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From 04/24/2016 to 05/23/2016

05/23/2016

07:41 PM Revision f3f4d328 (cdmlib-apps): Refactor names and taxa creation #5448
Patrick Plitzner
07:17 PM Revision d72d4db9 (cdmlib-apps): Add 8 more classifications #5448
Patrick Plitzner
05:53 PM Revision 48cd39f3 (cdmlib-apps): improve taxon name check #5448
- add new string constants Patrick Plitzner
05:39 PM Revision 64efeeb7 (cdmlib): Add preferred stable URI to Derived Unit Facade #5765
Andreas Müller
04:31 PM Revision c9ec6fc8 (cdmlib-apps): Set trinomial hybrids #5448
- improve taxon name check Patrick Plitzner
04:25 PM Revision b2a2e465 (cdmlib): Add secundum micro reference to cache strategy #5767
Andreas Müller
03:47 PM Revision 1726e8f0 (cdmlib-apps): Avoid duplicate UUIDs by fixing the order of adding original sources
#5448 Patrick Plitzner
03:44 PM feature request #5795: [DISCUSS] Do we need comb. ined. as a nomenclatural status?
Hallo Norbert,
ich sehe gerade, dass du in http://dev.e-taxonomy.eu/trac/ticket/3046#comment:4 eigentlich Combinati...
Andreas Müller
03:44 PM feature request #5795: [DISCUSS] Do we need comb. ined. as a nomenclatural status?
Hallo,
ich habe nichts dagegen – nur das die Liste der Abkürzungen länger wird. Kann man da eigentlich die Reihenfo...
Andreas Müller
02:53 PM Revision c43ce745 (taxeditor): revert the last commit of this file
Katja Luther
02:10 PM Revision 589a5c0f (taxeditor): Fix session disposal #5694
Patrick Plitzner
01:21 PM Revision 251eb633 (taxeditor): revert the last commit of this file
Katja Luther
12:54 PM bug #5823 (In Progress): Fehler beim parallel Editieren von Referenzen
split of #5694
More general ticket can be found here: #5980
Hallo, hier noch ein solcher Fall, aber diesmal...
Andreas Müller

05/22/2016

10:24 AM Revision 8f6337ac (cdmlib-apps): Handle hybrid names (only binomial at the moment)
Patrick Plitzner
10:23 AM Revision 268abe46 (cdmlib-apps): Fix typo
Patrick Plitzner

05/21/2016

10:12 AM feature request #5815: Reverse label for features
implemented by [r28019|[28022:28024]]
Remaining issue: indexing, currently commented as it creates LIEs while index...
Andreas Müller
01:44 AM Revision aeed5cfb (cdmlib): Add jaxb annotation for reverse representation #5815
Andreas Müller
01:27 AM Revision 42521ec5 (cdmlib): Remove indexing from reverse feature representation #5815
Andreas Müller
12:50 AM Revision 1e88ae89 (cdmlib): Define column name for feature inverse representation #5815
Andreas Müller
12:42 AM Revision 0fac705a (cdmlib): Move factory methods up (Feature)
Andreas Müller
12:41 AM Revision 70545d28 (cdmlib): Move static constants to top (Feature)
Andreas Müller

05/20/2016

01:17 PM Revision 23b11e25 (cdmlib): Add inverse representation to feature #5815
Andreas Müller
01:09 PM feature request #5817 (Closed): Rename RelationshipTermBase_inverseRepresentation
... to TermBase_inverseRepresentation as this is also used by Feature.
Also rename column relationshipTermBase_id ...
Andreas Müller
11:26 AM Revision 60bb7bf5 (taxeditor): fix #5816
Katja Luther
11:14 AM Revision fc441479 (cdmlib): Add getter/setter for secMicroReference #5717
Andreas Müller
11:14 AM Revision cebe86ae (cdmlib): remove sortFieldOptions (old lucene)
Andreas Müller
11:08 AM feature request #5815 (In Progress): Reverse label for features
Features that support TaxonInteraction or IndividualsAssociation (but maybe also CommonNames, Distributions and Quant... Andreas Müller

05/18/2016

03:13 PM Revision f586dcf5 (cdmlib-apps): Fix ClassCastException and ordering #5452
Patrick Plitzner
02:56 PM Revision 6ad13c4b (cdmlib-apps): Refactor constants
Patrick Plitzner
12:41 PM Revision dd244f30 (taxeditor): fix for #5638
Katja Luther
09:31 AM Revision 0b2466d9 (cdmlib-apps): Ordering of XML elements and some refactoring #5452
Patrick Plitzner

05/17/2016

03:29 PM Revision c35d72cd (taxeditor): add symbol to DefinedTerm details view
Katja Luther
02:51 PM Revision bf692139 (cdmlib): fix delete of polytomous keys
Katja Luther
02:49 PM Revision f30ec5df (taxeditor): fixing the deletion of polytomous keys
Katja Luther
01:06 PM Revision 2387a634 (taxeditor): add PolytomousKeyService to CdmStore.getService and EditFromSelectionWizard
Katja Luther
09:35 AM Revision 8c54ac7b (taxeditor): More i18n for #5758
Patrick Plitzner

05/13/2016

04:15 PM feature request #5807 (New): implement sub-distribution area inclusion in TaxonService.findTaxaAndNamesByFullText()

for example: 'Campanula alliariifolia' is not found when using the area `Caucasia (Ab + Ar + Gg + Rf(CS)) (Cc)` it...
Andreas Kohlbecker

05/12/2016

01:25 PM bug #5800 (Closed): Remove "Taxonomically Included In" from list of concept relationship types
... in concept relationship view.
Taxonomically Included In is deprecated and will be removed in future.
Andreas Müller
01:15 PM Revision 2d6c9835 (taxeditor): Typo
Andreas Müller
11:34 AM feature request #5697: Show name conserved against as [non xxx]
Also in the new user interface for choosing name relationships a hint is missing that these will be shown as "non xxx... Andreas Müller
11:27 AM feature request #5697: Show name conserved against as [non xxx]
The status is still missing in the portal, though it exists in the data: http://api.cybertaxonomy.org/flora_cuba/port... Andreas Müller

05/11/2016

10:04 PM Revision 6032f3bc (cdmlib): Move other invalid names to the end #5794
Andreas Müller
09:53 PM feature request #5795 (Closed): [DISCUSS] Do we need comb. ined. as a nomenclatural status?
In #3046 (and #5794) it is suggested to handle comb. ined. as an invalid status. Currently we do not have comb. ined.... Andreas Müller
09:49 PM bug #3046 (Closed): Sort order for taxa with status not being nom.inval. is incorrect
Open issues for other invalid status (provisional, comb. inval., comb. ined. and opp. utique oppr.) split to ticket #... Andreas Müller
09:47 PM feature request #5794 (Closed): Move other invalid names to the end
Split from #3046
In #3046 only nom. inval. and nom. nud. were put to the end with nom. nude. comes after nom. in...
Andreas Müller
07:43 PM bug #5676: Sensu does not show up if no author exists for secundum reference
As mentioned in Cuba Checklist: http://portal.cybertaxonomy.org/flora-cuba/cdm_dataportal/taxon/a42ea47d-09df-4b94-af... Andreas Müller
05:56 PM bug #5676: Sensu does not show up if no author exists for secundum reference
where did you test this? Can you give an example uri?
Andreas Kohlbecker
05:46 PM bug #5676: Sensu does not show up if no author exists for secundum reference
Still does not work. Shows only "Cyperus unifolius" but should show "Cyperus unifolius" sec. Fabaceae.xlsx (added th... Andreas Müller
05:53 PM Revision 60f8f830 (cdmlib-apps): Export concept realtion type #5452
Patrick Plitzner
05:53 PM Revision 9a62ab6a (cdmlib-apps): Adjust import/export path #5452
Patrick Plitzner
05:53 PM Revision 33ba11bd (cdmlib-apps): Refactored conceptCode map and TaxonRelation map #5452
Patrick Plitzner
05:52 PM Revision 232898fb (taxeditor): i18n for #5758
Patrick Plitzner
05:41 PM feature request #5647: Aggregate misapplied names with multiple sensu references
Also on http://portal.cybertaxonomy.org/flora-cuba/cdm_dataportal/taxon/6bbb3f75-ac3c-40f8-b91d-01069d5173c9 the sec... Andreas Müller
05:33 PM feature request #5647: Aggregate misapplied names with multiple sensu references
Replying to [[comment3|a.mueller]]:
> Hi Andreas,
>
> hier ein Beispiel für die dopptele sensu Anzeige: ...
So...
Andreas Müller
05:28 PM Revision d45bc597 (taxeditor): Remove "Close Connection" and changed "Connect" to "Create Data Model"
#5758 Patrick Plitzner
03:00 PM Revision 48879be4 (cdmlib-apps): Update BgbmInstancesUpdater
Andreas Müller
11:43 AM Revision b0cbdb10 (taxeditor): Adapt CdmServerInfo to always include cybertaxonomy.org (production) #5769
Andreas Müller
11:43 AM Revision d1fcc397 (taxeditor): Preliminary adapt CDM model cacher script to work for cached model update
Andreas Müller
10:52 AM Revision 4ed5c440 (cdmlib-apps): Export concept relationships
Patrick Plitzner
10:52 AM Revision e6c321b7 (cdmlib-apps): Change imported classification name
Patrick Plitzner

05/10/2016

06:09 PM Revision fb87cdf0 (cdmlib-apps): Remove unused generic and logger
Patrick Plitzner
06:04 PM Revision 4a31998d (cdmlib-apps): Export taxNr
Patrick Plitzner
04:35 PM Revision a7ed8d4b (cdmlib-apps): Fix export of TextData
Patrick Plitzner
04:34 PM Revision 56946f39 (cdmlib-apps): Use ISO date
Patrick Plitzner
04:34 PM Revision da891ec9 (cdmlib-apps): Import taxNr as identifier of taxon
Patrick Plitzner
02:49 PM feature request #5783 (Closed): Rename demo instances back to demo I and demo II
Currently they are called edit-WS I and edit-WS II which is not really intuitive and the demo instances are not only ... Andreas Müller
01:45 PM Revision c40d7820 (cdmlib-apps): Remove supporsCategoricalData flag for TextData features
Patrick Plitzner
12:41 PM Revision db305a52 (taxeditor): Add support for PersistentBag #5781
Patrick Plitzner
12:21 PM Revision d2ca0a1c (cdmlib-apps): Export synonymy and TextData
- some refactoring Patrick Plitzner
12:21 PM Revision 5dbdbb23 (cdmlib-apps): Set root element attributes
Patrick Plitzner
11:40 AM Revision 1130e566 (cdm-vaadin): setting correct cdmlib.version which was messed up during the release process
Andreas Kohlbecker
10:39 AM Revision 100665f3 (cdm-vaadin): fixing cdmlib version which was wronly set in the cdm-vaadin-RLS-FINISH job
Andreas Kohlbecker
10:39 AM Revision 8ebefd6a (cdmlib): Fix possible class cast exception for collections of features #5780
Patrick Plitzner

05/09/2016

05:45 PM Revision 6930747c (cdmlib-apps): Export features ("Eigenschaften")
Patrick Plitzner
05:44 PM Revision 3262d093 (cdmlib-apps): Refactored term import
Patrick Plitzner
04:23 PM feature request #5682: Implement condensed distribution string for Cuba
see also #5777, #5779, #5734
Andreas Müller
04:22 PM feature request #5779 (Closed): Update EuroPlusMedCondensedDistributionComposer to use new symbol field
Split from #5734
See also #5777, ...
Andreas Müller
04:18 PM feature request #5778 (Closed): Update symbols for PresenceAbsenceTerms in existing databases
see #5777
Andreas Müller
04:15 PM Revision e80f8337 (cdmlib): Update symbols for PresenceAbsenceTerms in csv files #5777
Andreas Müller
03:20 PM Revision 022a02a1 (cdmlib): Remove hierachy information from PresenceAbsenceTerm csv as it will not
be used. Andreas Müller
02:58 PM Revision d848e175 (cdmlib): minor
Andreas Müller
11:04 AM Revision 20624f5a (cdm-dataportal): advanced search hints on using the asterisk
Andreas Kohlbecker
10:52 AM Revision 9c6eb818 (cdm-dataportal): #4979 avoiding the deployment of jar artefacts for the dataportal module
Andreas Kohlbecker
10:43 AM Revision cac1390b (cdmlib): Add first version of cdmlib-db #5751
Andreas Müller
10:35 AM bug #5775 (Closed): Advanced Search AreaFilter: areas tree incomplete
In the cichorieae portal the tree of areas is incomplete.
The data portal obviously fetches the complete set of ar...
Andreas Kohlbecker
10:16 AM bug #5191: TransmissionEngineDistribution stops before it is 100% done
updating transmission engine request
Andreas Kohlbecker
09:50 AM Revision 15a0854d (cdm-server): Upgrade CDM Server compiler plugin to java 1.7
Andreas Müller

05/06/2016

11:32 PM bug #5773 (Duplicate): Exceptions during CDM Server startup are not caught correclty
Andreas Kohlbecker
05:49 PM bug #5773 (Duplicate): Exceptions during CDM Server startup are not caught correclty
Currently if an error appears during startup of CDM Server (e.g. during term loading) this is not necessarily indicat... Andreas Müller
10:41 PM bug #5774 (Closed): cdmserver misses to detect some errors in failed instances
The following error was missed, the cdmserver kept on reporting that the instance is 'started' even if it completely ... Andreas Kohlbecker
01:54 PM Revision a5f35c6f (cdmlib): Change serial version id for identifiable entity and other minor issues
Andreas Müller
01:09 PM feature request #5662 (Closed): New nomenclatural status nom. cons. des.
This ticket is generally fixed. Automated update works.
Only general issue is that term.titleCache is now filled wi...
Andreas Müller

05/05/2016

01:01 AM feature request #5606 (Closed): Add preferred stable URI to SpecimenOrObservation
fixed
Andreas Müller

05/04/2016

06:00 PM Revision 465a998e (taxeditor): Merge branch 'develop' into LibrAlign
Patrick Plitzner
05:58 PM Revision ff9af820 (cdmlib-apps): Sort exported taxon list
Patrick Plitzner
05:46 PM Revision f6102301 (cdmlib-apps): Export common name
Patrick Plitzner
05:29 PM Revision c09ef0ad (cdmlib-apps): Export epithet, rank and scientific name
Patrick Plitzner
11:45 AM Revision 30387e2b (cdmlib-apps): Add logging
Patrick Plitzner
11:44 AM Revision 072b4d45 (cdmlib-apps): Export taxonym "bereich"
Patrick Plitzner
11:04 AM Revision 70d09a58 (cdmlib-apps): Import taxa
Patrick Plitzner
10:33 AM Revision c09572ee (cdmlib-apps): minor
Patrick Plitzner

05/03/2016

07:27 PM Revision 4010865d (cdmlib): Fix empty protected titlecaches #5763
Andreas Müller
07:27 PM Revision b5e1bdbb (cdmlib): Adapt reusability of Credits / Rights
Andreas Müller
07:27 PM Revision 341c08ea (cdmlib): Adapt clone method for credits and rights to be consistent with JPA
mapping (not reusable). Andreas Müller
06:00 PM Revision 627b371b (cdm-dataportal): #4979 fixing location of artifact to be uploaded
Andreas Kohlbecker
05:53 PM Revision d059f83c (cdm-dataportal): Merge branch 'release/4.0.0' into develop
jenkins
05:53 PM Revision b034b8b0 (cdm-dataportal): updating poms for branch'release/4.0.0' with non-snapshot versions
jenkins
05:53 PM Revision 2c5d86f1 (cdm-dataportal): release-preparation: production level css
jenkins
05:51 PM Revision 90b8f8dc (cdm-dataportal): release-preparation: production level css
jenkins
05:50 PM Revision a283892e (cdm-dataportal): #4979 better commit before you push ;-)
Andreas Kohlbecker
05:45 PM Revision 10478240 (cdm-dataportal): #4979 git bug fix
Andreas Kohlbecker
05:39 PM Revision 66cea767 (cdm-dataportal): #4979 removing unnecessary remains of old version from script
Andreas Kohlbecker
05:35 PM Revision 6333aec9 (cdm-dataportal): updating poms for 4.1.0-SNAPSHOT development
jenkins
05:35 PM Revision 7c5661e2 (cdm-dataportal): updating poms for 4.0.0 branch with snapshot versions
jenkins
05:00 PM Revision 03e53b89 (cdm-dataportal): #4979 delpoy.sh script adapted and splitted
Andreas Kohlbecker
04:47 PM Revision 8fb2f8c2 (cdm-dataportal): #4979 setting merge=ours in gitattributes to avoid merge conflicts in gitflow
Andreas Kohlbecker
03:57 PM Revision bcb6df2c (cdm-dataportal): fist adaptions - incomplete
Andreas Kohlbecker
03:38 PM Revision fe36abb4 (cdm-server): Merge branch 'release/4.0.0' into develop
jenkins
03:37 PM Revision 3f6a11fd (cdm-server): updating poms for branch'release/4.0.0' with non-snapshot versions
jenkins
03:37 PM Revision f4b9d5f6 (cdm-server): setting source encoding and plugin version
Andreas Kohlbecker
03:17 PM Revision d84be7c3 (cdm-server): adding merge strategy for gitflow releases
Andreas Kohlbecker
03:14 PM Revision 5f9a4d04 (cdmlib-apps): Write export to XML file
Patrick Plitzner
02:27 PM Revision 32363554 (cdm-webapp): jenkins merging release branch into master (strategy: theirs)
jenkins
02:27 PM Revision a3b92baf (cdm-webapp): Merge branch 'release/4.0.0' into develop
jenkins
02:27 PM Revision e9986cf3 (cdm-webapp): updating poms for branch'release/4.0.0' with non-snapshot versions
jenkins
02:27 PM Revision 186dcde0 (cdm-webapp): jenkins bumping cdmlib.version and cdm.vaadin.version to 4.0.0
jenkins
01:58 PM Revision b597979d (cdm-webapp): updating poms for branch'release/4.0.0' with non-snapshot versions
jenkins
01:58 PM Revision 978cd51d (cdm-webapp): jenkins bumping cdmlib.version and cdm.vaadin.version to 4.0.0
jenkins
01:58 PM Revision ef644917 (taxeditor): Merge branch 'release/4.0.0' into develop
jenkins
01:58 PM Revision 4b30e08b (taxeditor): Merge branch 'release/4.0.0'
jenkins
01:57 PM Revision 8f1bd7fc (cdm-vaadin): Updating develop poms back to pre merge state
jenkins
01:57 PM Revision 67363206 (cdm-vaadin): Merge branch 'master' into develop
jenkins
01:57 PM Revision fbcabd08 (cdm-vaadin): updating develop poms to master versions to avoid merge conflicts
jenkins
01:57 PM Revision 9d197128 (cdm-vaadin): Merge branch 'release/4.0.0'
jenkins
01:54 PM Revision 86eca46c (cdm-vaadin): updating poms for branch'release/4.0.0' with non-snapshot versions
jenkins
01:54 PM Revision ea0f28da (cdmlib): Updating develop poms back to pre merge state
jenkins
01:54 PM Revision 953decc1 (cdmlib): Merge branch 'master' into develop
jenkins
01:54 PM Revision 5a97be23 (cdmlib): updating develop poms to master versions to avoid merge conflicts
jenkins
01:54 PM Revision e21daba9 (cdmlib): Merge branch 'release/4.0.0'
jenkins
01:35 PM Revision c4db95cb (cdmlib): updating poms for branch'release/4.0.0' with non-snapshot versions
jenkins
01:19 PM task #5757 (New): move taxeditor configuration file into ~/.cdmLibrary/taxeditor/
1. move ~/.cdmLibrary/cdm_remote_servers.json to ~/.cdmLibrary/taxeditor/cdm_remote_servers.json
2. consider t...
Andreas Kohlbecker
12:55 PM Revision a282c5d8 (cdmlib): Cleanup MediaRepresentationPart and PolytomousKeyNode #5756
Andreas Müller
12:51 PM Revision 573e41ed (cdmlib-apps): Initial import of BfnXmlExport #5452
Patrick Plitzner
12:50 PM Revision 1196e86d (cdmlib-apps): Revert missing rank constant
Patrick Plitzner
10:14 AM Revision 84852ea5 (cdmlib-apps): Fix logger instantiation
Patrick Plitzner
10:11 AM Revision 58da7e98 (cdmlib-apps): Refactored string constants
Patrick Plitzner
10:11 AM Revision 0584658e (cdmlib-apps): Structure package architecture for BfnXml Im-/Export
Patrick Plitzner

05/02/2016

10:56 PM Revision 21241357 (cdmlib): Fix failing test for DescriptionUtility
Andreas Müller
10:24 PM Revision 8b74112c (cdmlib): Remove cascading to terms #5755
Andreas Müller
10:23 PM Revision af45e069 (cdmlib): minor
Andreas Müller
09:30 PM Revision 77eb660c (cdmlib): Add orphanRemoval to RelationshipTermBase.inverseRepresentation
Same exists for TermBase.representation so we have consistent behavior
now. Also it makes sense as inverse Representa...
Andreas Müller
09:09 PM Revision c53e35a3 (cdmlib): Remove cascade from term to vocabulary #5754
Andreas Müller
08:52 PM Revision a8cc3ea8 (cdmlib-apps): Update cdmlib-apps version to 4.1
Andreas Müller
08:49 PM Revision 4df8da90 (cdmlib-apps): minor
Andreas Müller
08:48 PM Revision 99a87dea (cdmlib-apps): update test model in appimport
Andreas Müller
05:41 PM bug #5492: Doubtful synonyms and misapplied names to be displayed correctly
is #5753 already implemented for this ticket?
Andreas Müller
05:24 PM bug #3276: NPE for "Move Elements" context menu option
Is this still an open issue?
Andreas Müller
05:21 PM bug #2592: InvalidDataAccessApiUsageException when saving description scope
Is this still an open issue?
Andreas Müller
04:19 PM feature request #5752 (Closed): Reduce TaxEditor size
There are many places where the Editor code needs to be cleaned up in terms of real dependencies and code which links... Andreas Müller
03:19 PM feature request #4716 (Resolved): Other dependencies to be updated
Andreas Müller
03:16 PM Revision 93b05693 (cdm-webapp): jenkins bumping cdmlib.version and cdm.vaadin.version to 4.0.0-SNAPSHOT
jenkins
03:16 PM Revision fcb51503 (cdm-webapp): updating poms for 4.1.0-SNAPSHOT development
jenkins
03:16 PM Revision 7f18f16c (cdm-webapp): jenkins bumping cdmlib.version and cdm.vaadin.version to 4.1.0-SNAPSHOT
jenkins
03:14 PM Revision 62611fe9 (taxeditor): Updated version in pom / project files to taxeditor version : 4.1.0-SNAPSHOT and cdmlib version : 4.1.0-SNAPSHOT
jenkins
03:14 PM Revision b8dc1f1a (taxeditor): Updated version in pom / project files to taxeditor version : 4.0.0 and cdmlib version : 4.0.0
jenkins
02:20 PM Revision 2eb93744 (cdm-vaadin): jenkins bumping cdmlib.version to 4.0.0-SNAPSHOT
jenkins
02:20 PM Revision 69ec9364 (cdm-server): updating poms for 4.1.0-SNAPSHOT development
jenkins
02:20 PM Revision a9230500 (cdm-vaadin): updating poms for 4.1.0-SNAPSHOT development
jenkins
02:20 PM Revision 6d4bccc5 (cdm-vaadin): jenkins bumping cdmlib.version to 4.1.0-SNAPSHOT
jenkins
02:18 PM Revision 685583c7 (cdmlib): updating poms for 4.1.0-SNAPSHOT development
jenkins
02:05 PM Revision 31cdbbe4 (cdm-dataportal): fixing order by for term web service request
Andreas Kohlbecker
01:30 PM bug #5286 (Resolved): seemingly duplicate distributions
The task of reviewing this ticket encompasses for now only the problems and ideas described in #4411#note-10 to #441... Andreas Kohlbecker
01:28 PM bug #5286 (Feedback): seemingly duplicate distributions
reopening this ticket in favour of splitting the ticket #4411 in two
Andreas Kohlbecker
11:47 AM Revision e0bf8077 (cdm-dataportal): #5737 adapting test
Andreas Kohlbecker
10:14 AM Revision 542732a4 (cdmlib): Model Updater for other H2 test databases
Andreas Müller
10:14 AM Revision 7abafd61 (cdmlib): Update Cuba Condensed String handling
Andreas Müller

04/29/2016

08:43 PM Revision 05406cda (taxeditor): Classpath in molecular.lib updated.
Ben Stöver
08:40 PM Revision 3b957453 (taxeditor): Test case for SequenceIDIterator added.
Ben Stöver
08:23 PM Revision b4979250 (taxeditor): Context menu entry for exporting alignment files added.
ExportSingleReadAlignmentHandler renamed to ExportSequenceToFileHandler. Ben Stöver
08:09 PM Revision 76e5c721 (taxeditor): Exported packages of molecular plugin updated.
Basic export functionality for direct export of consensus sequence alignments implemented (untested). Ben Stöver
07:02 PM Revision 6b35e189 (taxeditor): Exports of plugin molecular.lib updated.
Minor changes. Ben Stöver
03:52 PM Revision 3bb8d914 (taxeditor): Update cached CDM
Andreas Müller

04/28/2016

09:27 PM Revision f1c8dbb2 (taxeditor): Update Editor tests to 4.0
Andreas Müller
09:11 PM Revision 74b39e26 (taxeditor): Update Editor tests to 4.0
Andreas Müller
08:52 PM Revision 8504f4f3 (taxeditor): Update TaxEditor H2 test database to 4.0
Andreas Müller
08:42 PM Revision 68e1e979 (cdm-vaadin): Vaadin H2 test database updated
Andreas Müller
04:44 PM Revision 7d194cca (taxeditor): Cleanup transient agent service
Andreas Müller
04:43 PM Revision e8633778 (taxeditor): Remove sourced object form referencing objects view #5743, #5746
Andreas Müller
04:17 PM Revision 82386baf (cdmlib): Add removed factory method for identifiers #5743
Andreas Müller
03:47 PM Revision 6080ece2 (cdmlib): Update test H2 after model update to 4.0
Andreas Müller
03:47 PM Revision 28291ec8 (cdmlib): Remove method agentsUsedAsUsers related to #5743
Andreas Müller
03:47 PM Revision 8165133b (cdmlib): minor
Andreas Müller
03:47 PM Revision 03851443 (cdmlib): Add getter/setter for preferredStableIdentifier #5606
Andreas Müller
03:47 PM Revision d0b0c36b (cdmlib): Add getter/setter/termloader for (inverse)symbol, fix update script
#5734 Andreas Müller
03:47 PM Revision 6554f51e (cdmlib): Fix revisionnumber update for PostgreSQL #5718
Andreas Müller
03:47 PM Revision ff140a94 (cdmlib): Remove not null constraint from revisionnumber schema updater #5718
We need a contraint adder later. Andreas Müller
03:47 PM Revision 1efda338 (cdmlib): minor
Andreas Müller
03:47 PM Revision 0ecfd682 (cdmlib): Remove bidirectionality for supplemental data #5743
Andreas Müller
03:47 PM Revision a5e64d94 (cdmlib): cleanup
Andreas Müller
03:47 PM Revision 8674da7a (cdmlib): Clean up Credit
Andreas Müller
03:47 PM Revision 44637850 (cdmlib): Add test for bidirectional supplemental data #5743
Andreas Müller
03:47 PM Revision 10f66752 (cdmlib): Add SaveOrUpdate to PKNode.otherNode
Andreas Müller
03:47 PM Revision b46b4c40 (cdmlib): Clean up AnnotationDao and AnnotationService
Andreas Müller
03:47 PM Revision 47e005aa (cdmlib): Increase length of symbol and inverseSymbol #5734
Andreas Müller
03:47 PM Revision 1089f0e4 (cdmlib): Update test data for xxxObj_type #3701
Andreas Müller
03:47 PM Revision dc5c692a (cdmlib): Change reverseSymbol to inverseSymbol #5734
Andreas Müller
03:47 PM Revision 32acf672 (cdmlib): Adapt AnnotationDaoTest #3701
Andreas Müller
03:47 PM Revision 9a222951 (cdmlib): Shorten metaValues for @AnyMetaDef CdmBase #3701
Andreas Müller
03:47 PM Revision 27390ea6 (cdmlib): Update script for upading xxxObj_type #3701
Andreas Müller
03:47 PM Revision 8af17f4b (cdmlib): javadoc
Andreas Müller
03:47 PM Revision 43c15ff9 (cdmlib): Add TypeDesignations to @AnyMetaData #3701
Andreas Müller
03:47 PM Revision 54d047ac (cdmlib): Clean up DescriptionElementSource.java
Andreas Müller
03:47 PM Revision 2610e050 (cdmlib): Clean up IdentifiableSource java file
Andreas Müller
03:47 PM Revision 8a52bc4f (cdmlib): Add missing @AnyMetaDef metaValues #3701
Andreas Müller
03:47 PM Revision 73b20217 (cdmlib): Add symbol and reverseSymbol do DefinedTermBase #5734
Andreas Müller
03:47 PM Revision ef1b5da2 (cdmlib): Adapt table and column names to hibernate 5 naming strategy #5369
... and some other changes to table/attribute names Andreas Müller
03:47 PM Revision 3cc81789 (cdmlib): Remove Autoincrement on AuditEvent.revisionnumber on MySQL #5718
* Not yet tested for H2 and PostGreSQL Andreas Müller
03:47 PM Revision f9c81f74 (cdmlib): Fix Jaxb for SpecimenOrObservationBase #5606
Andreas Müller
03:47 PM Revision fc55b5a5 (cdmlib): Add secundum micro reference to TaxonBase #5717
Andreas Müller
03:47 PM Revision b1d1518e (cdmlib): Add secMicroReference #5717
Andreas Müller
03:47 PM Revision 25ab030b (cdmlib): Add preferred stable URI to SpecimenOrObservation #5606
Andreas Müller
03:47 PM Revision 7c4720b9 (cdmlib): Add base structure for model update to 4.0
Andreas Müller
03:28 PM Revision 8837697c (cdmlib): Fix sort order for nom illeg with date #3338
Andreas Müller
03:28 PM Revision cdea462f (cdmlib): Unignore IPNI Service
Andreas Müller
03:28 PM Revision b59db821 (cdmlib): Include nom. illeg. in homotypic group ordering #3338
Andreas Müller
03:28 PM Revision 54bd5b12 (cdmlib): small changes for moving taxonnodes
Katja Luther
03:28 PM Revision 542dad13 (cdmlib): Rename TaxonNodeDao to TaxonNodeDto
Andreas Müller
03:28 PM Revision 5689e6dc (cdmlib): harmonizing OrderHintPresets
Andreas Kohlbecker
03:28 PM Revision 8fa5e245 (cdmlib): removing unused old swagger-ui files
Andreas Kohlbecker
03:28 PM Revision 24e42456 (cdmlib): #5730 base url detection fixed
Andreas Kohlbecker
03:28 PM Revision 6a5d5c24 (cdmlib): #5482 web services now support different orderBy modes
Andreas Kohlbecker
03:28 PM Revision 6ee99e1e (cdmlib): revert a small change in taxonservice
Katja Luther
03:28 PM Revision 0e1aa80c (cdmlib): improve delete configurator for taxa and synonyms
Katja Luther
03:25 PM Revision 3c5b6451 (cdmlib): Update test H2 after model update to 4.0
Andreas Müller
03:18 PM Revision d29ee3ff (cdmlib): Remove method agentsUsedAsUsers related to #5743
Andreas Müller
03:15 PM Revision aff8866e (cdmlib): minor
Andreas Müller
02:55 PM Revision 5ab7454f (cdmlib): Add getter/setter for preferredStableIdentifier #5606
Andreas Müller
02:40 PM Revision a523b3b1 (cdmlib): Add getter/setter/termloader for (inverse)symbol, fix update script
#5734 Andreas Müller
01:41 PM Revision 8f952b7f (cdmlib): Fix revisionnumber update for PostgreSQL #5718
Andreas Müller
11:57 AM Revision 7c891856 (cdmlib): Remove not null constraint from revisionnumber schema updater #5718
We need a contraint adder later. Andreas Müller
11:25 AM Revision b64debfc (taxeditor): Merge trunk into branch
Patrick Plitzner
10:53 AM Revision e1c93e76 (cdmlib): minor
Andreas Müller
10:37 AM Revision 43d3e0c8 (taxeditor): Fix dependencies and model update
Patrick Plitzner
10:07 AM Revision 2ef4f2a4 (taxeditor): Move command added to POM of molecular.lib plugin.
Minor changes. Ben Stöver
12:07 AM Revision 52c34f45 (cdmlib): Remove bidirectionality for supplemental data #5743
Andreas Müller

04/27/2016

11:29 PM Revision 2c39a5a3 (cdmlib): cleanup
Andreas Müller
12:32 PM Revision da658207 (cdmlib): Clean up Credit
Andreas Müller
12:12 PM feature request #5647: Aggregate misapplied names with multiple sensu references
fixed: 6bb442f r27811 avoiding duplicate sensu at missapplications
Andreas Kohlbecker
12:09 PM Revision c6a0721d (cdmlib): Preliminary changes for FK problem on sourcedObj_id using common base
class #5534, later reverted due to #5743 Andreas Müller
12:03 PM Revision ed77d49a (cdmlib): Add SourceableEntity #5534
Andreas Müller
11:59 AM Revision 1ba5d960 (taxeditor): Fix enabling/disabling of referencing obejcts table #5603
Patrick Plitzner
11:38 AM Revision 0d472556 (taxeditor): Fix dependencies and model update
Patrick Plitzner
11:14 AM Revision de663d24 (taxeditor): i18n for derivate view context menu #5406
Patrick Plitzner
08:05 AM Revision 22606492 (taxeditor): Add suppport for User and Group to ReferencingObjectsView #5603
- disable viewer table when no selection available Patrick Plitzner

04/26/2016

10:49 PM Revision 0e8eea19 (cdmlib): Fix sort order for nom illeg with date #3338
Andreas Müller
10:04 PM Revision a1525050 (cdmlib): Add test for bidirectional supplemental data #5743
Andreas Müller
10:01 PM Revision bd8f3b78 (cdmlib): Add SaveOrUpdate to PKNode.otherNode
Andreas Müller
07:39 PM Revision bf7d1e0b (cdmlib): Clean up AnnotationDao and AnnotationService
Andreas Müller
10:33 AM Revision be50704c (cdmlib): Increase length of symbol and inverseSymbol #5734
Andreas Müller
01:17 AM Revision 19d3fa64 (cdmlib): Update test data for xxxObj_type #3701
Andreas Müller
12:46 AM Revision 94087974 (cdmlib): Change reverseSymbol to inverseSymbol #5734
Andreas Müller
12:44 AM Revision a629f807 (cdmlib): Adapt AnnotationDaoTest #3701
Andreas Müller

04/25/2016

10:57 PM Revision 16e36077 (cdmlib): Shorten metaValues for @AnyMetaDef CdmBase #3701
Andreas Müller
10:51 PM Revision 1fb24db4 (cdmlib): Update script for upading xxxObj_type #3701
Andreas Müller
10:50 PM Revision b7a8cd19 (cdmlib): javadoc
Andreas Müller
10:29 PM Revision db0ba517 (cdmlib): Add TypeDesignations to @AnyMetaData #3701
Andreas Müller
04:06 PM Revision 664e623c (cdmlib): Clean up DescriptionElementSource.java
Andreas Müller
04:05 PM Revision c2db095e (cdmlib): Clean up IdentifiableSource java file
Andreas Müller
04:03 PM Revision fa136b2f (cdmlib): Add missing @AnyMetaDef metaValues #3701
Andreas Müller

04/24/2016

05:19 PM Revision 72f7a5eb (taxeditor): JPhyloIO dependencies added to molecular.lib.
Ben Stöver
03:07 PM Revision 0f94eb75 (taxeditor): Typo correction.
Ben Stöver
 

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