Activity
From 06/26/2016 to 07/25/2016
07/25/2016
- 06:02 PM bug #6019 (Closed): Link to changeset does not work yet
- See http://dev.e-taxonomy.eu/redmine/issues/5420 which links to changeset r26712 in the comment from Cherian
- 05:03 PM task #6003: Cleanup redmine users
- Andreas Kohlbecker wrote:
> > * Maybe we should set Email notification for all locked users to "No events". I have d... - 04:56 PM task #6003: Cleanup redmine users
- Andreas Müller wrote:
> Open issues:
>
> * Are the following users required?
> * trac (id = 10; author of 114 w... - 04:28 PM task #6003 (Resolved): Cleanup redmine users
- Open issues:
* Are the following users required?
* trac (id = 10; author of 114 wiki_contents and wiki_content_v... - 04:15 PM task #6003: Cleanup redmine users
- I tested and updated all existing users with the following queries. Delete duplicates and set inactive users to locke...
- 09:51 AM task #6003 (Closed): Cleanup redmine users
- 1. find users which are associated with tickets as *onwer*, *assignee*, etc
`select distinct u.* from issues i jo... - 04:57 PM task #6006: setup automatic refresh of repositories in Redmine
- Andreas Kohlbecker wrote:
>
> done for:
>
> * edit svn with `/var/svn/edit/hooks/user-post-commit`
Seems lik... - 10:34 AM task #6006 (Closed): setup automatic refresh of repositories in Redmine
- This needs to be done for all repos in redmine:
http://www.redmine.org/projects/redmine/wiki/HowTo_setup_automat... - 03:17 PM feature request #6016 (Rejected): ICN rules in cdm validation framework implemented
- ICN rules specially relevant the for algae names are to be collected in ticket #6015
The resulting list of rule ar... - 01:36 PM bug #6007: Redmine: Wiki tables are not correctly mapped to new syntax
- Andreas Kohlbecker wrote:
> tables seem not (yet) to be supported [https://redmine.org/projects/redmine/wiki/Redmin... - 01:33 PM bug #6007: Redmine: Wiki tables are not correctly mapped to new syntax
- tables seem not (yet) to be supported [https://redmine.org/projects/redmine/wiki/RedmineTextFormattingMarkdown#Table...
- 01:21 PM bug #6007 (Worksforme): Redmine: Wiki tables are not correctly mapped to new syntax
- As an example see http://dev.e-taxonomy.eu/redmine/projects/edit/wiki/TCS
- 01:26 PM task #6008 (New): Fix broken UTF-8 characters
- Write a rake script to fix broken characters:
â€
pages with broken broken characters:
* http://dev.e-ta... - 10:14 AM task #6005 (Rejected): Create subprojects of EDIT platform components
- The issues related to platform components which have their own git repository should be managed in a separate subproj...
- 09:54 AM task #6004 (Closed): Fix wiki page Roadmap
- The trac query macros which have been used in trac need to be replaced by equivalent functionality in redemine:
Qu...
07/21/2016
- 02:31 PM feature request #5999 (Duplicate): Go directly to taxon page if only 1 result is returned for search
- WG: Kann man die (in diem Kontext) unnütze Zwischenseite überspringen, wenn nur ein Treffer da ist?
For lucene s...
07/20/2016
- 10:17 PM bug #5676: Sensu does not show up if no author exists for secundum reference
- Another example is "Elephantopus scaber" sensu FC-S & A&S which shows only "A&S" : http://portal.cybertaxonomy.org/f...
07/18/2016
- 04:36 PM feature request #5983: Better parsing of hybrid names
- Whitespace after species epithet hybrid sign implemented by r28704
- 04:34 PM feature request #5983 (Closed): Better parsing of hybrid names
- With the "new" rules from #3868 it is now easier to distinguish hybrids names and hybrid formulas.
E.g. Abies al... - 02:02 PM bug #5982 (Resolved): editing the protected titleCache set sometimes the focus to the name editor
- The problem was that the propertyChange listener causes a refresh of the name editor and for an empty string a method...
- 01:57 PM bug #5982 (Closed): editing the protected titleCache set sometimes the focus to the name editor
- sometimes editing the protected titleCache field yields to a focus change to the name editor text field. Therefore th...
07/15/2016
- 01:36 PM feature request #5981 (In Progress): Add abbreviation to Rank "Cultivar"
- Added abbreviation to csv file: r28685
- 01:32 PM feature request #5981 (Closed): Add abbreviation to Rank "Cultivar"
- For formatting it is helpful to have the abbreviation. Maybe not always necessary if name is handled as CultivarName,...
07/14/2016
- 05:04 PM feature request #5778 (Resolved): Update symbols for PresenceAbsenceTerms in existing databases
- First version implemented (untested) r28683
- 03:45 PM feature request #5778: Update symbols for PresenceAbsenceTerms in existing databases
- Differences are:
~~~
c3ee7048-15b7-4be1-b687-9ce9c1a669d6; endemic; e; ?
cef81d25-501c-48d8-bbea-542ec50de2c2; pres...
07/13/2016
- 01:38 PM feature request #5890 (Resolved): Implement auto-suggest for data portal
- 01:35 PM feature request #5890 (Feedback): Implement auto-suggest for data portal
07/12/2016
- 01:45 PM feature request #5890 (Closed): Implement auto-suggest for data portal
- Added a new ticket for weighted search results -> #5978
07/11/2016
- 05:30 PM feature request #5833 (Closed): Implement single cache strategy for references
- Seems to be fixed. However, we definetly still need to improve the cache strategy. But this is handled in separate ti...
- 05:07 PM bug #5976 (In Progress): Update sortIndex for potential nullValue sortIndexes
- 05:07 PM bug #5976: Update sortIndex for potential nullValue sortIndexes
- First partial and untested implementation with r28672. PKNode still missing.
- 04:43 PM bug #5976 (Closed): Update sortIndex for potential nullValue sortIndexes
- see #5955
Old data still needs to be updated. We already ran an updater but to be on the save side that really a... - 02:44 PM bug #5861 (Closed): Taxon appended phrase must not be in italics
- 02:44 PM bug #5861: Taxon appended phrase must not be in italics
- Looks good. I think we can close the ticket.
- 02:33 PM bug #4965 (Resolved): unsupported method getDatabase() in WrappedCdmDataSource breaks forceSchemaUpdate
- more general solution (for all supported database types) implemented by r28671
07/08/2016
- 09:07 PM feature request #5974 (Closed): Remove synonym relationships
- Synonym relationships are not necessarily needed as a synonym always belongs to 1 explicit taxon. They are only neede...
- 08:58 PM feature request #3925 (In Progress): Unplaced and excluded to TaxonNode
- 08:56 PM bug #5284 (In Progress): [UML] Replace Scope by DefinedTerm in PolytomousKey UML
- 08:52 PM feature request #5258 (In Progress): Accessed field for WebPages
- 08:46 PM feature request #5523 (In Progress): [DISCUSS] Do we need to distinguish homotypic and heterotypic synonym relationships
- 08:45 PM feature request #5634 (In Progress): Excluded note for excluded taxa /taxon nodes
- 08:42 PM feature request #5778 (In Progress): Update symbols for PresenceAbsenceTerms in existing databases
- 08:37 PM feature request #5921 (Resolved): Change symbol for congruence relationship.
- Fixed by r28665
- 05:37 PM feature request #5921 (In Progress): Change symbol for congruence relationship.
- 08:02 PM bug #5826: Clean up names with empty name descriptions
- Some SQL statements for testing
~~~
SELECT db.id, dba.DTYPE, dba.feature_id, db.created
FROM DescriptionBase db IN... - 08:00 PM bug #5826 (Resolved): Clean up names with empty name descriptions
- Fixed by r28664
- 05:37 PM bug #5826 (In Progress): Clean up names with empty name descriptions
- 06:19 PM feature request #5875 (Resolved): Add isDefault flag to DescriptionBase
- 06:19 PM feature request #5875: Add isDefault flag to DescriptionBase
- Fixed by r28663
- 05:38 PM feature request #5875 (In Progress): Add isDefault flag to DescriptionBase
- 06:18 PM feature request #5973 (Closed): Implement DescriptionBase.isDefault in TaxEditor
- With cdm 4.1 we do have the DescriptionBase.isDefault flag.
In the Editor we should evaluate this flag by
* m... - 05:34 PM feature request #5970 (Resolved): Implement allowOverride in CdmPreference
- 05:22 PM feature request #5970: Implement allowOverride in CdmPreference
- fixed by [28661] and [28659]
- 02:48 PM feature request #5970 (In Progress): Implement allowOverride in CdmPreference
- 02:48 PM feature request #5970 (Closed): Implement allowOverride in CdmPreference
- if false, the preference should not be overridden by local preferences
if true local preferences override databa... - 04:30 PM feature request #5972 (Closed): Prevent user from unwanted author and reference updates
- From time to time it happens that users press the "edit" button for editing authors or references.
This is usual... - 02:53 PM feature request #5971 (Closed): Implement database wide CdmPreference writing
- Similar to TaxEditor preferences CDM Preferences need to be inserted/updated.
In the new "Admin" main menu we ne... - 02:37 PM feature request #5969 (Closed): Implement CdmPreference reading for database preferences
- Start with NomenclaturalCode. The values are available through IPreferenceService.
See also #3958, #5971
- 01:10 PM bug #5967 (Closed): Adapt default update site to production update site.
- Adapt default update site to http://cybertaxonomy.eu/download/taxeditor/update/stable/. Currently it is http://cybert...
- 10:21 AM bug #5965 (Worksforme): Check if authentication works correctly after datasource change
- Hallo,
bei Caryophyllales_spp gibt’s folgende Meldung (Rubiaceae_Mex) funktioniert.
Herzlichen Gruß
Walter
...
07/07/2016
- 01:45 PM bug #5964 (New): It is not possible to search for hybrid formulas in taxon search
- I tested this with Festuca × Lolium
see also #5832 (same ticket for TaxEditor)
07/06/2016
- 03:26 PM feature request #5833 (Resolved): Implement single cache strategy for references
- 11:24 AM bug #5191 (Worksforme): TransmissionEngineDistribution stops before it is 100% done
- seems to be fixed by one the latest changes (most probably aadb17f) :
* 9b7db8d TransmissionEngineDistribution: sol...
07/05/2016
- 04:06 PM feature request #5956 (Closed): Improve functionality and UX for (children display in) breadcrumb navigation - 2
- successor of #5852
1) remove transparency (needs to be discussed if needed): moved to #6312
2) mobile devic... - 04:00 PM bug #5861: Taxon appended phrase must not be in italics
- Replying to [[comment3|a.mueller]]:
> Unfortunately this is not yet fixed. I tested with http://test.e-taxonomy.eu/d... - 01:45 PM feature request #5947: Type information for same field unit should be handled in one line
- "Or even better with abbreviate type status (e.g. HT instead of Holotype). "
Type status should not be abbreviated. ... - 10:02 AM feature request #5947 (New): Type information for same field unit should be handled in one line
- Currently each type designation has one line, but shouldn't if both types have the same field unit.
Example: htt... - 11:47 AM feature request #5952 (Closed): Second cache field for specimen (identityCache)
- for more information see #5951
- 11:46 AM feature request #5951 (New): Add collector, field number and collection to specimen search label
- Currently the specimen search uses the specimen titleCache as search string. In the titleCache the collector, field n...
- 11:29 AM feature request #5950 (Duplicate): Add duplicate method for type designations
- Often users want to enter type designation data for a taxon name for multiple types (e.g. holotype and some isotypes)...
- 10:28 AM bug #5948 (Closed): supress protologue icon if according media uri is missing
- http://api.cybertaxonomy.org/rubiaceae_mexico/portal/name/ea5142cd-8c09-4b0b-b57a-8a1e2c869be0/taxonNameDescriptions....
07/04/2016
- 03:06 PM bug #5945 (Closed): Deduplicate results from termloading by class
- 03:06 PM bug #5945: Deduplicate results from termloading by class
- Work around seems to work in TaxEditor
07/01/2016
- 12:53 PM bug #5945 (Resolved): Deduplicate results from termloading by class
- 12:53 PM bug #5945: Deduplicate results from termloading by class
- Fixed by r28535 / commit:f7a01923
- 12:46 PM bug #5945 (Closed): Deduplicate results from termloading by class
- The general problem is described in #5871
This ticket is a workaround until the general problem has been solved
... - 11:41 AM task #5943 (Closed): back to search button/link should go into a drupal block
- The `admin/config/cdm_dataportal/settings/layout/taxon` offers the option:
~~~
[x] Show Back to search results ... - 11:14 AM feature request #5942 (New): Advanced Search filter to exlude Distributions with status absent
- A filter option should be added to the Advanced Search exclude Distributions with status absent. This should be part ...
06/30/2016
- 01:09 PM feature request #5936: Multilanguage Support for TextData
- Hallo,
mir fällt gerade auf, dass das Problem bei Espanol sein könnte, dass diese Sprache eigentlich nur über den C... - 12:38 PM feature request #5936 (New): Multilanguage Support for TextData
- It seems that TextData has no multi-language support yet in Dataportal.
Hallo,
die Eingabe von 2 Sprachve... - 01:08 PM bug #5938 (Closed): distribution and specimen maps can not be used on the same page
In tab-less taxon pages with distribution and georeferenced specimens the specimen map is broken.
test cases:...
06/29/2016
- 06:29 PM feature request #5935 (New): use double line to separate concept relations from homotypic groups
- _Synonymie ... darunter mit Doppelstrich abgesetzt Konzeptsynonyme, nicht eingerückt. _
Examples:
* ...?
A... - 04:05 PM feature request #5177 (Closed): improve perfomance of TransmissionEngineDistribution
- local branch TransmissionEngine-speedup rebased on develop
- 04:01 PM feature request #4366 (Resolved): Transmissionengine Distribution: implement rules for source references
- implemented:
* f5295f3 [r28519 Transmissionengine aggregation of source references|* 92a6aa3 r28518] aggregation of... - 09:40 AM bug #5926: Update labels in TermEditor for Vocabularies
- This is even the case after closing and opening the term editor.
- 09:37 AM bug #5926 (Closed): Update labels in TermEditor for Vocabularies
- If the label of a vocabulary is changed in term editor details view it is not updated in the term editor window.
...
06/28/2016
- 05:55 PM feature request #4366: Transmissionengine Distribution: implement rules for source references
- Replying to [[comment1|a.kohlbecker]]:
> Hallo Andreas,
>
> dem letzten Satz kann ich zustimmen: " es wäre in di... - 04:19 PM bug #5861: Taxon appended phrase must not be in italics
- Unfortunately this is not yet fixed. I tested with http://test.e-taxonomy.eu/dataportal/preview/flora-cuba/cdm_datapo...
- 10:52 AM feature request #5736: Show sec reference for TaxonInteractions
- Works fine. Only remaining issue if possible: also add links like DOIs and URIs if available.
Example: http://test...
06/27/2016
- 05:26 PM bug #4821: Changing order of terms not possible
- The term still disappears if I try to move it. Reappears at old possition after reconnect.
What I did:
* created ... - 05:04 PM bug #5924 (Closed): Change password leads to bad credentials
- Changing the password currently does not login with new password and leads to a bad credentials exception.
There... - 02:24 PM feature request #5922 (Closed): Change order in supplemental data view
- Rights and Credits are almost never used. Therefore we should move them to the end of the list. Otherwise one often n...
- 01:49 PM feature request #5921: Change symbol for congruence relationship.
- Hallo,
> Und das Zeichen beim Konzeptsynonym irritiert mich – sichere Kongruenz sollte doch das Gleichheitszeichen ... - 01:15 PM feature request #5921 (Closed): Change symbol for congruence relationship.
- Und das Zeichen beim Konzeptsynonym irritiert mich – sichere Kongruenz sollte doch das Gleichheitszeichen mit einem D...
- 01:00 PM bug #5710: Changing the database connection must reset all caches
- In Mexico Rubiaceae I observered that I added NamedAreaLevel und Type to existing areas but they resulted in wrong ID...
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