Project

General

Profile

Activity

From 10/10/2016 to 11/08/2016

11/08/2016

04:41 PM bug #6115: protect cdm content by drupal permission
I fixed the above described bug. Please test again.
NOTE: There is a new section in the description on how to test...
Andreas Kohlbecker
04:38 PM bug #6115 (Resolved): protect cdm content by drupal permission
Applied in changeset commit:cdm-dataportal|239c4040ea26be2c36b2344e4aa276f27bee55db. Andreas Kohlbecker
01:34 PM bug #6115: protect cdm content by drupal permission
Andreas Müller wrote:
> Currently the taxon tree is still shown at Flora Malesiana: http://test.e-taxonomy.eu/datapo...
Andreas Kohlbecker
01:15 PM bug #6115: protect cdm content by drupal permission
Currently the taxon tree is still shown at Flora Malesiana: http://test.e-taxonomy.eu/dataportal/preview/flora-malesi... Andreas Müller
12:27 PM bug #6115 (In Progress): protect cdm content by drupal permission
The protection can be by passed by accesing the the content via the drupal node integration. An according check must ... Andreas Kohlbecker
04:37 PM Revision 239c4040 (cdm-dataportal): fix #6115 adding missing permission check to cdm nodes integr...
Andreas Kohlbecker
04:22 PM bug #6186 (Rejected): Drupal nodes are created even if Create drupal nodes is off
cannot reproduce this
I tested this with the following portals in which all CDM nodes have been deleted now:
*...
Andreas Kohlbecker
12:29 PM bug #6186 (Worksforme): Drupal nodes are created even if Create drupal nodes is off
This refers to the setting admin/config/cdm_dataportal/settings#edit-cdm-drupal-node-creation Andreas Kohlbecker
03:07 PM feature request #6041 (In Progress): Change the label of "Set as basionym of homotypical group"
Andreas Müller
02:47 PM feature request #6041: Change the label of "Set as basionym of homotypical group"
Set back to unassigned CDM tickets as first child tickets have to be resolved. Andreas Müller
02:40 PM feature request #6188 (New): Make "Set as basionym of homotypical group" an optional function
See parent ticket. Still needs discussion if this is really wanted. Andreas Müller
02:36 PM feature request #6187 (New): [DISCUSS] Ask W.Greuter about "type providing name"
See parent ticket Andreas Müller
02:32 PM bug #6174 (Closed): LIE when deleting new name
Seems to be fixed Andreas Müller
02:29 PM Revision b22621fd (cdm-vaadin): ref #5458 Avoid possible exception for case sensitive root node c...
Patrick Plitzner
02:23 PM Revision ae5a0d99 (cdmlib): Minor changes to classification clone method
Andreas Müller
02:22 PM Revision 104cc879 (cdmlib): Clean up
Andreas Müller
02:21 PM Revision a6f3a18c (cdmlib): Clean up deprecated methods in name service
Andreas Müller
02:00 PM Revision 9bb42d8a (cdm-vaadin): ref #5458 Fix node retrieval for classification
Patrick Plitzner
01:53 PM Revision bea4aa93 (cdm-vaadin): ref #5458 label for null selection (remove status)
Patrick Plitzner
01:48 PM Revision 8a6e2f9a (cdm-vaadin): ref #5458 Refresh titlecache of named area vocabularies
Patrick Plitzner
01:47 PM Revision f9ea11c9 (cdm-vaadin): ref #5458 Allow one-click selection for status term
Patrick Plitzner
01:45 PM bug #6023 (Closed): configuration problems with maven-antrun-plugin
Seems to work. I also tested the latest build on a machine with java 1.7 installed (pesihpc) and got no problems. Andreas Müller
01:40 PM Revision 82a22019 (cdmlib): Cleanup
Andreas Müller
01:38 PM bug #6176 (Closed): Creating a new Reference throws TOE (TransientObjectException)
Seems to be fixed. I remove target version as it was a temporary regression only. Andreas Müller
01:36 PM feature request #5972: Prevent user from unwanted author and reference updates
It looks like it wokrs only for references until now. But we need it for all objects (if this is difficult, at least ... Andreas Müller
01:34 PM feature request #5972 (Feedback): Prevent user from unwanted author and reference updates
I would change the label to "This reference is referenced by xxx records. The change will take for all these records.... Andreas Müller
12:11 PM bug #5692 (Closed): Delete a person within the bulk editor deletes the person even if not saved
Seems to be fully fixed now. Great. Andreas Müller
12:04 PM bug #5680 (Closed): Out-of-Memory when editing TaxonInteraction
Seems to be fixed. There might be some other such issues. See #3841 Andreas Müller
09:34 AM bug #5680 (Resolved): Out-of-Memory when editing TaxonInteraction
Applied in changeset commit:cdmlib|4b5eb627a4a79b7dfb7588779e1ef566a69c8ecc. Katja Luther
09:33 AM bug #5680: Out-of-Memory when editing TaxonInteraction
The problem was the naming of the getter method for description. It was getDescriptions() but should be getDescriptio... Katja Luther
10:26 AM Revision c9181133 (cdmlib): ref #4866 Set sec reference for taxa when cloning classification
Patrick Plitzner
10:21 AM task #6158: Update EDIT documentation from svn to git
Also generally try to update the site where necessary. E.g. java version is now 1.7 Andreas Müller
10:04 AM Revision 211add74 (taxeditor): smaller changes to display taxon interactions
Katja Luther
10:04 AM Revision 935960dc (taxeditor): ref #6176: the referencingObjectsCount is only called for wizards ...
Katja Luther
09:48 AM Revision a663859a (cdmlib): minor
Katja Luther
09:46 AM Revision aede647b (cdmlib-apps): adapt getDescription() see #5680
Katja Luther
09:42 AM Revision 4b321494 (cdm-vaadin): ref #5458 Fix node retrieval and taxonTree refresh
Patrick Plitzner
09:36 AM bug #6077 (Closed): Import of gathering images
Katja Luther
09:32 AM Revision 205b4b75 (cdmlib): missed to add the adapted test
Katja Luther
09:28 AM Revision 4b5eb627 (cdmlib): fix #5680: get method needs to be named like the attribute
Katja Luther
09:16 AM Revision ba0e4a8c (cdm-vaadin): ref #5458 Allow null selection to remove distribution status
Patrick Plitzner

11/07/2016

01:04 PM Revision 6dd0db6f (cdmlib): switching maven-jetty plugin back to jdk 1.7 compatible version
Andreas Kohlbecker
12:35 PM Revision ef6db0d3 (cdm-vaadin): lowering java target version to 1.7
Andreas Kohlbecker
12:17 PM bug #6023 (Resolved): configuration problems with maven-antrun-plugin
Applied in changeset commit:cdmlib|1ddde622ae10b01976cdb99fb50a469a5506ca7e. Andreas Kohlbecker
12:17 PM bug #6023 (In Progress): configuration problems with maven-antrun-plugin
Andreas Kohlbecker
12:16 PM Revision 1ddde622 (cdmlib): fix #6023 solving compatibility problems of aspectj with java 1.8 and...
Andreas Kohlbecker
11:45 AM Revision 2693d2d2 (cdm-vaadin): fixing startup, dependency problems of jetty
- fixed for eclipse ide
- fixed for maven-jetty plugin
Andreas Kohlbecker
11:45 AM Revision c7bddd78 (cdm-vaadin): gitignore
Andreas Kohlbecker
11:45 AM Revision ca950879 (cdm-vaadin): removing scope provided from launcher
Andreas Kohlbecker
11:45 AM Revision 0cb4f241 (cdm-vaadin): setting vaadin production mode to true - globally
Andreas Kohlbecker
11:45 AM Revision d436d94e (cdm-vaadin): adding developer logging config to ide launcher
Andreas Kohlbecker
11:45 AM Revision ab7b3cd1 (cdm-vaadin): fixing dependency management problems
- letting versions be managed through cdmlib-parent
- depending project on cdmlib-remote
- removing classes clone...
Andreas Kohlbecker
11:45 AM Revision cd760b09 (cdm-vaadin): fixing double servlet mapping
Andreas Kohlbecker
11:45 AM Revision 25c1d6d8 (cdm-vaadin): fixin project setup:
- solving maven warnings
- solving some dependency problems (itextpdf, ...)
- solving dependency probelms with je...
Andreas Kohlbecker
11:45 AM Revision abbbb46c (cdm-vaadin): disabling SuperDev mode which is now on by default
Andreas Kohlbecker
11:45 AM Revision 974ae00d (cdm-vaadin): updating DataSourceConfigurer with new code from cdmlib-remote - ...
Andreas Kohlbecker
11:45 AM Revision 201dfb32 (cdm-vaadin): ref #5862 adding missing dependency to provide missing xsd when o...
Andreas Kohlbecker
11:45 AM Revision 479b0055 (cdm-vaadin): simplifying dependencies in pom.xml (using scope 'compile' where ...
Andreas Kohlbecker
11:28 AM Revision 5a9620a0 (cdmlib): updating maven-jetty plugin
Andreas Kohlbecker
10:43 AM bug #5862: Spring needs online resources during launch
a much better solution is to let the versions be managed through the pom.xml of cdmlib-parent:
~~~xml
<dependen...
Andreas Kohlbecker
10:41 AM bug #5862 (Resolved): Spring needs online resources during launch
Applied in changeset commit:cdmlib-apps|a6c3d024c6c3121786f55c474655f4f1dd2fd2a2. Andreas Kohlbecker
10:41 AM Revision a6c3d024 (cdmlib-apps): fix #5862 by correctly managing dependencies
Andreas Kohlbecker
10:31 AM Revision dd998643 (cdmlib-apps): managing cdmlib dependencies
Andreas Kohlbecker
09:52 AM Revision 96661f94 (cdmlib): smaller changes for abcd import
Katja Luther
09:51 AM Revision 2704bbc5 (cdmlib): revert adding error log
Katja Luther
09:43 AM Revision 3522e0b1 (cdmlib): minor
Katja Luther
09:42 AM Revision 57089e91 (cdmlib): minor
Katja Luther
09:33 AM Revision ce790c77 (cdmlib): ref #6166: import siblings if an specimen and smaller changes in ABCD
import Katja Luther

11/06/2016

02:22 PM Revision 66e8ec64 (cdmlib): ref #4866 Fix transient object exception
- fixed typo Patrick Plitzner
02:21 PM Revision 5d3fd02f (taxeditor): ref #4867 Implement "Clone Classification" functionality
- availabel via context menu in taxon navigator
- parameters available: classification name, taxon relation from clo...
Patrick Plitzner
01:00 PM Revision 355c89cb (cdmlib): ref #4866 First implementation for clone classification (including test)
Patrick Plitzner
01:00 PM Revision 7d8eced5 (cdmlib): ref #4866 Test for first implementation for clone classification
Patrick Plitzner
01:00 PM Revision 7e313273 (cdmlib): ref #4866 Create new description set when cloning taxon (avoid
HibernateException) Patrick Plitzner
01:00 PM Revision cea52158 (cdmlib): ref #5449 Imporvements for CSV export
- Fix initialization problems
- Correctly match taxon name to chosen classification
- allow export for single leaf ...
Patrick Plitzner

11/04/2016

11:20 PM Revision 1925e9f2 (cdm-vaadin): ref #5974 Fix synonymRelationship issues in vaadin
Andreas Müller
05:01 PM Revision 35b0416a (cdmlib): adapt gestGetUuidAndTitleCache data to new model
Andreas Müller
04:19 PM Revision f35df403 (cdmlib-apps): change the versions to 4.4
Katja Luther
04:12 PM Revision 4bcc0c85 (cdmlib): fix compile error in ITaxonNodeService
Andreas Müller
03:04 PM Revision b811f6b1 (cdm-vaadin): cleanup
Andreas Müller
02:48 PM Revision 3df95930 (cdm-vaadin): Update test H2 in vaadin to new model
Andreas Müller
02:47 PM Revision 47936c60 (cdm-vaadin): ref #5974 remove synonym relationship and other model changes
Andreas Müller
02:36 PM Revision e82b27f2 (cdm-vaadin): cleanup
Andreas Müller
02:09 PM Revision 0e522f9f (cdm-vaadin): ref #5974 Remove synonym relationships
Andreas Müller
02:08 PM Revision 4b6abd7e (cdmlib): Merge branch 'develop' of ssh://dev.e-taxonomy.eu/var/git/cdmlib into...
Conflicts:
cdmlib-services/src/main/java/eu/etaxonomy/cdm/api/service/ITaxonNodeService.java
Andreas Müller
12:42 PM bug #5862 (In Progress): Spring needs online resources during launch
This can be solved by adding the spring dependency which provides the missing xsd file in the jar.
I fixed this fo...
Andreas Kohlbecker
09:25 AM bug #5692 (Resolved): Delete a person within the bulk editor deletes the person even if not saved
The transient objects can be deleted now without exception see #6175 Katja Luther
09:23 AM bug #6159: improve distribution editor in TaxEditor
@AM and @Patrick
please have a look if this is ok for next week.
Katja Luther
09:19 AM bug #6176 (Resolved): Creating a new Reference throws TOE (TransientObjectException)
Katja Luther
09:19 AM bug #6176: Creating a new Reference throws TOE (TransientObjectException)
Andreas Müller wrote:
> Sorry, I think I have to reopen this ticket for a general question.
>
> I do not understa...
Katja Luther

11/03/2016

04:58 PM bug #6175 (Closed): Exception when deleting transient object
Seems to work now. Remove target version as this issue was only a temporary regression. Fixed in v4.4 snapshot Andreas Müller
02:19 PM bug #6175: Exception when deleting transient object
Applied in changeset commit:taxeditor|734218f995535b1920b9feb5eab9e91141e0c536. Katja Luther
02:18 PM bug #6175 (Resolved): Exception when deleting transient object
This was related to the last change in the bulk editor that the objects which should be deleted are marked as deleted... Katja Luther
09:34 AM bug #6175: Exception when deleting transient object
I think that this is not related to the getReletatedObjectsCount problem. This was easily fixed by checking if the en... Katja Luther
04:47 PM bug #5870 (Closed): NPE when trying to open a synonym (or taxon) that has been deleted
Andreas Müller
04:42 PM bug #6122 (Feedback): add titleCache service
There still seems to be an issue as the result for cuba classification on test is empty: http://test.e-taxonomy.eu:80... Andreas Müller
04:35 PM bug #6122: add titleCache service
Please review Andreas Müller
04:39 PM bug #6180 (Rejected): NoSuchMethodException: getUuidAndTitleCacheTaxon on attempt to add taxon to...
In deed I was using an incompatible editor Andreas Kohlbecker
01:02 PM bug #6180 (Resolved): NoSuchMethodException: getUuidAndTitleCacheTaxon on attempt to add taxon to...
This is probably a version issue as otherwise a compilation error should occur. Please check. Andreas Müller
12:22 PM bug #6180 (Rejected): NoSuchMethodException: getUuidAndTitleCacheTaxon on attempt to add taxon to...
To reprododuce:
* data source http://test.e-taxonomy.eu/cdmserver/phycobase/
1. Create new description for any ...
Andreas Kohlbecker
04:30 PM bug #6129 (Closed): After creating a new Reference in selection dialog, it could not be found in ...
Andreas Müller
03:57 PM bug #6129: After creating a new Reference in selection dialog, it could not be found in the selec...
Seems to work now. Andreas Müller
04:18 PM bug #6176 (Feedback): Creating a new Reference throws TOE (TransientObjectException)
Sorry, I think I have to reopen this ticket for a general question.
I do not understand why the "getReferencingObj...
Andreas Müller
04:09 PM bug #6176 (Closed): Creating a new Reference throws TOE (TransientObjectException)
Seems to be fixed. As it was only a temporary regression within v4.4 snapshot caused by #5972 I remove the target ver... Andreas Müller
09:39 AM bug #6176: Creating a new Reference throws TOE (TransientObjectException)
added a check for the id to confirm whether the entitiy is new or not. This fixed the problem. Katja Luther
09:38 AM bug #6176 (Resolved): Creating a new Reference throws TOE (TransientObjectException)
Applied in changeset commit:taxeditor|384b41bd24d4ca11f044bb6cce1f8fc5845e621c. Katja Luther
04:05 PM bug #6178 (Duplicate): TOE Exception when creating a new Reference
Looks like this was fixed together with #6178. As it was only a temporary regression within v4.4 snapshot I remove th... Andreas Müller
03:46 PM feature request #5972 (Resolved): Prevent user from unwanted author and reference updates
Andreas Müller
03:44 PM bug #6181: Deleting a misapplied name does not set the dirty flag
So this is an other issue for our save strategy ticket (please link). Because this is unclear for the user who expect... Andreas Müller
03:03 PM bug #6181: Deleting a misapplied name does not set the dirty flag
That is correct because it is already persisted to the DB. This is because the deletion of the misapplied name is a s... Katja Luther
02:57 PM bug #6181 (New): Deleting a misapplied name does not set the dirty flag
This happens in NameEditor.
Found in v4.4 snapshot.
Andreas Müller
03:32 PM bug #5948 (Closed): supress protologue icon if according media uri is missing
Seems to be fixed. I only found a related Editor issue #6182. Andreas Müller
03:30 PM bug #6182 (New): Emptying protolog URI does not work
The protolog URI field can not be fully emptied but only deleted.
If you empty the protolog field and save this no...
Andreas Müller
02:48 PM bug #5676 (Feedback): Sensu does not show up if no author exists for secundum reference
This seems to work fine now.
The only open question is "Also I wonder if it is wanted behavior, that the publicati...
Andreas Müller
02:41 PM Revision 08a29cf3 (taxeditor): the pattern for new created nomenclatural references with nomencla...
Katja Luther
02:19 PM bug #6174 (Resolved): LIE when deleting new name
Applied in changeset commit:cdmlib|645658b9cc716e53f2a6ccf1d8d200c771c1a4c6. Katja Luther
02:09 PM bug #6174: LIE when deleting new name
this is fixed by changing the args of isDeletable to UUID. Katja Luther
09:30 AM bug #6174: LIE when deleting new name
the original exception is :
~~~ text
org.hibernate.LazyInitializationException: failed to lazily initialize a col...
Katja Luther
02:19 PM Revision 734218f9 (taxeditor): fix #6175: transient objects are not marked as deleted in bulk edi...
Katja Luther
02:04 PM Revision 645658b9 (cdmlib): fix #6174: isDeletable needs to be called with UUID and the objects is
loaded on server side Katja Luther
10:12 AM Revision 87f819cf (cdmlib): ref #5458 Add classification filter to service method
Patrick Plitzner
10:12 AM Revision e8a3d3c8 (cdm-vaadin): ref #5458 Fix potential SQL query syntax exception
Patrick Plitzner
09:52 AM Revision a4f62469 (taxeditor): add a new DeleteMediaConfiguratorComposite
Katja Luther
09:49 AM Revision 6fe75af3 (cdmlib): fix media deletion
Katja Luther
09:43 AM bug #6179 (New): Use @RestController where appropriate

a good summary : https://dzone.com/articles/spring-framework-restcontroller-vs-controller?edition=237194&utm_source...
Andreas Kohlbecker
09:41 AM bug #5692: Delete a person within the bulk editor deletes the person even if not saved
The media bulk editor is fixed now see Revision f1a1a089. The problem of deleting a transient object still exists. Katja Luther
09:40 AM Revision f1a1a089 (taxeditor): fix the deletion of media in bulk editor
Katja Luther
09:37 AM Revision 384b41bd (taxeditor): fix #6176: check if entity is new
Katja Luther

11/02/2016

11:52 PM bug #6176: Creating a new Reference throws TOE (TransientObjectException)
This is very similar to #6178 (but not exactly a duplicate I guess) Andreas Müller
05:14 PM bug #6176 (Closed): Creating a new Reference throws TOE (TransientObjectException)
What I did:
* Open reference bulk editor
* Create a new Reference via "new", e.g. "Test Reference" (Generic)
* W...
Andreas Müller
11:51 PM bug #6178: TOE Exception when creating a new Reference
This issue is very similar to #6176 (but not exactly a duplicate I guess) Andreas Müller
11:48 PM bug #6178 (Duplicate): TOE Exception when creating a new Reference
I tried to add a new nomencl. reference via "Create a new Reference in Reference selection dialog.
This caused the f...
Andreas Müller
08:28 PM feature request #6058 (Feedback): Store NamedArea dialog filters more individually
All Area lists like (geoscope in classification or PolytomousKey) seem to handle "Add" and "Edit" differently which d... Andreas Müller
07:34 PM feature request #5891 (Closed): Taxon appended phrase should not allow empty string
Fixed Andreas Müller
07:09 PM bug #5888 (Closed): Deleting factual data does not work (dirty flag not set)
Seems to work Andreas Müller
06:31 PM bug #5800 (Closed): Remove "Taxonomically Included In" from list of concept relationship types
Seems to work. There is a related issue #6177. Andreas Müller
06:30 PM bug #6177 (New): Taxon Concept relationship type not editable in details view
For some reason the Relationship Type field in the Taxon Concept relationship details view is not editable.
I can't ...
Andreas Müller
06:01 PM bug #5692: Delete a person within the bulk editor deletes the person even if not saved
While testing I found 3 other issues that might be related. #6174, #6175, #6176. Please check if they are regressions... Andreas Müller
06:00 PM bug #5692 (Feedback): Delete a person within the bulk editor deletes the person even if not saved
Looks like Media bulk editor is not yet fixed! All others seem to work. Andreas Müller
04:01 PM Revision ad0d2649 (cdm-vaadin): ref #5458 Notify user when taxon tree is loading
Patrick Plitzner
03:15 PM bug #6175 (Closed): Exception when deleting transient object
What I did
* Open bulk editor (name or agent)
* Run a search (with >0 results)
* Create a new record
* Immediat...
Andreas Müller
03:05 PM bug #6174: LIE when deleting new name
It looks like the error does not happen always. So please play around a bit, also with different order for save, sear... Andreas Müller
02:54 PM bug #6174 (Closed): LIE when deleting new name
What I did:
* Open name bulk editor
* Create new name (e.g. Testus species)
* Save
* Search for Testus*
* Dele...
Andreas Müller
02:01 PM bug #6165 (Rejected): distributionInfoFor service no longer respects the statsusColors parameter
This issue is a data issue related to merges of presence absence terms (#5778). The hardcoded colors have been change... Andreas Müller
12:40 PM Revision 246e313b (cdm-vaadin): ref #5458 Clear caches when re-initializing table view
Patrick Plitzner
12:04 PM Revision f5b90187 (cdm-vaadin): ref #5458 Performance and usability
- avoid re-initialization of distribution settings
- removed Save button
Patrick Plitzner
09:19 AM Revision 787028b1 (cdm-vaadin): ref #5458 Fix some intitialization problems
Patrick Plitzner

11/01/2016

04:41 PM Revision 4103187a (cdmlib): ref #5458 Added find-by-titleCache method for taxon node service
Patrick Plitzner
03:50 PM Revision f9517a12 (cdm-vaadin): ref #5458 Add taxon filter to distribution settings
Patrick Plitzner
02:17 PM feature request #5970: Implement allowOverride in CdmPreference
Katja Luther wrote:
> we also need to update the databases, do you have to include it into your update script alread...
Andreas Müller
01:04 PM feature request #5970 (Feedback): Implement allowOverride in CdmPreference
we also need to update the databases, do you have to include it into your update script already? Katja Luther
02:00 PM Revision 4a72ff97 (cdm-vaadin): ref #5458 Improve performance for taxon tree in settings dialog
- more efficient caching Patrick Plitzner
01:31 PM bug #5800 (Resolved): Remove "Taxonomically Included In" from list of concept relationship types
Applied in changeset commit:taxeditor|a368dac3747c8f43872f78f3ef83bd7ac69007d3. Katja Luther
01:31 PM Revision a368dac3 (taxeditor): fix #5800: remove taxonomically included from menu
Katja Luther
01:17 PM bug #5870 (Resolved): NPE when trying to open a synonym (or taxon) that has been deleted
This is already solved, the message is that the cdm entity could not be found in the database Katja Luther
01:06 PM feature request #5971 (In Progress): Implement database wide CdmPreference writing
Now it is implemented on editor side, we need the update of the CdmPreference table (allowOverride) to complete it (s... Katja Luther
01:03 PM Revision 9d8df0cf (taxeditor): ref #5971: don't allow to edit local nomenclatural code if allowO...
Katja Luther
12:41 PM Revision b7bfcde7 (taxeditor): ref #5971: minor
Katja Luther
12:16 PM Revision be140ab3 (taxeditor): ref #5971: add an admin page to the prefs and add cdm pref nomencl...
Katja Luther
10:02 AM bug #5660 (Closed): Rename Name Relationship to Name Relationships in Name Details View
close this ticket because it does not need a review. Katja Luther
10:01 AM bug #5660 (Resolved): Rename Name Relationship to Name Relationships in Name Details View
Applied in changeset commit:taxeditor|62d710d7f41510465bbfe9f1c82bcf0ac86b3d7a. Katja Luther
10:01 AM Revision 62d710d7 (taxeditor): fix #5660: rename Name Relationship to Name Relationships
Katja Luther

10/31/2016

04:46 PM bug #5693 (Resolved): Deleting a synonym only deletes the synonym relation
I need to check this also against the new synonym implementation in CDM model. Andreas Müller
04:41 PM bug #6160 (Feedback): Add preservation method and stage as sub class to DefinedTerm
Andreas Müller
04:40 PM bug #6160: Add preservation method and stage as sub class to DefinedTerm
I do not understand this. Classes are not meant to distinguish semantics of defined terms. This is what TermType enum... Andreas Müller

10/28/2016

10:34 AM Revision 5aa29971 (cdmlib): abcd import: association type living culture is a parent child relation
Katja Luther
10:31 AM Revision d0216fc5 (taxeditor): minor
Katja Luther
10:10 AM feature request #6170 (New): Selfregistration widget
The selfregistration widget will allow users to create a user account without interaction with a user manager.
For...
Andreas Kohlbecker
09:00 AM Revision 759b48f8 (cdm-vaadin): Revert "fixing mvn dependencies to fix test setup for jetty launc...
This reverts commit d111e4ee89477f3f5a71d8965a8d95d9d564ea9f. Andreas Kohlbecker

10/27/2016

07:31 PM Revision 4f39e7d4 (taxeditor): CDMSequenceMatrixAdapter now exports sequence metadata.
Ben Stöver
06:07 PM Revision d111e4ee (cdm-vaadin): fixing mvn dependencies to fix test setup for jetty launcher
Andreas Kohlbecker
05:49 PM Revision e2f3badb (cdm-vaadin): adding new launcher for eclipse Jetty Integration
Andreas Kohlbecker
03:55 PM Revision 95857d53 (taxeditor): Bug fix: CDMSequenceMatrixAdapter now does not create CharacterSet...
Ben Stöver
11:24 AM Revision 2e52d3ee (cdm-vaadin): ref #5458 Changed URI for distribution and concept editor
Patrick Plitzner
11:19 AM Revision b5f17980 (cdm-vaadin): ref #5458 Fix exception for non-unique column ids
Patrick Plitzner
08:50 AM Revision c15014c2 (taxeditor): Add key listener to remote login dialog
- pressing enter in the password field or selecting the connect button
with the keyboard only will now also connect
Patrick Plitzner

10/26/2016

05:31 PM Revision ba1551d6 (taxeditor): Merge branch 'LibrAlign' of ssh://dev.e-taxonomy.eu/var/git/taxedi...
Ben Stöver
05:31 PM Revision c80496ea (taxeditor): Merge branch 'LibrAlign' of https://dev.e-taxonomy.eu/git/taxedito...
# Conflicts:
# eu.etaxonomy.taxeditor.molecular.lib/.classpath
# eu.etaxonomy.taxeditor/rcp.target
Ben Stöver
04:08 PM Revision 8f1d102f (cdm-vaadin): ref #5458 Fix class cast exception
Patrick Plitzner
04:02 PM Revision 44123d65 (cdm-vaadin): ref #5458 Sort named areas
Patrick Plitzner
03:54 PM Revision f957f84d (taxeditor): change herbarium to collection
Katja Luther
03:23 PM Revision f8b0de79 (cdm-vaadin): ref #5458 Fix item initialization problems
Patrick Plitzner
02:56 PM Revision fe7f0131 (cdm-vaadin): ref #5458 Use service based on UuidAndTitleCache to build taxon tree
Patrick Plitzner
02:31 PM feature request #6166 (Closed): In ABCD import also import all siblings of a culture or tissue sa...
actually we only get the associated units of an unit, but for a derivate of a culture or a tissue sample we also want... Katja Luther
11:09 AM Revision 100e37d9 (cdmlib): ref #2380 Implement service for getting parent of
UuidAndTitleCache<TaxonNode>
- parent of either ITaxonTree or UuidAndTitleCache<TaxonNode>
can be retrieved
- adde...
Patrick Plitzner
10:20 AM bug #6165 (Rejected): distributionInfoFor service no longer respects the statsusColors parameter
The below request includes the statusColors parameter:
http://api.cybertaxonomy.org/cyprus/portal/description/dist...
Andreas Kohlbecker
10:05 AM Revision 0f1f1072 (taxeditor): Merge branch 'develop' into LibrAlign
Patrick Plitzner
10:04 AM Revision 63892e70 (taxeditor): Add spring oauth2 dependency
Patrick Plitzner

10/25/2016

04:55 PM feature request #2380: TaxonNavigator should work with DTO objects instead of full blown cdm inst...
Andreas Müller wrote:
> I guess this is was done long time. Can you please check.
The taxon navigator still uses ...
Patrick Plitzner
04:52 PM Revision 321a37d1 (cdmlib): ref #2380 Implement service for getting children of
UuidAndTitleCache<TaxonNode>
- direct children of either ITaxonTree or UuidAndTitleCache<TaxonNode>
can be retrieve...
Patrick Plitzner
02:54 PM task #6005 (Rejected): Create subprojects of EDIT platform components
We have discussed the idea of using subprojects for the EDIT platform components and have decided against this.
Clos...
Andreas Kohlbecker
12:09 PM bug #6164 (New): cyprus: invalid data causing crash in modifier editor
Adding a new Modifier vocabulary to the cyprus database causes an exception on save (stack trace below).
This is p...
Andreas Kohlbecker
10:43 AM bug #6163: can't add media to observation/specimen anymore
As a first step, I activated the possibility to add media to occurence data in the bulk editor. Katja Luther
10:08 AM bug #6163 (New): can't add media to observation/specimen anymore
Use case: entering an observation with image
Problems: can't choose "Observation" when using the new Specimen Expl...
Gabriele Dröge
10:42 AM Revision b04853ae (taxeditor): ref #6163: in occurence bulk editor it is possible to add media
Katja Luther
10:05 AM feature request #6162 (New): Implement "Forgot your password?" button in the Taxeditor connect di...
This is a successor of #6161 Andreas Kohlbecker
09:58 AM feature request #6161 (New): Service and webservice to recover forgotten passwords
The password recovery function allows users to request for a password recovery link which is send to the user via ema... Andreas Kohlbecker

10/24/2016

05:30 PM bug #6088: New reproducable multiple representations exception for name relationships
I found another way to reproduce this:

1. Open taxon in name editor
1. Add a new name relation (do NOT save)
...
Patrick Plitzner
05:00 PM feature request #1362 (Rejected): Version number should be located at one place
The version number of the TaxEditor is located at one place (except the version number in plugin.xml of each plugin) ... Patrick Plitzner
02:30 PM bug #5693 (Closed): Deleting a synonym only deletes the synonym relation
This is solved with commit:08a698afd5a98944fb4558599fc04dc24282a51a Katja Luther
02:14 PM feature request #5972 (In Progress): Prevent user from unwanted author and reference updates
@AM Please have a look whether the message is ok or if it should be bigger or other text... Katja Luther
02:11 PM Revision 84269784 (taxeditor): ref #5972: the wizard warns the user if the reference is used ssom...
Katja Luther
01:47 PM feature request #3573 (Resolved): Improve EDITOR import UI configuration panel
Applied in changeset commit:taxeditor|3c066c3d21e5c32b5afd0dc5f673ea91fa07c3b4. Patrick Plitzner
01:47 PM Revision 3c066c3d (taxeditor): fix #3573 Add non-generic configurator page to ABCD import wizard
Patrick Plitzner
01:36 PM Revision c0c46413 (taxeditor): #ref #5496 Do not show any terms for preservation method and stage
preferences Patrick Plitzner
01:29 PM bug #6160 (Rejected): Add preservation method and stage as sub class to DefinedTerm
We need this in order to filter correctly when displaying all available terms Patrick Plitzner
01:07 PM bug #6159: improve distribution editor in TaxEditor
improve the selection of distribution areas in preferences and fix some smaller issues in the distribution editor its... Katja Luther
11:15 AM bug #6159 (Closed): improve distribution editor in TaxEditor
Improving the distribution editor and selection of areas used in distribution editor
we should handle the saving s...
Katja Luther
01:05 PM Revision 8407c42c (taxeditor): ref #6159: fix that some column show no data
Katja Luther
01:05 PM Revision e45ed4d5 (taxeditor): ref #6159: minor
Katja Luther
01:02 PM Revision 91cdf81a (cdmlib): fix #4453 Enhance portal visualization of molecular data
- used DefinedTerm constants for UUIDS
- used titleCache for all DerivedUnits
- move string representations to po...
Patrick Plitzner
01:02 PM Revision 2c23b054 (cdm-dataportal): fix #4453 Enhance portal visualization of molecular data
- used DefinedTerm constants for UUIDS
- used titleCache for all DerivedUnits
- move string representations to po...
Patrick Plitzner
01:01 PM Revision 876be37d (cdmlib): add test for ermIdInVocabularyComparator
Katja Luther
12:54 PM Revision e111542f (cdmlib): fix TermIdInVocabularyComparator
Katja Luther
12:35 PM Revision 102e44cd (taxeditor): Fix potential NPE
Patrick Plitzner
10:33 AM Revision 0de43613 (cdmlib): move taxonnode needs to save old parent and child node
Katja Luther
10:20 AM task #6158 (Closed): Update EDIT documentation from svn to git
the documentation stills refers to the old svn repositories. We should change this to git and also link to git develo... Patrick Plitzner
09:27 AM Revision c6476daa (taxeditor): Merge branch 'develop' into LibrAlign
# Conflicts:
# eu.etaxonomy.taxeditor.molecular.lib/.classpath
Patrick Plitzner

10/22/2016

02:36 PM Revision c37c8506 (taxeditor): Plugin molecular.lib refactored to use direct project dependencies...
Adjustments to recent changes in JPhyloIO. Ben Stöver

10/21/2016

05:48 PM Revision 9278d6a7 (cdm-dataportal): solving autoscroll problems in taxon tree
Andreas Kohlbecker
04:45 PM Revision 6de6d849 (cdmlib): Improve taxon delete test
Andreas Müller
04:45 PM Revision 15566c6f (cdmlib): ref #5974 implement substitute method for TaxonService.getAllRelation...
Andreas Müller
04:41 PM Revision fd469b65 (cdmlib): update path to dataset.xsd in persistence test data
Andreas Müller
04:02 PM bug #6157 (New): Consider implementing quick setup button "Quick Singlepage Configuration'"
More an more portal are configured with tabless taxonpages. A specific setup is required for this to look pleasant
...
Andreas Kohlbecker
02:54 PM Revision 22eb2e66 (cdmlib-apps): fix localH2 username in eFlora
Andreas Müller
02:52 PM Revision f4682883 (cdmlib-apps): ref #3925 fix excluded flag for Cuba
Andreas Müller
02:50 PM Revision 23f817ca (cdmlib-apps): Cleanup and gitignore in app-import
Andreas Müller
02:48 PM Revision 4688a314 (cdmlib-apps): Cleanup app-import test data
Andreas Müller
02:47 PM Revision 42ae65a2 (cdmlib): Cleanup merge model 4.1/develop
Andreas Müller
02:26 PM Revision 4e14e4cb (cdmlib): Merge remote-tracking branch 'origin/develop' into develop
Andreas Müller
02:20 PM Revision a8b0ad5f (cdmlib): ref #5972: add service method to get count of referencing objects
Katja Luther
12:06 PM Revision 0842c388 (cdmlib): enabling http POST for a couple of name catalogue controller methods
Andreas Kohlbecker
11:48 AM feature request #5616: Add the"Open in..." menu to taxon search
Katja Luther wrote:
> The problem seems to be in the calculation of the orphan value. A taxon is only orphaned when ...
Andreas Müller
10:09 AM feature request #5616: Add the"Open in..." menu to taxon search
The problem seems to be in the calculation of the orphan value. A taxon is only orphaned when it is not used in a cla... Katja Luther
10:13 AM bug #6129: After creating a new Reference in selection dialog, it could not be found in the selec...
please have a look, if everything works as expected now. Katja Luther
08:43 AM Revision 41f187f1 (cdm-vaadin): ref #5458 Validation for settings dialogs
Patrick Plitzner
08:04 AM Revision 073d62ba (cdm-vaadin): ref #5458 Refactor SQLException handling
Patrick Plitzner
07:48 AM Revision 58dba687 (cdm-vaadin): ref #6131 Refactor settings dialog
- extracted abstract class
- set style for OK/Cancel button
Patrick Plitzner

10/20/2016

05:55 PM Revision 54d20fb4 (cdm-vaadin): ref #5458 Remove generated scss files and add them to .gitignore
Patrick Plitzner
05:10 PM feature request #6058 (Resolved): Store NamedArea dialog filters more individually
Patrick Plitzner
05:09 PM Revision be719c48 (taxeditor): ref #6058 store named area filters more individually
Patrick Plitzner
04:04 PM Revision 4dea3eee (cdmlib): Merge remote-tracking branch 'origin/develop' into develop
Conflicts:
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/taxon/TaxonNode.java
cdmlib-persistence/src/main/java/...
Andreas Müller
03:59 PM feature request #5616: Add the"Open in..." menu to taxon search
Andreas Müller wrote:
> The first issue seems to be fixed.
>
> Handling of orphaned taxa still does not work (nei...
Patrick Plitzner
03:45 PM bug #6101 (Closed): NPE when having multiple lanugage support disabled
Patrick Plitzner
03:20 PM Revision 2a495461 (taxeditor): Removed p6spy from classpath
Patrick Plitzner
03:00 PM Revision b30beda3 (taxeditor): minor changes for name details view configuration
Katja Luther
02:26 PM Revision f32ec72f (taxeditor): add the nameDetails configuration
Katja Luther
02:13 PM Revision 924c6e0a (taxeditor): minor
Katja Luther
01:59 PM bug #6138 (Closed): fix test testNoRecursiveChangeEvents() in DerivedUnitFacadeTest
this test fails with
~~~ text
Caused by: org.h2.jdbc.JdbcSQLException: Eindeutiger Index oder Primärschlüssel ve...
Katja Luther
01:55 PM feature request #6050 (New): provide the possibility to choose the fields of the simple details v...
the configuration is implemented now, please have a look, if it is ok or if more fields should be configurable. Katja Luther
01:55 PM feature request #6050 (Resolved): provide the possibility to choose the fields of the simple deta...
Applied in changeset commit:taxeditor|76b874f88b5e44d9cf572760d39fecad6a99cdf7. Katja Luther
01:55 PM Revision 76b874f8 (taxeditor): fix #6050: add the possibility to configure which fields should be...
Katja Luther
01:04 PM Revision 7ae4f425 (cdmlib): childNode needs to be saved in TestService to fix the editor test
Katja Luther
12:56 PM Revision 78587134 (taxeditor): fix test
Katja Luther
12:11 PM Revision 3a1af46b (cdmlib): set test to ignore, create ticket to fix this.
Katja Luther
12:10 PM Revision 1a9b03bb (cdmlib): fix failing test
Katja Luther
11:44 AM Revision 7ae6b88e (cdmlib): minor
Katja Luther

10/19/2016

09:50 PM task #6137 (In Progress): Urgent imports

E+M (July 18)
Edaphobase (remaining issues and descriptive data #6537)
Tropicos Import #6965 (20.11.2017)
...
Andreas Müller
08:44 PM bug #6136 (New): Implement type providing name in homotypical group
For discussion see #6041.
Still need to decide if this is really the best solution.
Ask Greuther.
Is there alwa...
Andreas Müller
07:14 PM task #6135 (Closed): Remove authors from Taxonomische Großgruppe
... or make it configurable
Taxonomische Großgruppe
* Autorenschaft soll da nicht angezeigt werden
Was meint...
Andreas Müller
07:13 PM feature request #6134 (Closed): Allow grouping by Taxonomische Großgruppe
- Ja, wir brauchen auch eine Gruppierung nach den Taxonomischen Gruppen wie von dir beschrieben.
OK, versuche ich e...
Andreas Müller
06:48 PM feature request #6128: Include authorship in taxon search web service
SL: Bis jetzt haben wir einfach angenommen, dass alles, was angezeigt wird, auch durchsuchbar ist. Wir brauchen diese... Andreas Müller
12:18 PM Revision 5c8b52af (cdm-vaadin): ref #5458 Add property formatting for distribution table
Patrick Plitzner

10/18/2016

07:51 PM Revision c872e418 (cdmlib): Merge remote-tracking branch 'origin/cdm-4.1' into develop
Andreas Müller
07:50 PM Revision 904c8661 (cdmlib): minor
Andreas Müller
07:31 PM Revision b72cb56a (cdmlib): remaining merge issue for morge develop to cdm4.1
Andreas Müller
06:52 PM Revision aabd8c12 (cdmlib): Merge remote-tracking branch 'origin/develop' into cdm-4.1
Conflicts:
cdmlib-db/pom.xml
cdmlib-ext/pom.xml
cdmlib-io/pom.xml
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/exc...
Andreas Müller
06:45 PM Revision d196eb4d (cdm-vaadin): ref #5458 Usability and UI tweaks
Patrick Plitzner
06:40 PM bug #6129 (Resolved): After creating a new Reference in selection dialog, it could not be found i...
Applied in changeset commit:taxeditor|5a8a1f1453f51d9a99421a6d137f707c266a08b7. Katja Luther
06:40 PM feature request #5891 (Resolved): Taxon appended phrase should not allow empty string
Applied in changeset commit:taxeditor|ceaa3fed461d7c19d3fc124917b4bbfeb35d3f36. Katja Luther
06:40 PM Revision 8f8aae13 (cdm-dataportal): whitespace
Andreas Kohlbecker
06:38 PM Revision e8d43aef (cdm-dataportal): whitespace
Andreas Kohlbecker
06:36 PM feature request #5974 (Resolved): Remove synonym relationships
Applied in changeset commit:cdmlib|d7fa3e131995dd5543514aa3afd71fdd31b59bf5. Andreas Müller
06:36 PM feature request #5634: Excluded note for excluded taxa /taxon nodes
Applied in changeset commit:cdmlib|1e55f5c2544860c52cea161e4edcff5ef2e1bbfa. Andreas Müller
05:45 PM feature request #5634 (Resolved): Excluded note for excluded taxa /taxon nodes
Andreas Müller
06:36 PM feature request #5952: Second cache field for specimen (identityCache)
Applied in changeset commit:cdmlib|7e03e21e1ae317b2fc610adf44deabb82083a083. Andreas Müller
05:57 PM Revision b8e7047b (cdm-vaadin): ref #5458 Performance increase for taxon node selection
- by using SqlContainer the nodes are lazily loaded
- child nodes are loaded via a second SQL query which is filtere...
Patrick Plitzner
05:55 PM Revision a8118bab (cdm-vaadin): ref #5458 remove distribution selection view
Patrick Plitzner
05:52 PM Revision 84f54e17 (cdmlib): update remote-webapp test H2 to model 4.1
Andreas Müller
05:51 PM Revision 1e55f5c2 (cdmlib): fix #5634 Update excluded/unplaced for TaxonNodes with no taxon_id
Andreas Müller
05:17 PM Revision c3c1740f (cdmlib): minor
Andreas Müller
04:53 PM Revision d7fa3e13 (cdmlib): fix #5974 fix moving synonym type to TaxonBase and SynonymRelationTyp...
Andreas Müller
04:07 PM Revision e0af1680 (cdmlib): fix clone test for Media
Andreas Müller
04:00 PM Revision ced4a690 (cdmlib): remove final from classification.description
Andreas Müller
03:58 PM Revision c10a757f (cdmlib): minor
Andreas Müller
03:58 PM Revision 8e6c53f9 (cdmlib): ref #5634 fix clone issue for excludedNote
Andreas Müller
03:57 PM Revision 4cf3d32a (cdmlib): Cleanup language string handling and cloning
Andreas Müller
02:16 PM Revision 33b908b7 (cdmlib): minor
Andreas Müller
02:15 PM Revision b362a2c0 (cdmlib): ref #5952 Add index to identityCache
Andreas Müller
02:14 PM Revision 3f43c155 (cdmlib): cleanup
Andreas Müller
02:13 PM Revision 4bfde47a (cdmlib): ref #3658 further improvements for NomCode update
Andreas Müller
02:11 PM Revision 45c1a780 (cdmlib): #5634 Add excludedNote to TaxonNode (still some tests not running)
Andreas Müller
02:07 PM Revision 1402e210 (cdmlib): ref #3925 Adapt tests for moving unplaced and excluded
Andreas Müller
11:13 AM Revision c2f0001b (taxeditor): ref #6050: test git/redmine and add the pref keys for configurable...
Katja Luther
10:37 AM Revision 3b0bc0db (cdm-vaadin): ref #5458 performance tweak for distribution status selection
Patrick Plitzner
10:29 AM Revision 08a698af (cdmlib): ref #6099: removing cascading to child nodes and adapting the service...
Katja Luther
10:28 AM bug #6099: Duration of save is increasing
to reduce the saving time we removed the cascading to the child taxa.
please test the editor, if everything works as...
Katja Luther
09:59 AM Revision 88b1995d (cdmlib): ref #5431: the type designation blocks the name deletion only if it i...
Katja Luther
09:20 AM bug #6120 (Closed): Cleanup uuidAndTitleCache methods
tested all selection dialogs where it is used and it seems to work. Katja Luther

10/17/2016

06:18 PM bug #6131 (Closed): Vaadin DistributionEditor TODOS
- ~~ok/cancel button in settings window -> same min width~~
- ~~if only 1 classification -> autoselect~~
- ~~NPE wh...
Patrick Plitzner
05:32 PM bug #6130: Areafilter widget broken
Typing in the text field is no longer filtering the selection of areas Andreas Kohlbecker
05:30 PM bug #6130 (Closed): Areafilter widget broken
This is a regression which might have been introduced while solving #6087 Andreas Kohlbecker
05:25 PM Revision e11ccba6 (cdm-vaadin): ref #5458 UI tweak for settings window
Patrick Plitzner
01:31 PM Revision 32bf574c (cdm-vaadin): ref #5458 Add support for setting distribution status filter in s...
Patrick Plitzner
01:30 PM Revision bd46f97b (cdm-vaadin): ref #5458 Fix potential NPE
Patrick Plitzner
01:15 PM Revision 5a8a1f14 (taxeditor): fix #6129: remove additional authorstring in selection dialog sear...
Katja Luther
01:13 PM bug #6129: After creating a new Reference in selection dialog, it could not be found in the selec...
This is because the search pattern is created out of the abbrevTitleCache concatinated with the authorstring.
Removi...
Katja Luther
01:10 PM bug #6129 (Closed): After creating a new Reference in selection dialog, it could not be found in ...
mail von Norbert:
ich möchte sicherheitshalber nochmal an meine Bugmeldung vom 28.7.16 erinnern, welche vielleicht...
Katja Luther
01:00 PM Revision 0f09a07c (cdm-vaadin): ref #5458 Fix initial opening of settings window
Patrick Plitzner
12:59 PM Revision dc4aa464 (cdm-vaadin): ref #5458 Layout for settings windows
Patrick Plitzner
12:47 PM Revision 5eece89f (cdm-vaadin): ref #5458 Split settings window into two
- one for distribution/taxonomy settings and one for other setting Patrick Plitzner
10:12 AM Revision ceaa3fed (taxeditor): fix #5891: save null instead of empty string for text fields
Katja Luther

10/16/2016

09:30 PM feature request #6128 (Closed): Include authorship in taxon search web service
/portal/taxon/find?doTaxaByCommonNames=1&doMisappliedNames=1&doSynonyms=1&doTaxa=1&pageNumber=0&pageSize=10&query={qu... Andreas Müller

10/14/2016

05:10 PM Revision 4229bb22 (cdmlib): ref #5826 adapt update script
Andreas Müller
04:35 PM feature request #3363 (In Progress): dagger (Totenkreuz) after extinct and fossil taxa
Andreas Müller
04:26 PM feature request #3925 (Resolved): Unplaced and excluded to TaxonNode
Andreas Müller
04:16 PM Revision 745b0cdf (cdmlib): Correct errors in update script
Andreas Müller
04:13 PM Revision 98053545 (cdmlib): ref #3925 Move excluded and unplaced to TaxonNode
Andreas Müller
04:12 PM task #6028 (Closed): Post-migration (trac->redmine) fixes
The obsolete custom fields have all been disabled and can be deleted. Andreas Kohlbecker
03:46 PM task #6020 (Closed): Consider replacing custom field 'keywords' by redmine_tags
The tags plugin is now enabled and the keywords have been migrated to tags.
I will also disable the keywords custo...
Andreas Kohlbecker
03:20 PM task #6029 (Closed): trac resolution to redmine status mapping invalid for `wontfix` and `invalid`
The fix is now applied to the production system. Andreas Kohlbecker
12:00 PM task #6029: trac resolution to redmine status mapping invalid for `wontfix` and `invalid`
Looks good.
I tested with http://130.133.70.38/redmine/projects/edit/issues?c%5B%5D=subject&c%5B%5D=priority&c%5B%...
Andreas Müller
12:57 PM bug #5676: Sensu does not show up if no author exists for secundum reference
This issue is ready for reviewing.
I created a dedicated test case which should covers all aspects: http://int.e-t...
Andreas Kohlbecker
12:05 PM Revision e29e2ebd (taxeditor): smaller changes for specimen import and others
Katja Luther
11:58 AM Revision 761340e4 (cdm-dataportal): ref #5676 test for correct sensu representation of misapplied...
Andreas Kohlbecker
11:53 AM Revision 4bccf32d (taxeditor): minor changes in excel import wizard
Katja Luther
11:44 AM Revision cd704234 (taxeditor): minor
Katja Luther
11:39 AM Revision aeff6228 (taxeditor): delete transient services
Katja Luther

10/13/2016

11:54 PM Revision 60dd84cb (cdmlib): fix #5952 Add identityCache
Andreas Müller
11:53 PM Revision d0353186 (cdmlib): cleanup
Andreas Müller
11:46 PM bug #6127 (Closed): NPE in NameCatalogue Controller on name_catalogue/taxon
fixed Andreas Müller
05:49 PM bug #6127: NPE in NameCatalogue Controller on name_catalogue/taxon
For the review please click this:
http://test.e-taxonomy.eu/cdmserver/cichorieae/name_catalogue/taxon?classificat...
Andreas Kohlbecker
05:46 PM bug #6127 (Resolved): NPE in NameCatalogue Controller on name_catalogue/taxon
Applied in changeset cdmlib:commit:cdmlib|3fa85b454e525c42baf068b4f7cf9ecaad757fb1. Andreas Kohlbecker
05:41 PM bug #6127 (Closed): NPE in NameCatalogue Controller on name_catalogue/taxon

http://api.cybertaxonomy.org:80/cichorieae/name_catalogue/taxon?classification=76b17487-3df4-41c7-8043-2bbb266eac...
Andreas Kohlbecker
06:26 PM Revision 092fd728 (cdm-vaadin): ref #5458 Update selected distribution status after selection
Patrick Plitzner
06:26 PM Revision 70ea5d03 (cdm-vaadin): Trim Code + add serial version uid
Patrick Plitzner
06:26 PM Revision 75f20bed (cdm-vaadin): ref #5458 Center detail window
Patrick Plitzner
06:26 PM Revision fda2cb06 (cdm-vaadin): ref #5458 Add toggle button for abbreviations to settings menu
- extract constants for session attributes Patrick Plitzner
06:26 PM Revision 3f6f86d5 (cdm-vaadin): ref #5458 Replace term dropdown with popup window for performance
Patrick Plitzner
06:26 PM Revision cb4029b0 (cdm-vaadin): ref #5458 Redesign navigation architecture
- after login the user will be redirected directly to the table view
and the settings dialog will be opened
-made se...
Patrick Plitzner
05:46 PM Revision 3fa85b45 (cdmlib): fix #6127 handling case the taxon has no LSID, avoid NPE in NameCatal...
Andreas Kohlbecker
05:19 PM Revision 8ebd16d6 (cdm-dataportal): fixing selenium support for chrome browser
Andreas Kohlbecker
05:00 PM feature request #5952 (Resolved): Second cache field for specimen (identityCache)
Andreas Müller
04:58 PM feature request #5952: Second cache field for specimen (identityCache)
255 characters should be enough as it should be a short cache only holding most important identifiers Andreas Müller
04:59 PM Revision 7e03e21e (cdmlib): fix #5952 Add fieldNumberCache
Andreas Müller
04:34 PM task #6020: Consider replacing custom field 'keywords' by redmine_tags
Looks good. I tested it with the following query and could not find any differences between keywords and tags:
htt...
Andreas Müller
04:24 PM feature request #5981 (Resolved): Add abbreviation to Rank "Cultivar"
Andreas Müller
04:23 PM Revision bcdf42bc (cdmlib): fix #5981 Add abbreviation to Rank "Cultivar"
Andreas Müller
04:09 PM Revision f6db28c4 (cdm-vaadin): cleanup
Andreas Müller
03:45 PM bug #3658 (Resolved): Update Nomenclatural code for datasources
Andreas Müller
03:44 PM feature request #5974 (In Progress): Remove synonym relationships
Andreas Müller
03:34 PM bug #4461 (Resolved): Ordering in datasources view fails
Andreas Müller
03:23 PM bug #5676 (Resolved): Sensu does not show up if no author exists for secundum reference
Applied in changeset commit:cdm-dataportal|763b610cafda73d41d185ddb4e44f8baa701c0a2. Andreas Kohlbecker
03:23 PM Revision 763b610c (cdm-dataportal): fix #5676 displaying the reference titleCache as sensu if aut...
Andreas Kohlbecker
02:46 PM Revision 5d177a2e (taxeditor): minor
Katja Luther
02:28 PM Revision eff603b4 (taxeditor): remove experimental code
Katja Luther
01:42 PM Revision 030ad7c6 (cdmlib-apps): ref #5499 latest changes to Edaphobase import
Andreas Müller
01:41 PM Revision 3ef2e1bd (cdmlib-apps): ref #5974 Remove synonym relationships (not finished yet)
Andreas Müller
01:30 PM Revision a4947270 (cdmlib-apps): ref #3658 remove nomenclaturalCode
Andreas Müller
01:21 PM feature request #6126 (New): Make the label for nomenclatural status configurable
add the possibility to configure whether the labels of the drop down menu are the title or the abbrev of the nomencla... Katja Luther
01:15 PM Revision fc545014 (taxeditor): minor
Katja Luther
01:15 PM bug #5692 (Resolved): Delete a person within the bulk editor deletes the person even if not saved
Applied in changeset taxeditor:commit:taxeditor|7dce04a4ef06e30769a711c8b6aceb11b2137c31. Katja Luther
01:07 PM bug #5692: Delete a person within the bulk editor deletes the person even if not saved
I adapted the deletion to the merging and added the delete configurator to the lineAnnotation. Now the objects are an... Katja Luther
01:15 PM Revision 7dce04a4 (taxeditor): fix #5692: adapt delete algorithm to annotatedLineEditor mechanisms
Katja Luther
01:14 PM Revision c0248cde (cdmlib): ref #3658 remove nomenclaturalCode from all datasource related classes
* and rename NomenclaturalCodeAwareDataSource Andreas Müller
12:17 PM task #5083: Alternative image viewer for dataportal [DISUSS]
The Universalviewer has now commonly accepted, even if there are concerns, but it is so far the best solution we have... Andreas Kohlbecker
12:06 PM task #5083: Alternative image viewer for dataportal [DISUSS]
*Ralf Hand wrote:*
Hallo Andreas,

danke für den Link. Wir als sehr fotoorientiertes Projekt sind nicht uneinge...
Andreas Kohlbecker
11:57 AM Revision 4b36c12a (cdmlib): ref #3658 Update nomenclatural code as CdmPreference (most probable v...
Andreas Müller
11:52 AM Revision 5dc46163 (cdmlib): cleanup
Andreas Müller
11:52 AM Revision cb96157e (cdmlib): ref #3658 Update nomenclatural code as CdmPreference (most probable v...
Andreas Müller
11:42 AM task #5943 (Closed): back to search button/link should go into a drupal block
Enablement of the new block is done automatically when running the module update script, so no further action needs t... Andreas Kohlbecker
11:16 AM task #5943 (Resolved): back to search button/link should go into a drupal block
Applied in changeset commit:cdm-dataportal|beb914ef020af7daeaf97ce1f75d7bcb098dc9eb. Andreas Kohlbecker
11:39 AM Revision d27e2b08 (cdm-dataportal): ref #5943 update script improvements
Andreas Kohlbecker
11:35 AM Revision fdb0f1fc (cdm-dataportal): ref #5943 update script improvements
Andreas Kohlbecker
11:16 AM Revision beb914ef (cdm-dataportal): fix #5943 back to search button/link moved to drupal block
Andreas Kohlbecker
11:09 AM Revision 152fcd76 (cdmlib): ref #5974 Replace synonym relationship update scripts (untested)
Andreas Müller
11:09 AM Revision 066c9dde (cdmlib): clean up and java doc
Andreas Müller
11:07 AM Revision 741a4c05 (cdmlib): #3547 remove not needed dataset.dtd from persistence
Andreas Müller
09:58 AM Revision fbeefcaf (cdmlib): ref #5974 Replace synonymRelationshipType by SynonymType and replace ...
Andreas Müller

10/12/2016

09:00 PM Revision f476ff86 (cdmlib): ref #5974 Remove synonym relationship first compiling implementation ...
Andreas Müller
03:12 PM Revision 88505483 (taxeditor): removing p6spy dependencies
Andreas Kohlbecker
03:04 PM Revision 7b6ed357 (cdmlib): IDE launcher config cdmlib-remote-webapp-unit-test
Andreas Kohlbecker
03:02 PM Revision df435453 (cdmlib): relaxing web service access restrictions
Andreas Kohlbecker
01:35 PM Revision ac7fcb04 (taxeditor): minor
Andreas Müller
12:13 PM Revision 558d5bd1 (cdm-vaadin): ref #5458 extract constants for session attributes
Patrick Plitzner
12:05 PM Revision 5f031b4f (cdm-vaadin): ref #5458 Error handling for abbreviated labels
Patrick Plitzner

10/11/2016

06:32 PM Revision 19e3a309 (taxeditor): removing generated file
Andreas Kohlbecker
06:29 PM Revision ecac085c (taxeditor): Revert "ref #6118 catching exception during checkConnection"
This reverts commit bb7b4f601b49f1ba29f149405246f120b4c46a9a. Andreas Kohlbecker
06:13 PM Revision 2cb5f120 (taxeditor): ref #6124 fixing Bundle-Version
Andreas Kohlbecker
06:09 PM task #6125 (New): Implement tests for OAuth2 in cdmlib-remote
The tests in spring-projects/spring-security-oauth samples/oauth2/sparklr project are a good start! Andreas Kohlbecker
04:53 PM Revision 785fc5d7 (cdm-vaadin): ref #5458 Add abbreviated labels to distribution table
Patrick Plitzner
04:46 PM Revision ca35dbce (taxeditor): OOPS!
Andreas Kohlbecker
04:44 PM Revision 868c5623 (taxeditor): fixing project version in pom.xml which was not updated after the ...
Andreas Kohlbecker
04:19 PM Revision bb7b4f60 (taxeditor): ref #6118 catching exception during checkConnection
Andreas Kohlbecker
03:35 PM bug #5948 (Resolved): supress protologue icon if according media uri is missing
Applied in changeset cdm-dataportal:commit:cdm-dataportal|275b2642c2438013cb1ac06bb986dceb388592d7. Andreas Kohlbecker
01:36 PM bug #5948 (In Progress): supress protologue icon if according media uri is missing
Andreas Kohlbecker
01:36 PM bug #5948 (Rejected): supress protologue icon if according media uri is missing
Andreas Kohlbecker
03:35 PM Revision 275b2642 (cdm-dataportal): fix #5948 supressing media when uri is missing, also turning ...
Andreas Kohlbecker
03:18 PM Revision e693adbd (cdm-vaadin): ref #5458 Reduce size of distribution table
- Show only abbreviated labels for presence absence terms Patrick Plitzner
02:22 PM bug #5692: Delete a person within the bulk editor deletes the person even if not saved
Whatever solution we choose please cover it with an according test. Andreas Müller
02:19 PM bug #5692: Delete a person within the bulk editor deletes the person even if not saved
Katja Luther wrote:
> Katja Luther wrote:
> I don't want to change the readonly=false, but maybe it is possible to ...
Andreas Müller
12:22 PM bug #5692: Delete a person within the bulk editor deletes the person even if not saved
Katja Luther wrote:
> Andreas Müller wrote:
> > Katja Luther wrote:
> > > The problem seems to be that we have to ...
Katja Luther
11:58 AM bug #5692: Delete a person within the bulk editor deletes the person even if not saved
Andreas Müller wrote:
> Katja Luther wrote:
> > The problem seems to be that we have to use the @transactional(read...
Katja Luther
11:43 AM bug #5692: Delete a person within the bulk editor deletes the person even if not saved
Katja Luther wrote:
> The problem seems to be that we have to use the @transactional(readonly=false) and this means ...
Andreas Müller
11:30 AM bug #5692: Delete a person within the bulk editor deletes the person even if not saved
The problem seems to be that we have to use the @transactional(readonly=false) and this means that the commit is call... Katja Luther
02:21 PM Revision 49a35b7d (cdm-vaadin): ref #5458 Refactoring
- removed single implemented interfaces
- merged methods
- removed unnecessary try&catch blocks
Patrick Plitzner
01:32 PM Revision 0b554b40 (cdm-dataportal): fix #6110 using the same request protocol for the map service
Andreas Kohlbecker
01:25 PM feature request #6110: Use https for map service calls when the portal is access via https
This needs to be tested at the edit-test server. The following requirements need to be fulfilled for testing:
* po...
Andreas Kohlbecker
01:22 PM feature request #6110 (Resolved): Use https for map service calls when the portal is access via h...
Applied in changeset commit:cdm-dataportal|7aeb752750a73e9a99fa20b4c3e932aae49a2a94. Andreas Kohlbecker
01:21 PM Revision 7aeb7527 (cdm-dataportal): fix #6110 using the same request protocol for the map service
Andreas Kohlbecker
11:15 AM Revision f9837f2a (cdm-vaadin): ref #5458 Add TermCacher class
Patrick Plitzner
10:46 AM Revision 4f7ccb87 (cdm-vaadin): ref #5458 Implement multi select for NamedArea selection
Patrick Plitzner
10:04 AM task #6118: evaluate spring-security-auth2 and spring-cloud-security as a framework for OAuth2
updating development test script to latest implementation Andreas Kohlbecker
10:01 AM Revision 9d398078 (cdmlib): rel #6118 switching from xml to java based web security configuration
Andreas Kohlbecker
10:01 AM Revision e5c1f174 (cdmlib): cleaning indent
Andreas Kohlbecker
10:01 AM Revision 9872d2b2 (cdmlib): ref #6118 working test implementation of OAuth2
- grant types 'implicite', 'authorization_code' tested and working
- /manage/ service protected (OK for production...
Andreas Kohlbecker
10:01 AM Revision 01fe562b (cdmlib): ref #6118 OAuth2 AuthorizationServer implemented
Andreas Kohlbecker
10:01 AM Revision 638f3be5 (cdmlib): ref #6118 OAuth2 ready for production
- removing development setup
- UserController to return details on the authenticated principal
Andreas Kohlbecker

10/10/2016

10:39 PM task #6118: evaluate spring-security-auth2 and spring-cloud-security as a framework for OAuth2
Adding shell script to test different authentication modes. Andreas Kohlbecker
04:38 PM Revision e37d3114 (cdm-vaadin): ref #5458 Add generated serial version uid
Patrick Plitzner
10:17 AM Revision c1c005ed (cdm-vaadin): Remove generated css files and add them to .gitignore
Patrick Plitzner
 

Also available in: Atom

Add picture from clipboard (Maximum size: 40 MB)