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From 09/19/2016 to 10/18/2016

10/18/2016

07:51 PM Revision c872e418 (cdmlib): Merge remote-tracking branch 'origin/cdm-4.1' into develop
Andreas Müller
07:50 PM Revision 904c8661 (cdmlib): minor
Andreas Müller
07:31 PM Revision b72cb56a (cdmlib): remaining merge issue for morge develop to cdm4.1
Andreas Müller
06:52 PM Revision aabd8c12 (cdmlib): Merge remote-tracking branch 'origin/develop' into cdm-4.1
Conflicts:
cdmlib-db/pom.xml
cdmlib-ext/pom.xml
cdmlib-io/pom.xml
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/exc...
Andreas Müller
06:45 PM Revision d196eb4d (cdm-vaadin): ref #5458 Usability and UI tweaks
Patrick Plitzner
06:40 PM Revision 8f8aae13 (cdm-dataportal): whitespace
Andreas Kohlbecker
06:38 PM Revision e8d43aef (cdm-dataportal): whitespace
Andreas Kohlbecker
05:57 PM Revision b8e7047b (cdm-vaadin): ref #5458 Performance increase for taxon node selection
- by using SqlContainer the nodes are lazily loaded
- child nodes are loaded via a second SQL query which is filtere...
Patrick Plitzner
05:55 PM Revision a8118bab (cdm-vaadin): ref #5458 remove distribution selection view
Patrick Plitzner
05:52 PM Revision 84f54e17 (cdmlib): update remote-webapp test H2 to model 4.1
Andreas Müller
05:51 PM Revision 1e55f5c2 (cdmlib): fix #5634 Update excluded/unplaced for TaxonNodes with no taxon_id
Andreas Müller
05:17 PM Revision c3c1740f (cdmlib): minor
Andreas Müller
04:53 PM Revision d7fa3e13 (cdmlib): fix #5974 fix moving synonym type to TaxonBase and SynonymRelationTyp...
Andreas Müller
04:07 PM Revision e0af1680 (cdmlib): fix clone test for Media
Andreas Müller
04:00 PM Revision ced4a690 (cdmlib): remove final from classification.description
Andreas Müller
03:58 PM Revision c10a757f (cdmlib): minor
Andreas Müller
03:58 PM Revision 8e6c53f9 (cdmlib): ref #5634 fix clone issue for excludedNote
Andreas Müller
03:57 PM Revision 4cf3d32a (cdmlib): Cleanup language string handling and cloning
Andreas Müller
02:16 PM Revision 33b908b7 (cdmlib): minor
Andreas Müller
02:15 PM Revision b362a2c0 (cdmlib): ref #5952 Add index to identityCache
Andreas Müller
02:14 PM Revision 3f43c155 (cdmlib): cleanup
Andreas Müller
02:13 PM Revision 4bfde47a (cdmlib): ref #3658 further improvements for NomCode update
Andreas Müller
02:11 PM Revision 45c1a780 (cdmlib): #5634 Add excludedNote to TaxonNode (still some tests not running)
Andreas Müller
02:07 PM Revision 1402e210 (cdmlib): ref #3925 Adapt tests for moving unplaced and excluded
Andreas Müller
11:13 AM Revision c2f0001b (taxeditor): ref #6050: test git/redmine and add the pref keys for configurable...
Katja Luther
10:37 AM Revision 3b0bc0db (cdm-vaadin): ref #5458 performance tweak for distribution status selection
Patrick Plitzner
10:29 AM Revision 08a698af (cdmlib): ref #6099: removing cascading to child nodes and adapting the service...
Katja Luther
09:59 AM Revision 88b1995d (cdmlib): ref #5431: the type designation blocks the name deletion only if it i...
Katja Luther

10/17/2016

05:25 PM Revision e11ccba6 (cdm-vaadin): ref #5458 UI tweak for settings window
Patrick Plitzner
01:31 PM Revision 32bf574c (cdm-vaadin): ref #5458 Add support for setting distribution status filter in s...
Patrick Plitzner
01:30 PM Revision bd46f97b (cdm-vaadin): ref #5458 Fix potential NPE
Patrick Plitzner
01:15 PM Revision 5a8a1f14 (taxeditor): fix #6129: remove additional authorstring in selection dialog sear...
Katja Luther
01:00 PM Revision 0f09a07c (cdm-vaadin): ref #5458 Fix initial opening of settings window
Patrick Plitzner
12:59 PM Revision dc4aa464 (cdm-vaadin): ref #5458 Layout for settings windows
Patrick Plitzner
12:47 PM Revision 5eece89f (cdm-vaadin): ref #5458 Split settings window into two
- one for distribution/taxonomy settings and one for other setting Patrick Plitzner
10:12 AM Revision ceaa3fed (taxeditor): fix #5891: save null instead of empty string for text fields
Katja Luther

10/14/2016

05:10 PM Revision 4229bb22 (cdmlib): ref #5826 adapt update script
Andreas Müller
04:16 PM Revision 745b0cdf (cdmlib): Correct errors in update script
Andreas Müller
04:13 PM Revision 98053545 (cdmlib): ref #3925 Move excluded and unplaced to TaxonNode
Andreas Müller
12:05 PM Revision e29e2ebd (taxeditor): smaller changes for specimen import and others
Katja Luther
11:58 AM Revision 761340e4 (cdm-dataportal): ref #5676 test for correct sensu representation of misapplied...
Andreas Kohlbecker
11:53 AM Revision 4bccf32d (taxeditor): minor changes in excel import wizard
Katja Luther
11:44 AM Revision cd704234 (taxeditor): minor
Katja Luther
11:39 AM Revision aeff6228 (taxeditor): delete transient services
Katja Luther

10/13/2016

11:54 PM Revision 60dd84cb (cdmlib): fix #5952 Add identityCache
Andreas Müller
11:53 PM Revision d0353186 (cdmlib): cleanup
Andreas Müller
06:26 PM Revision 092fd728 (cdm-vaadin): ref #5458 Update selected distribution status after selection
Patrick Plitzner
06:26 PM Revision cb4029b0 (cdm-vaadin): ref #5458 Redesign navigation architecture
- after login the user will be redirected directly to the table view
and the settings dialog will be opened
-made se...
Patrick Plitzner
06:26 PM Revision 75f20bed (cdm-vaadin): ref #5458 Center detail window
Patrick Plitzner
06:26 PM Revision 3f6f86d5 (cdm-vaadin): ref #5458 Replace term dropdown with popup window for performance
Patrick Plitzner
06:26 PM Revision fda2cb06 (cdm-vaadin): ref #5458 Add toggle button for abbreviations to settings menu
- extract constants for session attributes Patrick Plitzner
06:26 PM Revision 70ea5d03 (cdm-vaadin): Trim Code + add serial version uid
Patrick Plitzner
05:46 PM Revision 3fa85b45 (cdmlib): fix #6127 handling case the taxon has no LSID, avoid NPE in NameCatal...
Andreas Kohlbecker
05:19 PM Revision 8ebd16d6 (cdm-dataportal): fixing selenium support for chrome browser
Andreas Kohlbecker
04:59 PM Revision 7e03e21e (cdmlib): fix #5952 Add fieldNumberCache
Andreas Müller
04:23 PM Revision bcdf42bc (cdmlib): fix #5981 Add abbreviation to Rank "Cultivar"
Andreas Müller
04:09 PM Revision f6db28c4 (cdm-vaadin): cleanup
Andreas Müller
03:23 PM Revision 763b610c (cdm-dataportal): fix #5676 displaying the reference titleCache as sensu if aut...
Andreas Kohlbecker
02:46 PM Revision 5d177a2e (taxeditor): minor
Katja Luther
02:28 PM Revision eff603b4 (taxeditor): remove experimental code
Katja Luther
01:42 PM Revision 030ad7c6 (cdmlib-apps): ref #5499 latest changes to Edaphobase import
Andreas Müller
01:41 PM Revision 3ef2e1bd (cdmlib-apps): ref #5974 Remove synonym relationships (not finished yet)
Andreas Müller
01:30 PM Revision a4947270 (cdmlib-apps): ref #3658 remove nomenclaturalCode
Andreas Müller
01:15 PM Revision fc545014 (taxeditor): minor
Katja Luther
01:15 PM Revision 7dce04a4 (taxeditor): fix #5692: adapt delete algorithm to annotatedLineEditor mechanisms
Katja Luther
01:14 PM Revision c0248cde (cdmlib): ref #3658 remove nomenclaturalCode from all datasource related classes
* and rename NomenclaturalCodeAwareDataSource Andreas Müller
11:57 AM Revision 4b36c12a (cdmlib): ref #3658 Update nomenclatural code as CdmPreference (most probable v...
Andreas Müller
11:52 AM Revision 5dc46163 (cdmlib): cleanup
Andreas Müller
11:52 AM Revision cb96157e (cdmlib): ref #3658 Update nomenclatural code as CdmPreference (most probable v...
Andreas Müller
11:39 AM Revision d27e2b08 (cdm-dataportal): ref #5943 update script improvements
Andreas Kohlbecker
11:35 AM Revision fdb0f1fc (cdm-dataportal): ref #5943 update script improvements
Andreas Kohlbecker
11:16 AM Revision beb914ef (cdm-dataportal): fix #5943 back to search button/link moved to drupal block
Andreas Kohlbecker
11:09 AM Revision 152fcd76 (cdmlib): ref #5974 Replace synonym relationship update scripts (untested)
Andreas Müller
11:09 AM Revision 066c9dde (cdmlib): clean up and java doc
Andreas Müller
11:07 AM Revision 741a4c05 (cdmlib): #3547 remove not needed dataset.dtd from persistence
Andreas Müller
09:58 AM Revision fbeefcaf (cdmlib): ref #5974 Replace synonymRelationshipType by SynonymType and replace ...
Andreas Müller

10/12/2016

09:00 PM Revision f476ff86 (cdmlib): ref #5974 Remove synonym relationship first compiling implementation ...
Andreas Müller
03:12 PM Revision 88505483 (taxeditor): removing p6spy dependencies
Andreas Kohlbecker
03:04 PM Revision 7b6ed357 (cdmlib): IDE launcher config cdmlib-remote-webapp-unit-test
Andreas Kohlbecker
03:02 PM Revision df435453 (cdmlib): relaxing web service access restrictions
Andreas Kohlbecker
01:35 PM Revision ac7fcb04 (taxeditor): minor
Andreas Müller
12:13 PM Revision 558d5bd1 (cdm-vaadin): ref #5458 extract constants for session attributes
Patrick Plitzner
12:05 PM Revision 5f031b4f (cdm-vaadin): ref #5458 Error handling for abbreviated labels
Patrick Plitzner

10/11/2016

06:32 PM Revision 19e3a309 (taxeditor): removing generated file
Andreas Kohlbecker
06:29 PM Revision ecac085c (taxeditor): Revert "ref #6118 catching exception during checkConnection"
This reverts commit bb7b4f601b49f1ba29f149405246f120b4c46a9a. Andreas Kohlbecker
06:13 PM Revision 2cb5f120 (taxeditor): ref #6124 fixing Bundle-Version
Andreas Kohlbecker
04:53 PM Revision 785fc5d7 (cdm-vaadin): ref #5458 Add abbreviated labels to distribution table
Patrick Plitzner
04:46 PM Revision ca35dbce (taxeditor): OOPS!
Andreas Kohlbecker
04:44 PM Revision 868c5623 (taxeditor): fixing project version in pom.xml which was not updated after the ...
Andreas Kohlbecker
04:19 PM Revision bb7b4f60 (taxeditor): ref #6118 catching exception during checkConnection
Andreas Kohlbecker
03:35 PM Revision 275b2642 (cdm-dataportal): fix #5948 supressing media when uri is missing, also turning ...
Andreas Kohlbecker
03:18 PM Revision e693adbd (cdm-vaadin): ref #5458 Reduce size of distribution table
- Show only abbreviated labels for presence absence terms Patrick Plitzner
02:21 PM Revision 49a35b7d (cdm-vaadin): ref #5458 Refactoring
- removed single implemented interfaces
- merged methods
- removed unnecessary try&catch blocks
Patrick Plitzner
01:32 PM Revision 0b554b40 (cdm-dataportal): fix #6110 using the same request protocol for the map service
Andreas Kohlbecker
01:21 PM Revision 7aeb7527 (cdm-dataportal): fix #6110 using the same request protocol for the map service
Andreas Kohlbecker
11:15 AM Revision f9837f2a (cdm-vaadin): ref #5458 Add TermCacher class
Patrick Plitzner
10:46 AM Revision 4f7ccb87 (cdm-vaadin): ref #5458 Implement multi select for NamedArea selection
Patrick Plitzner
10:01 AM Revision 638f3be5 (cdmlib): ref #6118 OAuth2 ready for production
- removing development setup
- UserController to return details on the authenticated principal
Andreas Kohlbecker
10:01 AM Revision 9872d2b2 (cdmlib): ref #6118 working test implementation of OAuth2
- grant types 'implicite', 'authorization_code' tested and working
- /manage/ service protected (OK for production...
Andreas Kohlbecker
10:01 AM Revision 01fe562b (cdmlib): ref #6118 OAuth2 AuthorizationServer implemented
Andreas Kohlbecker
10:01 AM Revision 9d398078 (cdmlib): rel #6118 switching from xml to java based web security configuration
Andreas Kohlbecker
10:01 AM Revision e5c1f174 (cdmlib): cleaning indent
Andreas Kohlbecker

10/10/2016

04:38 PM Revision e37d3114 (cdm-vaadin): ref #5458 Add generated serial version uid
Patrick Plitzner
10:17 AM Revision c1c005ed (cdm-vaadin): Remove generated css files and add them to .gitignore
Patrick Plitzner

10/07/2016

07:06 PM Revision d5d3fb6e (cdmlib): ref #3547 remove testDelete-result1 and cleanup and reuse testDelete-...
Andreas Müller
06:30 PM Revision 52ee385e (cdmlib): ref #3547 Cleanup TaxonDaoHibernateImplTest.xml
Andreas Müller
04:56 PM Revision 77cb7459 (cdmlib): ref #3547 fix related tests
Andreas Müller
04:06 PM Revision 9a3490b1 (cdmlib): ref #3547 Cleanup TaxonDao.testGetTaxaByNameAndArea.xml test data a bit
Andreas Müller
03:46 PM Revision 8831fc56 (cdmlib): ref #3547 Cleanup TaxonDao.testFindDeleted test data
Andreas Müller
03:30 PM Revision 58c5052a (cdmlib): ref #3547 Cleanup TaxonDao.testFind test data
Andreas Müller
03:11 PM Revision 683f6ce0 (cdmlib): ref #5972: add method to count referencing objects
Katja Luther
03:06 PM Revision ed506dcb (cdmlib): fix #6089 Remove taxonomicParentCache and taxonomicChildrenCount, fix...
Andreas Müller
03:03 PM Revision a3e69a37 (taxeditor): fix #5888: add the element as argument to postExecute method s
Katja Luther
11:22 AM Revision 30451d3c (cdmlib): fix #6089 Remove taxonomicParentCache and taxonomicChildrenCount from...
Andreas Müller
11:17 AM Revision a14ebae1 (cdmlib): remove ImportReport in model branch
Andreas Müller
10:53 AM Revision 4f2fff32 (cdmlib): minor
Andreas Müller
10:53 AM Revision 4881f5e5 (cdmlib): ref #5499 add some markerType methods
Andreas Müller
10:53 AM Revision 062fde15 (cdmlib): fix #6122 fix signature issue
Andreas Müller
10:53 AM Revision b4b7bfe8 (cdmlib): fix #6122 add titleCache service to remote
Andreas Müller
10:53 AM Revision 2d1fc4f4 (cdmlib): Use abstract controller for identifiable controllers
Andreas Müller
10:53 AM Revision 4642e957 (cdmlib): Create and rename Identifiable(List)Controllers
Andreas Müller
10:53 AM Revision 40812151 (cdmlib): fix #6122 add titleCache service
Andreas Müller
10:53 AM Revision 33754b79 (cdmlib): fx #6119 Implement uuidAndTitleCache remote services
Andreas Müller
10:53 AM Revision c6af6a3d (cdmlib): fix #6120 Cleanup uuidAndTitleCache methods
Andreas Müller
10:53 AM Revision 77351513 (cdmlib): Minor cleanup
Andreas Müller
10:53 AM Revision 51cfe899 (cdmlib): add missing changes
Katja Luther
10:53 AM Revision 4b37153c (cdmlib): minor
Katja Luther
10:52 AM Revision 91e5776b (cdmlib): specimen import/search changes
Katja Luther
10:44 AM Revision d9b720ac (cdmlib): delete system.out.println from test
Katja Luther
10:44 AM Revision bb8caa72 (cdmlib): Updating develop poms back to pre merge state
jenkins
10:41 AM Revision 49773574 (cdmlib): updating develop poms to master versions to avoid merge conflicts
jenkins
10:35 AM Revision 04b17372 (cdmlib): updating poms for branch'release/4.3.0' with non-snapshot versions
jenkins
10:23 AM Revision 75921880 (cdmlib): updating poms for 4.4.0-SNAPSHOT development
jenkins
10:23 AM Revision ff7f5e37 (cdmlib): Rename doPageChildNodes
Andreas Müller
10:23 AM Revision 189558f3 (cdmlib): ref #6065 improved Pager handling
Andreas Müller
10:23 AM Revision 21d66ebf (cdmlib): ref #6065 improved Pager handling and pager exception handling
Andreas Müller
10:23 AM Revision d8c4f8b9 (cdmlib): ref #6065 Handle synonyms in taxonInContext
Andreas Müller
10:23 AM Revision 7dde0731 (cdmlib): Cleanup
Andreas Müller
10:23 AM Revision 1d54cd17 (cdmlib): ref #6065 fix NPEs in classification service
Andreas Müller
10:23 AM Revision ae7b9470 (cdmlib): ref #6065 fix NPE in pageSize/limit
Andreas Müller
10:23 AM Revision 8c2c6a09 (cdmlib): ref #6065 fix NPE in pageSize
Andreas Müller
10:23 AM Revision 4f290ba6 (cdmlib): ref #6065 fix page size and add marked ancestors
Andreas Müller
10:23 AM Revision fe053257 (cdmlib): ref #6065 fix missing taxonUuid in URL
Andreas Müller
10:23 AM Revision d17b9e90 (cdmlib): ref #6065 first implementation of taxonInContext service
Andreas Müller
10:23 AM Revision 50355d23 (cdmlib): cleanup
Andreas Müller
10:23 AM Revision 3a646557 (cdmlib): further refactor FindByIdentifierDTO and FindByMarkerDTO
Andreas Müller
10:23 AM Revision 912932b1 (cdmlib): rename FindByIdentifierDTO and FindByMarkerDTO
Andreas Müller
10:23 AM Revision 83220271 (cdmlib): Revert "fix #6037 per batch transction commit implemented for excel i...
This reverts commit 53067226137bd8528e6bc26f21edbf98aebe26a9. Andreas Kohlbecker
10:23 AM Revision f6930dd5 (cdmlib): ref #6066 rename childNodes to childNodesByTaxon in ClassificationCon...
Andreas Müller
10:23 AM Revision b296585f (cdmlib): ref #6066 add getChildNodes to classification service
Andreas Müller
10:23 AM Revision 87e6bb6f (cdmlib): ref #6087 adding orderINdex to TermDTO
Andreas Kohlbecker
10:23 AM Revision f742ce44 (cdmlib): ref #6066 fix Index out of bound exception
Andreas Müller
10:23 AM Revision 38b82688 (cdmlib): fix #6061: search in titlecache and nomenclatural titleCache in getUu...
Katja Luther
10:23 AM Revision 6a70de90 (cdmlib): fix failing IPNI Service Test
Katja Luther
10:23 AM Revision 1b107dc2 (cdmlib): revert tests
Andreas Müller
10:23 AM Revision 4dc39e99 (cdmlib): Ignore service test
Andreas Müller
10:23 AM Revision 0cf72dcb (cdmlib): ref #6072 test missing entity in webservice
Andreas Müller
10:23 AM Revision 5c95a5bf (cdmlib): ref #6072 test missing entity in webservice
Andreas Müller
10:23 AM Revision c70c5dcb (cdmlib): ref #6072 set defaults to false and hardcode includeEntity to true fo...
Andreas Müller
10:23 AM Revision 51104f62 (cdmlib): ref #6072 fix signature issue in remote (2nd try)
Andreas Müller
10:23 AM Revision 5dd4feb8 (cdmlib): ref #6072 fix signature issue in remote
Andreas Müller
10:23 AM Revision c46bcf17 (cdmlib): ref #6072 fix compilation issue in IIdentifiableEntityService
Andreas Müller
10:23 AM Revision d28fe45c (cdmlib): Cleanup
Andreas Müller
10:23 AM Revision 1e8a54ff (cdmlib): fix #6072 Implement findIdentifiableEntityByMarkers
Andreas Müller
10:23 AM Revision 4fb554ff (cdmlib): ref #6089 Remove failing irrelevant test
Andreas Müller
10:23 AM Revision e5605065 (cdmlib): ref #6089 Remove all calls and methods for taxonomicChildrenCount and...
Andreas Müller
10:23 AM Revision 9f1aa368 (cdmlib): Cleanup; Delete unnecessary test classes.
Andreas Müller
10:23 AM Revision 19ef2a42 (cdmlib): fix #6066 Implement doPageChildNodes with doSynonyms
Andreas Müller
10:23 AM Revision 1d5f625c (cdmlib): Clean up
Andreas Müller
10:23 AM Revision e4b34dc5 (cdmlib): Adapt failing test in NonViralNameParserImplTest
Andreas Müller
10:23 AM Revision 84bb1d2c (cdmlib): ref #6086 solving the problems in the java-script of the web applicat...
- chunk information: number rounded and label renamed
- Percentage number rounding fixed
Andreas Kohlbecker
10:23 AM Revision d178ecb9 (cdmlib): ref #6086 fix failing test
Andreas Müller
10:23 AM Revision 4cb92234 (cdmlib): rel #6086 Improve rounding for progress monitor
* fix error in rounding by using round not ceil
* add method for user defined scaled rounding
Andreas Müller
10:23 AM Revision be0e5d61 (cdmlib): some cleanup
Andreas Müller
10:23 AM Revision 7258c318 (cdmlib): fix #5837: search on abbrevTitleCache instead of abbrev title
Katja Luther
10:23 AM Revision 95f65f5e (cdmlib): correcting erroneous commit
Andreas Kohlbecker
10:23 AM Revision 10b839e4 (cdmlib): gitignore
Andreas Kohlbecker
10:23 AM Revision 4aa98446 (cdmlib): fix #4497 solving problem with status parameter in taxon search
Andreas Kohlbecker
10:23 AM Revision 1990fe50 (cdmlib): ref #5969: add PreferenceService to applicationController
Katja Luther
10:23 AM Revision 77c1c705 (cdmlib): Remove duplicate method
Patrick Plitzner
10:23 AM Revision 07a6e50e (cdmlib): rel #5957 improve tests for groupTaxaByHigherTaxon
Andreas Müller
10:23 AM Revision a8609cad (cdmlib): fix #5957 fix IndexOutOfBound exception and some other improvements f...
Andreas Müller
10:23 AM Revision c00d3bcc (cdmlib): minor
Andreas Müller
10:23 AM Revision 05e59317 (cdmlib): better percentage values from Progressmonitor
Andreas Kohlbecker
10:23 AM Revision d436abeb (cdmlib): fix #6061: search for titlecache if abbrev title is empty
Katja Luther
10:23 AM Revision 03c8f07b (cdmlib): fix #6061: smaller changes
Katja Luther
10:23 AM Revision 5ef16029 (cdmlib): ref #6032 Remove test for rank as mentioned in ticket
Patrick Plitzner
10:23 AM Revision f995ae78 (cdmlib): Add Vorabdr. to parsable volume
Andreas Müller
10:23 AM Revision f380413e (cdmlib): minor
Katja Luther
10:23 AM Revision e1c69e2f (cdmlib): minor
Katja Luther
10:23 AM Revision 3d36bbcd (cdmlib): smaller changes for importing nom. reference in normal explicit excel...
Katja Luther
10:22 AM Revision f44fb5c3 (cdmlib): normal explicit excel import: add reference to name import
Katja Luther
10:22 AM Revision 0c949c56 (cdmlib): Add javadoc for languages
Andreas Müller
10:22 AM Revision d40ad0be (cdmlib): fix #6060 parse author with -e-
Andreas Müller
10:22 AM Revision 9892fe45 (cdmlib): rel #6057 further improvements for authors with accent grave
Andreas Müller
10:22 AM Revision a333126e (cdmlib): fix #6057 Accent Graph in author parser
Andreas Müller
10:22 AM Revision 9fc0e990 (cdmlib): ref #4260 Added test for 0 parameter query
Patrick Plitzner
10:22 AM Revision f3755e6f (cdmlib): ref #6045 some comments and clean up
Patrick Plitzner
10:22 AM Revision 6d3f64b8 (cdmlib): minor changes in excel import
Katja Luther
10:22 AM Revision e2b14fdb (cdmlib): adding missing test file for tropicos import
Katja Luther
10:22 AM Revision 47da1bc9 (cdmlib): extend excel import to cover simple tropicos data
Katja Luther
10:22 AM Revision f3e8146c (cdmlib): ref #6032 test name parser support for hybrid ranks and non-hybrids
Andreas Müller
10:22 AM Revision ec9e0b76 (cdmlib): ref #6030 Add additional test for genus hybrid formula parsing
Andreas Müller
10:22 AM Revision 50aca191 (cdmlib): fix #5893: set parse reference public to use it in fauna europaea import
Katja Luther
10:22 AM Revision 4cae9071 (cdmlib): fix #6030 Parse Genus hybrid formulas correctly
Andreas Müller
10:22 AM Revision 2f495573 (cdmlib): ref #6045 Add test for getAncestor()
Patrick Plitzner
10:22 AM Revision 889c7e91 (cdmlib): fix #6045: fixing the NaturalOrderComparator and complete the test
Katja Luther
10:22 AM Revision aa478e85 (cdmlib): ref #6045 Fix NPE for TaxonNaturalComparator
- fix getAncestors() method of taxon node
- added JUnit test
Patrick Plitzner
10:22 AM Revision a9e92136 (cdmlib): fix #5869 adapt implementation for reusing names or taxa with remoting
Katja Luther
10:22 AM Revision cd53ed98 (cdmlib): ref #5837 implement search for nomenclatural title
Katja Luther
10:22 AM Revision a82e8663 (cdmlib): ref #6042 Avoid -title cache generation not implemented- for citations
in specimen table view Patrick Plitzner
10:22 AM Revision db7c13f4 (cdmlib): fix #5828: add abbrevTitleCache and titleCache to uuidAndTitleCache
Katja Luther
10:22 AM Revision c13b20b4 (cdmlib): revert the changes in representation of rank infraspecific unranked
Katja Luther
10:22 AM Revision 81bcaf06 (cdmlib): Remove @Ignore from test
Patrick Plitzner
10:22 AM Revision 075bc33f (cdmlib): Fix merge problems
Patrick Plitzner
10:22 AM Revision d81a4119 (cdmlib): fix #6001 Clean up multiple sourceNotLinked() methods
Patrick Plitzner
10:22 AM Revision f073606c (cdmlib): Fix titlecache issues for specimen table in data portal
- Use Link class for every link
- Open all links in new window
Patrick Plitzner
10:22 AM Revision 80d86f0e (cdmlib): smaller changes
Katja Luther
10:22 AM Revision d3c53a58 (cdmlib): specimen import changes
Katja Luther
10:22 AM Revision 7f3f7703 (cdmlib): Import specimen scans with StillImage type
Patrick Plitzner
10:22 AM Revision e5413aa3 (cdmlib): Remove unneccesary casts
Patrick Plitzner
10:22 AM Revision b6c2dd01 (cdmlib): ref #5448 Change abbreviation for unranked infraspecific rank
Patrick Plitzner
10:22 AM Revision 65053ce9 (cdmlib): fix #6037 per batch transction commit implemented for excel imports
Andreas Kohlbecker
10:22 AM Revision b2cdc597 (cdmlib): #5751 remove version numbers from cdmlib-db and some cleanup
Andreas Müller
10:22 AM Revision 90a4759c (cdmlib): #5751 finish redo r28780
* use cdmlib-test in persistence for 2 antrun plugin and hibernate3 plugin Andreas Müller
10:22 AM Revision 9d99878c (cdmlib): #5751 Partly redo r28780,
* remove com.mchange from cdmlib-remote-webapp test scope
* use cdmlib-db in persistence for 2 further plugins
Andreas Müller
10:22 AM Revision 89edc8d2 (cdmlib): #5751 further redo r28776, handle c3p0 via cdmlib-db in persistence
Andreas Müller
10:22 AM Revision ddfeb94f (cdmlib): #5751 further redo r28776, add cdmlib-db to persistence and remote-we...
Andreas Müller
10:22 AM Revision 9b14d59d (cdmlib): #5751 Partly redo r28776, add c3p0 and mchange to cdmlib-db
* r28776 had been reverted due to problems, try to redo those parts that
do not create problems
Andreas Müller
10:22 AM Revision c81d69db (cdmlib): #3868 Add nothovar. test
Andreas Müller
10:22 AM Revision 3a8df162 (cdmlib): #6000 fix missing default color
Andreas Müller
10:22 AM Revision 53047c94 (cdmlib): #6000 Add static methods and uuids for new PAT terms
Andreas Müller
10:22 AM Revision b9cc4434 (cdmlib): #6000 Add some new PresenceAbsenceTerms from Cyprus and Cuba
* Invasive changed to naturalized invasive (Cyprus, according to Pysek)
* naturalized invasive: presence questionab...
Andreas Müller
10:22 AM Revision e561a9d4 (cdmlib): #6000 Use new CASUAL Method instead of derpeacted INTRODUCED_ADVENTIT...
Andreas Müller
10:22 AM Revision eafa3175 (cdmlib): #6000 Unify some PresenceAbsenceTerms (merge naturalized, rename adve...
Andreas Müller
10:22 AM Revision 67cecfbb (cdmlib): Improve import report
Patrick Plitzner
10:22 AM Revision 15b4b2c0 (cdmlib): #5251 Fix Incorrect taxon source attachments
Patrick Plitzner
10:22 AM Revision adfafad3 (cdmlib): Improved import report
Patrick Plitzner

10/06/2016

05:02 PM Revision b5a13d3d (cdmlib): set the tests to ignore until the dna import is fixed again
Katja Luther
05:02 PM Revision 29ee6f42 (cdmlib): fix merge problems
Katja Luther
05:02 PM Revision 40ad1567 (cdmlib): fix merge problems
Katja Luther
05:02 PM Revision 51fdd82a (cdmlib): fix merge problem
Katja Luther
05:02 PM Revision a031824e (cdmlib): minor
Katja Luther
05:02 PM Revision e797de01 (cdmlib): missing changes in test
Katja Luther
05:02 PM Revision 180fa299 (cdmlib): minor
Katja Luther
05:02 PM Revision 02d46959 (cdmlib): Avoid double dot at end of field unit titlecache
Patrick Plitzner
05:02 PM Revision 2bcd23da (cdmlib): Improve ABCD import report
Patrick Plitzner
05:02 PM Revision 187bc599 (cdmlib): missing changes in taxonDao
Katja Luther
05:02 PM Revision cb77e468 (cdmlib): minor
Katja Luther
05:02 PM Revision d9a28e0c (cdmlib): minor
Katja Luther
05:02 PM Revision b41d771a (cdmlib): delete the excluded taxa parameter for UuidAndTitleCache of classific...
Katja Luther
05:01 PM Revision 702e2f6e (cdmlib): Revert "getUuidAndTitleCache of classificationservice does not need t...
This reverts commit 1b553592f0055e0fec1ab3878236fa0ecad1bd17. Katja Luther
05:01 PM Revision 4d017d52 (cdmlib): hamonization of specimen import
Katja Luther
05:01 PM Revision 1a8f15ad (cdmlib): first implementation for harmonization of import of specimen data
Katja Luther
05:01 PM Revision ce2ea9e9 (cdmlib): sortindex updater utilities
Katja Luther
05:01 PM Revision 4d622b5d (cdmlib): getUuidAndTitleCache of classificationservice does not need the exclu...
Katja Luther
05:01 PM Revision 92835c7d (cdmlib): Allow whitespace after species epithet hybrid sign
Andreas Müller
05:01 PM Revision c013af56 (cdmlib): #3868 Handle notho ranks correctly while formatting
Andreas Müller
05:01 PM Revision 33543fe4 (cdmlib): Use title cache as fallback for specimen DTO for portal table
Patrick Plitzner
05:01 PM Revision 21ad7624 (cdmlib): #5981 Add abbreviation to Rank "Cultivar"
Andreas Müller
05:01 PM Revision d6fa3b9e (cdmlib): Use EN_DASH in E+M Condensed Distribution
Andreas Müller
05:01 PM Revision 551fdcf6 (cdmlib): #5777 Replace dash type in PAT symbols
Andreas Müller
05:01 PM Revision 5abd7a84 (cdmlib): #5777 Fix symbol reading for PresenceAbsenceTerm csv
Andreas Müller
05:01 PM Revision 9d567be5 (cdmlib): Add isInfraGenericButNotSpeciesGroup() method to Rank
Andreas Müller
05:01 PM Revision 17e6a14c (cdmlib): Pass pageSize and pageNumber to list method
Patrick Plitzner
05:01 PM Revision 5df1abe9 (cdmlib): small changes in CsvNameExport
Katja Luther
05:01 PM Revision aaf5494f (cdmlib): It seems as if oclc number are no longer supported by the MobotOpenUr...
Andreas Kohlbecker
05:01 PM Revision adfc15ec (cdmlib): small change in CdvNameExport
Katja Luther
04:58 PM Revision c047b4ab (cdmlib): minor
Andreas Müller
04:58 PM Revision faeea161 (cdmlib): ref #5499 add some markerType methods
Andreas Müller
04:44 PM Revision d7023fd8 (taxeditor): fix transient services
Andreas Müller
04:16 PM Revision 43539f49 (cdmlib): fix #6122 fix signature issue
Andreas Müller
02:51 PM Revision 9c337ba9 (cdmlib): fix #6122 add titleCache service to remote
Andreas Müller
02:38 PM Revision d7043c98 (cdmlib): Use abstract controller for identifiable controllers
Andreas Müller
02:32 PM Revision a18426a8 (cdmlib): Create and rename Identifiable(List)Controllers
Andreas Müller
02:24 PM Revision 3dfc49ed (cdmlib): fix #6122 add titleCache service
Andreas Müller
01:24 PM Revision d74d7297 (cdmlib): fx #6119 Implement uuidAndTitleCache remote services
Andreas Müller
12:48 PM Revision 53a122e4 (taxeditor): fix #6120 Cleanup uuidAndTitleCache methods
Andreas Müller
12:36 PM Revision 8d6c8a12 (cdmlib): fix #6120 Cleanup uuidAndTitleCache methods
Andreas Müller

10/05/2016

02:57 PM Revision 22738258 (taxeditor): minor
Katja Luther
02:55 PM Revision cdd0428a (taxeditor): ref #6047: add the adapted files
Katja Luther
02:52 PM Revision 79d06d0f (taxeditor): fix #6047: add the possibility to the termComboElement that the id...
Katja Luther

10/04/2016

02:26 PM Revision c5764380 (cdmlib): Minor cleanup
Andreas Müller
12:44 PM Revision fd5d8378 (cdm-dataportal): removing unsed permissions defined in cdm_api module
Andreas Kohlbecker
12:44 PM Revision b5ff8a25 (cdm-dataportal): removing unsed permissions defined in extlinks module
Andreas Kohlbecker
12:44 PM Revision c6fe437b (cdm-dataportal): fix #6115 protecting all cdm content with new permission
Andreas Kohlbecker
12:44 PM Revision 8385a9f2 (cdm-dataportal): removing unused permission
Andreas Kohlbecker
12:35 PM Revision 6a0ca989 (cdm-dataportal): fix #6114 ref #4379 avoiding empty citation feature block wit...
Andreas Kohlbecker
12:19 PM Revision 68f310fd (taxeditor): ref #5969: add remark that the nomenclatural code preference is st...
Katja Luther
12:11 PM Revision 2a7c9630 (taxeditor): ref #5969: check for db connection before ty to read the preferred...
Katja Luther

09/30/2016

09:09 PM Revision 8f3575e1 (cdmlib): add missing changes
Katja Luther
04:34 PM Revision 1600af50 (cdmlib): minor
Katja Luther
04:09 PM Revision 090cb34e (cdmlib): specimen import/search changes
Katja Luther

09/29/2016

06:09 PM Revision 7a751db4 (cdm-dataportal): fix #6114 ref #4379 avoiding empty citation feature block wit...
Andreas Kohlbecker

09/28/2016

02:55 PM Revision a299ffc0 (cdmlib-apps): cleanup IAPTImportTest
Andreas Müller

09/27/2016

12:06 PM Revision 1069d3f0 (cdm-dataportal): HOTFIX for 4.3.0
Andreas Kohlbecker
12:05 PM Revision b3b63fc8 (cdm-dataportal): HOTFIX for 4.3.0
Andreas Kohlbecker
08:55 AM Revision 0057eb30 (cdmlib): delete system.out.println from test
Katja Luther

09/26/2016

08:52 AM Revision c92df786 (taxeditor): ref #3573 Add streamlined ABCD import configurator page
Patrick Plitzner
08:36 AM Revision 84bd3966 (taxeditor): Fix label for term vocabularies in term editor
Patrick Plitzner
08:14 AM Revision dd433955 (cdm-vaadin): ref #5458 Add named areas selection box
Patrick Plitzner
06:32 AM Revision 9c1235e7 (taxeditor): Trim code
Patrick Plitzner
05:31 AM Revision ce1318e1 (cdm-vaadin): ref #5458 Enhance detail window messages
Patrick Plitzner

09/23/2016

04:47 PM Revision 190378ef (cdm-server): Merge branch 'release/4.3.0' into develop
jenkins
04:46 PM Revision 3c5d8ea0 (cdm-server): updating poms for branch'release/4.3.0' with non-snapshot versions
jenkins
04:46 PM Revision 7cafc316 (cdm-webapp): Merge branch 'release/4.3.0' into develop
jenkins
04:46 PM Revision 20c2c91a (cdm-webapp): updating poms for branch'release/4.3.0' with non-snapshot versions
jenkins
04:46 PM Revision 8b3f925a (cdm-webapp): jenkins bumping cdmlib.version and cdm.vaadin.version to 4.3.0
jenkins
04:24 PM Revision 2753ac07 (taxeditor): Merge branch 'release/4.3.0' into develop
jenkins
04:24 PM Revision 0875c8c1 (taxeditor): Merge branch 'release/4.3.0'
jenkins
03:53 PM Revision 27615a57 (cdm-vaadin): jenkins merging release branch into master (strategy: theirs)
jenkins
03:53 PM Revision 85ba0f85 (cdm-vaadin): Merge branch 'release/4.3.0' into develop
jenkins
03:51 PM Revision 9253394c (cdm-vaadin): updating poms for branch'release/4.3.0' with non-snapshot versions
jenkins
03:51 PM Revision 51a19104 (cdm-vaadin): jenkins bumping cdmlib.version to 4.3.0
jenkins
03:48 PM Revision b77c38e5 (cdm-dataportal): Merge branch 'release/4.3.0' into develop
jenkins
03:47 PM Revision 9ed30d90 (cdm-dataportal): updating poms for branch'release/4.3.0' with non-snapshot ver...
jenkins
03:47 PM Revision edab5d9f (cdm-dataportal): release-preparation: production level css
jenkins
03:37 PM Revision 24d785a7 (cdmlib): Updating develop poms back to pre merge state
jenkins
03:37 PM Revision 8eb64819 (cdmlib): Merge branch 'master' into develop
jenkins
03:37 PM Revision d735544d (cdmlib): updating develop poms to master versions to avoid merge conflicts
jenkins
03:37 PM Revision f1bba308 (cdmlib): Merge branch 'release/4.3.0'
jenkins
03:19 PM Revision c036b9c0 (cdmlib): updating poms for branch'release/4.3.0' with non-snapshot versions
jenkins
03:15 PM Revision 304b03cc (cdm-webapp): jenkins bumping cdmlib.version and cdm.vaadin.version to 4.3.0-SN...
jenkins
03:15 PM Revision a9e96f8b (cdm-webapp): updating poms for 4.4.0-SNAPSHOT development
jenkins
03:15 PM Revision dcd4cc8e (cdm-webapp): jenkins bumping cdmlib.version and cdm.vaadin.version to 4.4.0-SN...
jenkins
03:15 PM Revision 60b7d5b5 (taxeditor): Updated version in pom / project files to taxeditor version : 4.4....
jenkins
03:15 PM Revision 82b02bfc (taxeditor): Updated version in pom / project files to taxeditor version : 4.3....
jenkins
03:12 PM Revision c87034b8 (cdm-vaadin): jenkins bumping cdmlib.version to 4.3.0-SNAPSHOT
jenkins
03:12 PM Revision 24e2f0a4 (cdm-vaadin): updating poms for 4.4.0-SNAPSHOT development
jenkins
03:12 PM Revision 5043921c (cdm-vaadin): jenkins bumping cdmlib.version to 4.4.0-SNAPSHOT
jenkins
03:12 PM Revision 266b0280 (cdm-server): updating poms for 4.4.0-SNAPSHOT development
jenkins
03:12 PM Revision 1360e865 (cdm-dataportal): updating poms for 4.4.0-SNAPSHOT development
jenkins
03:09 PM Revision 16007e6b (cdmlib): updating poms for 4.4.0-SNAPSHOT development
jenkins
02:48 PM Revision 38e1c00c (cdmlib): Rename doPageChildNodes
Andreas Müller
11:40 AM Revision 45e49818 (cdmlib): ref #6065 improved Pager handling
Andreas Müller
11:06 AM Revision cb994835 (cdmlib): ref #6065 improved Pager handling and pager exception handling
Andreas Müller
11:03 AM Revision cf76baeb (cdmlib): ref #6065 Handle synonyms in taxonInContext
Andreas Müller
11:00 AM Revision 322ee472 (cdmlib): Cleanup
Andreas Müller

09/22/2016

03:33 PM Revision 38798657 (cdm-vaadin): ref #5458 Enhance user messages
Patrick Plitzner
02:10 PM Revision 316e2aa5 (cdmlib): ref #6065 fix NPEs in classification service
Andreas Müller
01:25 PM Revision d9ea157d (cdmlib): ref #6065 fix NPE in pageSize/limit
Andreas Müller
12:27 PM Revision 3b841bb7 (cdmlib): ref #6065 fix NPE in pageSize
Andreas Müller
12:00 PM Revision 6ae724c9 (cdm-vaadin): ref #5458 Fix duplicate column exception
Patrick Plitzner
11:54 AM Revision 3ed14411 (cdm-vaadin): ref #5458 Extract duplicate code
Patrick Plitzner
11:31 AM Revision 6f0224b6 (cdm-vaadin): ref #5458 Do view data binding in enter() method of table view
Patrick Plitzner
11:20 AM Revision b1a08bb1 (cdmlib): ref #6065 fix page size and add marked ancestors
Andreas Müller
10:37 AM Revision 765139ec (cdmlib): ref #6065 fix missing taxonUuid in URL
Andreas Müller
09:34 AM Revision 9f8c87ee (cdm-vaadin): ref #5458 Implement update of distribution editor via settings wi...
Patrick Plitzner

09/21/2016

09:26 PM Revision 16acec00 (taxeditor): fix transient services
Andreas Müller
05:49 PM Revision e1f5fda9 (cdmlib): ref #6065 first implementation of taxonInContext service
Andreas Müller
05:47 PM Revision 59dbcede (cdmlib): cleanup
Andreas Müller
04:30 PM Revision 3e9b93db (cdm-vaadin): ref #5458 Correctly log out of session when clicking logout button
Patrick Plitzner
03:11 PM Revision c1499ddd (cdmlib): further refactor FindByIdentifierDTO and FindByMarkerDTO
Andreas Müller
02:48 PM Revision ff5981db (cdmlib): rename FindByIdentifierDTO and FindByMarkerDTO
Andreas Müller
01:06 PM Revision 6a5d84e2 (cdm-dataportal): ref #5890 Added "Experimental" to settings description
Patrick Plitzner
12:00 PM Revision 5eb888b1 (cdmlib-apps): ref #5448 Remove unnecessary saving
Patrick Plitzner
12:00 PM Revision a3140a55 (cdmlib-apps): ref #5448 Enhance name checking
Patrick Plitzner
11:26 AM Revision 19c7c9f3 (cdmlib): Revert "fix #6037 per batch transction commit implemented for excel i...
This reverts commit 53067226137bd8528e6bc26f21edbf98aebe26a9. Andreas Kohlbecker
11:14 AM Revision 7dcb230b (taxeditor): fix transient service
Andreas Müller
10:51 AM Revision b661d598 (cdmlib): ref #6066 rename childNodes to childNodesByTaxon in ClassificationCon...
Andreas Müller
10:07 AM Revision e5fa5ee8 (cdmlib): ref #6066 add getChildNodes to classification service
Andreas Müller
09:45 AM Revision 03e96dec (taxeditor): also add null check in comparator of nomenclaturalReferenceSelecti...
Katja Luther
09:37 AM Revision 28027bed (taxeditor): fix #6061: add a null check for abbrevTitleCache and titleCache in...
Katja Luther

09/20/2016

05:28 PM Revision f58a08fa (cdm-dataportal): fixing minor bug related to taxonomic children block
Andreas Kohlbecker
05:17 PM Revision 8f2cbbc0 (cdm-dataportal): ref #6087 resizable area filter widget finetuning
Andreas Kohlbecker
05:17 PM Revision c079337e (cdm-dataportal): fix #6087 sorting areas by orderIndex
Andreas Kohlbecker
05:16 PM Revision 6dbfb2ec (cdmlib): ref #6087 adding orderINdex to TermDTO
Andreas Kohlbecker
04:59 PM Revision 0e9a6a75 (taxeditor): ref #5616 Generalize evaluation of available CdmViewers
Patrick Plitzner
04:22 PM Revision 6b605d3b (cdm-dataportal): ref #6087 area filter widget more initial size and resizeable
Andreas Kohlbecker
03:15 PM Revision 016cfa57 (taxeditor): Compare taxon editor input based on taxon instead of taxon node (R...
93c6e0a894d2e4b0c9df6c7c3feff2f20e0b9e38) Patrick Plitzner
02:49 PM Revision db09bbf4 (taxeditor): fix #6101: add a check for multilanguage preference
Katja Luther
01:51 PM Revision cdbf325e (cdmlib): ref #6066 fix Index out of bound exception
Andreas Müller
01:44 PM Revision 92634d22 (taxeditor): ref #5616 Fix class check for bulk editor porperty tester
- handle UuidAndTitleClache Patrick Plitzner
12:23 PM Revision dd2c540b (cdmlib-apps): fix #6035 one more broken character
Andreas Kohlbecker
11:45 AM Revision dc4d1922 (cdmlib-apps): fix #6093 including more taxa into algea registry import
Andreas Kohlbecker

09/19/2016

09:50 PM Revision ccf3875f (taxeditor): ref #6082 try to fix dependency issues in managed TaxEditor
Andreas Müller
03:45 PM Revision 09ab8026 (taxeditor): fix #6082 fixing incomplete entries in the eu.etaxonomy.taxeditor....
Andreas Kohlbecker
02:39 PM Revision cc330739 (taxeditor): i18n for view titles
Patrick Plitzner
02:39 PM Revision 18fd7dae (taxeditor): Generalize title creation for cdm view parts
Patrick Plitzner
02:39 PM Revision 93c6e0a8 (taxeditor): Compare taxon editor input based on taxon node instead of taxon
Patrick Plitzner
02:14 PM Revision 3c85c23f (cdmlib-apps): ref #6097 filter to include algae only - better match pattern
Andreas Kohlbecker
01:45 PM Revision 4ca412d5 (taxeditor): fix #5607: add sec reference to property path solves the problem o...
Katja Luther
01:33 PM Revision 6a1ec853 (cdmlib-apps): #6097 filter to include algae only
Andreas Kohlbecker
01:33 PM Revision 91b69818 (cdmlib-apps): moving TestDatabase back to main - a couple of classes had compl...
Andreas Kohlbecker
01:22 PM Revision 2dab7ea0 (taxeditor): remove System.out.println...
Katja Luther
01:12 PM Revision 40dfdbc5 (cdmlib): fix #6061: search in titlecache and nomenclatural titleCache in getUu...
Katja Luther
01:07 PM Revision bfc8d3b4 (taxeditor): fix #6056: when creating checklisteditorInput don't init session a...
Katja Luther
10:08 AM Revision c38ba443 (cdmlib): fix failing IPNI Service Test
Katja Luther
09:29 AM Revision 4764fee3 (cdmlib-apps): removing duplicate repository
Andreas Kohlbecker
08:19 AM Revision ceece5d1 (cdmlib-apps): Merge branch 'IAPT'
Conflicts:
app-import/.gitignore
app-import/pom.xml
Andreas Kohlbecker
08:16 AM Revision 67432178 (cdmlib-apps): move test classes in app-import
Andreas Müller
 

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