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From 07/07/2016 to 08/05/2016

08/04/2016

10:16 PM Revision 565df21b (cdmlib-apps): ref #6026 first basic import of types
Andreas Kohlbecker
02:30 PM Revision 53067226 (cdmlib): fix #6037 per batch transction commit implemented for excel imports
Andreas Kohlbecker
10:58 AM Revision 956da1e4 (taxeditor): fix #5953 Save open/close states of detail view sections for specific
data types Patrick Plitzner

08/03/2016

06:39 PM Revision ae5816a7 (taxeditor): Avoid double rendering of concept view
Patrick Plitzner
05:15 PM Revision 2d7d6704 (taxeditor): fix #5801 Make concept relations view work with taxon bulk editor
Patrick Plitzner
04:09 PM Revision 1a924f2f (cdmlib-apps): ref #6026 multiple improvements
- better ranks for incertis sedis and old Classes
- Caveats as annotations
Andreas Kohlbecker
03:31 PM Revision ae2183bb (taxeditor): fix #5853 Support relationships in referencing objects view
Patrick Plitzner
03:18 PM Revision 799bc964 (cdmlib-apps): #5448 Fix import of hybrid formula
Patrick Plitzner
02:20 PM Revision 4a61004b (cdmlib-apps): ref #5448 code cleanup
Patrick Plitzner
02:20 PM Revision 16c76ded (cdmlib-apps): #5448 Refactor hybrid name import/check
Patrick Plitzner
10:38 AM Revision d2a9d564 (cdmlib-apps): #5448 Use SEQNUM as id column
- enhance hybrid name check Patrick Plitzner
07:52 AM Revision e7ed2bb6 (cdmlib-apps): ref #6026 multiple improvements
- importing notes as annotations
- improved rank guessing
- solving performance problems related to classification ...
Andreas Kohlbecker

08/02/2016

11:45 AM Revision e8f97f69 (cdmlib-apps): #5448 Import genus hybrid formulas
Patrick Plitzner
10:21 AM Revision f261b330 (cdmlib-apps): ref #6026 multiple improvements
- better handling of fossil taxa
- Authors spelling as misspellings
- fix related to publication year
- "Author...
Andreas Kohlbecker

08/01/2016

08:56 PM Revision 3cbc3bec (taxeditor): #5751 Try to fix dependency copy in taxeditor.wepapp (IX)
Andreas Müller
08:52 PM Revision 411d6090 (taxeditor): #5751 Try to fix dependency copy in taxeditor.wepapp (VIII)
Andreas Müller
08:26 PM Revision 81c49785 (taxeditor): #5751 Try to fix dependency copy in taxeditor.wepapp (VII)
Andreas Müller
07:17 PM Revision ecdf2b45 (taxeditor): #5751 Try to fix dependency copy in taxeditor.wepapp (VI)
Andreas Müller
07:10 PM Revision 32c7e878 (taxeditor): #5751 Try to fix dependency copy in taxeditor.wepapp (V)
Andreas Müller
07:01 PM Revision 38556693 (taxeditor): #5751 Try to fix dependency copy in taxeditor.wepapp (IV)
Andreas Müller
06:27 PM Revision 7de68329 (taxeditor): #5751 Try to fix dependency copy in taxeditor.wepapp (III)
Andreas Müller
06:23 PM Revision dbd1c8d4 (taxeditor): #5751 Try to fix dependency copy in taxeditor.wepapp (II)
Andreas Müller
04:48 PM Revision 11cf8ce2 (taxeditor): #5751 Try to fix dependency copy in taxeditor.wepapp
Andreas Müller
04:30 PM Revision 4cebdf13 (cdmlib-apps): #6026 import of taxa and names working
Andreas Kohlbecker
04:24 PM Revision efc0b0fa (taxeditor): Remove duplicate dependency to cdmlib-model in taxeditor.cdmlib
Andreas Müller
04:13 PM Revision bff672e1 (cdmlib): #5751 remove version numbers from cdmlib-db and some cleanup
Andreas Müller
03:20 PM Revision 13a5f154 (cdmlib): #5751 finish redo r28780
* use cdmlib-test in persistence for 2 antrun plugin and hibernate3 plugin Andreas Müller
03:15 PM Revision 40d434ac (cdmlib): #5751 Partly redo r28780,
* remove com.mchange from cdmlib-remote-webapp test scope
* use cdmlib-db in persistence for 2 further plugins
Andreas Müller
02:51 PM Revision 16152631 (cdmlib-apps): #5448 Support corner cases
- SPI and KMB as ranks
- nomenclatural status type
- HYB name checking
Patrick Plitzner
02:51 PM Revision 602d7086 (cdmlib-apps): #5448 Handle rank "SPI"
Patrick Plitzner
02:51 PM Revision 3d438891 (cdmlib-apps): #5448 Import non-CDM ranks
Patrick Plitzner
02:51 PM Revision f91b0ef9 (cdmlib-apps): #5448 Remove non-exisiting hybrid category
Patrick Plitzner
02:51 PM Revision b939e4ff (cdmlib-apps): #5448 Import HYB 'nf'
Patrick Plitzner
02:51 PM Revision eac0d277 (cdmlib-apps): #5448 Import rank "SAM"
Patrick Plitzner
02:04 PM Revision b69a714e (cdmlib): #5751 further redo r28776, handle c3p0 via cdmlib-db in persistence
Andreas Müller
01:51 PM Revision 2b813c8a (cdmlib): #5751 further redo r28776, add cdmlib-db to persistence and remote-webapp
Andreas Müller
01:20 PM Revision c2566123 (cdmlib): #5751 Partly redo r28776, add c3p0 and mchange to cdmlib-db
* r28776 had been reverted due to problems, try to redo those parts that
do not create problems
Andreas Müller

07/29/2016

03:41 PM Revision c637ed1c (cdmlib): #5751 changing scope of cdmlib-db to compile for testing - this is maybe not really needed
Andreas Kohlbecker
03:38 PM Revision 796730a2 (cdmlib): #6023 trying to replace the maven-antrun plugin my the maven-aspectj plugin - does not work:
- compilation fails due to problems with generics Andreas Kohlbecker
03:36 PM Revision 2c4ee628 (cdmlib): #6023 adding missing dependency spring-context-support for antrun aspectj
Andreas Kohlbecker
03:32 PM Revision 71890f03 (cdmlib): #6023 fixing broken file location of spring-aspects for aspectj
Andreas Kohlbecker
03:26 PM Revision b6196547 (cdmlib): # #5751 mchange-commons-java needs to match the version as defined in the c3p0/pom.xml
- unsure if this is really needed but readded to better conform to pervious setup Andreas Kohlbecker
03:09 PM Revision 83d01838 (cdmlib): Upgrading maven-jetty-plugin to a version compatible to jdk 1.8
Andreas Kohlbecker
03:09 PM Revision 4a551354 (cdmlib): #5751 Further cleanup for cdmlib-db and poms
Andreas Müller
03:06 PM Revision d2968d5d (cdmlib): #3868 Add nothovar. test
Andreas Müller

07/28/2016

10:32 PM Revision ccc14670 (taxeditor): #5751 Remove c3p0 dependency
Andreas Müller
04:02 PM Revision 0515d9fc (cdmlib): #5751 Adaptions to cdmlib poms to replace explicit drivers by cdmlib-db
... Replace explicit DB drivers versioning from cdmlib-parent pom
Forgot to add in previous merge
Andreas Müller
03:50 PM Revision 1c56dd72 (taxeditor): #5751 Remove explicit dependencies to DB drivers by cdmlib-db in poms
Andreas Müller
03:33 PM Revision 9824b51b (cdm-server): #5751 Remove explicit dependencies to DB drivers by cdmlib-db in CDM
Server Andreas Müller
03:23 PM Revision 6b693bbc (cdmlib): #5751 Adaptions to cdmlib poms to replace explicit drivers by cdmlib-db
* Add c3po and mchange-commons-java to cdmlib-db
* Replace explicit DB drivers from cdmlib-persistence.pom by cdmlib...
Andreas Müller
12:55 PM Revision 7247a62e (cdmlib-apps): #6000 Use new CASUAL Method instead of deprecated INTRODUCED_ADVENTITIOUS
Andreas Müller
12:40 PM Revision 68c7d536 (cdmlib): #6000 fix missing default color
Andreas Müller

07/27/2016

05:46 PM Revision 145fc7c6 (cdmlib): #6000 Add static methods and uuids for new PAT terms
Andreas Müller
05:27 PM Revision 92ef0c45 (cdmlib-apps): Fixing strange dependency problem related to spring-orm version
Andreas Kohlbecker
05:13 PM Revision 5044803f (cdmlib): #6000 Add some new PresenceAbsenceTerms from Cyprus and Cuba
* Invasive changed to naturalized invasive (Cyprus, according to Pysek)
* naturalized invasive: presence questionab...
Andreas Müller
05:13 PM Revision 8bec79dd (cdmlib-apps): Initial set of classes for the IAPT import
Andreas Kohlbecker
05:09 PM Revision fd5fd2c8 (cdmlib): #6000 Use new CASUAL Method instead of derpeacted INTRODUCED_ADVENTITIOUS
Andreas Müller
01:38 PM Revision cb67ca59 (cdmlib): #6000 Unify some PresenceAbsenceTerms (merge naturalized, rename adventitious -> casual, etc)
Andreas Müller
10:50 AM Revision 90ec6419 (cdmlib-apps): removing build.xml
Andreas Kohlbecker
10:50 AM Revision 2b46bf5b (cdmlib-apps): gitignore
Andreas Kohlbecker
09:19 AM Revision 1e60fc7c (cdmlib-apps): #5448 Add "distinct" to SQL query as family table contains duplicate
rows Patrick Plitzner

07/26/2016

05:13 PM Revision 35b4c4a3 (cdmlib-apps): removing build.xml
Andreas Kohlbecker
05:12 PM Revision 8c25844f (cdmlib-apps): gitignore
Andreas Kohlbecker
05:09 PM Revision 19369d9b (cdmlib-apps): Fixing repository settings and project group id
Andreas Kohlbecker
05:09 PM Revision 6ab8444c (cdmlib-apps): Fixing repository settings and project group id
Andreas Kohlbecker
03:53 PM Revision e38554be (taxeditor): line endings
Patrick Plitzner
03:30 PM Revision 310262a2 (cdmlib-apps): #5488 Improve import of family taxa
- Load families in related object methods Patrick Plitzner
11:10 AM Revision e1d0ff38 (cdmlib-apps): #5448 Fix hybrid import where specific epithets are not from same genus
Patrick Plitzner
11:09 AM Revision 04d95229 (cdmlib-apps): #5448 Add family rank
Patrick Plitzner
09:09 AM Revision a02150f9 (cdmlib-apps): #5448 Fix hybrid import where specific epithets are not from same genus
Patrick Plitzner
09:01 AM Revision cc9d28ec (cdmlib-apps): #5448 Pass rank and nomenclatural code to name parser creation
Patrick Plitzner
08:11 AM Revision d4f17a57 (cdmlib-apps): #5448 Import hybrid with more than 2 parents with protected titlecache
Patrick Plitzner
08:07 AM Revision 70f3e481 (cdmlib-apps): #5448 Add missing ranks to transformer
Patrick Plitzner

07/25/2016

04:43 PM Revision 9e2583cf (cdmlib-apps): #5448 Enhance taxon name check
Patrick Plitzner
04:42 PM Revision e3cf774c (cdmlib-apps): #5448 Fix import of families
Patrick Plitzner
03:16 PM Revision 212e328c (taxeditor): missed to commit changes in search manager
Katja Luther
10:05 AM Revision 2f9b50b4 (cdmlib): Improve import report
Patrick Plitzner
09:02 AM Revision 51188df7 (taxeditor): add session to bulk editor
Katja Luther
07:31 AM Revision a8474132 (taxeditor): fix check active session
Katja Luther

07/21/2016

09:14 PM Revision 3fac85e9 (cdmlib): #5251 Fix Incorrect taxon source attachments
Patrick Plitzner

07/19/2016

09:13 PM Revision 94fbdc99 (taxeditor): fix specimenSearchWizard
Katja Luther
05:16 PM Revision cef0a41d (cdmlib): Improved import report
Patrick Plitzner
05:05 PM Revision 28177ef7 (taxeditor): Revert version number
Patrick Plitzner
04:08 PM Revision 87846336 (taxeditor): small changes to adapt to library changes
Katja Luther
03:54 PM Revision c7415eab (cdmlib): Saving files before refreshing line endings
Patrick Plitzner
03:50 PM Revision 7f271868 (cdmlib): set the tests to ignore until the dna import is fixed again
Katja Luther
03:46 PM Revision 2c774ade (cdmlib): fix merge problems
Katja Luther
03:26 PM Revision 2c12c2ca (cdmlib): fix merge problems
Katja Luther
03:24 PM Revision 6a9f4423 (cdmlib): fix merge problem
Katja Luther
03:18 PM Revision 12885b9d (cdmlib): minor
Katja Luther
03:18 PM Revision b55933d9 (cdmlib): minor
Katja Luther
03:18 PM Revision 4dbe02a5 (cdmlib): missing changes in test
Katja Luther
02:53 PM Revision b506f564 (cdmlib): Avoid double dot at end of field unit titlecache
Patrick Plitzner
02:53 PM Revision 2ab5e217 (cdmlib): Improve ABCD import report
Patrick Plitzner
02:52 PM Revision bbdee7be (cdmlib): missing changes in taxonDao
Katja Luther
02:38 PM Revision c40b793d (cdmlib): minor
Katja Luther
02:37 PM Revision a2e0f20a (cdmlib): minor
Katja Luther
02:16 PM Revision e8682dfa (cdmlib): delete the excluded taxa parameter for UuidAndTitleCache of classificationService
Katja Luther
02:16 PM Revision 9eb8d3fa (cdmlib): Revert "getUuidAndTitleCache of classificationservice does not need the excluded taxa"
This reverts commit 1b553592f0055e0fec1ab3878236fa0ecad1bd17. Katja Luther
02:16 PM Revision b0d023b8 (cdmlib): hamonization of specimen import
Katja Luther
02:16 PM Revision be647596 (cdmlib): first implementation for harmonization of import of specimen data
Katja Luther
02:15 PM Revision 3ca48534 (cdmlib): sortindex updater utilities
Katja Luther
02:15 PM Revision 5c01c676 (cdmlib): getUuidAndTitleCache of classificationservice does not need the excluded taxa
Katja Luther
01:51 PM Revision 780bbb51 (taxeditor): comment the changes out, to fix jenkins
Katja Luther
01:43 PM Revision aea91dac (taxeditor): Fix transient services
Patrick Plitzner
12:52 PM Revision 7f5e75e1 (taxeditor): Update taxeditor test modul version
Andreas Müller
12:52 PM Revision a47c12b2 (taxeditor): #5849 Show class name + uuid for newly created empty entities in bulk
editors Patrick Plitzner
12:52 PM Revision f4a3fecd (taxeditor): #5975 fixed title cache of empty specimens
Patrick Plitzner
12:49 PM Revision aef2fdc5 (taxeditor): revert the changes in ImportManager
Katja Luther
12:22 PM Revision df601566 (taxeditor): translate some commands
Katja Luther

07/18/2016

05:05 PM Revision c8c58de5 (cdmlib-apps): #5448 change DB table name
Patrick Plitzner
05:05 PM Revision ae538f84 (cdmlib-apps): #5448 Fix import of hybrids due to merge conflicts
Patrick Plitzner
05:04 PM Revision d5e984f6 (cdmlib-apps): #5448 Fix potential NPEs
Patrick Plitzner
03:41 PM Revision 592b01d0 (cdmlib): Allow whitespace after species epithet hybrid sign
Andreas Müller
02:54 PM Revision 652fec24 (cdmlib): #3868 Handle notho ranks correctly while formatting
Andreas Müller
01:52 PM Revision 1103732d (taxeditor): minor
Katja Luther
01:31 PM Revision 946091dd (taxeditor): missed to commit the LineBreakListener
Katja Luther
01:28 PM Revision dbbd527d (taxeditor): fix problem with wrong focus in name editor when editing name titlecache
Katja Luther
12:34 PM Revision a6b3a090 (cdmlib-apps): #5448 Import annotation infos
- hybrid formula
- ehrd, atlas, kart, flor, rl2015, wissk
Patrick Plitzner
10:44 AM Revision 6375d175 (cdmlib-apps): #5448 Fix title cache and LIE issues
Patrick Plitzner
10:44 AM Revision c0c4c356 (cdmlib-apps): #5448 Import cultivar as CultivarPlantName
Patrick Plitzner
10:40 AM Revision c98ea2df (cdmlib-apps): #5448 Add taxa to their respective families
Patrick Plitzner
10:40 AM Revision 308d3755 (cdmlib-apps): #5448 Import families
Patrick Plitzner
10:40 AM Revision 9e7339f0 (cdmlib-apps): #5448 javadoc
Patrick Plitzner
10:40 AM Revision 5e20e0f2 (cdmlib-apps): #5448 Fix possible NPE
Patrick Plitzner
10:40 AM Revision e138a102 (cdmlib-apps): #5448 Avoid clonig of all taxa for all classifications
Patrick Plitzner
10:40 AM Revision e85d547d (cdmlib-apps): #5448 Save concept relations
Patrick Plitzner
10:40 AM Revision a4854e75 (cdmlib-apps): #5448 typo
Patrick Plitzner
10:40 AM Revision 75733adf (cdmlib-apps): #5448 Set species epithet for species groups and aggregates
Patrick Plitzner
10:40 AM Revision 783428fc (cdmlib-apps): #5448 Move import of concept relationships to classification import
class
- there we already have the accepted taxa for the synonyms
Patrick Plitzner
10:12 AM Revision 8cb2c9bf (cdm-dataportal): upgrading selenium to 2.53.1
Andreas Kohlbecker
06:37 AM Revision 3c8d638c (cdmlib): Use title cache as fallback for specimen DTO for portal table
Patrick Plitzner

07/15/2016

01:33 PM Revision 310f2e0f (cdmlib): #5981 Add abbreviation to Rank "Cultivar"
Andreas Müller
01:18 PM Revision f0572620 (cdmlib): Use EN_DASH in E+M Condensed Distribution
Andreas Müller

07/14/2016

05:02 PM Revision 9a9a03a4 (cdmlib): #5778 implement first version for PAT symbols update
Andreas Müller
04:22 PM Revision 7c20414a (cdmlib): #5777 Replace dash type in PAT symbols
Andreas Müller
03:22 PM Revision e797826e (cdmlib): #5777 Fix symbol reading for PresenceAbsenceTerm csv
Andreas Müller
01:18 PM Revision a6adf906 (cdmlib): Add isInfraGenericButNotSpeciesGroup() method to Rank
Andreas Müller
12:02 PM Revision a3b2f701 (taxeditor): Empty concept view if an unsupported view is selected
Patrick Plitzner
08:59 AM Revision b4aea28a (cdmlib-apps): #5448 Set meaningful reference names
Patrick Plitzner
08:42 AM Revision 231d88bb (cdmlib-apps): Small additions to import
- import nomenclatural status extra information to ruleConsidered
- refresh title cache of taxa to correctly display...
Patrick Plitzner
08:40 AM Revision 17e07126 (taxeditor): Fix i18n properties
Patrick Plitzner

07/13/2016

12:28 PM Revision 7f861412 (taxeditor): Fix repository location for target platform
Patrick Plitzner
12:26 PM Revision 88d0b58a (cdmlib): Pass pageSize and pageNumber to list method
Patrick Plitzner

07/11/2016

05:06 PM Revision 58a29064 (cdmlib): #3925 First untested implementation for move excluded to TaxonNode
Andreas Müller
05:04 PM Revision 1e918bbc (cdmlib): #5976 First partial implementation for updateSortIndex
Andreas Müller
02:30 PM Revision 32e833cb (cdmlib): #4965 Implement general solution for getDatabase() in
WrappedCdmDataSource Andreas Müller
01:58 PM Revision cb53bcb3 (taxeditor): add selection of classification to csvPrintExport
Katja Luther
12:31 PM Revision 7c452fe9 (cdmlib): Merge branch 'develop' of ssh://dev.e-taxonomy.eu/var/git/cdmlib into develop
Katja Luther
12:31 PM Revision e6c333f3 (cdmlib): small changes in CsvNameExport
Katja Luther
10:54 AM Revision af1b3519 (cdmlib): It seems as if oclc number are no longer supported by the MobotOpenUrl api, test ignored
Andreas Kohlbecker
10:17 AM Revision 5e2ae553 (cdmlib): small change in CdvNameExport
Katja Luther

07/08/2016

08:36 PM Revision 2a562e3e (cdmlib): #5921 Change symbol for congruence relationship.
Andreas Müller
07:59 PM Revision 71757814 (cdmlib): #5826 Clean up names with empty name descriptions
Andreas Müller
06:05 PM Revision 46c571ad (cdmlib): #5875 Add isDefault flag to DescriptionBase
Andreas Müller
05:30 PM Revision f974bf29 (cdmlib): #5970 Add allowOverride
Andreas Müller
05:30 PM Revision 7cfc6254 (cdmlib): Add schema updater for v4.0-v4.1
Andreas Müller
05:25 PM Revision b4e979be (cdmlib): #5970 Add allowOverride and refactor CdmPreference
Andreas Müller
03:36 PM Revision d28e03d4 (cdm-dataportal): fix merge conflict
Patrick Plitzner
02:35 PM Revision 1396c2bc (cdmlib): #3958 Latest update to IPreferenceService classes
Andreas Müller
01:36 PM Revision b13fab25 (cdmlib): Add TaxonBase.secMicroReference to test dtd
Andreas Müller
12:57 PM Revision 6bb0a296 (cdmlib): Unignore MobotOpenUrlServices
Andreas Müller
12:49 PM Revision 581ecfc6 (cdmlib): Cleanup
Andreas Müller
09:51 AM Revision 0ac706e3 (taxeditor): fixing p2 repo urls for indigo releases and nebula
Andreas Kohlbecker
09:42 AM Revision b0629834 (taxeditor): remove accidentally comitted source information
Katja Luther

07/07/2016

04:55 PM Revision e7031ddb (taxeditor): Fix some typos in German translation
Andreas Müller
04:22 PM Revision e12efde6 (cdmlib): NameParser: allow letter for issue
Andreas Müller
04:07 PM Revision fd8908c4 (taxeditor): Add missing transient service method
Patrick Plitzner
02:57 PM Revision 548e618e (cdmlib): Add javadoc
Patrick Plitzner
02:46 PM Revision 73784421 (cdmlib): Merge branch 'develop' into csvExport
Patrick Plitzner
02:14 PM Revision f95ea870 (cdm-dataportal): Merge branch 'csvExport' into develop
Patrick Plitzner
02:09 PM Revision 176e260a (cdm-dataportal): Merge branch 'develop' into csvExport
# Conflicts:
# modules/cdm_dataportal/cdm_csv_export/cdm_csv_export.module
# modules/cdm_dataportal/cdm_dataportal.mo...
Patrick Plitzner
01:39 PM Revision 24f57e45 (cdm-dataportal): #5890 Fix auto-suggest for taxon search
- use classification uuids instead of root node uuids for taxontree
retrieval
Patrick Plitzner
01:36 PM Revision 3b2b4319 (cdmlib): #5890 pass classification uuid instead of root node uuid
Patrick Plitzner
01:03 PM Revision 1788e0c6 (cdmlib-apps): Adapt cdmlib-app poms to new version
Andreas Müller
 

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