329 (New): improve display of media sources and annotations: follow up of #6301
The sources and annotations are displayed differently in the image gallery and media page.
#... Andreas Kohlbecker
04:50 PM feature request #5671 (Resolved): Name selection should not allow self referencing name relationships: Applied in changeset commit:taxeditor|c1c83a38d07bdc4286ce7abb8b30789d0c32e637. Katja Luther
04:44 PM feature request #5365 (Resolved): Add delete configurator to Media View image gallery: Andreas Müller
02:46 PM feature request #5365: Add delete configurator to Media View image gallery: This works now. Please have a look. I have to find the changeset... Katja Luther
04:28 PM bug #6330 (Closed): Defined sort order for Mediarepresentations: If multiple MediaRepresentations are available for one Media the order is arbitrary as it has set semantics.
This ... Andreas Müller
04:12 PM bug #6328 (New): Warn about available text in other languages if multi-language support is disabled: If multi language support is disabled a Media.description is not shown if it is defined in another language than the ... Andreas Müller
11:28 AM bug #6326: Login from taxeditor not possible after logging out of vaadin distribution editor: Andreas Kohlbecker wrote:
> A problem in the session handling? Maybe solved when #5285 is completed?
>
> Are ther... Patrick Plitzner
10:50 AM bug #6326: Login from taxeditor not possible after logging out of vaadin distribution editor: A problem in the session handling? Maybe solved when #5285 is completed?
Are there any observable abnormality in t... Andreas Kohlbecker
10:01 AM bug #6326 (Worksforme): Login from taxeditor not possible after logging out of vaadin distribution editor: I tested this with flora cuba on the test server (http://test.e-taxonomy.eu/cdmserver/flora_cuba/app/distribution)
... Patrick Plitzner

01/11/2017

02:24 PM bug #6325 (New): Handling of specimen imported via biocase with missing nomenclatural code: for ABCD import the parsing and assignement to an existing name works fine if the identification contains the nomenc... Katja Luther
02:14 PM bug #4377 (Resolved): LazyInitializationException (LIE) related to Team.teamMembers when calling portal/taxon.json: Applied in changeset commit:cdmlib|8e6fba800484afd4d9570c39f630b47e49579624. Andreas Kohlbecker
01:50 PM feature request #6076: Specimen biocase search should work on observations: The specimen search works now on all types of specimen. Find the commit. Katja Luther
12:44 PM bug #6323 (Resolved): LIE during request to name_catalogue/taxon.json: Applied in changeset commit:cdmlib|04a88dbc1f00111e4cb3dfee0b1d940dffdb5bf6. Andreas Kohlbecker
12:09 PM bug #6323: LIE during request to name_catalogue/taxon.json: This bug has been caused by the changes applied through #5974 Andreas Kohlbecker
09:45 AM bug #6323 (Closed): LIE during request to name_catalogue/taxon.json: http://api.cybertaxonomy.org/col/name_catalogue/taxon.json?taxonUuid=19338fc3-dbd5-4bda-8cb3-8da76151f8c4
~~~
C... Andreas Kohlbecker
12:12 PM bug #6324 (Closed): fix dozer mapping after removal of synonym relations and after using TaxonNode: the the dozer mapping file `/cdmlib-remote/src/main/resources/eu/etaxonomy/cdm/remote/dto/tdwg/mappings-deep.xml` a p... Andreas Kohlbecker
11:43 AM bug #6151: implement pager for search service: Hi Andreas,
We have now implemented this, and (on top) added a REST service.
http://www.eu-nomen.eu/portal/webser... Andreas Kohlbecker

01/10/2017

04:19 PM bug #6322 (Closed): In the specimen editor showing the warning for long loading times already has a long loading time: I tried this on the campanula test DB when searching for 'Ar*' Patrick Plitzner
03:06 PM bug #6307 (Resolved): Logfile/exception dialog should show connected datasource: Applied in changeset commit:taxeditor|5b6653af71b7c1d3ae3998057cf3fa7502a76a58. Patrick Plitzner
01:46 PM bug #6307 (In Progress): Logfile/exception dialog should show connected datasource: Patrick Plitzner
01:58 PM feature request #4246 (Resolved): Allow inserting a new node at the beginning or somewhere else in the Polytomous Key tree: Applied in changeset commit:taxeditor|40bd7837ec825e5caa98e20ae64592eab98c71c1. Katja Luther
01:13 PM feature request #6321 (Closed): Implement parallel loading + progress bar for loading objects into the bulk editor: Patrick Plitzner
11:52 AM bug #4377: LazyInitializationException (LIE) related to Team.teamMembers when calling portal/taxon.json: Potentially a duplicate of #6317 Andreas Kohlbecker
11:40 AM bug #6319 (New): change background color if changing focus from name editor to another view: Hallo,
grundsätzlich ist das nicht völlig falsch, da der Fokus dieses Fensters ja weiterhin auf der entsprechenden... Katja Luther
10:33 AM bug #6244: Sortindex problems in complex operations like swap synonym and accepted and others: This was part of the bugfix release as far as I remember Andreas Müller
09:42 AM bug #6296 (Resolved): Simple search for common names returns duplicates: Katja Luther

01/09/2017

11:11 PM feature request #3465: Function to copy secundum reference of a given taxon node to all it's children: Applied in changeset commit:cdmlib|06bf3273fe5580bb9201cb85fe829a18885a6942. Andreas Müller
06:03 PM bug #6318 (Closed): Truncate TextData in FactualData View: Walter:
Hallo Andreas,
wir sind jetzt der Sache mit den angeblich verstümmelten Editorial Notes und Notes auf di... Andreas Müller
04:11 PM bug #6317 (Resolved): LIE during request to portal/taxon/find.json: Applied in changeset commit:cdmlib|79902c85abf9675dbc9838a71327de7a54b53dd4. Andreas Kohlbecker
12:31 PM bug #6317 (Closed): LIE during request to portal/taxon/find.json: http://api.cybertaxonomy.org/salvador/portal/taxon/find.json?doTaxaByCommonNames=1&doMisappliedNames=1&doSynonyms=1... Andreas Kohlbecker
03:29 PM bug #6296 (In Progress): Simple search for common names returns duplicates: With the test case mentioned in #6317 an exception is thrown:
~~~
2017-01-09 15:26:32.283:WARN:oejs.ServletHandle... Andreas Kohlbecker
03:12 PM bug #6296 (Resolved): Simple search for common names returns duplicates: Applied in changeset commit:cdmlib|8311a989da231228857d6330f10d14286e93e6fe. Katja Luther
02:32 PM bug #6296: Simple search for common names returns duplicates: The commonNameSearch is now integrated into the taxa and synonym search query. Katja Luther
09:34 AM bug #6296: Simple search for common names returns duplicates: The method in question is
~~~java
Pager<IdentifiableEntity> eu.etaxonomy.cdm.api.service.TaxonServiceImpl.findT... Andreas Kohlbecker
11:36 AM feature request #6316: display source references of media objects in media page: In the media page the display of sources is missing. Andreas Kohlbecker
11:34 AM feature request #6316 (Closed): display source references of media objects in media page: * The sources should be an ordinary attribute here, not integrated in any footnote or annotation framework
* Conside... Andreas Kohlbecker

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