Project

General

Profile

Activity

From 01/05/2017 to 02/03/2017

02/03/2017

10:38 PM Revision 7e5f47cb (taxeditor): ref #2939 adapting taxeditor spring configuration to new ehCacheMa...
Andreas Kohlbecker
04:33 PM Revision 15911e5d (cdm-vaadin): ref #2939 adapting vaddin appcontext to new ehcache configuration
Andreas Kohlbecker
04:24 PM Revision f2b6ba81 (cdmlib): ref #2939 renaming moved class references in log4j files
Andreas Kohlbecker
04:24 PM Revision e3e0e316 (cdmlib): ref #2939 taking configurations out of the compenent scan\n, a more f...
Andreas Kohlbecker
03:02 PM Revision cf4b82a5 (taxeditor): fix import issue
Andreas Müller
02:50 PM Revision a4caff94 (cdm-vaadin): ref #6362 fix NonViralName occurrence in vaadin
Andreas Müller
02:38 PM Revision 0de7b2f4 (cdmlib): simplify generics for SpecimenOrObservationBase
Andreas Müller
02:37 PM Revision 804a5884 (taxeditor): fix generics
Andreas Müller
02:03 PM Revision b8601e0c (taxeditor): ref #6362 remove occurrences of NonViralName in code and some cle...
Andreas Müller
01:44 PM Revision 1dd3792c (cdmlib): ref #6409 preliminary set Level3 test to @Ignore to avoid infinite loop
Andreas Müller
01:44 PM Revision 514a53eb (cdmlib): cleanup
Andreas Müller
01:44 PM Revision aaf432fa (cdmlib): cleanup merge problems
Andreas Müller
01:44 PM Revision e2c8bd0e (cdmlib): cleanup
Andreas Müller
01:44 PM Revision d7919b1c (cdmlib): ref #6362, ref #6365 remove occurrence of NonViralName, BotanicalName...
Andreas Müller
01:43 PM Revision 7a7b09d4 (cdm-dataportal): fixing 2 bugs in media caption creation
Andreas Kohlbecker
01:27 PM bug #6409 (Closed): Fix failing Level3 validation in ValidationTest introduced by removing TaxonN...
method is testLevel3ValidationWithValidName was set to @Ignore
The problem occurs in org.hibernate.validator.inter...
Andreas Müller
01:18 PM Revision 0afc0c3c (cdm-dataportal): palmweb: disabling custom media caption theme function
Andreas Kohlbecker
12:52 PM Revision d1b5fd22 (cdm-dataportal): Merge tag '4.5.4' into develop
tag for hotfix release 4.5.4 Andreas Kohlbecker
12:52 PM Revision bc8dcfa0 (cdm-dataportal): Merge branch 'hotfix/4.5.4'
Andreas Kohlbecker
12:36 PM feature request #3580 (Duplicate): Write permission error with temporary cdmserver echache dir
Andreas Kohlbecker
12:33 PM bug #1753 (Worksforme): error in server due to level2 cache
this is no longer a problem Andreas Kohlbecker
12:29 PM feature request #5848 (Resolved): Problem with writing ehCache folder on network drive using UNC ...
This issue most probably has been fixed while solving #2939
@Patrick: please review
Andreas Kohlbecker
12:22 PM bug #2939 (Resolved): ehcache diskStore conflict?
Applied in changeset commit:cdmlib|1fd4a547b99301f06524ab828dc5eb4ef8af3c10. Andreas Kohlbecker
12:21 PM Revision 7a0bcdb6 (cdmlib): ref #2939 refactoring CdmCacher to use cachemanger spring bean - not ...
Andreas Kohlbecker
12:21 PM Revision 1fd4a547 (cdmlib): fix #2939 dynamic configuration of the ehcache store location per rem...
Andreas Kohlbecker
11:15 AM Revision 5805c395 (cdmlib): #6401 update generics for java1.8 upgrade
Andreas Müller
11:15 AM Revision 5a9b66ae (cdmlib): Cleanup
Andreas Müller
10:53 AM bug #6408 (Resolved): NPE in AbcdParseUtility
Applied in changeset commit:cdmlib|5adaf48060a375396e01bbc9eaea06c114b0403a. Patrick Plitzner
10:52 AM bug #6408 (Closed): NPE in AbcdParseUtility
~~~
login : admin
editor version : 4.5.1
server : 160.45.63.230 (edit-WS I) / caryophyllales_demo_01
schema...
Patrick Plitzner
10:52 AM Revision 5adaf480 (cdmlib): fix #6408 Fix potential NPE in AbcdParseUtility
Patrick Plitzner
10:08 AM Revision 3a269e2c (taxeditor): ref #6401 Add comment for increasing tycho version
Patrick Plitzner
09:36 AM Revision 02569618 (taxeditor): ref #6401 Update jetty plugin to work with jdk1.8
Patrick Plitzner
09:36 AM Revision 606b6d7c (cdmlib): ref #6401 Update jetty plugin to work with jdk1.8
Patrick Plitzner

02/02/2017

11:04 PM bug #6404: StackOverflow when compiling large java classes in Java8 (jdk1.8)
@PP: if you still if the old version of the compilerArgs, could you please add them to the ticket? Andreas Müller
10:59 PM bug #6404 (Rejected): StackOverflow when compiling large java classes in Java8 (jdk1.8)
We decided to NOT use the compilerArgs but rather try to fix the large class issue #6406.
Also the above compilerA...
Andreas Müller
01:09 PM bug #6404 (Closed): StackOverflow when compiling large java classes in Java8 (jdk1.8)
Andreas M.: Can you link the ticket for the MarkupTransformer class to this ticket? Patrick Plitzner
01:06 PM bug #6404 (Rejected): StackOverflow when compiling large java classes in Java8 (jdk1.8)
After updating to Java 8 compiling via `mvn clean install` results in a StackOverflow. (compiling in Eclipse works be... Patrick Plitzner
11:03 PM bug #6407: Upgrade maven compiler plugin to latest version
Maybe a related commit: https://dev.e-taxonomy.eu/redmine/projects/edit/repository/revisions/1ddde622ae10b01976cdb99f... Andreas Müller
10:58 PM bug #6407 (New): Upgrade maven compiler plugin to latest version
Currently this is not yet possible as it results in test errors probably related to missing aspectj support. This pro... Andreas Müller
05:16 PM bug #6405 (Closed): CdmPermissionVoter handles merged and separate CdmAuthorities the same
Andreas Kohlbecker
05:16 PM bug #6405: CdmPermissionVoter handles merged and separate CdmAuthorities the same
reverting commit:cdmlib|5cb08c3f by commit:cdmlib|bb902a4 Andreas Kohlbecker
04:55 PM bug #6405 (Resolved): CdmPermissionVoter handles merged and separate CdmAuthorities the same
Applied in changeset commit:cdmlib|3e29fc14020cbf9604f9ec4a8ae87fcadbbb3d3f. Andreas Kohlbecker
02:56 PM bug #6405 (Closed): CdmPermissionVoter handles merged and separate CdmAuthorities the same
The CdmPermissionVoter must take all CdmAuthorities into account which only differ by the property if any is defined ... Andreas Kohlbecker
04:56 PM task #6401 (Resolved): Update working environment to jdk 1.8
We still need to check for any dependencies that can be updated now. Or we leave this to the next general dependency ... Andreas Müller
04:54 PM task #6401: Update working environment to jdk 1.8
Some generics in model needed to be updated (no ticket for this). This also lead to a refactoring for DefinedTermBase... Andreas Müller
04:51 PM bug #6406 (In Progress): Refactor MarkupTransformer class which is too large
Andreas Müller
04:50 PM bug #6406 (In Progress): Refactor MarkupTransformer class which is too large
The large class creates problems when upgrading to java 1.8 (see #6401 and #6404).
As a work around we now comment...
Andreas Müller
04:41 PM Revision b6bb07b9 (taxeditor): ref #6309 Add missing l10n String constant to Messages.java
Patrick Plitzner
04:35 PM Revision bb902a45 (cdmlib): Revert "ref #6401 fix failing SecurityTest (due to wrong handling of ...
This reverts commit 5cb08c3f89abfd1bcb5af75f0b2882798418f27a. Andreas Kohlbecker
04:35 PM Revision 792e3464 (cdmlib): ref #6405 tests for the CdmPermissionVoter
Andreas Kohlbecker
04:35 PM Revision 3e29fc14 (cdmlib): fix #6405 more tests for CdmPermissionVoter.furtherVotingDescisions a...
Andreas Kohlbecker
04:35 PM Revision ae3b8a5d (cdmlib): ref #922 and #6311 javadoc
Andreas Müller
04:30 PM bug #6311 (In Progress): Refactor IdentifiableEntity.compareTo method
The 2 fixes dfc40f67 and 44e2abe8 primarily fixed #922 and not THIS ticket.
However, during this process we realiz...
Andreas Müller
03:00 PM bug #6311 (Resolved): Refactor IdentifiableEntity.compareTo method
Applied in changeset commit:cdmlib|dfc40f673035647ff6af03097229edd1e7712222. Andreas Müller
01:27 PM bug #6311 (In Progress): Refactor IdentifiableEntity.compareTo method
Andreas Müller
04:21 PM feature request #922 (Resolved): Implement compareTo method in IdentifiableEntity properly
Revision showed that

* the method was never used by different classes and therefore the parameter does not need t...
Andreas Müller
04:05 PM Revision 44e2abe8 (cdmlib): ref #6311 further refactoring for compareToEntity
Andreas Müller
04:05 PM Revision 2fd31c0f (cdmlib): cleanup
Andreas Müller
03:42 PM Revision de118cd2 (taxeditor): ref #6401 Update taxeditor workspace plugins to java 8
Patrick Plitzner
03:06 PM Revision 504f6f42 (cdmlib): cleanup
Andreas Müller
03:00 PM Revision dfc40f67 (cdmlib): fix #6311 move compareToEntity method to TaxonName and TaxonBase clas...
Andreas Müller
02:59 PM Revision 64923004 (cdmlib): Remove generics from BacterialNameDefaultCacheStrategy
Andreas Müller
02:58 PM Revision 168e8915 (cdmlib): ref #6401 Adapt generics in agent base and others
Andreas Müller
02:55 PM Revision 940ecc18 (cdmlib): cleanup
Andreas Müller
02:12 PM Revision a9450437 (taxeditor): ref #6401 Refactor comparison of specimens in factual data view
- use titleCache comparison instead of comparing the objects themselves
- also fixes compile error for jdk1.8
Patrick Plitzner
02:11 PM Revision ca14b284 (cdmlib): ref #6401 Remove compiler args for increased stack size
Patrick Plitzner
02:10 PM bug #6304 (Resolved): Deleting of Person used as user does not work
Applied in changeset commit:taxeditor|d1428f78d00bd439e471e03c5a13a68763818c29. Katja Luther
02:10 PM Revision d1428f78 (taxeditor): fix #6304: before deleting a person in bulkeditor check with isDel...
Katja Luther
01:56 PM bug #6309: Creating an existing user throws exception
added a check for existence of users with the same username before saving the new user Katja Luther
01:54 PM bug #6309 (Resolved): Creating an existing user throws exception
Applied in changeset commit:taxeditor|afc2457c7a4661cd1577fd486211da032354a61c. Katja Luther
01:54 PM Revision afc2457c (taxeditor): fix #6309: check for existence of user before saving a new user
Katja Luther
01:53 PM Revision 0e5acce8 (cdmlib): merge for groups has to check for existing and changed authorities be...
Katja Luther
01:37 PM bug #6388 (Resolved): Duplicate entry exception when adding types to a taxon
should be solved with fixing #6300. Could not reproduce it anymore. Katja Luther
01:07 PM bug #6300: DataIntegrityViolationException when saving a type
Applied in changeset commit:taxeditor|e904eb89dc409f901b858e5936cbc08eef82f7fc. Katja Luther
01:06 PM bug #6300 (Resolved): DataIntegrityViolationException when saving a type
I removed the bindNullSession call and now it works. Please have a look, if everything else works, too. (I tested cre... Katja Luther
01:03 PM Revision aa819c53 (taxeditor): remove comment
Katja Luther
01:01 PM Revision e904eb89 (taxeditor): fix #6300: the newDerivedUnitWizard should not have a session
Katja Luther
11:50 AM Revision a24dbf07 (cdmlib): emall fix for selection of reference as inreference
Katja Luther
10:52 AM bug #5216: Changing the CRUD flags of an existing GrantedAuthority in the CdmAuthorityEditorInput...
added a check for existence of all authority strings and replace the already existing ones with the ones already in d... Katja Luther
10:04 AM bug #5216 (Resolved): Changing the CRUD flags of an existing GrantedAuthority in the CdmAuthority...
Applied in changeset commit:taxeditor|a789364c344b94462f1e277ee1855eea2615e59b. Katja Luther
10:46 AM Revision 27c25f7e (taxeditor): minor
Katja Luther
10:04 AM Revision a789364c (taxeditor): fix #5216: merge grantedAuthority checks for existing grantedAutho...
Katja Luther
08:41 AM bug #6403 (New): palmweb: Show image thumbnail tickbox no longer working
This could be due to divergence of the palmweb special code with the dataportal core code.
The purpose of the specia...
Andreas Kohlbecker
08:35 AM bug #6402 (New): palmweb: remove comment module related code and disable comments
Andreas Kohlbecker
07:51 AM task #6392 (Closed): selenium tests for palmweb uses data
Andreas Kohlbecker
01:58 AM Revision 72084210 (cdmlib): ref #6401 Upgrade jetty plugin to support j1.8
Andreas Müller
01:29 AM Revision f0aff81a (cdmlib): ref #6401 temporarily remove uuids from MarkupTransformer to allow co...
Andreas Müller

02/01/2017

12:26 AM Revision e2d30c43 (cdmlib): ref #6401 Improve generics for TypeDesignationStatusBase and Relation...
Andreas Müller
12:23 AM Revision ad631208 (cdmlib): ref #6401 fix compilation errors in OrderedTermBaseTest
Andreas Müller
12:19 AM Revision 5cb08c3f (cdmlib): ref #6401 fix failing SecurityTest (due to wrong handling of furtherV...
Andreas Müller
12:17 AM Revision 53c346f1 (cdmlib): ref #6401 better distinguish IdentifiableEntity.compareTo from Define...
* this is to avoid jumping to IdentifiableEntity.compareTo if DefinedTermBase.compareTo does not match generics exactly Andreas Müller
12:04 AM Revision b1398c11 (cdmlib): Cleanup
Andreas Müller
09:37 PM Revision caea94d1 (cdmlib): ref #6401 revert maven compiler plugin version as it leads to failin...
Andreas Müller
08:44 PM task #1606: Restrict filtered selection of in references to the respective reference types
Katja Luther wrote:
> Applied in changeset commit:cdmlib|a80bb20e9da22230326d65598b4cf07ff1a5dff5.
There was a ...
Andreas Müller
11:44 AM task #1606: Restrict filtered selection of in references to the respective reference types
implemented for:
Article -> journal
InProceedings -> proceedings
Booksection -> book
book -> printSeries
proce...
Katja Luther
11:40 AM task #1606 (Resolved): Restrict filtered selection of in references to the respective reference t...
Applied in changeset commit:cdmlib|a80bb20e9da22230326d65598b4cf07ff1a5dff5. Katja Luther
08:41 PM Revision f4a1c455 (cdmlib): ref #1606 fix bug in referenceDao.getUuidAndTitleCache
Andreas Müller
08:37 PM Revision 5a0834fb (cdmlib): Cleanup
Andreas Müller
06:01 PM Revision e9c765f3 (taxeditor): increase maven-source-plugin, decrease tycho
Patrick Plitzner
04:44 PM Revision 57db64f2 (taxeditor): Update tycho version
Patrick Plitzner
04:09 PM Revision ef029497 (taxeditor): ref #6401 Update taxeditor to jdk1.8
- Fix generic problems Patrick Plitzner
03:34 PM Revision 5575b26c (cdmlib): ref #6392 ref #6374 fixing markerType filter was ignored
Andreas Kohlbecker
03:19 PM Revision 2a25d458 (cdmlib): ref #6401 Fix problems with generics due to jdk1.8
Patrick Plitzner
02:15 PM bug #3737: Protected caches for taxa and names behave inconsistent
please review Katja Luther
02:14 PM bug #3737 (Resolved): Protected caches for taxa and names behave inconsistent
Applied in changeset commit:taxeditor|a452be91ae106b545b4393798e666aef347a0ef1. Katja Luther
02:14 PM Revision a452be91 (taxeditor): fix #3737: improve handling of protected/not protected cache fields
Katja Luther
01:54 PM task #6392 (Resolved): selenium tests for palmweb uses data
Applied in changeset commit:cdm-dataportal|1b756c5f0a44f01502a0f88ff155e124e93860c8. Andreas Kohlbecker
09:28 AM task #6392 (In Progress): selenium tests for palmweb uses data
Andreas Kohlbecker
01:54 PM Revision 1b756c5f (cdm-dataportal): fix #6392 test for uses and use records and refactoring of th...
- fixing wrong assumptions for cyprus
- bibliography as pseudo feature block better testable
Andreas Kohlbecker
11:57 AM Revision 3c5fd363 (cdmlib): ref #6401 Updated cdmlib to jdk1.8
- Had to increase the parser stack size to avoid StackOverflow when
parsing large java classes
- https://maven.apac...
Patrick Plitzner
11:49 AM task #6401 (Closed): Update working environment to jdk 1.8
Patrick Plitzner
11:43 AM Revision 6478a5d8 (cdmlib): fix #1606: minor
Katja Luther
11:39 AM Revision a80bb20e (cdmlib): fix #1606: add generic type to all filters
Katja Luther
11:11 AM Revision 16b736f1 (taxeditor): ref #1606: for inReferences use service methods filtering for the ...
Katja Luther
11:05 AM Revision 71bfbee0 (cdmlib): ref #1606: add methods to provide filter for reference type
Katja Luther
09:24 AM Revision b9a4f351 (cdm-dataportal): ref #6392 problems in selenium tests for palmweb solved
- disabled test active again
- splitting huge test method into multiple
- trimming reference citation strings in ...
Andreas Kohlbecker
09:20 AM Revision 5e1b1f4e (cdm-dataportal): duplicating images in flora malesiana theme to fix missing im...
Andreas Kohlbecker
09:18 AM Revision bf4b3dfa (cdm-dataportal): using glue string for distribution list
and using this for palmweb to make the original layout working again Andreas Kohlbecker
09:16 AM Revision e6dec945 (cdm-dataportal): harmonizing indentation of feature block distribution
Andreas Kohlbecker
09:15 AM Revision c59f8a57 (cdm-dataportal): fixing invalid xpath to link elements
Andreas Kohlbecker

01/31/2017

04:03 PM Revision 4295d33d (cdm-dataportal): ref #6374 moving cdm_block_use_description_content to include...
Andreas Kohlbecker
04:02 PM Revision d192702d (cdm-dataportal): ref #6374 using the correct feature block settings for use de...
Andreas Kohlbecker
02:49 PM bug #6138 (In Progress): fix test testNoRecursiveChangeEvents() in DerivedUnitFacadeTest
in eclipse the test is successfull, but with maven it fails... Katja Luther
12:56 PM bug #6138 (Resolved): fix test testNoRecursiveChangeEvents() in DerivedUnitFacadeTest
Katja Luther
12:55 PM bug #6138: fix test testNoRecursiveChangeEvents() in DerivedUnitFacadeTest
the test does not fail anymore. Katja Luther
02:48 PM Revision e8b30a54 (cdmlib): fix #4390: add missing check for protected titleCache
Katja Luther
02:16 PM bug #6374 (Closed): Uses no longer shown in palmweb portal broken
Andreas Kohlbecker
02:02 PM bug #6374 (Resolved): Uses no longer shown in palmweb portal broken
Applied in changeset commit:cdm-dataportal|4feafea8403142f30c31c0a612b0b2a2de1f76bf. Andreas Kohlbecker
02:02 PM Revision 4feafea8 (cdm-dataportal): fix #6374 fixing messed up UUIDs and harmonizing use descript...
Andreas Kohlbecker
02:01 PM Revision 99f17fa9 (cdm-dataportal): fixing type in documentation
Andreas Kohlbecker
02:00 PM Revision 867bd81d (cdmlib): fix #4390: update titlecache only for SpecimenOrObservationBase entities
Katja Luther
12:45 PM bug #4390: Titlecache of field unit does not update when changing field unit data via derived uni...
please review Katja Luther
12:44 PM bug #4390 (Resolved): Titlecache of field unit does not update when changing field unit data via ...
Applied in changeset commit:cdmlib|5d6b7e01b19c421947455d7a74bd97a907de60aa. Katja Luther
12:44 PM Revision 5d6b7e01 (cdmlib): fix #4390: update titlecache for all merged identifiableEntities
Katja Luther
12:10 PM bug #5924 (Resolved): Change password leads to bad credentials
Applied in changeset commit:taxeditor|1c082d5b9b3063e5be95e2520fdb6c4a62da2388. Katja Luther
12:10 PM Revision 1c082d5b (taxeditor): fix #5924: reauthenticate after changing the password
Katja Luther
11:49 AM feature request #6076: Specimen search should work on observations
the search works on all record basis now.
we need to check whether the model covers all types.
Katja Luther
11:37 AM bug #6336 (Resolved): NPE when deleting recently created media
this is already fixed. see associated revision. Katja Luther

01/30/2017

08:50 PM Revision 55dd353b (cdmlib): ref #6362 remove further occurrences of NonViralName
Andreas Müller
05:52 PM bug #6400 (New): Palmweb feature 'Number of Taxa' no longer working
reported in 'RE: A few problems with EDIT Platform 3.3.3' by Lauren Gardiner (28.04.2014 15:19) :
----
'Number ...
Andreas Kohlbecker
04:50 PM bug #6374: Uses no longer shown in palmweb portal broken
was still broken due to #6398 Andreas Kohlbecker
04:47 PM bug #6398 (Closed): portal/taxon/{uuid}/descriptions.json with markerType-filter returns no data
Andreas Kohlbecker
03:33 PM bug #6398 (Resolved): portal/taxon/{uuid}/descriptions.json with markerType-filter returns no data
Applied in changeset commit:cdmlib|f540b1391e26e2dd6733d19bff2bfb2cfa3c40fa. Andreas Kohlbecker
01:43 PM bug #6398 (Closed): portal/taxon/{uuid}/descriptions.json with markerType-filter returns no data
The portal web service `portal/taxon/{uuid}/descriptions.json` with `markerType` filter returns no data.
In contrast...
Andreas Kohlbecker
04:43 PM Revision d3616f2c (cdm-dataportal): ref #6398 adapting dataportal to harmonized description relat...
Andreas Kohlbecker
03:53 PM feature request #6367 (In Progress): Make NomenclaturalCode an attribute ("type") of TaxonNameBase
Andreas Müller
03:33 PM Revision f540b139 (cdmlib): fix #6398 messing up and harmonizing description related taxon servic...
Andreas Kohlbecker
03:33 PM Revision f2f1be49 (cdmlib): removing unused method which was created for palmweb
Andreas Kohlbecker
03:27 PM bug #6322: In the specimen editor showing the warning for long loading times already has a long l...
Check first on production. Andreas Müller
02:59 PM bug #6347: Improve layout for navigator sorttype selection
.. or use dropdown Andreas Müller
02:53 PM bug #6372 (Resolved): NPE when using ShowView - Datasource
Applied in changeset commit:taxeditor|a286b342b8d1606be85d96505eb507fe93abe97b. Andreas Müller
02:53 PM Revision a286b342 (taxeditor): fix #6372 fix NPE in datasource view
Andreas Müller
02:37 PM bug #6389: Returning a Map in cdmlib leads to data loss
Check if this method is used elsewhere. If not make it deprecated with reason that it currently gives not the expecte... Andreas Müller
01:52 PM feature request #6399 (Closed): Add admin property frequently used biocase provider
For a better handling in biocase import we need an admin property which contains the main biocase provider of the pro... Katja Luther
01:42 PM Revision e48774bc (taxeditor): ref #6365 use TaxonNameFactory for factory methods in TaxEditor
Andreas Müller
01:28 PM Revision ded3de15 (cdmlib-apps): ref #6365 use TaxonNameFactory for factory methods in cdmlib-app
Andreas Müller
01:12 PM Revision 5d206c8e (cdmlib): ref #6365 use TaxonNameFactory for static parser methods
Andreas Müller
12:09 PM bug #6397 (Closed): palmweb: various feature blocks missing
Andreas Kohlbecker
12:03 PM bug #6397 (Resolved): palmweb: various feature blocks missing
Applied in changeset commit:cdm-dataportal|caab0bd280def9962d6c979e41719ce462c35163. Andreas Kohlbecker
11:33 AM bug #6397: palmweb: various feature blocks missing
This is a bug which has been introduced while solving #6114 and #4379 commit. Andreas Kohlbecker
10:46 AM bug #6397 (Closed): palmweb: various feature blocks missing
In the palmweb portal various feature blocks are missing.
At the example of *Calamus aruensis*:
This taxon has ...
Andreas Kohlbecker
12:03 PM Revision 20541fd4 (cdm-dataportal): Merge tag '4.5.3' into develop
tag for hotfix release 4.5.3 Andreas Kohlbecker
12:02 PM Revision 037cdbf5 (cdm-dataportal): Merge branch 'hotfix/4.5.3'
Andreas Kohlbecker
12:02 PM Revision caab0bd2 (cdm-dataportal): fix #6397 ref #4379 fixing empty feature block content detection
Andreas Kohlbecker
11:07 AM Revision fe34a9eb (cdmlib): ref #6365 use TaxonNameFactory for botanical names
Andreas Müller
10:56 AM Revision 033fa0b2 (cdmlib): ref #6365 use TaxonNameFactory for zoological names
Andreas Müller
10:55 AM Revision a24ddafd (cdm-dataportal): removing invalid uuid constant
Andreas Kohlbecker
10:52 AM task #6360: Move NonViralName functionality to TaxonNameBase
Applied in changeset commit:cdmlib|df5738fefc6971d38b6cb364accd0b38af6a69d8. Andreas Müller
10:52 AM Revision df5738fe (cdmlib): fix #6360 use TaxonNameFactory for NonViralNames
Andreas Müller
10:45 AM task #6364 (Resolved): Merge viral names and bacterial names into TaxonNameBase
Applied in changeset commit:cdmlib|6369aae2b548ac9f046ff2a8e755326226ec7904. Andreas Müller
10:45 AM Revision 6369aae2 (cdmlib): fix #6364 use TaxonNameFactory for viral and bacterial names
Andreas Müller
10:41 AM task #6366 (Resolved): Merge cultivar names into TaxonNameBase
Applied in changeset commit:cdmlib|174ae83b06b5d01305560d46a3391c520d471354. Andreas Müller
10:38 AM Revision 174ae83b (cdmlib): fix #6366 use TaxonNameFactory for cultivar names
Andreas Müller
01:34 AM Revision 6de1d1c3 (taxeditor): ref #6365 ref #6366 ref 6364 Update CdmModelCacher in TaxEditor
Andreas Müller
01:29 AM Revision 42f99e54 (taxeditor): ref #6362 and ref #6365 remove some NVN and Bot/Zoo name occurrenc...
Andreas Müller

01/29/2017

12:24 AM Revision 396a8759 (cdmlib): ref #6362 remove some further NVN occurrences
Andreas Müller
12:24 AM Revision 6eeff533 (cdmlib): ref #6365 Move zoological parse methods to TaxonNameBase
Andreas Müller
12:24 AM Revision 2d370ced (cdmlib): ref #6366 move cultivar attributes and functions to TaxonNameBase
Andreas Müller
12:24 AM Revision 066f7886 (cdmlib): Remove isCodeCompliant from TaxonNameBase
Andreas Müller
12:24 AM Revision e8b59a14 (cdmlib): cleanup
Andreas Müller
12:24 AM Revision da39aca0 (cdmlib): ref #6365 merge static methods from BotanicaName to TaxonNameBase
Andreas Müller
12:24 AM Revision 0d8c0513 (cdmlib): ref #6365 ref #6360 ref #6364 replace taxon name factory methods
Andreas Müller
12:24 AM Revision 18b50091 (cdmlib): ref #6365 replace ZoologicalName factory methods
Andreas Müller
12:24 AM Revision 5b88f807 (cdmlib): ref #6360 replace NonViralName factory methods
Andreas Müller
12:24 AM Revision 8eea91a5 (cdmlib): ref #6365 Move all ZoologicalName attributes up to TaxonNameBase
Andreas Müller
12:24 AM Revision 536aae8b (cdmlib): ref #6364 Move all BacterialName attributes up to TaxonNameBase
Andreas Müller
12:24 AM Revision 02736ff3 (cdmlib): ref #6364 Move all ViralName attributes up to TaxonNameBase
Andreas Müller
12:24 AM Revision 1ff3286f (cdmlib): minor
Andreas Müller

01/27/2017

12:55 AM task #6366 (In Progress): Merge cultivar names into TaxonNameBase
Andreas Müller
05:29 PM bug #6365: Merge botanical and zoological names into TaxonNameBase
moving "anamorphic" requires an update script. Andreas Müller
01:10 AM bug #6365 (In Progress): Merge botanical and zoological names into TaxonNameBase
Andreas Müller
05:09 PM bug #6382 (Closed): option to supply user credentials in the admin setting for the freetext index...
Andreas Kohlbecker
05:09 PM bug #6393 (Closed): manage/* web service can be used by ajax requests
Andreas Kohlbecker
02:12 PM bug #6393 (Resolved): manage/* web service can be used by ajax requests
Applied in changeset commit:cdmlib|1a5de38db1f2422d9596b1bb6fbba7a130b0c00e. Andreas Kohlbecker
02:08 PM bug #6393 (Closed): manage/* web service can be used by ajax requests
As of `/manage/*` requiring authentication these services can no longer be used via ajax with cross domain requests. ... Andreas Kohlbecker
05:05 PM feature request #6396 (New): taxontree takes HTTP_REFERER into account to focus on the previously...
The taxon tree should evaluate taxon uuids in the HTTP_REFERER.
This will allow to the taxontree to be open at the...
Andreas Kohlbecker
04:03 PM bug #6383: fatal error on git push: The remote end hung up unexpectedly
I just had the same problem:
1. I tried to push but the VPN connection was disconnected.
1. After connecting via ...
Patrick Plitzner
04:02 PM Revision 59cd56c3 (taxeditor): Reverting the last version updates
Patrick Plitzner
03:55 PM Revision f9379882 (taxeditor): Increase java code level to java 1.8
Patrick Plitzner
03:32 PM feature request #6390: Details view for misapplied names
WGB: Habe wg. lat. Formulierung für "missapplied acc. to" eine Anfrage an Greuter geschickt. Walter Berendsohn
12:09 PM feature request #6390 (Closed): Details view for misapplied names
We need a details view for misapplied names to allow editing also information within the concept relationship (most i... Andreas Müller
03:21 PM feature request #6395: Define a taxon concept relationship for somehow related concepts
AM: Die Frage wäre nur, wie der Typ genauso definiert und gelabelt sein könnte. Z.B. „deviating concept“? Und im Menu... Andreas Müller
02:54 PM feature request #6395 (New): Define a taxon concept relationship for somehow related concepts
These concepts are currently often handled as misapplications which is wrong. For a discussion see #6112. Andreas Müller
02:52 PM feature request #6394 (New): Allow additional taxon relationships in TaxEditor to be handled simi...
Currently users create misapplications when they want to add somehow related but differing concepts. For a discussion... Andreas Müller
02:12 PM Revision 1a5de38d (cdmlib): fix #6393 enabling manage services to be accessed via ajax with authe...
Andreas Kohlbecker
01:07 PM Revision ed925ac3 (taxeditor): Update tycho version from 0.22.0 to 0.26.0
Patrick Plitzner
12:19 PM task #6392 (Closed): selenium tests for palmweb uses data
Taxa as test cases:
* Phytelephas macrocarpa Ruiz & Pav.
* many UseDescriptions (UseRecords)
* Calamus aruensis...
Andreas Kohlbecker
12:18 PM bug #6374: Uses no longer shown in palmweb portal broken
This went to the hotfix, and should be reviewed. If possible this should be done by Bill since I am not sure if all U... Andreas Kohlbecker
12:00 PM bug #6374: Uses no longer shown in palmweb portal broken
Can this be closed or should it be reviewed. Is it the correct milestone (went into hotfix?). Andreas Müller
12:14 PM feature request #6391: Show misapplied name concept relation attributes in data portal
More or less blocked by #6390 as we do not have data yet. However, it could be implemented already. Andreas Müller
12:13 PM feature request #6391 (New): Show misapplied name concept relation attributes in data portal
for more information see #6390 Andreas Müller
12:02 PM bug #6381 (In Progress): Specimen titleCache should include barcode or catalogue number if access...
Andreas Müller
01:09 AM task #6362 (In Progress): Remove occurrence of NonViralName in code
Andreas Müller

01/26/2017

11:50 PM task #6364 (In Progress): Merge viral names and bacterial names into TaxonNameBase
Andreas Müller
07:53 PM Revision 1b7f25fe (taxeditor): ref #6389 avoid service call for icon determination (performance)
- additionally the service call returned undeterministic results pplitzner
07:44 PM bug #6389 (Closed): Returning a Map in cdmlib leads to data loss
I added the following method to IService/ServiceBase. I then invoked it on the taxeditor side in different places. Th... Patrick Plitzner
05:41 PM bug #6388 (Closed): Duplicate entry exception when adding types to a taxon
Steps to reproduce:
1. Open any species
1. Add a new type designation in the details view
1. Click "browse" to c...
Patrick Plitzner
05:02 PM Revision c8a87de9 (cdmlib-apps): adapt pom version in cdmlib-app
Andreas Müller
05:02 PM Revision ac5fb7af (cdmlib-apps): ref #6369 adapt existing occurrences of interface to removed gen...
Andreas Müller
04:59 PM feature request #6369 (Resolved): Create interfaces for TaxonName types
Applied in changeset commit:cdmlib|3786c4c9973a9249a6680a31501dfea67c47309d. Andreas Müller
04:59 PM Revision 3d58795e (cdmlib): ref #6369 adapt existing occurrences of interface to removed generics
Andreas Müller
04:58 PM Revision 8fd3a2d7 (cdmlib): ref #6369 remove generics from interfaces
Andreas Müller
04:57 PM Revision 3786c4c9 (cdmlib): fix #6369 add interface for all names
Andreas Müller
04:56 PM Revision 47341693 (cdmlib): ref #6369 add IViralName interface
Andreas Müller
04:27 PM Revision 8fd7eb1d (cdmlib): ref #6369 add remaining interfaces
Andreas Müller
04:21 PM feature request #6387 (New): [Rule] Rank rule for CultivarPlantNames
The only possible ranks for cultivars are CULTIVAR, GREX, CONVAR, CULTIVAR_GROUP, GRAFT_CHIMAERA or DENOMINATION_CLAS... Andreas Müller
04:00 PM Revision 951f636d (cdmlib): ref #6362 removed some NonViralName occurrences (make it compiling a...
Andreas Müller
04:00 PM Revision dea59ff1 (cdmlib): cleanup
Andreas Müller
04:00 PM Revision 624126f1 (cdmlib): ref #6369 Add interfaces for TaxonNameBase and NonViralName
Andreas Müller
04:00 PM Revision a4c9dfc9 (cdmlib): ref #6362 removed some NonViralName occurrences (non-compiling as ch...
Andreas Müller
03:10 PM Revision f0fba95f (taxeditor): (java)doc
Andreas Müller
02:26 PM Revision 6892d459 (taxeditor): ref #6360 and ref #6369 update cached model in taxeditor
Andreas Müller
12:00 PM Revision f5ed8961 (taxeditor): manually set version numbers
Katja Luther

01/25/2017

06:10 PM bug #6382 (Resolved): option to supply user credentials in the admin setting for the freetext ind...
Applied in changeset commit:cdmlib|ac32d8ec395f8a22d3c787092f25c54a70ec0b2c. Andreas Kohlbecker
04:40 PM bug #6382 (In Progress): option to supply user credentials in the admin setting for the freetext ...
The modifed URLs in the trigger links do not work. It seems as if the Jquery ajax function in cdmlib-remote-webapp/sr... Andreas Kohlbecker
06:09 PM Revision ac32d8ec (cdmlib): fix #6382 proper handling of authentication in cdm_ws_progress.js
Andreas Kohlbecker
04:32 PM bug #6373 (Closed): LIE during request to /portal/descriptionElement/byTaxon
works! Andreas Kohlbecker
02:52 PM Revision 36fa4de1 (taxeditor): manually setting the project and cdmlib version to 4.6.0-SNAPSHOT
Andreas Kohlbecker
02:04 PM bug #6386 (Worksforme): wrong taxeditor develop branch version after taxeditor-HFX-*
The problem was actually introduced by a manual merge of the develop branch into the hotfix branch commit:taxeditor|c... Andreas Kohlbecker
01:05 PM bug #6386 (Worksforme): wrong taxeditor develop branch version after taxeditor-HFX-*
After running the taxeditor-HFX-* jobs the version in the develop branch is set to the release version. it should how... Andreas Kohlbecker
12:54 PM Revision c683d6af (cdmlib): Revert "Revert "ref #6369 Add interfaces for TaxonNameBase and NonVir...
This reverts commit 949c09b142f2806539e3fb399bef980d3e17e293. Andreas Kohlbecker
12:54 PM Revision 682caf2f (cdmlib): Revert "Revert "fix #6360 moved all NonViralName functionality to Tax...
This reverts commit 9b9d0a956d78e3aec1024bc0a5fa33f33e5b33aa. Andreas Kohlbecker
12:51 PM Revision edc792d8 (cdmlib): minor
Andreas Müller
12:45 PM bug #6088: New reproducable multiple representations exception for name relationships
Hallo,
das Problem beim Speichern von Name Relationships ( s.u. "Multiple representations of the same entity") schei...
Katja Luther
12:45 PM bug #6088: New reproducable multiple representations exception for name relationships
Hallo,
das erste der letzten Mittwoch gemeldeten Probleme habe ich nun auch in einem zweiten Fall, scheint also ni...
Katja Luther
12:42 PM bug #6385: Specimen Editor should handle new search same as bulk editor
Katja, could you please add the existing similar ticket for the bulk editor as a related ticket? Andreas Müller
12:41 PM bug #6385 (Closed): Specimen Editor should handle new search same as bulk editor
For the bulk editors we realised that a new search should trigger a completely new session. Which also includes askin... Andreas Müller
11:05 AM Revision f13242a4 (cdm-server): Merge branch 'hotfix/4.5.1' into develop
jenkins
11:05 AM Revision ccdba3a0 (cdm-server): Merge branch 'hotfix/4.5.1'
jenkins
11:05 AM Revision 14050181 (cdm-server): jenkins: setting project version to 4.5.1
jenkins
10:50 AM Revision 4aa72253 (cdm-dataportal): Merge tag '4.5.2' into develop
tagging hotfix release 4.5.2 Andreas Kohlbecker
10:49 AM Revision 91f92da0 (cdm-dataportal): Merge branch 'hotfix/4.5.2'
Andreas Kohlbecker
10:33 AM feature request #6187: [DISCUSS] Ask W.Greuter about "type providing name"
AM: In anderem Zusammenhang habe ich dich so verstanden, dass es pro homotypische Gruppe immer nur einen type providi... Andreas Müller
10:32 AM bug #6136: Implement type providing name in homotypical group
AM: In anderem Zusammenhang habe ich dich so verstanden, dass es pro homotypische Gruppe immer nur einen type providi... Andreas Müller
10:23 AM Revision 5d2ae3d8 (taxeditor): Merge branch 'hotfix/4.5.1' into develop
jenkins
10:23 AM Revision 8bbae356 (taxeditor): Merge branch 'hotfix/4.5.1'
jenkins
10:19 AM bug #6383: fatal error on git push: The remote end hung up unexpectedly
After the above modification the cdm-webapp-HFX-FINISH job was running successfully. This could mean that the probelm... Andreas Kohlbecker
10:13 AM bug #6383 (In Progress): fatal error on git push: The remote end hung up unexpectedly
Andreas Kohlbecker
10:12 AM bug #6383: fatal error on git push: The remote end hung up unexpectedly
attempting to ssh into the server as `ssh git@dev.e-taxonomy.eu` raises a error message:
~~~
...
Last login: Fri...
Andreas Kohlbecker
09:53 AM bug #6383 (Rejected): fatal error on git push: The remote end hung up unexpectedly
This frequently breaks jobs in the release pipeline and always causes the affected job to fail. It also occurs in oth... Andreas Kohlbecker
10:14 AM Revision 2f602d46 (cdm-webapp): Merge branch 'hotfix/4.5.1' into develop
jenkins
10:14 AM Revision 20cdac33 (cdm-webapp): Merge branch 'hotfix/4.5.1'
jenkins
10:14 AM Revision 196034e6 (cdm-webapp): jenkins: setting project version to 4.5.1
jenkins
09:47 AM Revision f66eceb1 (cdm-webapp): jenkins: setting project version to 4.5.1
jenkins
09:43 AM Revision 0a601525 (cdm-webapp): jenkins: setting project version to 4.5.1
jenkins
09:41 AM Revision a8b76356 (cdm-webapp): jenkins: setting project version to 4.5.1
jenkins
09:35 AM Revision 23fe0a9b (cdm-webapp): jenkins: setting project version to 4.5.1
jenkins
09:07 AM Revision 1f172a8f (taxeditor): remove private source path
Katja Luther

01/24/2017

05:36 PM Revision 5d6f6634 (cdm-webapp): Merge branch 'hotfix/4.5.1'
jenkins
05:34 PM Revision 56e7c172 (cdm-vaadin): Merge branch 'hotfix/4.5.1' into develop
jenkins
05:34 PM Revision 539a958a (cdm-vaadin): Merge branch 'hotfix/4.5.1'
jenkins
05:34 PM Revision c0dbf9c5 (cdm-vaadin): jenkins: setting project version to 4.5.1
jenkins
04:18 PM Revision 3ae260cf (cdm-vaadin): Merge branch 'hotfix/4.5.1' into develop
jenkins
04:18 PM Revision 8ad6bb2a (cdm-vaadin): Merge branch 'hotfix/4.5.1'
jenkins
04:09 PM Revision 9c45d4e5 (cdmlib): Updating develop poms back to pre merge state
jenkins
04:09 PM Revision 66ea84af (cdmlib): Updating develop poms to hotfix version to avoid merge conflicts
jenkins
04:09 PM Revision bf63ed3d (cdmlib): Merge branch 'master' into develop
jenkins
04:09 PM Revision 410d763f (cdmlib): Merge branch 'hotfix/4.5.1'
jenkins
04:03 PM Revision 5ab799e7 (cdm-server): updating poms for 4.5.1 branch with snapshot versions
jenkins
04:02 PM Revision c84fdad1 (taxeditor): Merge branch 'develop' into hotfix/4.5.1
Conflicts:
eu.etaxonomy.taxeditor.application/META-INF/MANIFEST.MF
eu.etaxonomy.taxeditor.application/pom.xml
eu.e...
Andreas Kohlbecker
03:54 PM Revision 8eaf1aa8 (cdm-webapp): jenkins bumping cdmlib.version to 4.5.1 cdm.vaadin.version to 4.5.1
jenkins
03:53 PM Revision f3cacdad (cdm-webapp): updating poms for 4.5.1 branch with snapshot versions
jenkins
03:53 PM Revision 6a2d72d8 (cdm-vaadin): jenkins bumping cdmlib.version to 4.5.1
jenkins
03:53 PM Revision dc5c80e1 (cdm-vaadin): updating poms for 4.5.1 branch with snapshot versions
jenkins
03:52 PM Revision eb48a4b2 (taxeditor): Updated version in pom / project files to taxeditor version : 4.5....
jenkins
03:52 PM Revision 30c31800 (cdmlib): updating poms for branch'hotfix/4.5.1' with non-snapshot versions
jenkins
03:47 PM bug #6382 (Resolved): option to supply user credentials in the admin setting for the freetext ind...
Applied in changeset commit:cdm-dataportal|c9b3fcf51a4ce188734069f350964233b0bd7aee. Andreas Kohlbecker
03:46 PM bug #6382 (Closed): option to supply user credentials in the admin setting for the freetext index...
The credentials must not be stored in the settings Andreas Kohlbecker
03:47 PM Revision c9b3fcf5 (cdm-dataportal): fix #6382 option to supply user credentials in the admin sett...
Andreas Kohlbecker
02:44 PM bug #6380: typedesignations missing in homotypic group
>A solution would be to use the existing >`eu.etaxonomy.cdm.persistence.dao.name.IHomotypicalGroupDao.getTypeDesignat... Andreas Müller
12:47 PM bug #6380 (New): typedesignations missing in homotypic group
This issue seems to occur only in special cases but point out a general problem with the way the typedesignations are... Andreas Kohlbecker
02:35 PM bug #6381 (Closed): Specimen titleCache should include barcode or catalogue number if accession n...
Andreas Müller
02:27 PM bug #6376 (Resolved): NPE when deduplicating agent
Applied in changeset commit:taxeditor|fa70a2efe1035f9f977cc24552dfbe07b8703ab9. Katja Luther
09:40 AM bug #6376 (Closed): NPE when deduplicating agent
Hi,
folgende Fehlermeldung kam eben beim Deduplizieren.
schöne Grüße, Nadja
~~~
login : n.korotkova
editor...
Andreas Müller
02:10 PM Revision fa70a2ef (taxeditor): fix #6376: remove markAsDelete for merged items in bulk editor
Katja Luther
01:41 PM Revision be193783 (cdmlib): Merge branch 'develop' into hotfix/4.5.1
Andreas Kohlbecker
01:39 PM Revision 345e6049 (cdmlib): updating poms for 4.5.1 branch with snapshot versions
jenkins
01:38 PM Revision 9b9d0a95 (cdmlib): Revert "fix #6360 moved all NonViralName functionality to TaxonNameBase"
This reverts commit 7d8c96134bda3c11d053df2e8e5d03f32a500ee3. Andreas Kohlbecker
01:38 PM Revision 949c09b1 (cdmlib): Revert "ref #6369 Add interfaces for TaxonNameBase and NonViralName"
This reverts commit 1e42628a4c24232f9b03a2a1e508d7cd79e0e0ba. Andreas Kohlbecker
12:20 PM bug #6379 (Worksforme): specimens of lectotypes not shown in portal

Cichorieae: The Name *Hypochaeris achyrophorus* has a Lectotype with a specimen: Herb. Clifford: 385, Hypochaeris 1...
Andreas Kohlbecker
10:20 AM bug #6378 (New): Check if PlinianCore is relevant for us
https://github.com/tdwg/PlinianCore/wiki
Plinian Core
Andreas Müller
09:55 AM task #6377 (New): Add DAFOR vocabulary for organismQuantityType
Dominant-
Abundant-Frequent-Occasional-Rare
====
For abundance you could use organismQuantity in conjunction w...
Andreas Müller
09:30 AM bug #6375 (Closed): footnotes on sensu references must not be prefixed with 'sensu'
Walter wrote:
http://portal.cybertaxonomy.org/flora-cuba/cdm_dataportal/taxon/c40f3ad5-e921-4d34-b8e4-f7235d3db73e...
Andreas Kohlbecker
08:49 AM bug #6255 (Resolved): jenkins job cdm-webapp-HFX-FINISH fails due to merge conflict
I created a new job based on taxeditor-HFX-FINISH, the old one is preserved as *cdm-webapp-HFX-FINISH (BACKUP)* which... Andreas Kohlbecker

01/23/2017

04:39 PM Revision 3443cc03 (cdm-dataportal): ref #6374 fixing hard-coded uses feature uuid
Andreas Kohlbecker
04:37 PM bug #6374 (Closed): Uses no longer shown in palmweb portal broken

*Iriartea deltoidea*:
http://edit.dev/d7/palmae/cdm_dataportal/taxon/ce870eca-0422-4a3c-b849-0f5ca0370b1f
Andreas Kohlbecker
04:26 PM Revision 28ec5a3e (cdm-dataportal): avoiding error in feature block generation for bibliography a...
Andreas Kohlbecker
03:24 PM Revision 1d4ed7b6 (cdmlib): code cleaning
Katja Luther
03:19 PM Revision dee9eacd (cdmlib): Fix potential NPE when there is a facade with no derived unit
Patrick Plitzner
03:19 PM Revision 128891d7 (taxeditor): Correctly set default values for EntitySelectionElements
Patrick Plitzner
02:15 PM bug #6373 (Resolved): LIE during request to /portal/descriptionElement/byTaxon
Applied in changeset commit:cdmlib|be36c37f254cc5d6f7b6297547714fc8121e2017. Andreas Kohlbecker
01:31 PM bug #6373 (Closed): LIE during request to /portal/descriptionElement/byTaxon
~~~
Caused by: net.sf.json.JSONException: org.hibernate.LazyInitializationException: failed to lazily initialize a c...
Andreas Kohlbecker
02:15 PM Revision be36c37f (cdmlib): fix #6373 fixing MediaAutoInitializer
Andreas Kohlbecker
01:53 PM Revision c616b466 (cdmlib): revert last minor change in misapplied name search
Katja Luther
01:35 PM Revision bf021c7c (cdmlib): minor
Katja Luther
01:03 PM Revision a6f0466b (cdmlib): fix tests
Katja Luther
12:58 PM Revision 87bd41bc (taxeditor): Fix LibrAlign dependencies
Patrick Plitzner
12:49 PM Revision 7f98f132 (taxeditor): Merge branch 'develop' into LibrAlign
Patrick Plitzner
12:26 PM Revision 4e6f5b53 (cdmlib): ref #6296 confirming that modified expectations are correct, removing...
Andreas Kohlbecker
12:06 PM bug #6296 (Resolved): Simple search for common names returns duplicates
Applied in changeset commit:cdmlib|177a283a6184b5ca5ab3344042317f1f96db3b31. Katja Luther
10:41 AM bug #6296: Simple search for common names returns duplicates
There are at least two other problems. I extended the according service tests. You will find in the commit:cdmlib|cc9... Andreas Kohlbecker
12:06 PM Revision 177a283a (cdmlib): fix #6296: fix the parameter settings in search queries
Katja Luther
11:43 AM bug #6372 (Closed): NPE when using ShowView - Datasource
Hallo,
bei der Suche nach der Update-Einstellung habe ich Window-ShowView-Datasource gewählt und u.a. Fehler bekomme...
Andreas Müller
11:28 AM Revision 4c7f8868 (taxeditor): ref #5488 Do not abbreviate terms by default
Patrick Plitzner
10:46 AM bug #6215 (Closed): NPE when opening preferences with no DB connection
looks fine Andreas Müller
10:37 AM bug #6371 (New): Data-Refresh problem when exporting consensus file
Another current problem related to this discussion in #5722 would be the following use case:
1) Open an existing s...
Patrick Plitzner
09:21 AM Revision 1b6c7edf (cdmlib): fixing createTestData - applying manual additions from xml dataset
Andreas Kohlbecker
09:21 AM Revision cc95089b (cdmlib): ref #6296 more tests for findByTaxaAndName
Andreas Kohlbecker
09:21 AM Revision 083968cb (cdmlib): minor refactoring of TaxonServiceSearchTest
Andreas Kohlbecker
09:21 AM Revision 6eac8d14 (cdmlib): splitting TaxonService search tests for freetext and standard search ...
Andreas Kohlbecker

01/21/2017

01:45 PM Revision 1e42628a (cdmlib): ref #6369 Add interfaces for TaxonNameBase and NonViralName
Andreas Müller
12:28 PM task #6370 (Rejected): Remaining issues to merge all TaxonNameBase subclasses
do all remaining tasks which are not handled by a subtask ticket yet. Andreas Müller
12:19 PM task #6362: Remove occurrence of NonViralName in code
replace with interface were possible Andreas Müller
11:53 AM task #6362 (Closed): Remove occurrence of NonViralName in code
in cdmlib, taxeditor, cdmlib-app, vaadin, ... Andreas Müller
12:16 PM feature request #6369 (Closed): Create interfaces for TaxonName types
Andreas Müller
12:15 PM feature request #6368 (Closed): Merge all TaxonNameBase classes, remove DTYPE, rename table
Andreas Müller
12:09 PM feature request #6367 (Closed): Make NomenclaturalCode an attribute ("type") of TaxonNameBase
Andreas Müller
12:06 PM task #6366 (Closed): Merge cultivar names into TaxonNameBase
by moving all functionality up, replacing all occurrences of CultivarName in code, adapting cache strategies and writ... Andreas Müller
12:02 PM bug #6365 (Closed): Merge botanical and zoological names into TaxonNameBase
by moving all functionality up, replacing all occurrences of BotanicalName and ZoologicalName in code, adapting cache... Andreas Müller
11:58 AM task #6364 (Closed): Merge viral names and bacterial names into TaxonNameBase
by moving all functionality up, replacing all occurrences of ViralName in code, adapting cache strategies and writing... Andreas Müller
11:56 AM feature request #6363 (Closed): Implement validation rules for all names according to their code
to fulfill the requirements for the parent ticket #6361.
First implement as Level1 rules. Later we may reduce this.
Andreas Müller
11:51 AM task #6360 (Resolved): Move NonViralName functionality to TaxonNameBase
Andreas Müller
11:50 AM task #6360 (New): Move NonViralName functionality to TaxonNameBase
Andreas Müller
11:28 AM task #6360 (Resolved): Move NonViralName functionality to TaxonNameBase
Applied in changeset commit:cdmlib|7d8c96134bda3c11d053df2e8e5d03f32a500ee3. Andreas Müller
11:11 AM task #6360 (Closed): Move NonViralName functionality to TaxonNameBase
To prepare merging of NonViralName and TaxonNameBase Andreas Müller
11:49 AM feature request #6361 (Closed): [MASTER] Merge all TaxonName classes into 1 class
This gives more flexibility to change name types and reduces class casting overheads and exceptions. At the same time... Andreas Müller
11:28 AM Revision 7d8c9613 (cdmlib): fix #6360 moved all NonViralName functionality to TaxonNameBase
Andreas Müller

01/20/2017

08:01 PM Revision 0a706e80 (cdm-dataportal): solving scrollTo problems in taxontree
Andreas Kohlbecker
05:07 PM task #2501 (Closed): Remove redundant SDD import class
Andreas Müller
05:06 PM task #2501 (Resolved): Remove redundant SDD import class
Applied in changeset commit:cdmlib|6a12debb17f56a4b440d71f3f2ce06ad56bb8945. Andreas Müller
05:06 PM Revision 6a12debb (cdmlib): fix #2501 remove redundant SDD import class
Andreas Müller
05:04 PM Revision 69222e4e (cdmlib): minor
Andreas Müller
02:32 PM bug #6299: Error when deleting reference in bulk editor
please have a look if it works now as expected Katja Luther
02:30 PM bug #6359 (New): Remaining issues secundum for subtrees
Open issue(s):
* fill UpdateResult correctly
* add progress monitor
* handle large subtrees in partitions
Andreas Müller
02:28 PM bug #6358 (New): feature block ids must not be language dependant
The feature block ids are build using the label of the according feature type term. When terms are translated the id ... Andreas Kohlbecker
02:27 PM feature request #4246 (Closed): Allow inserting a new node at the beginning or somewhere else in ...
moved the two possiblities of add a node into one menu item Katja Luther
02:26 PM bug #6283 (Closed): Exceptions when editing polytomous key
seems to be fine Katja Luther
02:26 PM feature request #4766 (Closed): Repair Methods for the cdm instance
Katja Luther
01:31 PM feature request #4766 (Feedback): Repair Methods for the cdm instance
This works fine and is a very nice feature.
Some minor issues:
* Is there a reason why you have implemented the...
Andreas Müller
02:25 PM feature request #6357 (New): Repair methods improvement
follow up issues to #4766
Is there a reason why you have implemented the CacheUpdater only for 3 classes and n...
Katja Luther
02:16 PM bug #6244 (Closed): Sortindex problems in complex operations like swap synonym and accepted and o...
As this is lot of work to test but we did not get any complaints anymore I close without final testing. Also we do ha... Andreas Müller
02:08 PM bug #6356 (New): taxontree sort order as in editor
The classification browser (taxontree) should be using the same sort order as the taxon navigator in the editor.
...
Andreas Kohlbecker
02:08 PM bug #6355: Improve message if server is down
This is NOT a duplicate for related tickets like #6209 but a separate issue. Andreas Müller
01:53 PM bug #6355 (Duplicate): Improve message if server is down
If the remote server is down/not started one gets a very long message (see attachement).
The message should be sim...
Andreas Müller
02:07 PM feature request #5839: Improve error message when server can't be reached
Can we close this ticket? If it is a pure duplicate we should (and remove target version). Andreas Müller
02:06 PM feature request #5839: Improve error message when server can't be reached
Andreas Müller wrote:
> I don't remember how to invoke this message in the moment. But I have seen it recently and I...
Andreas Müller
02:03 PM feature request #5839 (New): Improve error message when server can't be reached
Andreas Müller
02:00 PM feature request #5839 (Closed): Improve error message when server can't be reached
I don't remember how to invoke this message in the moment. But I have seen it recently and I think we can close this ... Andreas Müller
02:00 PM bug #6209 (Closed): NPE in DatasourceView
I don't remember how to invoke this message in the moment. But I have seen it recently and I think we can close this ... Andreas Müller
01:46 PM Revision 088873e9 (cdmlib): ref #6354 additinonal test for non phrase queries
Andreas Kohlbecker
01:40 PM bug #6354 (Resolved): Advanced search: non phrase search with wildcard broken
Applied in changeset commit:cdmlib|d93004c1d8290a60779c3731a33ba3c46b062ec9. Andreas Kohlbecker
01:34 PM bug #6354 (Closed): Advanced search: non phrase search with wildcard broken
Example search string: `Abi*`
this is a regression introduced by #4223
Andreas Kohlbecker
01:40 PM Revision d93004c1 (cdmlib): fix #6354 non phrase search with wildcard using the standart QueryParser
Andreas Kohlbecker
01:29 PM bug #6353 (New): Create progress monitors for imports and other long running tasks
... like CacheUpdater or sortindex updater Andreas Müller
01:16 PM Revision fde0f33a (taxeditor): LibrAlign dependency version updated.
Ben Stöver
01:02 PM bug #6296 (In Progress): Simple search for common names returns duplicates
bugs are fixed and tests are added Katja Luther
01:01 PM bug #6296 (Resolved): Simple search for common names returns duplicates
Applied in changeset commit:cdmlib|c4f7a205397788e29a5bb8a00efc87eb41322cab. Katja Luther
11:14 AM bug #6296: Simple search for common names returns duplicates
Another broken search request:
http://api.cybertaxonomy.org/flora_cuba/portal/taxon/find.json?doTaxaByCommonNames=...
Andreas Kohlbecker
01:01 PM Revision c4f7a205 (cdmlib): fix #6296: fix problems for simple search
Katja Luther
11:58 AM bug #6274 (Closed): add update of childrenCount cache in repair method
works fine Andreas Müller
11:47 AM feature request #6352 (New): Add Transmission Engine trigger to Admin menu
From the Admin menu we can now trigger sortindex refresh and cache update.
It would be nice to have a functionalit...
Andreas Müller
11:01 AM bug #2939 (In Progress): ehcache diskStore conflict?
Andreas Kohlbecker
10:59 AM bug #2939: ehcache diskStore conflict?
latest location of the according documentation: http://www.ehcache.org/generated/2.10.3/html/ehc-all/#page/Ehcache_Do... Andreas Kohlbecker
10:51 AM feature request #4490 (Resolved): Make the label of the taxon page tabs customizable for portal a...
The menu cache is now refreshed automatically. Andreas Kohlbecker
10:51 AM Revision 93115722 (cdm-dataportal): ref #4490 automatic menu cache refresh after tab label changes
Andreas Kohlbecker
10:47 AM task #6158 (Feedback): Update EDIT documentation from svn to git
At most places it is updated. I found some additional issues:
* dataportal: link to SourceRepository is broken
* ...
Andreas Müller
10:39 AM Revision 69d02d97 (taxeditor): check for id==0 before try to delete the media
Katja Luther
10:28 AM feature request #3465 (Closed): Function to copy secundum reference of a given taxon node to all ...
looks fine Katja Luther
10:13 AM Revision 0fc610dc (cdmlib): add test for different search combinations
Katja Luther
09:24 AM Revision 7304d345 (cdmlib): fixed copy paste error for common name search
Katja Luther

01/19/2017

11:23 PM feature request #5714: In Original Source Type dropdown show Primary Taxonomic Source first
Andreas Müller wrote:
> ... Also "Other" is not in the expected order.
This is still an open issue, see descripti...
Andreas Müller
11:00 PM feature request #4490 (Feedback): Make the label of the taxon page tabs customizable for portal a...
I switched it on for Campanula and Mexico Rubiaceae.
Worked for Rubiaceae after a couple of refreshs. For Campanul...
Andreas Müller
06:04 PM bug #6349 (Resolved): Fix media description handling
Applied in changeset commit:cdm-dataportal|09e628ea8e2c8c2dac8e2b9d6e7d532b1974e020. Andreas Kohlbecker
04:29 PM bug #6349 (Closed): Fix media description handling
Since version 4.5 Media.description is shown in image galleries and on media pages.
Problem: a separator is missing ...
Andreas Müller
06:04 PM Revision 95733a84 (cdm-dataportal): Merge tag '4.5.1' into develop
hot-fix release 4.5.1 Andreas Kohlbecker
06:04 PM Revision 19994453 (cdm-dataportal): Merge branch 'hotfix/4.5.1'
Andreas Kohlbecker
06:03 PM Revision 09e628ea (cdm-dataportal): fix #6349 media description separate from title
Andreas Kohlbecker
05:53 PM Revision 67a5cafa (cdm-dataportal): ref #4223 dynamically added phrase search parentheses must no...
Andreas Kohlbecker
05:49 PM Revision 38753115 (cdm-dataportal): classification search filter was no longer stored in the session
Andreas Kohlbecker
05:30 PM bug #6248 (Closed): allow machine clients to access /manage/* OAuth2 protected web services
This perfectly works, the `managing-users.properties` are all edited so that they have an according user.
Andreas Kohlbecker
05:28 PM feature request #6351 (Closed): jenkins cdmserver-index-job.groovy supports http basic authentic...
the [cdmserver-index-job.groovy](http://160.45.63.176/jenkins/scriptler/editScript?id=cdmserver-index-job.groovy) nee... Andreas Kohlbecker
04:55 PM bug #6259 (Closed): Media page problems with multiple media representations
Seems to be fixed. Maybe we can improve the layout one day. Andreas Müller
04:51 PM bug #6350 (New): Advanced search areas show empty brackets if idInVocabulary is not given
e.g. for Salvador areas Andreas Müller
04:49 PM bug #6260 (Closed): media page: rights stored in the cdm are not displayed
fixed Andreas Müller
04:48 PM feature request #6301 (Closed): Display of sources for images
Given that there is the follow up ticket this ticket can be closed. Andreas Müller
04:12 PM feature request #6288 (Closed): harmonize CommonName feature block elements
Andreas Kohlbecker
04:07 PM bug #2957 (Closed): running maven site:site for Taxonomic Editor fails
Andreas Kohlbecker
04:01 PM feature request #6278 (Closed): add sec reference as class attribute to all taxon markup
Andreas Kohlbecker
03:47 PM bug #4223 (Closed): Advanced search returns unexpected results
Andreas Kohlbecker
03:46 PM bug #6323 (Closed): LIE during request to name_catalogue/taxon.json
Andreas Kohlbecker
03:43 PM bug #6317 (Closed): LIE during request to portal/taxon/find.json
Andreas Kohlbecker
03:42 PM bug #6268 (Closed): descriptions missing in media service responses
Andreas Kohlbecker
03:42 PM bug #6261 (Closed): NPE while processing /portal/media/{uuid}/sources in BaseController
Andreas Kohlbecker
03:39 PM feature request #6249 (Closed): better logging strategy
Andreas Kohlbecker
03:33 PM bug #6227 (Closed): LIE during request to derivedUnitFacade/{uuid}/collectingareas
Andreas Kohlbecker
03:29 PM bug #4377 (Closed): LazyInitializationException (LIE) related to Team.teamMembers when calling ...
Andreas Kohlbecker
03:28 PM bug #6296 (In Progress): Simple search for common names returns duplicates
This works now in general but searching only for common names causes an exception:
http://api.cybertaxonomy.org/sa...
Andreas Kohlbecker
02:16 PM bug #6186 (Worksforme): Drupal nodes are created even if Create drupal nodes is off
Andreas Müller
01:37 PM bug #6342 (Closed): Exception when searching for '?' in TaxonNodeSelectionDialog
works fine now Patrick Plitzner
10:35 AM bug #6342 (Resolved): Exception when searching for '?' in TaxonNodeSelectionDialog
Applied in changeset commit:cdmlib|3d654cd328d3f29666636bf5fec391629be47123. Katja Luther
12:57 PM bug #6347 (Closed): Improve layout for navigator sorttype selection
In the preferences for taxon navigator we have sorting as one issue.
We should try to group this with a header "So...
Andreas Müller
12:19 PM Revision 8cd1a7e1 (cdm-server): Merge branch 'release/4.5.0' into develop
jenkins
12:18 PM Revision c6f5d3e2 (cdm-server): updating poms for branch'release/4.5.0' with non-snapshot versions
jenkins
12:18 PM Revision e8935d59 (cdm-webapp): Merge branch 'release/4.5.0' into develop
jenkins
12:17 PM Revision f62bfa60 (cdm-webapp): updating poms for branch'release/4.5.0' with non-snapshot versions
jenkins
12:17 PM Revision 351d7aab (cdm-webapp): jenkins bumping cdmlib.version and cdm.vaadin.version to 4.5.0
jenkins
12:17 PM Revision 20bb34f8 (cdm-vaadin): Merge branch 'release/4.5.0' into develop
jenkins
12:15 PM Revision 17a27847 (cdm-vaadin): updating poms for branch'release/4.5.0' with non-snapshot versions
jenkins
12:15 PM Revision 61cb444a (cdm-vaadin): jenkins bumping cdmlib.version to 4.5.0
jenkins
12:15 PM Revision 33a01a85 (cdm-dataportal): Merge branch 'release/4.5.0' into develop
jenkins
12:15 PM Revision 1722f82f (cdm-dataportal): jenkins merging release branch into master (strategy: theirs)
jenkins
12:15 PM Revision af7ae5e8 (cdm-dataportal): updating poms for branch'release/4.5.0' with non-snapshot ver...
jenkins
12:14 PM Revision 08d303c3 (cdm-dataportal): release-preparation: production level css
jenkins
12:14 PM Revision a338301d (taxeditor): Merge branch 'release/4.5.0' into develop
jenkins
12:14 PM Revision d06f9823 (taxeditor): Merge branch 'release/4.5.0'
jenkins
12:13 PM Revision 264ec9d2 (cdmlib): Updating develop poms back to pre merge state
jenkins
12:13 PM Revision 50d31712 (cdmlib): Merge branch 'master' into develop
jenkins
12:13 PM Revision 0784de46 (cdmlib): updating develop poms to master versions to avoid merge conflicts
jenkins
12:13 PM Revision bd4fc52b (cdmlib): Merge branch 'release/4.5.0'
jenkins
11:56 AM Revision 3b6b3a2e (cdmlib): updating poms for branch'release/4.5.0' with non-snapshot versions
jenkins
11:54 AM Revision 21e2b938 (taxeditor): Updated version in pom / project files to taxeditor version : 4.6....
jenkins
11:54 AM Revision 63b6ac4b (taxeditor): Updated version in pom / project files to taxeditor version : 4.5....
jenkins
11:46 AM Revision 74c7e1e5 (cdm-webapp): jenkins bumping cdmlib.version and cdm.vaadin.version to 4.5.0-SN...
jenkins
11:46 AM Revision de244005 (cdm-webapp): updating poms for 4.6.0-SNAPSHOT development
jenkins
11:46 AM Revision 20b625d5 (cdm-webapp): jenkins bumping cdmlib.version and cdm.vaadin.version to 4.6.0-SN...
jenkins
11:45 AM Revision 66ab25b8 (cdm-dataportal): updating poms for 4.6.0-SNAPSHOT development
jenkins
11:45 AM Revision be4eda17 (cdm-vaadin): jenkins bumping cdmlib.version to 4.5.0-SNAPSHOT
jenkins
11:45 AM Revision 4683974a (cdm-vaadin): updating poms for 4.6.0-SNAPSHOT development
jenkins
11:45 AM Revision ee63a3b0 (cdm-server): updating poms for 4.6.0-SNAPSHOT development
jenkins
11:44 AM Revision 372f5add (cdm-vaadin): jenkins bumping cdmlib.version to 4.6.0-SNAPSHOT
jenkins
11:44 AM Revision 893ee34c (taxeditor): missed to add some selection dialogs with last commit
Katja Luther
11:42 AM Revision 82532813 (cdmlib): updating poms for 4.6.0-SNAPSHOT development
jenkins
10:44 AM feature request #6346 (New): Implement filtering and sorting for specimen table in dataportal
Patrick Plitzner
10:39 AM Revision 235fd63d (taxeditor): fix #6342: fix exception when using ? in selection dialog
Katja Luther
10:35 AM Revision 3d654cd3 (cdmlib): fix #6342: fix exception for ? in selection dialog
Katja Luther
10:26 AM bug #6345 (New): Zooming with mouse wheel resets manually adjusted size of areas in AlignmentEditor
1. Change the size of the different areas (single read, consensus, multi-read)
1. Zoom with CTRL+mouse wheel
1. Siz...
Patrick Plitzner
08:46 AM feature request #6344 (New): Restrict UI for editing molecular data
After a testing session with Norbert we decided to use a very restrictive UI to avoid any synchronization problems. T... Patrick Plitzner

01/18/2017

11:47 PM bug #6343 (In Progress): TermVocabularies of OrderedTerms must be OrderedVocabularies
Andreas Müller
11:46 PM bug #6343 (In Progress): TermVocabularies of OrderedTerms must be OrderedVocabularies
Updatescript for TermVocabularies of OrderedTerms which are not OrderedVocabularies.
See also https://dev.e-taxono...
Andreas Müller
11:39 PM feature request #5474: TermEditor menu should be more structured
Please also add a separator above "Others" Andreas Müller
11:38 PM feature request #5474 (Feedback): TermEditor menu should be more structured
Please use i18n (translations for term types themselves will also be offered soon, there is a ticket). Be aware that ... Andreas Müller
11:35 PM Revision 3f70c8a3 (taxeditor): ref #5474 other -> others
Andreas Müller
11:29 PM feature request #6314: CDM light (csv) export implemented
Katja: Ich habe diese und die vorherige Version auch nochmal unter Y:\BDI\EDIT-Plattform\_Latest Versions\Output Mode... Andreas Müller
11:20 PM Revision e5dfd829 (cdmlib-apps): ref #5974 remove synonymRelationships from BfN Import init strategy
Andreas Müller
11:03 PM bug #6042: Campanula portal TODOS
Can you please adapt (or remove) target version. 4.5 does not seem to be correct. Andreas Müller
06:14 PM bug #6042 (Closed): Campanula portal TODOS
Patrick Plitzner
06:15 PM feature request #6321: Implement parallel loading + progress bar for loading objects into the bul...
Currently we have a warning if more than 500(?) objects are going to be loaded into an bulk editor. Instead we should... Andreas Müller
05:59 PM feature request #5714: In Original Source Type dropdown show Primary Taxonomic Source first
Andreas Müller wrote:
> Have you checked if we can reuse / combine the Comparator developed for #3185?
The other co...
Patrick Plitzner
05:54 PM Revision 1b0d0ec1 (taxeditor): ref #5714 Fix ordering of source types
- order by key instead of message
- always have either taxonomic or media source as first and the other
as second
Patrick Plitzner
04:23 PM bug #6283: Exceptions when editing polytomous key
I am not really sure what to test here because I do not know how to reproduce the problem. I clicked around and added... Patrick Plitzner
04:23 PM Revision 6ed48b2e (taxeditor): ref #6283 Fixed potential NPE for EntitySelectionElement
- refactored constructors to always initialise the clazz variable Patrick Plitzner
04:21 PM bug #6342 (Closed): Exception when searching for '?' in TaxonNodeSelectionDialog
1. In Navigator right-click on a taxon
1. Choose "Move Taxon (with children)"
1. Search for all taxon nodes with '?...
Patrick Plitzner
02:49 PM Revision 9a3af936 (taxeditor): fix #5496 Refactor preference pages to use TermType
Patrick Plitzner
11:08 AM Revision cbb4cfac (taxeditor): TIC dependecy version updated.
Ben Stöver
09:45 AM feature request #5365 (Feedback): Add delete configurator to Media View image gallery
When trying to delete an unsaved, recently created image from an image gallery I get an NPE
~~~
login : admin
ed...
Patrick Plitzner
09:39 AM bug #6334 (Closed): Deleting unsaved TaxonDescription does not work
works fine Patrick Plitzner
09:32 AM bug #6333 (Resolved): add existing media to a taxon description is not persisted
I removed the option to change an existing media element in the DetailsView. Instead We should add the option to add ... Patrick Plitzner
09:28 AM Revision d89cdff1 (taxeditor): ref #6333 Remove framework for exchanging an element in the detail...
- This is against the concept of the DetailsView just showing an
element which you can edit. Changing the element req...
Patrick Plitzner
09:16 AM Revision f5b66699 (taxeditor): ref #6333 Add generic support for entity collection sections to allow
adding existing entities
- this is done by two abstract methods allowAddExisting() and
addExisting()
Patrick Plitzner

01/17/2017

12:32 AM feature request #5922 (Closed): Change order in supplemental data view
Andreas Müller
12:27 AM bug #6341 (New): Show botanical nomenclatural status types not for zoological names
This is a bit more difficult than #5488 as we first need to figure out which botanical status are purely botanical an... Andreas Müller
12:23 AM bug #6340 (Closed): Update script for nomenclatural status types
Until #5488 was solved it was possible to add a zoological nom status to a botanical name in TaxEditor.
Especially f...
Andreas Müller
12:08 AM bug #6307 (Closed): Logfile/exception dialog should show connected datasource
Looks fine now Andreas Müller
11:55 PM feature request #5714: In Original Source Type dropdown show Primary Taxonomic Source first
Have you checked if we can reuse / combine the Comparator developed for #3185? Andreas Müller
11:52 PM feature request #5714: In Original Source Type dropdown show Primary Taxonomic Source first
... Also "Other" is not in the expected order. Andreas Müller
11:51 PM feature request #5714 (Feedback): In Original Source Type dropdown show Primary Taxonomic Source ...
Only Primary Taxonomic Source is on top, but Primary Media Source is not yet second and also no alphabetic ordering o... Andreas Müller
11:42 PM Revision a66eea38 (taxeditor): ref #6307 remove cdmserver/ from contextpath
Andreas Müller
11:29 PM Revision 01840d49 (taxeditor): ref #5922 Change order in supplemental data view (cont.)
Andreas Müller
10:56 PM Revision 4e54c1d9 (cdmlib-apps): Add some Spanish representations to Salvador terms
Andreas Müller
05:48 PM Revision 885af082 (cdmlib): ref #6339 reducing code duplication
Andreas Kohlbecker
05:43 PM Revision 733faa22 (cdmlib): Initialise sample designation to format keys for IdentifiableEntity
Patrick Plitzner
05:38 PM bug #6339 (Closed): frontendBaseUrl parameter not longer working in web services
Andreas Kohlbecker
05:21 PM bug #6339 (Resolved): frontendBaseUrl parameter not longer working in web services
Applied in changeset commit:cdmlib|fcfd1e30ae194d17b3be1bae4b5f09dcbb52eaa0. Andreas Kohlbecker
05:19 PM bug #6339 (In Progress): frontendBaseUrl parameter not longer working in web services
Andreas Kohlbecker
04:27 PM bug #6339 (Closed): frontendBaseUrl parameter not longer working in web services
see #6338 General notes Andreas Kohlbecker
05:21 PM Revision fcfd1e30 (cdmlib): fix #6339 fixing missing respect to the frontendBaseUrl
Andreas Kohlbecker
04:49 PM Revision 1b7ce0af (cdmlib): ref #6248 also protecting /**description/accumulateDistributions
Andreas Kohlbecker
04:36 PM Revision 61d32ca1 (cdmlib): ref #6249 prefixig all logappender with instance (bean) name for Enha...
Andreas Kohlbecker
03:28 PM feature request #6337 (New): simple web ui to trigger the transmission engine distribution
in case #6352 is implemented this issue becomes obsoltete Andreas Kohlbecker
02:50 PM bug #6209 (Resolved): NPE in DatasourceView
Andreas Müller
01:00 PM bug #6209: NPE in DatasourceView
The message is changed and a new ticket for the email of the admin is created (#6335). Katja Luther
02:07 PM bug #6336 (Closed): NPE when deleting recently created media
1. Create new image gallery for a taxon
1. Directly delete the image -> NPE
~~~
!ENTRY eu.etaxonomy.taxeditor.ed...
Patrick Plitzner
01:29 PM bug #6333 (In Progress): add existing media to a taxon description is not persisted
Patrick Plitzner
10:28 AM bug #6333 (Resolved): add existing media to a taxon description is not persisted
when adding an existing media to a taxon description shows up correctly, but after changing the view and come back to... Katja Luther
01:00 PM feature request #6335 (New): Providing the admin email for each server instance somehow
For some issues the edit support is not responsible for the error messages but the server admin of an instance. There... Katja Luther
12:51 PM feature request #4766 (Resolved): Repair Methods for the cdm instance
I added the sortIndex Updater and the cache updater. Please have a look, if everything works or any suggestions for i... Katja Luther
12:44 PM bug #6283 (Resolved): Exceptions when editing polytomous key
Katja Luther
12:44 PM bug #6283: Exceptions when editing polytomous key
I test it again and it works now. Please test, if there are NPE when editing the key. Katja Luther
11:57 AM Revision 9d28ffb6 (taxeditor): minor
Katja Luther
11:56 AM bug #6334 (Resolved): Deleting unsaved TaxonDescription does not work
Applied in changeset commit:taxeditor|1f9fcd90f5cd65d1d848ddeb93531e55dc6b100f. Katja Luther
11:03 AM bug #6334 (Closed): Deleting unsaved TaxonDescription does not work
1. Create new TaxonDescription in FactualData view
1. Delete that TaxonDescription
1. TaxonDescription is still the...
Patrick Plitzner
11:56 AM Revision 1f9fcd90 (taxeditor): fix #6334: unsaved description needs to be removed from the taxon
Katja Luther
11:52 AM Revision 40de894f (taxeditor): add missing changes
Katja Luther
11:46 AM Revision 5291be06 (taxeditor): minor
Katja Luther
11:25 AM bug #6248 (Resolved): allow machine clients to access /manage/* OAuth2 protected web services
Applied in changeset commit:cdmlib|c05f3fc567c3839ded9d89c6c0f81834fe11e1d2. Andreas Kohlbecker
11:09 AM bug #6248: allow machine clients to access /manage/* OAuth2 protected web services
oauth2 with grant type 'client' is not really needed. It would require that the client can authenticate with username... Andreas Kohlbecker
11:25 AM Revision c05f3fc5 (cdmlib): fix #6248 implementing global management users for machine clients
Andreas Kohlbecker
11:12 AM bug #6281: delete synonym with annotations throws exception
same problem, when the synonym has original sources.
~~~ text
login : W.Greuter
editor version : 4.4.1
server :...
Katja Luther
11:10 AM Revision f70049c0 (cdmlib): minor code cleaning
Andreas Kohlbecker
11:00 AM feature request #5365 (Resolved): Add delete configurator to Media View image gallery
Applied in changeset commit:taxeditor|d747b2b97eb8df327a6096e37a9b644cbd950295. Katja Luther
11:00 AM Revision d747b2b9 (taxeditor): fix #5365: add delete configuration to media view
Katja Luther

01/16/2017

12:45 PM Revision a2b0aaba (cdmlib-apps): Merge branch 'master' into noChecklistClone
Patrick Plitzner
12:40 PM Revision 2c298347 (cdmlib-apps): ref #5448 Add new rank "forme"
- did some refactoring and advanced logging Patrick Plitzner
11:19 AM Revision e7788357 (cdmlib): removing unused and misleading method
Andreas Kohlbecker
11:14 AM feature request #6332 (New): cdm-dataportal as oauth2 client of cdm-remote instances
The drupal modules providing oauth2 client functionality:
* [oauth2_client](https://www.drupal.org/project/oauth2_...
Andreas Kohlbecker
10:45 AM Revision b7d5770a (cdmlib): ref #6118 enabling missing httpbasic authentication for oauth secured...
Andreas Kohlbecker
10:08 AM feature request #5365: Add delete configurator to Media View image gallery
Sorry, I added the delete configuration only to the bulk editor. Will add it to the media galery as well, Katja Luther
09:17 AM Revision 981251f1 (cdmlib): cleaning up CdmUtils
- removing usused method
- reducing code duplication
Andreas Kohlbecker

01/13/2017

12:44 AM feature request #5365 (Feedback): Add delete configurator to Media View image gallery
Andreas Müller
02:05 PM feature request #5365: Add delete configurator to Media View image gallery
There is no popup at all when I delete an image from an image gallery. I tried it with an image attached to a taxon i... Patrick Plitzner
05:19 PM bug #6331 (New): Inserting gaps in the AlignmentEditor using the space key does not work anymore
See https://secure.bioinfweb.info/Bugs/Bugzilla/show_bug.cgi?id=153
Workaround: Use the '-' key instead.
Ben Stöver
04:50 PM Revision ae1b83c4 (taxeditor): Removed double reference to TIC in molecular.lib.
Ben Stöver
04:35 PM Revision fff59041 (taxeditor): remove unused bin.include
Patrick Plitzner
04:02 PM Revision 645c77a1 (taxeditor): Saving files before refreshing line endings
Patrick Plitzner
03:33 PM Revision 1c69b0d0 (taxeditor): Merge branch 'develop' into LibrAlign
Patrick Plitzner
03:11 PM Revision 64f25b56 (taxeditor): Alternative versions for build.properties added. Current state set...
Ben Stöver
01:51 PM Revision 6de63659 (taxeditor): ref #5495 always empty details view when there is no active editor
providing a selection Patrick Plitzner
01:33 PM Revision e54b6c76 (taxeditor): pom.xml and MANIFEST.MF updated in molecular.lib.
Ben Stöver
01:27 PM bug #2957 (Resolved): running maven site:site for Taxonomic Editor fails
Andreas Müller
01:23 PM bug #2957: running maven site:site for Taxonomic Editor fails
Andreas Kohlbecker wrote:
> As far as i can see there is no other information from subprojects that needs to be incl...
Patrick Plitzner
11:19 AM bug #2957: running maven site:site for Taxonomic Editor fails
As far as i can see there is no other information from subprojects that needs to be included into the site doc.
Add...
Andreas Kohlbecker
10:28 AM bug #2957 (Feedback): running maven site:site for Taxonomic Editor fails
On my local machine I tried running `mvn site:site` which at first crashed. Then I tried `mvn install` first and then... Patrick Plitzner
01:15 PM feature request #5055 (Closed): Integrate Luna installation instruction into standard installatio...
This has been resolved by fixing #6158 Patrick Plitzner
12:08 PM Revision ef1673ea (taxeditor): Adjustments to project structure changes in JPhyloIO.
Ben Stöver
12:07 PM task #6158 (Resolved): Update EDIT documentation from svn to git
Andreas Müller
10:38 AM task #6158 (Feedback): Update EDIT documentation from svn to git
Patrick Plitzner
10:37 AM task #6158 (Resolved): Update EDIT documentation from svn to git
Andreas Kohlbecker wrote:
> Patrick Plitzner wrote:
> > I updated the documentation of taxeditor and cdmlib (change...
Patrick Plitzner
10:26 AM task #6158 (Feedback): Update EDIT documentation from svn to git
Andreas Müller
09:46 AM task #6158: Update EDIT documentation from svn to git
Patrick Plitzner wrote:
> I updated the documentation of taxeditor and cdmlib (changed only the repository informati...
Andreas Kohlbecker
09:29 AM task #6158: Update EDIT documentation from svn to git
I updated the documentation of taxeditor and cdmlib (changed only the repository information from svn to git here).
...
Patrick Plitzner
09:21 AM task #6158 (Resolved): Update EDIT documentation from svn to git
Applied in changeset commit:taxeditor|8e2a3b6327166e1cd821a6dbeb9df2e2a27f4988. Patrick Plitzner
11:18 AM bug #4223: Advanced search returns unexpected results
Works for me in the Corvids test portal now. Gabriele Dröge
11:10 AM bug #4223: Advanced search returns unexpected results
this issue is fully solved now, please do the review asap. Andreas Kohlbecker
10:25 AM bug #4223 (Resolved): Advanced search returns unexpected results
Applied in changeset commit:cdmlib|5c69d02f232481e02f850bfd10404566a8373e5b. Andreas Kohlbecker
11:08 AM Revision 7d42c393 (cdm-dataportal): solving probelms with search parameters not being remembered
Andreas Kohlbecker
10:49 AM Revision b3d49e6e (cdm-dataportal): ref #4223 lucene based taxon search always as phrase search
Andreas Kohlbecker
10:48 AM Revision 103a1463 (cdm-dataportal): typos and fixing messages
Andreas Kohlbecker
10:25 AM Revision 5c69d02f (cdmlib): fix #4223 using the ComplexPhraseQuery for phrase searches with wildc...
Andreas Kohlbecker
09:26 AM Revision 8b607fc9 (cdmlib): ref #6158 Update source code repository from svn to git
Patrick Plitzner
09:25 AM Revision a2cfd9b1 (taxeditor): ref #6158 Add missing git clone command to doc
Patrick Plitzner
09:21 AM Revision 8e2a3b63 (taxeditor): fix #6158 updated taxeditor installation documentation
Patrick Plitzner

01/12/2017

11:59 PM feature request #5922: Change order in supplemental data view
Extensions still could be moved down (taxeditor|55409937). Markers we can leave were they are for now as this is more... Andreas Müller
11:57 PM Revision 55409937 (taxeditor): fix #5922 Move extensions section down
Andreas Müller
11:56 PM Revision 79be504a (taxeditor): cleanup
Andreas Müller
11:49 PM bug #5698 (Closed): Ampersand (&) is not shown in labels for NameRelationships in details view
seems to work Andreas Müller
10:31 PM bug #4223: Advanced search returns unexpected results
Andreas Kohlbecker wrote:
> Here we are facing two problems:
>
> 1. The portal does not allow to do a phrase sear...
Andreas Kohlbecker
06:50 PM bug #4223: Advanced search returns unexpected results
The `ComplexPhraseQueryParser` is still available in the our current lucene version, so we could give this one a try. Andreas Kohlbecker
06:27 PM bug #4223: Advanced search returns unexpected results
Here we are facing two problems:
1. The portal does not allow to do a phrase search with a query string like `"Gar...
Andreas Kohlbecker
10:28 PM Revision 8bb9f541 (cdm-dataportal): ref #4223 fixing request uri for accepted taxa
solves problem 1) in issue Andreas Kohlbecker
05:58 PM bug #6227 (Resolved): LIE during request to derivedUnitFacade/{uuid}/collectingareas
Applied in changeset commit:cdmlib|5f3efd0eb42e522ee613872715c821753a1d6004. Andreas Kohlbecker
05:58 PM Revision 5f3efd0e (cdmlib): fix #6227 solvig LIE in DerivedUnitFacade webservice
Andreas Kohlbecker
05:44 PM feature request #6301: Display of sources for images
please do the review Andreas Kohlbecker
01:50 PM feature request #6301 (Resolved): Display of sources for images
Applied in changeset commit:cdm-dataportal|0c2b9b9d85abf12805482981dde310fa1b6c1b45. Andreas Kohlbecker
05:36 PM Revision a1493182 (cdm-dataportal): ref #6301 sources as inline elements on media page - bugfix
Andreas Kohlbecker
05:18 PM feature request #6327: Providing the admin email for each server instance somehow
Andreas Müller wrote:
> Do we have an idea who the admin actually is?
> Is it the user "admin" with email stored (o...
Andreas Kohlbecker
04:53 PM feature request #6327: Providing the admin email for each server instance somehow
Do we have an idea who the admin actually is?
Is it the user "admin" with email stored (or not) in the CDM?
Or is...
Andreas Müller
03:30 PM feature request #6327 (New): Providing the admin email for each server instance somehow
sometimes it is useful to give contact informations of the server admin to the user, therefore we need this informati... Katja Luther
05:15 PM bug #6329: improve display of media sources and annotations
Andreas Müller wrote:
> I don't understand why the captions are relevant here sources and annotations are not depend...
Andreas Kohlbecker
04:49 PM bug #6329: improve display of media sources and annotations
I don't understand why the captions are relevant here sources and annotations are not dependent on the captions and t... Andreas Müller
04:29 PM bug #6329: improve display of media sources and annotations
The sources and annotations are displayed differently in the image gallery and media page.
#### A. Gallery
1. S...
Andreas Kohlbecker
04:21 PM bug #6329 (New): improve display of media sources and annotations
follow up of #6301
The sources and annotations are displayed differently in the image gallery and media page.
#...
Andreas Kohlbecker
04:50 PM feature request #5671 (Resolved): Name selection should not allow self referencing name relations...
Applied in changeset commit:taxeditor|c1c83a38d07bdc4286ce7abb8b30789d0c32e637. Katja Luther
04:50 PM Revision c1c83a38 (taxeditor): fix #5671: add filter element for selection dialog
Katja Luther
04:49 PM Revision f79d32d6 (cdm-dataportal): ref #6301 sources as inline elements on media page
Andreas Kohlbecker
04:44 PM feature request #5365 (Resolved): Add delete configurator to Media View image gallery
Andreas Müller
02:46 PM feature request #5365: Add delete configurator to Media View image gallery
This works now. Please have a look. I have to find the changeset... Katja Luther
04:28 PM bug #6330 (Closed): Defined sort order for Mediarepresentations
If multiple MediaRepresentations are available for one Media the order is arbitrary as it has set semantics.
This ...
Andreas Müller
04:12 PM bug #6328 (New): Warn about available text in other languages if multi-language support disabled
If multi language support is disabled a Media.description is not shown if it is defined in another language than the ... Andreas Müller
01:57 PM Revision 028c6d17 (cdm-dataportal): ref #6301 removing stray characters
Andreas Kohlbecker
01:52 PM Revision 2b7ff891 (cdmlib): ref #6301 extending media objects returned by MediaListController
- adding sources Andreas Kohlbecker
01:50 PM Revision 0c2b9b9d (cdm-dataportal): fix #6301 implementing display of sources and annotations for...
Andreas Kohlbecker
11:28 AM bug #6326: Login from taxeditor not possible after logging out of vaadin distribution editor
Andreas Kohlbecker wrote:
> A problem in the session handling? Maybe solved when #5285 is completed?
>
> Are ther...
Patrick Plitzner
10:50 AM bug #6326: Login from taxeditor not possible after logging out of vaadin distribution editor
A problem in the session handling? Maybe solved when #5285 is completed?
Are there any observable abnormality in t...
Andreas Kohlbecker
10:01 AM bug #6326 (Worksforme): Login from taxeditor not possible after logging out of vaadin distributio...
I tested this with flora cuba on the test server (http://test.e-taxonomy.eu/cdmserver/flora_cuba/app/distribution)
...
Patrick Plitzner

01/11/2017

04:17 PM Revision 2a3b0c8e (cdm-dataportal): turning useless media related theme-functions into compose or...
moving functions to includes file Andreas Kohlbecker
04:14 PM Revision 91b4a452 (cdm-dataportal): missing deafult in media related compose function fixed
Andreas Kohlbecker
03:54 PM Revision a9815578 (cdm-dataportal): turning useless media related theme-functions into compose or...
Andreas Kohlbecker
02:24 PM bug #6325 (New): Handling of specimen imported via biocase with missing nomenclatural code
for ABCD import the parsing and assignement to an existing name works fine if the identification contains the nomenc... Katja Luther
02:14 PM bug #4377 (Resolved): LazyInitializationException (LIE) related to Team.teamMembers when calling...
Applied in changeset commit:cdmlib|8e6fba800484afd4d9570c39f630b47e49579624. Andreas Kohlbecker
02:14 PM Revision 8e6fba80 (cdmlib): fix #4377 adding missing bean init path missing after ref #5974
Andreas Kohlbecker
01:50 PM feature request #6076: Specimen search should work on observations
The specimen search works now on all types of specimen. Find the commit. Katja Luther
12:44 PM bug #6323 (Resolved): LIE during request to name_catalogue/taxon.json
Applied in changeset commit:cdmlib|04a88dbc1f00111e4cb3dfee0b1d940dffdb5bf6. Andreas Kohlbecker
12:09 PM bug #6323: LIE during request to name_catalogue/taxon.json
This bug has been caused by the changes applied through #5974 Andreas Kohlbecker
09:45 AM bug #6323 (Closed): LIE during request to name_catalogue/taxon.json

http://api.cybertaxonomy.org/col/name_catalogue/taxon.json?taxonUuid=19338fc3-dbd5-4bda-8cb3-8da76151f8c4
~~~
C...
Andreas Kohlbecker
12:44 PM Revision 04a88dbc (cdmlib): fix #6323 adding missing bean init path missing after ref #5974
Andreas Kohlbecker
12:44 PM Revision 2440f0fe (cdmlib): ref #6324 adding FIXME comment
Andreas Kohlbecker
12:12 PM bug #6324 (In Progress): fix dozer mapping after removal of synonym relations
the the dozer mapping file `/cdmlib-remote/src/main/resources/eu/etaxonomy/cdm/remote/dto/tdwg/mappings-deep.xml` a p... Andreas Kohlbecker
08:12 AM Revision 2e82a602 (cdm-dataportal): ref #6320 Add page size to settings for compressed specimen t...
Patrick Plitzner

01/10/2017

04:45 PM Revision a5a9fcde (taxeditor): ref #6320 show pherogram title cache in single read label
Patrick Plitzner
04:44 PM Revision fe4c0713 (cdmlib): ref #6320 Add pherogram title cache to format keys
Patrick Plitzner
04:25 PM Revision 799a6449 (taxeditor): Fix icon for media derivative
Patrick Plitzner
04:19 PM bug #6322 (Closed): In the specimen editor showing the warning for long loading times already has...
I tried this on the campanula test DB when searching for 'Ar*' Patrick Plitzner
03:06 PM bug #6307 (Resolved): Logfile/exception dialog should show connected datasource
Applied in changeset commit:taxeditor|5b6653af71b7c1d3ae3998057cf3fa7502a76a58. Patrick Plitzner
01:46 PM bug #6307 (In Progress): Logfile/exception dialog should show connected datasource
Patrick Plitzner
03:06 PM Revision 4abd9b52 (taxeditor): Removed unused import
Patrick Plitzner
03:06 PM Revision 5b6653af (taxeditor): fix #6307 Show contextPath in error log
Patrick Plitzner
02:45 PM Revision c005189c (cdmlib-apps): Adapt English quotation marks
Andreas Müller
02:44 PM Revision aaea23f9 (cdmlib): Add new English quotation marks
Andreas Müller
01:58 PM feature request #4246 (Resolved): Allow inserting a new node at the beginning or somewhere else i...
Applied in changeset commit:taxeditor|40bd7837ec825e5caa98e20ae64592eab98c71c1. Katja Luther
01:57 PM Revision 40bd7837 (taxeditor): fix #4246: move insert node and create new key node to one menu it...
Katja Luther
01:36 PM Revision c964d5e8 (cdm-vaadin): Fix title of distribution settings view
Patrick Plitzner
01:13 PM feature request #6321 (Closed): Implement parallel loading + progress bar for loading objects int...
Patrick Plitzner
11:52 AM bug #4377: LazyInitializationException (LIE) related to Team.teamMembers when calling portal/ta...
Potentially a duplicate of #6317 Andreas Kohlbecker
11:40 AM bug #6319 (New): change background color if changing focus from name editor to another view
Hallo,
grundsätzlich ist das nicht völlig falsch, da der Fokus dieses Fensters ja weiterhin auf der entsprechenden...
Katja Luther
11:24 AM Revision 823a79dd (cdmlib-apps): ref #6265 remove Description from Salvador taxa
Andreas Müller
11:10 AM Revision 0d3ee32e (cdmlib): cleanup
Andreas Müller
10:33 AM bug #6244: Sortindex problems in complex operations like swap synonym and accepted and others
This was part of the bugfix release as far as I remember Andreas Müller
09:42 AM bug #6296 (Resolved): Simple search for common names returns duplicates
Katja Luther
09:34 AM Revision c2c05353 (cdmlib): some code cleaning
Katja Luther

01/09/2017

11:11 PM feature request #3465: Function to copy secundum reference of a given taxon node to all it's chil...
Applied in changeset commit:cdmlib|06bf3273fe5580bb9201cb85fe829a18885a6942. Andreas Müller
11:11 PM Revision 06bf3273 (cdmlib): fix #3465 Progressmonitor API and better UpdateResult handling for se...
Andreas Müller
06:03 PM bug #6318 (Closed): Truncate TextData in FactualData View
Walter:
Hallo Andreas,
wir sind jetzt der Sache mit den angeblich verstümmelten Editorial Notes und Notes auf di...
Andreas Müller
04:11 PM bug #6317 (Resolved): LIE during request to portal/taxon/find.json
Applied in changeset commit:cdmlib|79902c85abf9675dbc9838a71327de7a54b53dd4. Andreas Kohlbecker
12:31 PM bug #6317 (Closed): LIE during request to portal/taxon/find.json

http://api.cybertaxonomy.org/salvador/portal/taxon/find.json?doTaxaByCommonNames=1&doMisappliedNames=1&doSynonyms=1...
Andreas Kohlbecker
04:11 PM Revision 79902c85 (cdmlib): fix #6317 fixing LIE related to inReference author teams
Andreas Kohlbecker
03:54 PM Revision 88a2e4be (cdmlib): un-commenting test part
Andreas Kohlbecker
03:46 PM Revision d1382189 (cdmlib): ref #6296: minor
Katja Luther
03:39 PM Revision d841fb5d (cdmlib): ref #6296: minor
Katja Luther
03:29 PM bug #6296 (In Progress): Simple search for common names returns duplicates
With the test case mentioned in #6317 an exception is thrown:
~~~
2017-01-09 15:26:32.283:WARN:oejs.ServletHandle...
Andreas Kohlbecker
03:12 PM bug #6296 (Resolved): Simple search for common names returns duplicates
Applied in changeset commit:cdmlib|8311a989da231228857d6330f10d14286e93e6fe. Katja Luther
02:32 PM bug #6296: Simple search for common names returns duplicates
The commonNameSearch is now integrated into the taxa and synonym search query. Katja Luther
09:34 AM bug #6296: Simple search for common names returns duplicates
The method in question is
~~~java
Pager<IdentifiableEntity> eu.etaxonomy.cdm.api.service.TaxonServiceImpl.findT...
Andreas Kohlbecker
03:11 PM Revision 8311a989 (cdmlib): fix #6296: include the common name search into the search query of ta...
Katja Luther
11:36 AM feature request #6316: display source references of media objects in media page
In the media page the display of sources is missing. Andreas Kohlbecker
11:34 AM feature request #6316 (New): display source references of media objects in media page
* The sources should be an ordinary attribute here, not integrated in any footnote or annotation framework
* Conside...
Andreas Kohlbecker
11:29 AM Revision 1406bf5c (cdm-dataportal): multiple minor syntax problems
Andreas Kohlbecker

01/06/2017

12:20 AM Revision 721d9357 (cdmlib): cleanup
Andreas Müller
12:17 AM feature request #6315 (Feedback): Implement setSecundumForSubtree in TaxEditor
The functionality has been implemented in #3465
It needs to be called via taxon navigator right click menu. A conf...
Andreas Müller
12:06 AM feature request #3465 (Resolved): Function to copy secundum reference of a given taxon node to al...
Applied in changeset commit:cdmlib|d97ab2bfb82c496c37bbb0d7f9b45aae078288be. Andreas Müller
12:03 AM Revision d97ab2bf (cdmlib): fix #3465 implement setSecundumForSubtree
Andreas Müller
04:40 PM Revision 1738ed58 (taxeditor): fix #5488 show only zoological nomenclatural status types not for
botanical names
- also dis some refactoring
Patrick Plitzner
03:49 PM Revision 2443669b (taxeditor): fix #5495 DetailsView is emptied when upon context stop i.e. when the
connection is shut down Patrick Plitzner
02:38 PM feature request #5714 (Resolved): In Original Source Type dropdown show Primary Taxonomic Source ...
Applied in changeset commit:taxeditor|0c7c9656704a352a2bdfea434d6b703245177c65. Patrick Plitzner
02:36 PM Revision 0c7c9656 (taxeditor): fix #5714 Add possibility for adding a comparator to EnumComboElement
- for Sources always have PrimaryTaxonomicSource or PrimaryMediaSource
on top depending on IdentifiableSource
Patrick Plitzner
02:22 PM feature request #6203: Implement unplaced and excluded in dataportal
In the navigator of the editor the nodes are loaded step by step. Therefore it is difficult to move all excluded and ... Katja Luther
01:11 PM feature request #6314 (Closed): CDM light (csv) export implemented
(Editorial Workflow in Platform-Projekten)
Hallo Katja,
wie gesagt, bevor wir ernsthaft anfangen, mit mehreren Le...
Katja Luther
12:56 PM feature request #5956: Improve functionality and UX for (children display in) breadcrumb navigati...
Andreas Müller wrote:
> 3) too wide child boxes:
>
> seems to work now. On mobile it shows only 3 columns and the...
Andreas Müller
11:21 AM feature request #5956: Improve functionality and UX for (children display in) breadcrumb navigati...
3) too wide child boxes:
seems to work now. On mobile it shows only 3 columns and they can be scolled, though it i...
Andreas Müller
11:06 AM feature request #5956: Improve functionality and UX for (children display in) breadcrumb navigati...
A new issue (maybe existed before but I did not realize): if trying to move the scrollbar by pressing the mouse butto... Andreas Müller
11:00 AM feature request #5956 (Feedback): Improve functionality and UX for (children display in) breadcru...
mobile devices:
on my Samsung S5 I still have a couple of problems
* when trying to click on the last symbol (...
Andreas Müller
10:31 AM feature request #5956: Improve functionality and UX for (children display in) breadcrumb navigati...
Andreas Kohlbecker wrote:
> all issues solved except the transparency which needs to be discussed.
>
> I am not...
Andreas Müller
11:59 AM bug #6300: DataIntegrityViolationException when saving a type
das war wohl etwas zu kurz:
Ich habe bei der Type Designation nach der Specimen Suche und „New“ im Formular „Genera...
Katja Luther
11:58 AM feature request #5474 (Closed): TermEditor menu should be more structured
looks good. Katja Luther
11:08 AM feature request #5474 (Resolved): TermEditor menu should be more structured
Applied in changeset commit:taxeditor|60e722d086b2b60ceda788e4b1ef85fbe01d13e7. Patrick Plitzner
11:54 AM bug #6296: Simple search for common names returns duplicates
tested findByEverythingFullText(), but this works fine also with more than one common name starting with the same wor... Katja Luther
09:24 AM bug #6296: Simple search for common names returns duplicates
This is a problem in the lucene search, if a taxon has two common names starting with "amate" the lucene search retur... Katja Luther
11:42 AM bug #6115 (Feedback): protect cdm content by drupal permission
Seems to work, so we can close this ticket.
Only issue is that it is difficult to use so I wonder if we can't have...
Andreas Müller
11:08 AM Revision 60e722d0 (taxeditor): fix #5474 moved Feature and NamedArea to top level
- remaining terms are under "Other..." Patrick Plitzner
10:29 AM feature request #6313 (New): Improve browser functionality of breadcrumbs
Copied from #5852
An other issue to become a full replacement of the classification tree is, that browsing is more...
Andreas Müller
10:24 AM feature request #6312 (New): [DISCUSS] Remove transparency from breadcrumps
copied from #5852: remove transparency: the transparency makes it more difficult to read the list. But we need a way ... Andreas Müller
10:10 AM feature request #2985: Improve Specimen details display
I created some test data at http://test.e-taxonomy.eu/dataportal/preview/cyprus/cdm_dataportal/taxon/066e04d3-b586-4d... Andreas Müller
10:09 AM feature request #2985 (Feedback): Improve Specimen details display
1) works well
2a) works well in terms of area level being shown, but I wonder if the new Named Area page could not b...
Andreas Müller
08:59 AM bug #5698: Ampersand (&) is not shown in labels for NameRelationships in details view
Fixed this issue and also had a look at other labels. The fix was done generically in the LabelElement class so this ... Patrick Plitzner
08:56 AM bug #5698 (Resolved): Ampersand (&) is not shown in labels for NameRelationships in details view
Applied in changeset commit:taxeditor|4f22ac1d4e12311b019edf2f6c74337f7b4e243c. Patrick Plitzner
08:56 AM Revision 4f22ac1d (taxeditor): fix #5698 Duplicate ampersand to avoid conversion to mnemonic
Patrick Plitzner
08:41 AM feature request #5922: Change order in supplemental data view
I moved both sections to the bottom. The other solution is a bit more work and maybe not that necessary so I left it out Patrick Plitzner
08:40 AM feature request #5922 (Resolved): Change order in supplemental data view
Applied in changeset commit:taxeditor|ac2d218afe325b190be79a6a8e3fb145bd3cb241. Patrick Plitzner
08:39 AM Revision ac2d218a (taxeditor): fix #5922 Move credits and rights section to the bottom
Patrick Plitzner

01/05/2017

03:35 PM feature request #3465 (In Progress): Function to copy secundum reference of a given taxon node to...
This is probably a duplicate. Andreas Müller
03:24 PM task #4232: Check all Comparators for fulfilling the Comparator contract
Please report results of current effort and maybe check for new Comparators Andreas Müller
03:23 PM task #4232: Check all Comparators for fulfilling the Comparator contract
moved IdentifiableEntity.compareTo issue to new ticket #6311 Andreas Müller
03:22 PM bug #6311 (Rejected): Refactor IdentifiableEntity.compareTo method
The IdentifiableEntity.compareTo method needs to be updated.
First of all I added the test of equality of the uuid...
Andreas Müller
03:16 PM feature request #4570: Add vocabulary for Specimen Description Features
There might be a duplicate.
This issue will be discussed in the Additivity project.
Andreas Müller
02:56 PM bug #6300: DataIntegrityViolationException when saving a type
Maybe we can merge this ticket with a master ticket for duplicate entry issues. Andreas Müller
02:54 PM feature request #6305: [MASTER] Improve EDITOR import/export UI configuration panel for all impor...
we should create subtickets for each import Andreas Müller
01:52 PM feature request #5839: Improve error message when server can't be reached
Probably duplicate for #6209 Andreas Müller
01:28 PM feature request #6270: Feature Description, customized order, granular references
This is a complex issue with different solutions like IntextRefereces (#4719) (implemented in model but not in TaxEdi... Andreas Müller
01:01 PM feature request #6310 (New): second search block
Provide a second Search block, identical to the first one
> Die Konfiguration des Suchblocks müsste dann natürlic...
Andreas Kohlbecker
10:45 AM task #5285: Use Vaadin Spring Add-on
UPDATE:
Vaadin, the polyglot framework for building web apps with UI components, released version 1.1 of their Vaa...
Andreas Kohlbecker
10:29 AM bug #4945 (Feedback): Right click menu for polytomous key node list view needs correct enabling
Andreas Müller
10:26 AM bug #4945: Right click menu for polytomous key node list view needs correct enabling
Andreas Müller wrote:
> I tried to delete an in-between node answering the dialog if children should be deleted by "...
Andreas Müller
10:22 AM bug #4945: Right click menu for polytomous key node list view needs correct enabling
I tried to delete an in-between node answering the dialog if children should be deleted by "NO". This resulted in an ... Andreas Müller
10:20 AM bug #4945: Right click menu for polytomous key node list view needs correct enabling
Some issues:
* Refresh nodes is disabled if no selection, however, it probably always refreshes all nodes of the ke...
Andreas Müller
10:28 AM feature request #5841 (Closed): Creating a new alternative in PolytomousKey Editor should set foc...
Seems to work fine Andreas Müller

01/04/2017

12:11 AM bug #6209 (Feedback): NPE in DatasourceView
The error message is much better now. However, "Problem accessing remote server" is a very short message. We could ma... Andreas Müller
 

Also available in: Atom

Add picture from clipboard (Maximum size: 40 MB)