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From 08/28/2016 to 09/26/2016

09/26/2016

05:25 PM feature request #6110 (Closed): Use https for map service calls when the portal is access via https
Andreas Kohlbecker
03:17 PM feature request #6076: Specimen search should work on observations
The specimen search works only for preserved specimen, but should return all kind of specimen.
Therefore the filte...
Katja Luther
01:33 PM feature request #6076 (In Progress): Specimen search should work on observations
Please add some more information what it is all about. Andreas Müller
02:38 PM feature request #5969 (Resolved): Implement CdmPreference reading for database preferences
In Revision 4625a011 a check for the existence of the preference in DB is added. Katja Luther
01:48 PM bug #6051: Add toggle button for simple details view for names
try to synchronize with same issue in media view Andreas Müller
01:13 PM bug #4348: Remove InputDialog in creating new bulk editor entities where not needed
Explain solution with wizards and create new tickets for all required wizards. Andreas Müller
12:18 PM feature request #5185 (Worksforme): drag & drop for descriptions and descriptionElements
Drag & drop works fine. But after creating a new Description you have to save before move a descriptionelement to the... Katja Luther
10:15 AM feature request #5185: drag & drop for descriptions and descriptionElements
Is this still open. Adapt target version if closed. Andreas Müller
12:17 PM bug #6109 (Worksforme): Drag & Drop after creating a new description fails
When creating a new description and try to move a description element to this new description without saving throws t... Katja Luther
10:36 AM bug #6042: Campanula portal TODOS
Please create sub tasks and add mails as comments Andreas Müller
10:24 AM bug #6077 (Resolved): Import of gathering images
Andreas Müller
09:39 AM bug #6088: New reproducable multiple representations exception for name relationships
I think I could find when this exception occurs: Always when using a name already opened in bulk editor to create the... Katja Luther

09/23/2016

03:20 PM feature request #6066 (Closed): Edaphobase DTO for getChildrenTaxaOfId
Andreas Müller
02:00 PM feature request #6066 (Resolved): Edaphobase DTO for getChildrenTaxaOfId
Andreas Müller
02:00 PM feature request #6066: Edaphobase DTO for getChildrenTaxaOfId
New version in classification controller:
http://test.e-taxonomy.eu:80/cdmserver/edaphobase_test/classification/5d...
Andreas Müller
03:16 PM bug #6073 (Closed): Fix groupByHigherTaxon webservice
Andreas Müller
02:52 PM bug #6071 (In Progress): Handle Taxonomische Großgruppen correctly in Edaphobase
Offen:
~~Import~~
Evtl. Offen:
... ~~und danach soll eine Liste von Taxa gruppiert werden können~~
Andreas Müller
02:41 PM bug #6072: Implement getTaxonomicGroups for Edaphobase
Open issue: handle includeEntity correctly Andreas Müller
02:40 PM bug #6072: Implement getTaxonomicGroups for Edaphobase
This has been solved by implementing findByMarker similar to findByIdentifier.
Example:
http://test.e-taxonomy...
Andreas Müller
02:28 PM bug #6064: Edaphobase problems with webservices
Beispiel für grouping: http://test.e-taxonomy.eu:80/cdmserver/edaphobase_test/classification/5d9865e6-84fe-4fff-b36b-... Andreas Müller
12:16 PM feature request #6065 (Resolved): Edaphobase DTO for getTaxonById
Still to test: fehlerhafte UUIDs sollten zu 404 (Reseource not found) Fehler führen. Andreas Müller
12:14 PM feature request #6065: Edaphobase DTO for getTaxonById
Examples:
Taxon with child and synonym:
http://test.e-taxonomy.eu:80/cdmserver/edaphobase_test/classification/5...
Andreas Müller

09/22/2016

11:27 AM bug #6108 (New): Too many columns exception when selecting TDWG areas in distribution area
~~~
Sep 22, 2016 11:26:11 AM com.vaadin.data.util.sqlcontainer.SQLContainer getPropertyIds
Warnung: Failed to fetch...
Patrick Plitzner

09/21/2016

03:19 PM task #6107 (New): Establish performance monitoring
The suggestions given in https://www.infoq.com/articles/Diagnose-Microservice-Performance-Anti-Patterns could help us... Andreas Kohlbecker
01:07 PM feature request #5890: Implement auto-suggest for data portal
Added "Experimental" to settings description
Should we move this feature to 4.4?
Patrick Plitzner
01:03 PM feature request #5969: Implement CdmPreference reading for database preferences
If no datasource is selected an NPE occurs:
~~~
login :
editor version : 4.3.0.201609201350
server : /
sche...
Andreas Müller
12:05 PM feature request #5969: Implement CdmPreference reading for database preferences
The implementation in the local preferences UI works well now and I think we can close the ticket.
But maybe we ca...
Andreas Müller
12:04 PM bug #6106 (New): [Discuss] Handle rights and roles for CdmPreferences
Currently every user can change CdmPreferences.
Do we need a new role "CdmPreferenceAdmin" or should the right be ...
Andreas Müller
11:45 AM bug #6086 (Closed): Percentage value in ProgressMonitor accuratly rounded
This seems to be fully solved. Andreas Kohlbecker
11:30 AM bug #6105 (Resolved): Make CdmPreferences editable in separate view
We started editing CdmPreferences in #5969. This is experimental as the UI mixes local preferences with CdmPreference... Andreas Müller
11:30 AM feature request #6037 (Rejected): Allow intermediate commits in Excel import
This would be nice to have but did not work after the initial implementation, solving the errors seems not worth it. ... Andreas Kohlbecker
09:39 AM bug #6061 (Closed): Add titlecache to nom author search
Katja Luther
09:37 AM bug #6061 (Resolved): Add titlecache to nom author search
Applied in changeset taxeditor:commit:taxeditor|28027bed8148feb8c9a3cfdbd7e203e62ad51733. Katja Luther
09:32 AM bug #6061: Add titlecache to nom author search
Andreas Müller wrote:
> With the above example Aaaa/Bbbb I get the following exception when exactly searching for "*...
Katja Luther

09/20/2016

11:46 PM bug #6019 (Closed): Link to changeset does not work yet
this works now in the production version Andreas Kohlbecker
11:44 PM task #6006 (Closed): setup automatic refresh of repositories in Redmine
No problems so far, the refresh works for all configured repos. Andreas Kohlbecker
11:41 PM bug #6104 (New): install gitolite
The git repos need an access control and a general management layer.
Gitolite seems to be the best choice: http://...
Andreas Kohlbecker
06:41 PM bug #6100: Name parser problems
Hallo Andreas,
korrekter Sonderfall des Brummitt & Powell Standard:
Da R.Br. 3x vorhanden ist, ist der erste R....
Andreas Kohlbecker
12:55 PM bug #6100 (In Progress): Name parser problems
When running the IAPT import (#6026) a lot of names can not be parsed.
For a better overview I split the affected...
Andreas Kohlbecker
06:36 PM task #6020 (Feedback): Consider replacing custom field 'keywords' by redmine_tags
could you do the xcheck once again? Andreas Kohlbecker
06:35 PM task #6020: Consider replacing custom field 'keywords' by redmine_tags
This is fixed now. Andreas Kohlbecker
05:53 PM task #6020: Consider replacing custom field 'keywords' by redmine_tags
Da scheint es leider noch Probleme zu geben.
2 Beispiele: http://130.133.70.38/redmine/issues/1420 sollte Tags Fa...
Andreas Kohlbecker
05:50 PM task #6029: trac resolution to redmine status mapping invalid for `wontfix` and `invalid`
problem solved in awk script
please test again.
Andreas Kohlbecker
05:18 PM bug #6087: Top level items not sorted in tree of advanced search areaFilter widget
Please test again. All remaining issues are solved. Andreas Kohlbecker
05:17 PM bug #6087 (Resolved): Top level items not sorted in tree of advanced search areaFilter widget
Applied in changeset commit:cdm-dataportal|c079337e19b7aa2b7e23a64a78da5085b92029ee. Andreas Kohlbecker
04:59 PM feature request #5616: Add the"Open in..." menu to taxon search
Andreas Müller wrote:
> Better now but still some issues:
>
> * For pure names (not related to taxa) the right cl...
Patrick Plitzner
04:29 PM feature request #5616: Add the"Open in..." menu to taxon search
Better now but still some issues:
* For pure names (not related to taxa) the right click menu does not show up at ...
Andreas Müller
01:45 PM feature request #5616: Add the"Open in..." menu to taxon search
Fixed in taxeditor:commit:taxeditor|92634d22a080f6de8af639dae12fe771cda64ceb Patrick Plitzner
04:00 PM feature request #6103 (New): Refactor name editor to be based on taxon nodes
Currently the TaxonEditorInput and the name editor are based on taxa. The editor input already stores the taxon node ... Patrick Plitzner
02:49 PM bug #6101 (Resolved): NPE when having multiple lanugage support disabled
Applied in changeset taxeditor:commit:taxeditor|db09bbf4cace84076e5fadb241440655b734827f. Katja Luther
02:11 PM bug #6101 (Closed): NPE when having multiple lanugage support disabled
This happens when doing a right-click in the feature term editor
Some GUI elements are not initialised when multi ...
Patrick Plitzner
02:30 PM feature request #6102 (New): advanced taxon search offers filter on distribution status
successor of #4497
The area filter in the advanced search needs to be complemented with a filter for the distribut...
Andreas Kohlbecker
02:26 PM feature request #6041: Change the label of "Set as basionym of homotypical group"
Katja Luther wrote:
> Andreas Müller wrote:
> > But first revert the already existing changes!!!
>
> It is alrea...
Andreas Müller
02:23 PM feature request #6041: Change the label of "Set as basionym of homotypical group"
Andreas Müller wrote:
> But first revert the already existing changes!!!
It is already reverted see Revision 6e57...
Katja Luther
02:00 PM feature request #6041: Change the label of "Set as basionym of homotypical group"
But first revert the already existing changes!!! Andreas Müller
10:24 AM feature request #6041: Change the label of "Set as basionym of homotypical group"
This needs to be discussed in User Meeting, move it to Release 4.4 and decide then if we change it or not. Katja Luther
02:24 PM bug #6061 (Feedback): Add titlecache to nom author search
With the above example Aaaa/Bbbb I get the following exception when exactly searching for "*B".
Entering "*Bb" works...
Andreas Müller
01:48 PM bug #6084 (Closed): NPE when opening the checklist editor with no areas selected in preferences
works fine Patrick Plitzner
10:50 AM feature request #6066 (Feedback): Edaphobase DTO for getChildrenTaxaOfId
Andreas Müller
10:49 AM feature request #6066: Edaphobase DTO for getChildrenTaxaOfId
Getestet unter http://test.e-taxonomy.eu/cdmserver/edaphobase_test/doc/?group=Generic%20REST%20API#!/taxon-node-contr... Andreas Müller
10:13 AM bug #6082: Local managed server in Taxeditor fails during start
To be honest I am not sure which of the 3 changes was the crucial one and if they are all required.
I only remembe...
Andreas Müller
10:05 AM bug #6082 (Closed): Local managed server in Taxeditor fails during start
Yes this change actually fixes the problem. Howver, it is strange that it is necessary to explicitly name all jars in... Andreas Kohlbecker
10:11 AM bug #6099: Duration of save is increasing
the time consuming call is CdmStore.getService(ITaxonNodeService.class).merge(taxonNode, true);
Katja Luther
10:09 AM bug #6099 (Closed): Duration of save is increasing
Hallo Andreas,
also das Speicherns dauert nach Neuanlegen einer Common names bei Hieracium immer noch unerträglich...
Katja Luther

09/19/2016

10:14 PM bug #6082 (Resolved): Local managed server in Taxeditor fails during start
commit:taxeditor|ccf3875f seems to fix the problem.
Please check.
Andreas Müller
05:16 PM bug #6082 (Feedback): Local managed server in Taxeditor fails during start
The changes committed before did apparently not solve the problem.
The latest build made by jenkins still was having...
Andreas Kohlbecker
03:45 PM bug #6082 (Resolved): Local managed server in Taxeditor fails during start
Applied in changeset taxeditor:commit:taxeditor|09ab8026ce80a7f76ad3bc250f303aee986c3dab. Andreas Kohlbecker
03:44 PM bug #6082: Local managed server in Taxeditor fails during start
this seems to be caused by incomplete entries in the `eu.etaxonomy.taxeditor.webapp/build.properties` Andreas Kohlbecker
03:31 PM bug #6082: Local managed server in Taxeditor fails during start
This does not happen from within the IDE and the eu.etaxonomy.taxeditor.webapp_4.3.0.201609190837.jar of the lastets ... Andreas Kohlbecker
02:03 PM bug #6098 (New): Improve session handling for TaxonNavigator and newTaxonNodeWizard
related to #5607.
It looks like the reason is that the assistant is using the navigator session and the navigator...
Katja Luther
01:33 PM bug #6087 (Feedback): Top level items not sorted in tree of advanced search areaFilter widget
Andreas Müller
01:33 PM bug #6087: Top level items not sorted in tree of advanced search areaFilter widget
The ordering is now alphabetic but not according to the ordering in the vocabular as written in the description (espe... Andreas Müller
01:12 PM bug #6061 (Resolved): Add titlecache to nom author search
Applied in changeset cdmlib:commit:cdmlib|40dfdbc5479f32292017fadeca45b8424dda4896. Katja Luther
01:10 PM bug #6061: Add titlecache to nom author search
Andreas Müller wrote:
> Deduplication of equals caches looks good now.
>
> Search on titleCache does not yet work...
Katja Luther
01:06 PM bug #6061: Add titlecache to nom author search
Deduplication of equals caches looks good now.
Search on titleCache does not yet work. E.g. create a Person with n...
Andreas Müller
01:08 PM bug #6056 (Resolved): Checklist Editor does not close session
Applied in changeset taxeditor:commit:taxeditor|bfc8d3b4b4853357b40551eca7a283ce68bbe865. Katja Luther

09/16/2016

05:30 PM bug #6072 (Resolved): Implement getTaxonomicGroups for Edaphobase
Applied in changeset cdmlib:commit:cdmlib|65b68496361721de9312edbb53f02ecb2c77b12b. Andreas Müller
04:34 PM bug #5680: Out-of-Memory when editing TaxonInteraction
Katja Luther wrote:
> another problem with Families in other Floras:
>
>
> creation of a new Families in other ...
Katja Luther
11:35 AM bug #6056: Checklist Editor does not close session
I found the problem: When disposing the session, the session should be removed from the sessionManager, but the get(o... Katja Luther

09/15/2016

11:08 PM task #6089 (In Progress): Remove taxonomicParentCache and taxonomicChildrenCount from Taxon
Andreas Müller
11:08 PM task #6089 (Closed): Remove taxonomicParentCache and taxonomicChildrenCount from Taxon
Andreas Müller
06:13 PM feature request #6066 (Resolved): Edaphobase DTO for getChildrenTaxaOfId
Applied in changeset cdmlib:commit:cdmlib|a295b517875ed51a93997bf044543e04b8c2351a. Andreas Müller
04:52 PM bug #6088 (Closed): New reproducable multiple representations exception for name relationships
What I did:
* Goto name bulk editor and create 2 new names: *Related name One* and *Related name Two*.
* Make R...
Andreas Müller
02:40 PM bug #6086: Percentage value in ProgressMonitor accuratly rounded
Can you please check if this fixes the problem? Andreas Müller
02:38 PM bug #6086: Percentage value in ProgressMonitor accuratly rounded
Experience shows (see class DefaultProgressMonitorTest) that rounding errors mostly appear when SubProgressMonitors a... Andreas Müller
02:28 PM bug #6086: Percentage value in ProgressMonitor accuratly rounded
Ceil is not the correct method, use round instead, otherwise the result is only rounded into one direction. Andreas Müller
11:55 AM bug #6086 (Closed): Percentage value in ProgressMonitor accuratly rounded
The percentage value on the progress of the indexing process is often reported as 99,99% when the job is completet.
...
Andreas Kohlbecker
01:26 PM bug #6061: Add titlecache to nom author search
now searching with * at the beginning of the search pattern searches on abbrevTitleCache and titleCache
Katja Luther
09:59 AM bug #6061: Add titlecache to nom author search
Katja Luther wrote:
> Katja Luther wrote:
> > Andreas Müller wrote:
> > > Katja Luther wrote:
> > > > ... but the...
Katja Luther
09:25 AM bug #6061: Add titlecache to nom author search
Andreas Müller wrote:
> Search on titleCache with * at the beginning (additionally to the nom.title) still does not ...
Katja Luther
09:12 AM bug #6061: Add titlecache to nom author search
Katja Luther wrote:
> Andreas Müller wrote:
> > Katja Luther wrote:
> > > ... but the object already selected does...
Katja Luther
08:55 AM bug #6061: Add titlecache to nom author search
Andreas Müller wrote:
> Katja Luther wrote:
> > ... but the object already selected does not show up in the selecti...
Katja Luther
01:20 PM feature request #5969: Implement CdmPreference reading for database preferences
there was no check whether the preference is already in DB, now if the preference could not find in DB the local one ... Katja Luther
11:50 AM feature request #5969 (Feedback): Implement CdmPreference reading for database preferences
When trying to open Preferences-Taxonomic-NomenclaturalCode I got an NPE:
~~~
login : admin
editor version : 4.3...
Andreas Müller
12:26 PM bug #6087 (Resolved): Top level items not sorted in tree of advanced search areaFilter widget
Applied in changeset commit:cdm-dataportal|fdf52d6a1031775b9ec229df88bb0a84ad54649a. Andreas Kohlbecker
12:24 PM bug #6087 (Closed): Top level items not sorted in tree of advanced search areaFilter widget

ich sehe gerade, dass zumindest bei Cuba http://portal.cybertaxonomy.org/flora-cuba/cdm_dataportal/search die Areal...
Andreas Kohlbecker
12:01 PM task #6029: trac resolution to redmine status mapping invalid for `wontfix` and `invalid`
http://130.133.70.38/redmine/issues/226 still has status closed instead of rejected, though it was a won't fix (http... Andreas Müller
10:44 AM task #6029 (Feedback): trac resolution to redmine status mapping invalid for `wontfix` and `inval...
I implemented a repair script (attached).
Please can you (a.mueller) xcheck to confirm that the fix is working
...
Andreas Kohlbecker

09/14/2016

10:05 PM task #6020: Consider replacing custom field 'keywords' by redmine_tags
1. NOTE: This plugin seems not to support 'Bulk edit' :(
2. Updating the migration scripts
Andreas Kohlbecker
04:06 PM task #6020: Consider replacing custom field 'keywords' by redmine_tags
migration scripts are ready, see attachments Andreas Kohlbecker
05:52 PM bug #6054 (Closed): classification breadcrumb navigation broken in IE and MS Edge
I tested with IE11 on test with cuba and it works correctly. So I guess it is fixed. Andreas Müller
05:46 PM bug #6061: Add titlecache to nom author search
Search on titleCache with * at the beginning (additionally to the nom.title) still does not work. Is this difficult t... Andreas Müller
05:41 PM bug #6061: Add titlecache to nom author search
Ordering and dot search seem to work well now. Andreas Müller
05:40 PM bug #6061: Add titlecache to nom author search
Katja Luther wrote:
> ... but the object already selected does not show up in the selection dialog. This is the same...
Andreas Müller
05:35 PM bug #6061 (Feedback): Add titlecache to nom author search
If titleCache is same as nomTitle both versions are still shown. See note-#2 Andreas Müller
12:31 PM bug #6061: Add titlecache to nom author search
The ordering works now on the abbrev title and the search works for strings with a point at the end, but the object a... Katja Luther
05:11 PM bug #6085 (New): Use lucene auto suggest functionality for improved auto suggest
Check if lucene auto-suggest functionality can be used. Currently we only use standard freetext search which leads e.... Andreas Müller
04:59 PM feature request #5890: Implement auto-suggest for data portal
Andreas Müller wrote:
> Also I do not understand why the flag to switch on auto-completion is put to Settings - Gene...
Andreas Müller
04:21 PM feature request #5890: Implement auto-suggest for data portal
Also I do not understand why the flag to switch on auto-completion is put to Settings - General - CdmServer - FreeTex... Andreas Müller
04:18 PM feature request #5890 (Feedback): Implement auto-suggest for data portal
When trying to run on http://test.e-taxonomy.eu/dataportal/preview/flora-cuba/ and searching for "Barler" I got an po... Andreas Müller
03:24 PM bug #6062: NPE in RefencingObjects for TaxonNameDescription
The NameDescription NPE is not thrown anymore but I would like to first wait until the regression in #5616 is fixed u... Andreas Müller
09:25 AM bug #6062 (Resolved): NPE in RefencingObjects for TaxonNameDescription
Applied in changeset taxeditor:commit:taxeditor|f3fb72fdaf40e993eeec1f606bfd88caeba06898. Patrick Plitzner
09:18 AM bug #6062: NPE in RefencingObjects for TaxonNameDescription
I could only reproduce the last mentioned NPE once because I had not selected any areas. After selecting areas I coul... Patrick Plitzner
08:04 AM bug #6062: NPE in RefencingObjects for TaxonNameDescription
I added a property tester to check if the item can be shown depending on whether or not there is a bulk editor for th... Patrick Plitzner
03:13 PM feature request #6059 (Closed): Save expand state more individually
Both seem to work fine, subsections as well as supplemental data view.
We may open new tickets for other views if ...
Andreas Müller
02:48 PM feature request #5616 (Feedback): Add the"Open in..." menu to taxon search
Now it does not offer bulkeditor at all anymore, not for pure names, not for orphaned taxa and not for ordinary taxa/... Andreas Müller
12:04 PM bug #6084 (Resolved): NPE when opening the checklist editor with no areas selected in preferences
Applied in changeset taxeditor:commit:taxeditor|6ac3c9c18cc95fd462d8e2ce82dcb0904cce7c6e.
the problem was the not ...
Katja Luther
09:14 AM bug #6084 (Closed): NPE when opening the checklist editor with no areas selected in preferences
You can reproduce this by deleting the preferences for the checklist editor in `.cdmLibrary/.metadata/.plugins/org.ec... Patrick Plitzner
10:33 AM bug #6063: redmine Inheritable issue categories
The latest patch inherit_cats_2.5.1.stable.13138.patch.gz can not be applied to the version 3.3.0 Andreas Kohlbecker
10:05 AM feature request #6076: Specimen search should work on observations
... should work on all types of "RecordBasis" (wenn es um Importe oder Specimeneingaben geht, AlgaTerra hat z.B. Liv... Wolf-Henning Kusber

09/13/2016

06:43 PM task #6020: Consider replacing custom field 'keywords' by redmine_tags
During installation, more specifically at `bundle install` the following information is printed out.
This might be i...
Andreas Kohlbecker
04:25 PM bug #6082 (Closed): Local managed server in Taxeditor fails during start

~~~~
login :
editor version : 4.3.0.201609131149
server : /
schema version :
os : Linux 3.19.0-59-generi...
Andreas Kohlbecker
04:17 PM bug #6075: harmonize ' Enable auto-suggest' option with existing code
Sorry I confused this setting, it is on the taxon search fields.
I am correcting the issue description ...
Andreas Kohlbecker
01:54 PM bug #6075 (Closed): harmonize ' Enable auto-suggest' option with existing code
# 1)
The `[] Enable auto-suggest for taxon search` is currently in the freetext index settings.
This option sh...
Andreas Kohlbecker
03:37 PM bug #6062 (In Progress): NPE in RefencingObjects for TaxonNameDescription
Patrick Plitzner
03:23 PM feature request #6081 (New): [Specimen Search] Import report should be saved
The import report should be saved on an accessible place. So the user can reproduce what was imported correctly and w... Katja Luther
03:20 PM feature request #6080 (New): [Specimen Search] TitleCache should be configurable
It should be possible to configure the order and the content of the titlecache Katja Luther
03:17 PM bug #6079 (New): [Specimen Search] Restructure the table of search result
The table should be restructured:
- the protocol is not needed
- important are scientific name, catalogue number, l...
Katja Luther
03:09 PM bug #6078 (Resolved): import of references in specimen search
The import of references are missing in GBIF and biocase import Katja Luther
03:07 PM bug #6077 (Closed): Import of gathering images
The gathering images are imported if the import comes from a bioase provider, for a Darwin Core Archive provider it d... Katja Luther
03:05 PM feature request #6076 (Resolved): Specimen search should work on observations
Actually the specimen seach only works on Specimen, it should also search for observations. Katja Luther
01:48 PM feature request #5969 (Resolved): Implement CdmPreference reading for database preferences
first implementation added.
Katja Luther
01:35 PM feature request #5616 (Resolved): Add the"Open in..." menu to taxon search
Applied in changeset taxeditor:commit:taxeditor|30afcea01068a7e0dcd2bde6b9a5f28e4bbcdd6f. Patrick Plitzner
12:55 PM bug #6054: classification breadcrumb navigation broken in IE and MS Edge
Please can you confirm that this is fixed? Andreas Kohlbecker
12:47 PM bug #6054 (Resolved): classification breadcrumb navigation broken in IE and MS Edge
Applied in changeset commit:cdm-dataportal|09edee9ae258bebe52d37c98f000257c365a8768. Andreas Kohlbecker
11:37 AM feature request #3573 (In Progress): Improve EDITOR import UI configuration panel
Patrick Plitzner
11:28 AM feature request #6059 (Resolved): Save expand state more individually
Applied in changeset taxeditor:commit:taxeditor|38eaa3c8c34ceeb65e29b7647a4bba1696e7ed4e. Patrick Plitzner
10:13 AM feature request #6059 (In Progress): Save expand state more individually
Patrick Plitzner
10:38 AM bug #6074 (New): test for the name catalogue service
the name catalogue has failed in the past an no one noticed it: #5860
We already have tests for the catalogue (htt...
Andreas Kohlbecker
10:28 AM bug #6057 (Closed): Name parser fails parsing author names with ` U+0060 GRAVE ACCENT
this works now. Thank you! Andreas Kohlbecker
10:26 AM bug #6060 (Closed): Name parser fails parsing author names with - U+002D HYPHEN-MINUS
this works now. Thank you. Andreas Kohlbecker

09/12/2016

05:17 PM bug #6073 (Resolved): Fix groupByHigherTaxon webservice
Andreas Müller
05:11 PM bug #6073 (Closed): Fix groupByHigherTaxon webservice
see #5957 Andreas Müller
05:07 PM bug #6072 (Closed): Implement getTaxonomicGroups for Edaphobase
Gibt eine Liste (id + Name) mit allen taxonomischen Großgruppen zurück. Beispielsweise Collembola Andreas Müller
05:00 PM bug #6071 (Closed): Handle Taxonomische Großgruppen correctly in Edaphobase

* Thema Taxonomische Großgruppen/Funktion getTaxonomicGroups
* Das ist bei uns keine extra Ebene sondern eine Eig...
Andreas Müller
03:00 PM bug #6061 (Resolved): Add titlecache to nom author search
Applied in changeset cdmlib:commit:cdmlib|bdac48c7613040ed609183f74552333ef1fb626c. Katja Luther
02:52 PM feature request #6043: Name export for JACQ
Select for the export of accepted taxa:
~~~ sql
SELECT tnb.uuid,
tnb.genusOrUninomial as genus, tnb.specific...
Katja Luther
01:45 PM feature request #6070 (New): Implement IPNI style name export
This format is required e.g. by JACQ. For an example see #6043
.
This export should be more generic:
* write in...
Andreas Müller
01:37 PM bug #6032 (Rejected): Name parser support for hybrid ranks
Andreas Müller
01:34 PM bug #6032 (Closed): Name parser support for hybrid ranks
Patrick Plitzner
10:29 AM bug #6067: CdmEagerLoadingException after having multiple editors open for ~4 hours
Andreas Müller wrote:
> So it is you who deleted data in the meanwhile?
>
Exaclty, the old data was deleted when ...
Andreas Kohlbecker
10:18 AM bug #6067: CdmEagerLoadingException after having multiple editors open for ~4 hours
So it is you who deleted data in the meanwhile?
However, the general transaction problem exist. No matter if an ob...
Andreas Müller
10:04 AM bug #6067: CdmEagerLoadingException after having multiple editors open for ~4 hours
Henning was about to close some views/editors when this happened.
I think that this exception related to the fresh...
Andreas Kohlbecker
09:50 AM bug #6067: CdmEagerLoadingException after having multiple editors open for ~4 hours
The relevant code is at CdmGenericDaoImpl.initializeCollection(UUID ownerUuid, ...) line 784
~~~ java
CdmBase ...
Andreas Müller
09:23 AM bug #6067 (New): CdmEagerLoadingException after having multiple editors open for ~4 hours
Hallo,
nachdem ich über 40 Fenster über lange Zeit (mehrere Stunden) offen hatte, bekam ich die Fehlermeldungen
VG
...
Andreas Kohlbecker

09/09/2016

05:06 PM feature request #6065 (In Progress): Edaphobase DTO for getTaxonById
Andreas Müller
05:02 PM feature request #6065 (Closed): Edaphobase DTO for getTaxonById
Gibt das Taxon-Objekt zu einer ID zurück. Das Taxon muss mindestens enthalten: Name, Namensbestandteile, Rang, Typ, K... Andreas Müller
05:06 PM feature request #6066 (Closed): Edaphobase DTO for getChildrenTaxaOfId
Gibt alles zurück, was direkt unter dem angegebenen Taxon im Baum hängt (Kindtaxa und Synonyme). Der Eintrag besteht ... Andreas Müller
04:21 PM bug #6064 (In Progress): Edaphobase problems with webservices
* /portal/taxon/{uuid}
* Synonymbeziehungen nicht erkennbar (valide Taxa der Synonyme und Synonyme der validen Taxa...
Andreas Müller
03:57 PM bug #6063 (New): redmine Inheritable issue categories
see
* http://www.redmine.org/issues/11898 (Patch)
* http://www.redmine.org/issues/5358 (Issue)
On How to appl...
Andreas Kohlbecker
02:14 PM bug #6062: NPE in RefencingObjects for TaxonNameDescription
Found in nightly build 4.3.
Please check also for other types. I checked HomotypicalGroups and it was ok. For Taxo...
Andreas Müller
02:05 PM bug #6062 (Closed): NPE in RefencingObjects for TaxonNameDescription
Currently the referencing objects view offers "Open in bulk editor" for objects of type TaxonNameDescription (created... Andreas Müller
01:50 PM bug #6061: Add titlecache to nom author search
Some more critical issues:
1. Ordering works on titleCache now but one would expect it to work on nomCache. E.g. i...
Andreas Müller
01:13 PM bug #6061 (Feedback): Add titlecache to nom author search
The fix generally works, but we should further improve it.
1. If nomTitleCache and titleCache is equal we should s...
Andreas Müller
01:01 PM bug #6061 (Closed): Add titlecache to nom author search
split from #5828
1 additional improvement would be to additionally add the titleCache in brackets after the abbrev...
Andreas Müller
09:46 AM task #6006: setup automatic refresh of repositories in Redmine
I tested the hook, it works! Andreas Kohlbecker
08:27 AM task #6006: setup automatic refresh of repositories in Redmine
the SVN is no longer synced with the git repositories. The svn repos which have been migrated to git are only archive... Andreas Kohlbecker

09/08/2016

09:58 PM task #1606: Restrict filtered selection of in references to the respective reference types
This might still be an interesting open issue. Discuss with users. Andreas Müller
09:56 PM feature request #1362: Version number should be located at one place
Is this still an open issue? Andreas Müller
04:51 PM bug #6060 (Resolved): Name parser fails parsing author names with - U+002D HYPHEN-MINUS
Applied in changeset commit:cdmlib|9d20b400f4dfa58e78a27a00e5215ea2d563273d. Andreas Müller
04:22 PM bug #6060 (Closed): Name parser fails parsing author names with - U+002D HYPHEN-MINUS
For example:
* Thamniopsis stenodictyon (Sehnem) Oliveira-e-Silva & O.Yano (FAILS)
* Thamniopsis stenodictyon (Se...
Andreas Müller
04:24 PM bug #6057: Name parser fails parsing author names with ` U+0060 GRAVE ACCENT
Moved "hyphen" case to new ticekt #6060 Andreas Müller
03:43 PM bug #6057 (Resolved): Name parser fails parsing author names with ` U+0060 GRAVE ACCENT
Applied in changeset cdmlib:commit:cdmlib|d24cf23ca4d303a0b8a29a101097f6bd30cd022d. Andreas Müller
11:09 AM feature request #6059 (Closed): Save expand state more individually
copied from #5953:
Seems to work well for all top level sections of the details view.
We may also want to have ...
Patrick Plitzner
11:08 AM bug #6049 (Closed): Improve (area) filter handling for selection dialogs
created new issue for remainig issues -> #6058 Patrick Plitzner
11:07 AM feature request #6058 (Closed): Store NamedArea dialog filters more individually
copied from #6049 :
Remembering the old filters works well even when changing the datasource or reopening the edit...
Patrick Plitzner
09:43 AM feature request #4488: Specimen data points in map should show FieldUnit information
@Andreas K.: Could the first solution be implemented by the map service itself? Patrick Plitzner
09:31 AM feature request #4488: Specimen data points in map should show FieldUnit information
moving valid Campanula ticket to Unassigned milestone Patrick Plitzner
09:36 AM task #3249: [DISCUSS] Free text search for specimen details
moving valid Campanula ticket to Unassigned milestone Patrick Plitzner

09/07/2016

11:37 PM bug #5982 (Closed): editing the protected titleCache set sometimes the focus to the name editor
Seems to work well and can be closed Andreas Müller
11:28 PM bug #6049: Improve (area) filter handling for selection dialogs
Remembering the old filters works well even when changing the datasource or reopening the editor.
Not yet fully co...
Andreas Müller
03:54 PM bug #6057 (Closed): Name parser fails parsing author names with ` U+0060 GRAVE ACCENT
For example:
* Sedum plicatum O`Brian (FAILS)
* Sedum plicatum O'Brian (OK)
This important for the Algae Regis...
Andreas Kohlbecker
02:02 PM feature request #5616 (Feedback): Add the"Open in..." menu to taxon search
Works fine for pure names and taxon nodes.
For orphaned taxa it should not show allow the option "open in name edi...
Andreas Müller
01:45 PM bug #6056 (Closed): Checklist Editor does not close session
After closing the Checklist editor the session is still visible in the session view but shouldn't. Andreas Müller
01:01 PM feature request #6055 (New): Implement ordering for CdmViewer menu items
Patrick Plitzner
12:10 PM bug #6030 (Closed): Name parser support for genus hybrids
works fine Patrick Plitzner
11:23 AM task #6004 (Closed): Fix wiki page Roadmap
This looks good to me. the result looks very similar to what we had before and to have the status also available is a... Andreas Müller
08:28 AM bug #6038 (Rejected): [Redmine] NoScript detects CrossSiteScritping for Redmine
After playing around a little it seems like it the copied link only works if opened from within a Redmine issue. If c... Patrick Plitzner
07:14 AM bug #6045 (Closed): NPE when using TaxonNaturalComparator
Patrick Plitzner

09/05/2016

10:04 AM bug #6054 (Closed): classification breadcrumb navigation broken in IE and MS Edge
clicking the classification breadcrumb causes the children list to appear rotated by 90° in IE and MS Edge Andreas Kohlbecker
09:24 AM bug #6045: NPE when using TaxonNaturalComparator
please review, the sort order should depend on the sortindex of the taxonnode Katja Luther
08:57 AM bug #6053 (New): Improve web site security
Check EDIT Websites with https://observatory.mozilla.org/ and decide on actions that need to be taken
Sites to che...
Andreas Kohlbecker

09/02/2016

12:53 AM feature request #5616 (Resolved): Add the"Open in..." menu to taxon search
Andreas Müller
11:42 PM feature request #6041 (Feedback): Change the label of "Set as basionym of homotypical group"
I am not convinced yet that this is correct. Therefore I think we need to discuss this during the next user meeting. Andreas Müller
02:41 PM bug #6046 (Duplicate): Save button not enabled after factual data delete
Andreas Müller
02:11 PM bug #6052 (New): Implement Comparator for Type Designations
Currently the order of type designations is unordered. We should implement a comparator to have a fixed order.
Som...
Andreas Müller
01:21 PM bug #6032 (Feedback): Name parser support for hybrid ranks
>non-hybrids: "Berberis aggregata aggregata" with rank Variety is parsed as "Berberis aggregata var. aggregata"
As...
Andreas Müller
11:49 AM bug #6030 (Resolved): Name parser support for genus hybrids
Applied in changeset edit-svn|r28914. Andreas Müller
10:36 AM bug #6049: Improve (area) filter handling for selection dialogs
Check: what happens if datasource is changed Andreas Müller
09:29 AM bug #6049 (Resolved): Improve (area) filter handling for selection dialogs
Applied in changeset edit-svn|r28913. Patrick Plitzner
09:55 AM bug #6051 (New): Add toggle button for simple details view for names
to switch between simple and advanced view with just one click we need a toggle button like in media details view Katja Luther
09:53 AM feature request #6050 (Feedback): provide the possibility to choose the fields of the simple deta...
It should be possible to choose the displayed fields of the name details view in the preferences. Katja Luther

09/01/2016

05:02 PM bug #6049 (In Progress): Improve (area) filter handling for selection dialogs
Patrick Plitzner
01:42 PM bug #6049 (Closed): Improve (area) filter handling for selection dialogs
Hallo,
vermutlich finde ich nur die entsprechende Preferences Einstellung nicht.
Wenn ich in der Kuba Checklist...
Andreas Müller
11:48 AM bug #6046 (Duplicate): Save button not enabled after factual data delete
If factual data are deleted the save button is not enabled but should. Andreas Müller
07:34 AM bug #6045 (Resolved): NPE when using TaxonNaturalComparator
Applied in changeset edit-svn|r28904. Katja Luther

08/30/2016

04:11 PM bug #6045: NPE when using TaxonNaturalComparator
The NPE should be fixed with the attached revision. But I am not sure what the correct natural ordering of taxa looks... Patrick Plitzner
04:05 PM bug #6045 (Closed): NPE when using TaxonNaturalComparator
When sorting a taxon hierarchy like the following:
/*
* Classification
* * Abies
* `- ...
Patrick Plitzner

08/29/2016

11:09 AM bug #6038 (Feedback): [Redmine] NoScript detects CrossSiteScritping for Redmine
I think that this is a false positive xxs detection of NoScript.
Patric, please can you further investigate this i...
Andreas Kohlbecker
 

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