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From 12/08/2016 to 01/06/2017

01/06/2017

04:40 PM Revision 1738ed58 (taxeditor): fix #5488 show only zoological nomenclatural status types not for
botanical names
- also dis some refactoring
Patrick Plitzner
03:49 PM Revision 2443669b (taxeditor): fix #5495 DetailsView is emptied when upon context stop i.e. when the
connection is shut down Patrick Plitzner
02:38 PM feature request #5714 (Resolved): In Original Source Type dropdown show Primary Taxonomic Source ...
Applied in changeset commit:taxeditor|0c7c9656704a352a2bdfea434d6b703245177c65. Patrick Plitzner
02:36 PM Revision 0c7c9656 (taxeditor): fix #5714 Add possibility for adding a comparator to EnumComboElement
- for Sources always have PrimaryTaxonomicSource or PrimaryMediaSource
on top depending on IdentifiableSource
Patrick Plitzner
02:22 PM feature request #6203: Implement unplaced and excluded in dataportal
In the navigator of the editor the nodes are loaded step by step. Therefore it is difficult to move all excluded and ... Katja Luther
01:11 PM feature request #6314 (Closed): CDM light (csv) export implemented
(Editorial Workflow in Platform-Projekten)
Hallo Katja,
wie gesagt, bevor wir ernsthaft anfangen, mit mehreren Le...
Katja Luther
12:56 PM feature request #5956: Improve functionality and UX for (children display in) breadcrumb navigati...
Andreas Müller wrote:
> 3) too wide child boxes:
>
> seems to work now. On mobile it shows only 3 columns and the...
Andreas Müller
11:21 AM feature request #5956: Improve functionality and UX for (children display in) breadcrumb navigati...
3) too wide child boxes:
seems to work now. On mobile it shows only 3 columns and they can be scolled, though it i...
Andreas Müller
11:06 AM feature request #5956: Improve functionality and UX for (children display in) breadcrumb navigati...
A new issue (maybe existed before but I did not realize): if trying to move the scrollbar by pressing the mouse butto... Andreas Müller
11:00 AM feature request #5956 (Feedback): Improve functionality and UX for (children display in) breadcru...
mobile devices:
on my Samsung S5 I still have a couple of problems
* when trying to click on the last symbol (...
Andreas Müller
10:31 AM feature request #5956: Improve functionality and UX for (children display in) breadcrumb navigati...
Andreas Kohlbecker wrote:
> all issues solved except the transparency which needs to be discussed.
>
> I am not...
Andreas Müller
11:59 AM bug #6300: DataIntegrityViolationException when saving a type
das war wohl etwas zu kurz:
Ich habe bei der Type Designation nach der Specimen Suche und „New“ im Formular „Genera...
Katja Luther
11:58 AM feature request #5474 (Closed): TermEditor menu should be more structured
looks good. Katja Luther
11:08 AM feature request #5474 (Resolved): TermEditor menu should be more structured
Applied in changeset commit:taxeditor|60e722d086b2b60ceda788e4b1ef85fbe01d13e7. Patrick Plitzner
11:54 AM bug #6296: Simple search for common names returns duplicates
tested findByEverythingFullText(), but this works fine also with more than one common name starting with the same wor... Katja Luther
09:24 AM bug #6296: Simple search for common names returns duplicates
This is a problem in the lucene search, if a taxon has two common names starting with "amate" the lucene search retur... Katja Luther
11:42 AM bug #6115 (Feedback): protect cdm content by drupal permission
Seems to work, so we can close this ticket.
Only issue is that it is difficult to use so I wonder if we can't have...
Andreas Müller
11:08 AM Revision 60e722d0 (taxeditor): fix #5474 moved Feature and NamedArea to top level
- remaining terms are under "Other..." Patrick Plitzner
10:29 AM feature request #6313 (New): Improve browser functionality of breadcrumbs
Copied from #5852
An other issue to become a full replacement of the classification tree is, that browsing is more...
Andreas Müller
10:24 AM feature request #6312 (New): [DISCUSS] Remove transparency from breadcrumps
copied from #5852: remove transparency: the transparency makes it more difficult to read the list. But we need a way ... Andreas Müller
10:10 AM feature request #2985: Improve Specimen details display
I created some test data at http://test.e-taxonomy.eu/dataportal/preview/cyprus/cdm_dataportal/taxon/066e04d3-b586-4d... Andreas Müller
10:09 AM feature request #2985 (Feedback): Improve Specimen details display
1) works well
2a) works well in terms of area level being shown, but I wonder if the new Named Area page could not b...
Andreas Müller
08:59 AM bug #5698: Ampersand (&) is not shown in labels for NameRelationships in details view
Fixed this issue and also had a look at other labels. The fix was done generically in the LabelElement class so this ... Patrick Plitzner
08:56 AM bug #5698 (Resolved): Ampersand (&) is not shown in labels for NameRelationships in details view
Applied in changeset commit:taxeditor|4f22ac1d4e12311b019edf2f6c74337f7b4e243c. Patrick Plitzner
08:56 AM Revision 4f22ac1d (taxeditor): fix #5698 Duplicate ampersand to avoid conversion to mnemonic
Patrick Plitzner
08:41 AM feature request #5922: Change order in supplemental data view
I moved both sections to the bottom. The other solution is a bit more work and maybe not that necessary so I left it out Patrick Plitzner
08:40 AM feature request #5922 (Resolved): Change order in supplemental data view
Applied in changeset commit:taxeditor|ac2d218afe325b190be79a6a8e3fb145bd3cb241. Patrick Plitzner
08:39 AM Revision ac2d218a (taxeditor): fix #5922 Move credits and rights section to the bottom
Patrick Plitzner

01/05/2017

03:35 PM feature request #3465 (In Progress): Function to copy secundum reference of a given taxon node to...
This is probably a duplicate. Andreas Müller
03:24 PM task #4232: Check all Comparators for fulfilling the Comparator contract
Please report results of current effort and maybe check for new Comparators Andreas Müller
03:23 PM task #4232: Check all Comparators for fulfilling the Comparator contract
moved IdentifiableEntity.compareTo issue to new ticket #6311 Andreas Müller
03:22 PM bug #6311 (Rejected): Refactor IdentifiableEntity.compareTo method
The IdentifiableEntity.compareTo method needs to be updated.
First of all I added the test of equality of the uuid...
Andreas Müller
03:16 PM feature request #4570: Add vocabulary for Specimen Description Features
There might be a duplicate.
This issue will be discussed in the Additivity project.
Andreas Müller
02:56 PM bug #6300: DataIntegrityViolationException when saving a type
Maybe we can merge this ticket with a master ticket for duplicate entry issues. Andreas Müller
02:54 PM feature request #6305: [MASTER] Improve EDITOR import/export UI configuration panel for all impor...
we should create subtickets for each import Andreas Müller
01:52 PM feature request #5839: Improve error message when server can't be reached
Probably duplicate for #6209 Andreas Müller
01:28 PM feature request #6270: Feature Description, customized order, granular references
This is a complex issue with different solutions like IntextRefereces (#4719) (implemented in model but not in TaxEdi... Andreas Müller
01:01 PM feature request #6310 (New): second search block
Provide a second Search block, identical to the first one
> Die Konfiguration des Suchblocks müsste dann natürlic...
Andreas Kohlbecker
10:45 AM task #5285: Use Vaadin Spring Add-on
UPDATE:
Vaadin, the polyglot framework for building web apps with UI components, released version 1.1 of their Vaa...
Andreas Kohlbecker
10:29 AM bug #4945 (Feedback): Right click menu for polytomous key node list view needs correct enabling
Andreas Müller
10:26 AM bug #4945: Right click menu for polytomous key node list view needs correct enabling
Andreas Müller wrote:
> I tried to delete an in-between node answering the dialog if children should be deleted by "...
Andreas Müller
10:22 AM bug #4945: Right click menu for polytomous key node list view needs correct enabling
I tried to delete an in-between node answering the dialog if children should be deleted by "NO". This resulted in an ... Andreas Müller
10:20 AM bug #4945: Right click menu for polytomous key node list view needs correct enabling
Some issues:
* Refresh nodes is disabled if no selection, however, it probably always refreshes all nodes of the ke...
Andreas Müller
10:28 AM feature request #5841 (Closed): Creating a new alternative in PolytomousKey Editor should set foc...
Seems to work fine Andreas Müller

01/04/2017

12:11 AM bug #6209 (Feedback): NPE in DatasourceView
The error message is much better now. However, "Problem accessing remote server" is a very short message. We could ma... Andreas Müller
11:49 PM feature request #6050: provide the possibility to choose the fields of the simple details view fo...
Additionally there are layout and labeling issues
* No German translation
* (maybe functional) If "Show only a ...
Andreas Müller
11:36 PM feature request #6050 (Feedback): provide the possibility to choose the fields of the simple deta...
There are some functional issues:
* "Show appended phrase" can not be switched on
* "Show name relationship sec...
Andreas Müller
04:06 PM bug #6218 (Closed): NPE when editing term vocabulary label
Seems to be fixed Andreas Müller
03:08 PM Revision 9e550198 (taxeditor): fix #4821: create OrderedTermvoc for OrderedTerms
Katja Luther
02:34 PM bug #6309 (Closed): Creating an existing user throws exception
When creating a user with a username that does already exist throws an "unexpected error".
Instead an expected err...
Andreas Müller

01/03/2017

09:39 PM feature request #6308 (Resolved): Add configuration dialog for the deletion of synonyms in name e...
for the deletion of synonyms we also need a configuration dialog, similar to the deletion of taxa. Katja Luther
03:23 PM bug #6307 (Closed): Logfile/exception dialog should show connected datasource
Currently it shows information like
~~~
login : ki
editor version : 4.3.0
server : api.cybertaxonomy.org / cybe...
Andreas Müller
11:06 AM feature request #3573 (Closed): Improve EDITOR import UI configuration panel
Katja Luther
10:39 AM feature request #3573: Improve EDITOR import UI configuration panel
We should do this for all types of imports. Close this ticket and create a new one for the other imports, see #6305 Katja Luther
10:55 AM bug #6304 (In Progress): Deleting of Person used as user does not work
The isDeletable Method needs to be called. Katja Luther
10:38 AM feature request #6305 (New): [MASTER] Improve EDITOR import/export UI configuration panel for all...
see #3573
Master ticket for subtickets
Katja Luther
10:27 AM bug #4461 (Closed): Ordering in datasources view fails
works fine. Katja Luther
10:14 AM feature request #5971 (Closed): Implement database wide CdmPreference writing
this works now. Katja Luther
09:58 AM bug #6299 (Resolved): Error when deleting reference in bulk editor
Applied in changeset commit:cdmlib|82bf3f79c95b9d641ebd2528ca32c98a804c7019. Katja Luther
09:51 AM bug #6299: Error when deleting reference in bulk editor
This problem could be solved by catching the hibernate exception when there is no currentSession and create a new ses... Katja Luther
09:37 AM bug #6299: Error when deleting reference in bulk editor
I could reproduce the exception, following message is shown:
Could not obtain transaction-synchronized Session for...
Katja Luther
09:57 AM Revision 82bf3f79 (cdmlib): fix #6299: add openSession in getSession when there is no current se...
Katja Luther

12/23/2016

05:18 PM Revision 31092b58 (cdmlib-apps): minor
Andreas Müller
05:18 PM Revision acf4e805 (cdmlib-apps): ref #6286 first incomplete version of Flora Hellenica import
Andreas Müller
04:18 PM Revision b1fc732c (cdmlib-apps): ref #3934 latest changes to Salvador import
Andreas Müller
03:44 PM bug #6304 (Closed): Deleting of Person used as user does not work
A person that is referenced from the user class can not be deleted via bulk editor.
No exception is thrown but the u...
Andreas Müller
02:11 PM bug #6303 (Closed): distribution map is moving too fast
when trying to move the distribution map with the mouse it is moving too fast so I can't drag it to the point I'm loo... Gabriele Dröge
01:52 PM feature request #6302 (New): enable mouseover for distribution map
A mouseover for the distribution map would be very helpful (name of the area displayed). When adding multiple sources... Gabriele Dröge
11:45 AM feature request #6301 (Closed): Display of sources for images
Currently sources are not displayed for images in the dataportal. This is probably needed for Salvador and generally ... Andreas Müller

12/22/2016

04:07 PM bug #6300 (Closed): DataIntegrityViolationException when saving a type
Walter:
"Hallo,
habe eine Typusangabe in den Cache gestellt, beim Speichern des Taxons dann untenstehender Fehl...
Patrick Plitzner
04:02 PM bug #6299 (Feedback): Error when deleting reference in bulk editor
Henning:
Hallo zusammen,

die Meldung kam, als ich im BulkEditor (PhycoBank, production) „Testjournal“ lösche...
Patrick Plitzner
03:56 PM bug #6298 (New): Add delete button for areas for common names and for person in user
Walter:
" Bei den Areas gibt’s keinen Leereintrag und auch keinen Delete Knopf, ich bekomme also eine einmal ausgewä...
Patrick Plitzner
03:36 PM feature request #6288: harmonize CommonName feature block elements
I put the area and language label in one common span element which now has a different class attribute: `language-are... Andreas Kohlbecker
03:33 PM feature request #6288 (Resolved): harmonize CommonName feature block elements
Applied in changeset commit:cdm-dataportal|a20ddbc40ff8c0cd4ab5de022de3085606c2b512. Andreas Kohlbecker
03:33 PM Revision a20ddbc4 (cdm-dataportal): fix #6288 common names area and language label in one common ...
Andreas Kohlbecker
02:37 PM Revision c278f2a0 (cdm-dataportal): Fixing case of labels and adding spanisch translations
Andreas Kohlbecker
02:22 PM bug #6297: [Overview] BGBM User group wishes 2017
Hallo Andreas,
danke, nehme ich auf.
[Bin aber von der Lösung noch nicht so überzeugt, wenn ich das Ergebnis etw...
Andreas Müller
02:22 PM bug #6297 (New): [Overview] BGBM User group wishes 2017
For older tasks see #5595, #4585, #4031
* Footnotes (see comment below)
* Taxon annotations: #6192
* Original sp...
Andreas Müller
02:08 PM Revision 86ea4f4a (cdmlib-apps): ref #3934 latest changes to Salvador import
Andreas Müller
02:05 PM bug #6296 (Resolved): Simple search for common names returns duplicates
This is a bug the cdmlib-services
For example:
~~~
http -b http://api.cybertaxonomy.org/salvador/portal/taxon/...
Andreas Kohlbecker
12:04 PM bug #6295 (Closed): NPE when creating a new taxon
fixed with commit:taxeditor|cba60f25a0b26dbd884e94772d798e72ccf072e4. Patrick Plitzner
12:01 PM bug #6295 (Closed): NPE when creating a new taxon
Walter:
"Hallo,
ich habe aus Versehen einen Namen mit Literatur in die New Taxon Eingabe (aus dem Navigator auf...
Patrick Plitzner
11:09 AM Revision cba60f25 (taxeditor): Fix possible NPE
Patrick Plitzner

12/21/2016

06:47 PM bug #6290 (Closed): style Phycobank registration data in tabular style
Andreas Kohlbecker
06:39 PM bug #6290: style Phycobank registration data in tabular style
Table view is fine! Wolf-Henning Kusber
06:34 PM bug #6290: style Phycobank registration data in tabular style
Hi Henning this is fixed.
Please can you do the review to confirm that this meets the expectation?
Andreas Kohlbecker
06:32 PM bug #6290 (Resolved): style Phycobank registration data in tabular style
Applied in changeset commit:cdm-dataportal|cbdcd48adbb5d18997b56dfb90ad948b410af416. Andreas Kohlbecker
06:44 PM feature request #6292 (Closed): IAPT-Data Registration date
Fixed Andreas Kohlbecker
06:43 PM feature request #6292 (Resolved): IAPT-Data Registration date
Applied in changeset commit:cdm-dataportal|03c3b241326bfe7d67adf9600785460465154f03. Andreas Kohlbecker
06:43 PM Revision 03c3b241 (cdm-dataportal): fix #6292 adding century and decade to redistration date, and ..
fixing theme/layout bug Andreas Kohlbecker
06:31 PM Revision cbdcd48a (cdm-dataportal): fix #6290 Phycobank registration data as table
Andreas Kohlbecker
04:32 PM bug #6291 (Closed): allow hiding the classification information from the search results
Andreas Kohlbecker
04:31 PM bug #6291: allow hiding the classification information from the search results
The classifications detail can now be hidden by
~~~css
#search_results .classifications {
display: none;
}
~~~
Andreas Kohlbecker
04:31 PM bug #6291 (Resolved): allow hiding the classification information from the search results
Applied in changeset commit:cdm-dataportal|2813096fafb6deb9cd87e2541a4db0bca6e35a0b. Andreas Kohlbecker
04:31 PM Revision 2813096f (cdm-dataportal): fix #6291 search results: separator inside of classifications...
Andreas Kohlbecker
03:32 PM Revision 5de87f23 (cdm-dataportal): more spanish translations
Andreas Kohlbecker
09:14 AM Revision 79f00d65 (cdmlib-apps): Merge branch 'master' into noChecklistClone
Patrick Plitzner
08:53 AM Revision 8f3ec9d0 (cdm-dataportal): more spanish translations (Images)
Andreas Kohlbecker

12/20/2016

06:39 PM bug #6293 (New): Advanced search does not allow standard author abbreviations according to Brummi...
PhycoBank:
Use case: All records of the author Kützing, databased as Kütz.
*Kütz* gives all data back, *Kütz.* gi...
Wolf-Henning Kusber
06:23 PM feature request #6292 (Closed): IAPT-Data Registration date
In IAPT there are normally dates such as dd.mm.yy (dd.mm.yyyy is only used by Office Eghan=Index Fungorum, not releva... Wolf-Henning Kusber
05:37 PM bug #6291 (Closed): allow hiding the classification information from the search results
allow hiding the classification information from the search results when the search is not limited to one classification Andreas Kohlbecker
05:35 PM bug #6290 (Closed): style Phycobank registration data in tabular style
Either style the definition list like it is described in see http://stackoverflow.com/questions/1713048/how-to-style-... Andreas Kohlbecker
02:34 PM bug #6190 (Closed): remove svn property place holder in first line of code
Andreas Kohlbecker
02:29 PM Revision e15d2c8e (cdmlib): ref #6190 removing svn property place holder in first line of code - ...
Andreas Kohlbecker
02:29 PM Revision eb291d61 (cdm-vaadin): ref #6190 removing svn property place holder in first line of code
Andreas Kohlbecker
02:28 PM Revision ebc31cb0 (taxeditor): ref #6190 removing svn property place holder in first line of code...
Andreas Kohlbecker
02:22 PM Revision e3240965 (taxeditor): ref #6190 removing svn property place holder in first line of code...
Andreas Kohlbecker
02:18 PM Revision f6147a2a (cdm-dataportal): whitespace cleanup
Andreas Kohlbecker
01:16 PM Revision 68a19847 (cdmlib): minot
Katja Luther
01:03 PM Revision 23925b61 (taxeditor): missing changes
Katja Luther
01:02 PM Revision 7cbe2b56 (cdmlib): missing changes for repair methods and cdmPreferences in editor
Katja Luther
12:54 PM Revision ab553c7a (taxeditor): minor
Katja Luther
12:50 PM Revision 6c704323 (taxeditor): minor to fix failing jenkins
Katja Luther
11:54 AM Revision 8ec6cdfe (cdm-dataportal): ref #6190 removing svn property place holder in first line of...
Andreas Kohlbecker
11:53 AM Revision c2c69eb8 (cdmlib-apps): ref #6190 removing svn property place holder in first line of code
Andreas Kohlbecker
11:50 AM Revision 7b2a0df1 (cdm-vaadin): ref #6190 removing svn property place holder in first line of code
Andreas Kohlbecker
11:49 AM Revision d45008d0 (cdmlib): ref #6190 removing svn property place holder in first line of code
Andreas Kohlbecker
11:46 AM Revision f05fd10f (cdm-server): ref #6190 removing svn property place holder in first line of code
Andreas Kohlbecker
11:20 AM bug #6289 (Closed): “Back to images” link as “Back to taxon page” when in table-less mode
Andreas Kohlbecker
11:00 AM feature request #6288 (Closed): harmonize CommonName feature block elements
1. The area label should be in its own `span` dom element with class attribute `area-label`
1. ~~The area label and ...
Andreas Kohlbecker
10:15 AM Revision 7afb5232 (cdm-dataportal): fixing case in labels and translation
Andreas Kohlbecker

12/19/2016

04:17 PM Revision 696d86cd (cdm-server): ref #6287 removing useless RollingFileAppender logger
Andreas Kohlbecker
04:16 PM Revision fa39cfe4 (taxeditor): more changes for configurable name details view
Katja Luther
04:14 PM Revision d37de08a (taxeditor): adaptions for polytomous key editing to avoid null values in child...
Katja Luther
04:14 PM bug #6287: Rolling cdmserver.log file only contains entries from startup phase
The logging into files needs to be configured to jetty:
http://www.eclipse.org/jetty/documentation/current/confi...
Andreas Kohlbecker
04:05 PM bug #6287 (In Progress): Rolling cdmserver.log file only contains entries from startup phase
The last entry in the cdmserver.log always is:
~~~
... INFO [eu.etaxonomy.cdm.server.instance.CdmInstance] - life...
Andreas Kohlbecker
04:04 PM Revision 05030527 (taxeditor): ref #6105: add name details view configuration to the cdm preferen...
Katja Luther
03:58 PM Revision 5c9c924c (taxeditor): deduplicate the nomenclatural code preference page in preferences ...
Katja Luther
03:50 PM Revision 72aea936 (cdm-server): removing java 1.8 settings from IDE launcher
Andreas Kohlbecker
03:42 PM bug #2939: ehcache diskStore conflict?
I vote for putting this ticket into the 4.6 milestone Andreas Kohlbecker
03:17 PM feature request #6249 (Resolved): better logging strategy
Applied in changeset commit:cdmlib|f0cf14ebe5283f76a2dcf2134f0eb3aefab51e6f. Andreas Kohlbecker
03:17 PM Revision f0cf14eb (cdmlib): fix #6249 prefixig all logappender with instance (bean) name and disa...
Andreas Kohlbecker
10:23 AM task #6284: media.bgbm.org available via https
Dominik wrote:
----
Hallo Andreas,
das ist so einfach nicht machbar...
Ist ein Tomcat Server unter Window...
Andreas Kohlbecker

12/18/2016

12:12 AM feature request #6050 (Resolved): provide the possibility to choose the fields of the simple deta...
Andreas Müller
12:05 AM task #6137 (In Progress): Urgent imports
Andreas Müller
12:02 AM task #6286 (In Progress): Import Flora Hellenica
Andreas Müller
12:02 AM task #6286 (Resolved): Import Flora Hellenica
Import
* accepted taxa with distribution and some statuses
* synonym list including misapplications as "auct. ...
Andreas Müller
11:48 AM bug #6285 (New): select list for facts too long for laptop display
Can't scroll down when creating new fact on a laptop, see screenshot. Please reduce size of this selection list.
I...
Gabriele Dröge

12/16/2016

04:37 PM feature request #6275 (Closed): Phycobank - DataPortal: display registration data stored in name ...
Hi Henning,
the registration data is now visible: http://test.e-taxonomy.eu/dataportal/preview/phycobank/cdm_datap...
Andreas Kohlbecker
04:32 PM feature request #6275 (Resolved): Phycobank - DataPortal: display registration data stored in nam...
Applied in changeset commit:cdm-dataportal|270bb74883453db300b75625613f568e5241c125. Andreas Kohlbecker
03:35 PM feature request #6275 (In Progress): Phycobank - DataPortal: display registration data stored in ...
Andreas Kohlbecker
04:32 PM Revision 270bb748 (cdm-dataportal): fix #6275 implmenting phycobank module:
- preliminary block to show registration data Andreas Kohlbecker
03:28 PM bug #6192 (Feedback): taxon annotations only shown when 'Show accepted taxon on top of the synon...
Annotations on the accepted taxon are not necessarily only related to synonymy information. Therefore the according f... Andreas Kohlbecker
03:08 PM bug #6192 (In Progress): taxon annotations only shown when 'Show accepted taxon on top of the sy...
Andreas Kohlbecker
02:37 PM feature request #4490: Make the label of the taxon page tabs customizable for portal admins
@ Andreas M.:
When reviewing you can take a look at http://test.e-taxonomy.eu/dataportal/preview/rubiaceae-mexico/...
Andreas Kohlbecker
02:14 PM feature request #4490 (Resolved): Make the label of the taxon page tabs customizable for portal a...
Applied in changeset commit:cdm-dataportal|4feeabc7eb75a09ab5a445413a4b6a3505c49e37. Andreas Kohlbecker
02:35 PM Revision 2a61a296 (cdm-dataportal): ref #4490 improving settings documentation
Andreas Kohlbecker
02:26 PM Revision ed0183ea (cdm-dataportal): ref #4490 cleaning up: removing theme registry entry
Andreas Kohlbecker
02:14 PM Revision 4feeabc7 (cdm-dataportal): fix #4490 taxon page tab labels configurable and fixing trans...
Andreas Kohlbecker
08:56 AM Revision 0cdfbe50 (cdm-webapp): fix #6256 building war only with cdmlib-*.jar files from cdm-remo...
Andreas Kohlbecker

12/15/2016

05:34 PM feature request #6278: add sec reference as class attribute to all taxon markup
implemented!
The taxa with the phycobank sec reference can be styled with the following css (for test database):
...
Andreas Kohlbecker
05:32 PM feature request #6278 (Resolved): add sec reference as class attribute to all taxon markup
Applied in changeset commit:cdm-dataportal|4b3be949345d1350fc13ff2e39a908f3c2e84a77. Andreas Kohlbecker
05:32 PM Revision 4b3be949 (cdm-dataportal): fix #6278 sec uuid and taxon uuid as class attribute to all t...
Andreas Kohlbecker
04:41 PM bug #6259: Media page problems with multiple media representations
please review Andreas Kohlbecker
04:40 PM bug #6259 (Resolved): Media page problems with multiple media representations
Applied in changeset commit:cdm-dataportal|a867b77477619b9ef73c8f5ef5c04613f6ec7e78. Andreas Kohlbecker
03:13 PM bug #6259 (In Progress): Media page problems with multiple media representations
Andreas Kohlbecker
04:40 PM Revision a867b774 (cdm-dataportal): fix #6259 solving multiple problems in the media page related...
Andreas Kohlbecker
03:12 PM bug #6260: media page: rights stored in the cdm are not displayed
done, please review. Andreas Kohlbecker
03:10 PM bug #6260 (Resolved): media page: rights stored in the cdm are not displayed
Applied in changeset commit:cdm-dataportal|daef68e94e5ad40fb7fb395f818822ee1ff3c5ee. Andreas Kohlbecker
03:10 PM Revision daef68e9 (cdm-dataportal): fix #6260 fixing display of rights on image page
Andreas Kohlbecker
02:29 PM bug #6281: delete synonym with annotations throws exception
this seems to be only a problem if the annotation is related to a synonym not if it is related to a taxon.
The exce...
Katja Luther
02:04 PM Revision 887cb9a0 (cdmlib): minor to fix the failing test
Katja Luther
01:28 PM bug #6268 (Resolved): descriptions missing in media service responses
Applied in changeset commit:cdmlib|2b4395edfa8bfe9cf7177d34edaa694416a1969f. Andreas Kohlbecker
01:28 PM Revision 2b4395ed (cdmlib): fix #6268 initializing decriptions of media entities for portal webse...
Andreas Kohlbecker
12:39 PM Revision d8cc12a4 (cdmlib): ref #6283: minor changes to fix exceptions in polytomous key editing
Katja Luther
12:09 PM bug #6261 (Resolved): NPE while processing /portal/media/{uuid}/sources in BaseController
Applied in changeset commit:cdmlib|a1765b1ac1036e1582a49691e5b3699fca3c5128. Andreas Kohlbecker
12:09 PM Revision a1765b1a (cdmlib): fix #6261 searching all superclasses for generic type arguments in ba...
Andreas Kohlbecker
11:41 AM bug #6224 (Closed): cdm-webapp is not using current version of cdmlib-remote-webapp.war
seems to be fixed Andreas Kohlbecker
11:32 AM task #6284 (New): media.bgbm.org available via https

https://media.bgbm.org/erez/cache/eRez%40EditWP6_photos_Lapsana_communis_A_01_jpg_d5760c1f305514ac.jpg
Andreas Kohlbecker
11:22 AM bug #6283: Exceptions when editing polytomous key
There where still some NPE caused by null values in children list of polytomouskey nodes. And sometimes a ConcurrentM... Katja Luther
11:09 AM bug #6283 (Closed): Exceptions when editing polytomous key
Hallo Katja,

ich habe mich dieses Jahr doch noch an neuen Schlüsseln versucht. Bei Orchis gab es ein paar Fehlerm...
Katja Luther
11:13 AM Revision 99c779dd (cdmlib): ref #6283: fix NPE exceptions caused by null values in children list
Katja Luther
09:14 AM bug #6282 (New): FSI image viewer not working with https

for example: https://test.e-taxonomy.eu/dataportal/preview/cichorieae/cdm_dataportal/taxon/5d65f017-0c23-43e4-888...
Andreas Kohlbecker
09:12 AM feature request #6110 (Closed): Use https for map service calls when the portal is access via https
The maps are working when accessing taxon pages via https Andreas Kohlbecker

12/14/2016

04:28 PM bug #6281 (Closed): delete synonym with annotations throws exception
Das Löschen von Synonymen geht zwar letztlich, aber es kommt immer zuerst eine Fehlermeldung (s.u.).
Nur wenn man di...
Katja Luther

12/13/2016

05:21 PM bug #6280 (New): data in taxon editor view and details are not refreshed when pressing F5
Situation: Data dhanges by a second user in another TaxEditor or in the database directly.
The only way to refresh...
Andreas Kohlbecker
04:32 PM task #3560: Withheld unpublished taxa from webservice used in E+M dataportal
this is crucial for the phycobank. Andreas Kohlbecker
04:23 PM feature request #6278 (Closed): add sec reference as class attribute to all taxon markup
This is needed to be able to style the taxa related to a specific scref differently. The taxa with the 'phycobank' se... Andreas Kohlbecker
02:52 PM bug #6276: Nomenclatural references show parsed date string instead of publication year
Hi Andreas,
this issue is important for us. We need at least an idea of why this is happening and if the nomencalt...
Andreas Kohlbecker
02:49 PM bug #6276 (New): Nomenclatural references show parsed date string instead of publication year

For example 'Staurastrum longebrachiatum var. quadrifidum (Grönblad) A.A.Gontsch.' in the phycobank database:
Th...
Andreas Kohlbecker
02:00 PM feature request #6275: Phycobank - DataPortal: display registration data stored in name extension
implement as phycobank module Andreas Kohlbecker
01:58 PM feature request #6275 (Closed): Phycobank - DataPortal: display registration data stored in name ...

show below Name and footnote as string as in IAPT
Andreas Kohlbecker
12:45 PM Revision 43d3d0b7 (cdmlib): minor
Katja Luther
12:25 PM Revision 33525203 (cdmlib): minor
Katja Luther
11:48 AM Revision 62d8efcf (cdmlib): extend biocase import
Katja Luther
11:46 AM Revision df89b529 (cdmlib): extend excel import for tropicos
Katja Luther

12/12/2016

02:58 PM Revision 6d4c1ca5 (cdm-dataportal): generalizing test assertion
Andreas Kohlbecker
02:27 PM bug #6274 (Resolved): add update of childrenCount cache in repair method
Applied in changeset commit:cdmlib|3977b110dd5f22387a52d4707607b4a3ecaebbec. Katja Luther
02:24 PM bug #6274 (Closed): add update of childrenCount cache in repair method
caused by the sortindex problem there are some childrenCount caches which are not correctly updated. Therefore we nee... Katja Luther
02:27 PM Revision 3977b110 (cdmlib): fix #6274: add an update for childrenCount cache if count of children...
Katja Luther
02:05 PM bug #6273 (New): Drag&Drop a classification on the rights editing form throws NPE
WHen trying to add a new right to a user group via the rights form (user group bulk editor, right click menu, edit ri... Andreas Müller
01:54 PM bug #6272 (New): Searching in user group bulk editor throws "unexpected error" if rights are not ...

Instead we should have a dialog saying that the user has no right to do the search.
I also wonder why the securi...
Andreas Müller
01:26 PM task #6271 (Duplicate): Move user and user groups from bulk editor menu to Admin menu
... and add a separator before Andreas Müller

12/11/2016

01:15 PM feature request #6270 (New): Feature Description, customized order, granular references
Requirement: Place References where important. http://dataportal.corvids.de/cdm_dataportal/taxon/6f4437d0-5d24-4419-a... Gabriele Dröge
08:04 AM feature request #5550 (In Progress): Add languages to the editable terms
DISCUSS: is it possible to add languages to the editable terms? Should we add ISO 639-5 languages before? Andreas Müller

12/10/2016

08:53 PM bug #6269 (Rejected): image vanished in portal
hmm, now it appears suddenly. Sorry, don't know what happened. Gabriele Dröge
08:48 PM bug #6269 (Rejected): image vanished in portal
I've changed the url of a specimen image (Feature->Specimen->Media) and in the EDITor the preview is displayed, but i... Gabriele Dröge

12/09/2016

04:20 PM bug #6268 (Closed): descriptions missing in media service responses
The description for media entities is missing:
http://portal.cybertaxonomy.org/salvador/cdm_dataportal/media/bc3c1...
Andreas Kohlbecker
03:37 PM bug #6267 (New): Name Relationship supplemental data not always editable
e.g the later homonym relationship from Coutarea latiflora DC. to Coutarea latiflora Sessé & Moc. ex DC. in Salvador... Andreas Müller
11:42 AM task #6263 (New): [DISCUSS] Should Credit be reusable
For discussion see also #5762.
How are Credits used currently? Are there many duplicates?
Andreas Müller
11:40 AM bug #6262 (Closed): Implement Rights reusable in TaxEditor
Since #5762 Rights are reusable. This is important e.g. for copyright statements for image where statements are used ... Andreas Müller
11:29 AM Revision ce155df5 (cdmlib): ref #5762 Rights to be reusable, still need to update existing unique
Andreas Müller
11:29 AM Revision 6ea78a24 (cdmlib): cleanup
Andreas Müller
11:29 AM Revision 3033ffb5 (cdmlib): ref #3934 add department to NamedAreaLevel
Andreas Müller
11:22 AM Revision c3a6a3bf (cdmlib-apps): ref #6252 and ref #3934 Improve image import, fix distribution i...
Andreas Müller
11:18 AM Revision 4dbe9763 (cdmlib): cleanup
Andreas Müller

12/08/2016

09:30 PM task #6252: Implement image import
should be fixed except for reusability of copyright #5762 Andreas Müller
09:23 PM Revision 23df441c (cdmlib-apps): ref #6252 improve salvador image import
Andreas Müller
09:21 PM Revision f7316ff3 (cdmlib-apps): ref #3937 Remove marker from salvador import
Andreas Müller
04:22 PM Revision aaf7e87c (cdmlib-apps): ref #6252 updates for salvador image import
Andreas Müller
04:18 PM Revision 46efdd16 (cdmlib): cleanup (including deprecated methods in Media)
Andreas Müller
04:17 PM Revision b32e0a74 (cdmlib-apps): ref #2937 start GermanSL import
Andreas Müller
04:16 PM Revision ccbc2c9f (cdmlib-apps): ref #3934 Add feature tree to SalvadorActivator
Andreas Müller
03:30 PM bug #6192: taxon annotations only shown when 'Show accepted taxon on top of the synonymy' is en...
This is important for the Salvador portal Andreas Müller
02:57 PM bug #6261 (Closed): NPE while processing /portal/media/{uuid}/sources in BaseController
http://api.cybertaxonomy.org/salvador/portal/media/9a650031-04cc-48dc-a68b-8d67350423d6/sources.json
strangely thi...
Andreas Kohlbecker
02:52 PM bug #6260 (Closed): media page: rights stored in the cdm are not displayed
Andreas Kohlbecker
02:51 PM bug #6259 (Closed): Media page problems with multiple media representations
Example: http://portal.cybertaxonomy.org/salvador/cdm_dataportal/media/9a650031-04cc-48dc-a68b-8d67350423d6/8bd66e44-... Andreas Kohlbecker
01:14 PM task #6258 (In Progress): Add Registration to cdm model
Andreas Müller
11:08 AM task #6258: Add Registration to cdm model
We also need a new Enum RegistrationStatus, with instances defined in #6168 Andreas Müller
10:04 AM task #6258: Add Registration to cdm model
For the Algea-Registry the model needs to be extended by a Registration class (for the detailed discussion see #6044)... Andreas Kohlbecker
09:59 AM task #6258 (Closed): Add Registration to cdm model
For the Algea-Registry the model needs to be extended by a Registration class (for the detailed discussion see #6044)... Andreas Kohlbecker
11:57 AM Revision 2c4452d9 (taxeditor): ref #4766: remove apply and restore defaults buttons
Katja Luther
11:34 AM Revision 6a3f4c50 (cdmlib): ref #4766: prepair the sortindex updater for calling via IOService
Katja Luther
11:31 AM Revision 1183a87f (taxeditor): ref #4766: sortindex updater integration in admin menu
Katja Luther
11:21 AM feature request #4766: Repair Methods for the cdm instance
we already have update methods for sortindex and titlecache. These functionality needs to be available via the admin ... Katja Luther
08:41 AM bug #6257 (Worksforme): incorrect SNAPSHOT version after HFX release in cdm-vaadin and cdm-webapp
The Jenkins jobs cdm-vaadin-HFX-FINISH and cdm-webapp-HFX-FINISH are missing to set the correct SNAPSHOT version. Thi... Andreas Kohlbecker
 

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