Activity
From 11/28/2015 to 12/27/2015
12/22/2015
- 02:32 PM Revision cd26eb20 (cdmlib): fixing problems regarding lucene search after merge - one test still failing
- 01:23 PM bug #5048: cdm-server causes unusual high native memory consumption for jvm
- latest examination shows that a significant about memory which is allocated for the cdm-server process seems to be us...
12/21/2015
- 05:04 PM Revision 54db8d0c (cdmlib): updating version of new maven module
- 05:04 PM Revision be3836ef (cdmlib): solving last merge problem
- 04:50 PM Revision f8edbccb (cdmlib): resolving conflicts after merge of ticket_4716 into develop
- 03:16 PM Revision 58788d66 (cdm-webapp): manually setting cdmlib version
- 03:10 PM Revision 16fa1b8f (cdm-webapp): jenkins merging release branch into master (strategy: theirs)
- 03:10 PM Revision 485311cb (cdm-webapp): Merge branch 'release/3.12.0' into develop
- 03:10 PM Revision 5c4f4a51 (cdm-webapp): updating poms for branch'release/3.12.0' with non-snapshot versions
- 03:05 PM Revision aa33a91d (cdm-server): Merge branch 'release/3.12.0'
- 03:05 PM Revision 96de7862 (cdm-server): Updating develop poms back to pre merge state
- 03:05 PM Revision c73c2c0d (cdm-server): Merge branch 'master' into develop
- 03:05 PM Revision 834993c1 (cdm-server): updating develop poms to master versions to avoid merge conflicts
- 03:04 PM Revision 642d5aee (cdm-server): updating poms for branch'release/3.12.0' with non-snapshot versions
- 01:39 PM Revision bda4b174 (cdm-webapp): gitignore
- 01:36 PM Revision 1280e70b (cdm-webapp): adding .gitattributes with special merge strategy for git flow see #4897
- 11:39 AM Revision c52ad2f1 (cdm-webapp): jenkins bumping cdmlib.remote.webapp.version and cdm.vaadin.version to 3.12.0
- 11:30 AM Revision a432ab06 (taxeditor): Merge branch 'release/3.12.0'
- 11:29 AM Revision 8447bbdb (cdm-vaadin): Updating develop poms back to pre merge state
- 11:29 AM Revision a4d32015 (cdm-vaadin): Merge branch 'master' into develop
- 11:29 AM Revision 49281124 (cdm-vaadin): updating develop poms to master versions to avoid merge conflicts
- 11:29 AM Revision 351e2384 (cdm-vaadin): Merge branch 'release/3.12.0'
- 11:29 AM Revision 8883008e (cdmlib): Latest changes for Markup Transformer
- 11:27 AM Revision 9bc849d2 (cdm-vaadin): updating poms for branch'release/3.12.0' with non-snapshot versions
- 11:27 AM Revision 72376479 (cdmlib): Updating develop poms back to pre merge state
- 11:27 AM Revision 05071a15 (cdmlib): Merge branch 'master' into develop
- 11:27 AM Revision 5f691b4b (cdmlib): updating develop poms to master versions to avoid merge conflicts
- 11:27 AM Revision 0702cb87 (cdmlib): Merge branch 'release/3.12.0'
- 11:13 AM Revision 21cfcb56 (cdmlib): updating poms for branch'release/3.12.0' with non-snapshot versions
12/19/2015
12/18/2015
- 09:55 PM Revision 2b5f8b56 (cdmlib-apps): Add first version of Edaphobase importer and some clean up
- 05:30 PM Revision 28fa9f2c (cdmlib): Add PostGreSQL to Source class and clean up PostgreSQL DatabaseType
- 04:07 PM Revision b2c5e60c (cdmlib): Add features for FM vol8
- 02:42 PM Revision e9f6b22c (taxeditor): Removed production server from ServerInfo and added test server for
- developping
- 01:45 PM Revision 82c0097a (cdm-webapp): jenkins bumping cdmlib.remote.webapp.version and cdm.vaadin.version to 3.12.0-SNAPSHOT
- 01:45 PM Revision 12c2a117 (cdm-webapp): updating poms for 3.13.0-SNAPSHOT development
- 01:45 PM Revision c2960ab3 (cdm-webapp): jenkins bumping cdmlib.remote.webapp.version and cdm.vaadin.version to 3.13.0-SNAPSHOT
- 01:29 PM Revision 0e9fc7a2 (taxeditor): Updated version in pom / project files to taxeditor version : 3.13.0-SNAPSHOT and cdmlib version : 3.13.0-SNAPSHOT
- 01:29 PM Revision 58fc5f05 (taxeditor): Updated version in pom / project files to taxeditor version : 3.12.0 and cdmlib version : 3.12.0
- 12:30 PM feature request #4770 (Resolved): Allow convert person to team
- Is this fixed?
- 12:30 PM feature request #4769 (Resolved): Allow convert team to person
- Is this fixed?
- 12:05 PM bug #5440 (New): Make maps show up with volatile areas and fix tests for EditGeoService
- This ticket is split from #5357
Also cleanup tests in EditoGeoServiceTest which has a couple of tests that shoul... - 11:48 AM Revision 5b4b6e2a (cdm-vaadin): jenkins bumping cdmlib.version to 3.12.0-SNAPSHOT
- 11:48 AM Revision 13faefa4 (cdm-vaadin): updating poms for 3.13.0-SNAPSHOT development
- 11:48 AM Revision fbe86723 (cdm-vaadin): jenkins bumping cdmlib.version to 3.13.0-SNAPSHOT
- 11:48 AM Revision 9d979f8c (cdm-server): updating poms for 3.13.0-SNAPSHOT development
- 11:46 AM Revision bbaf945a (cdmlib): updating poms for 3.13.0-SNAPSHOT development
- 11:12 AM Revision c704fcae (cdmlib): Fix TransientObjectException for distribution map #5357
- Test do not yet work fully and are commented
- 11:05 AM Revision 1de9921a (taxeditor): Adapt editor to cdmlib API changes
12/17/2015
- 03:07 PM Revision db557ba1 (cdmlib): reverting failed attempt to fix maven resources filtering for windows
- 02:04 PM Revision 54d41b9c (cdmlib): Revert remote-webapp changes partly to test what the error is
- 01:40 PM Revision 10f53a0f (cdmlib): avoiding NPEs in pager
- 01:25 PM Revision e21f448a (cdmlib): try to fix remote-webapp test
- 12:28 PM Revision a1439def (cdmlib): Cleanup description generics (related to #5357)
- 12:28 PM Revision f0624ff1 (cdmlib): Change remote-webapp pom to work under windows
- 12:28 PM Revision db28183a (cdmlib): Some minor markup routine updates
- 11:28 AM Revision ba14cf76 (taxeditor): add production server to server info
12/16/2015
- 10:38 AM Revision 0f5ddf4b (cdmlib): Increase Gbif webservice version number #4571
- 09:07 AM Revision e9a08395 (taxeditor): Reset status bar message for initial opening
12/15/2015
- 05:16 PM Revision 1f3c62f9 (cdm-dataportal): #5023 adding otopo1 via edit proxy to the list of available layers
- 04:01 PM Revision 8e89b1f9 (cdm-dataportal): #5023 adding vmap0 via edit proxy to the list of available layers
- 01:24 PM Revision 15977465 (cdmlib-apps): Update FloraMalesiana sources and Transformer
- 12:50 PM Revision 490f620f (cdmlib): minor
- 12:28 PM Revision cde36383 (cdmlib): revert the commit of the renamed deletelistener
- 12:25 PM Revision d1cf4a26 (cdmlib): add null check for delete and minor
- 12:07 PM Revision 97e31233 (cdmlib): minor for #5391
- 09:35 AM Revision 3c30907f (taxeditor): Add condition to handler for referencing objects view to bulk editor
- plugin.xml
- 08:37 AM Revision eb7bdd58 (taxeditor): Remove "edit" commands which are replaced by generic cdmViewer framework
- 08:30 AM Revision 3ccdb99b (taxeditor): Add generic cdmViewer extension context menu to bulk editor
- - add handler for opening referencing objects view
- 08:29 AM Revision c5a29684 (taxeditor): Fix possible NPE
- 08:16 AM Revision d6258880 (taxeditor): Filter out disabled commands
- 08:15 AM Revision b98207ca (taxeditor): Add command for opening referencing view with no default handler
12/14/2015
- 06:36 PM Revision 098e0027 (taxeditor): Extract abstract super class for default open handlers
- 06:18 PM Revision 420c234a (taxeditor): Add generic default command for opening taxon editor for taxa and taxon
- nodes
- 04:50 PM Revision 9251f8a3 (taxeditor): Revert changes for JRE feature
- 12:49 PM Revision 0431817d (taxeditor): Disable root file for Linux64
- 12:48 PM Revision 936f6ad8 (taxeditor): Fix feature name
- 11:30 AM Revision f8e86f1a (taxeditor): Set environment parameters for JRE feature inclusion
- 10:56 AM Revision 3c9d88e6 (cdmlib): #5397 exclusion of paths in swagger config fixed
- 10:36 AM Revision d22ed2f6 (taxeditor): Include JRE feature
- 10:32 AM Revision 3cd45512 (cdmlib): #5397 swagger-ui web application working, layout fixed
12/12/2015
12/11/2015
- 05:11 PM Revision 4dff09dc (cdmlib): #5397 replacing swagger-ui by springfox-swagger-ui
- 04:43 PM Revision e6a83c5b (cdmlib): #5397 replacing swagger-springmvc by springfox-swagger2
- 03:12 PM Revision 68419ba1 (cdmlib): #5397 fixing mapping problems in Description* controllers
- 12:51 PM Revision faf45262 (cdmlib-apps): Add Edaphobase activator
- 11:38 AM Revision ae444f99 (cdmlib): organizing imports
- 11:35 AM Revision d41d0a9d (cdmlib): #5397 creating separate controller for DescriptionElemens: avoids need for CdmAntPathMather and thus simplifies the Spring configuration
- 11:31 AM Revision f71f37e3 (cdmlib): organizing imports
- 11:27 AM Revision b1c5e27c (cdmlib): organizing imports
12/10/2015
- 05:21 PM Revision 8b6fd32a (taxeditor): Remove jre linux64 feature from feature
- 04:56 PM Revision a761b3ee (taxeditor): Enable root folders
- 04:46 PM Revision fa0777dc (taxeditor): Add target folder to .gitignore
- 04:31 PM Revision 33acd6f3 (taxeditor): add test file
- 04:25 PM Revision 35939fd1 (taxeditor): Add linux64 feature to editor feature
- 04:21 PM Revision c2707662 (taxeditor): Fix version number
- 04:16 PM Revision a5e7bf99 (taxeditor): Disabled root files for JRE bundling
- 04:10 PM Revision 16edc408 (taxeditor): add jre linux64 feature to parent pom
- 04:08 PM Revision d46a003b (taxeditor): Initial import of linux64 JRE feature
- 04:04 PM Revision 9fd4be89 (taxeditor): Re-add build.properties.with.jre
- 03:39 PM Revision 450636e9 (taxeditor): Remove JRE feature
- 10:52 AM Revision 4a70e77a (taxeditor): Merge branch 'develop' of https://dev.e-taxonomy.eu/git/taxeditor into develop
- 10:51 AM Revision 4a077484 (taxeditor): add deleted seperator to get back the menu item TaxonNavigator
- 10:13 AM Revision 3dfd2e65 (taxeditor): Revert changes done for JRE feature
- 08:42 AM Revision b4e7b7b0 (taxeditor): Removed unused uuid parameter for opening DerivateEditor
- 08:39 AM Revision 124382f7 (taxeditor): Applied generic framework for opening objects to classifications in
- taxon navigator
12/09/2015
- 06:31 PM Revision 250453cf (taxeditor): Generalize extension point for opening object in taxeditor
- 05:22 PM Revision c70a7f0f (cdmlib): #4716 reduicing clutter in the lucene index and solving performance problems which probably fixes #4277 and #3663
- 04:40 PM Revision b24e806d (cdm-dataportal): removing intendation of bibliography content
- 04:34 PM Revision 4c3bc9b3 (taxeditor): Fix parent pom version number
- 04:32 PM Revision 4c50bd29 (taxeditor): Add pom.xml to new jre feature
- 04:28 PM Revision 846d38f0 (taxeditor): Add new project to parent pom
- - Removed "qualifier" from jre project
- 04:24 PM Revision 2866216e (taxeditor): Set qualifier to jre feature
- 04:16 PM Revision ab8154dd (taxeditor): Set version number of jre feature
- 04:03 PM Revision a703c6e9 (taxeditor): Bundle JRE in new feature
- 03:57 PM Revision 5da4ac56 (taxeditor): Initial import of jre feature
- 02:30 PM bug #5430 (In Progress): P2 update of Taxonomic Editor bundled with JRE does not work
- 12:42 PM Revision 72682d6e (taxeditor): fix #4940
- 12:31 PM Revision 28cefe56 (cdmlib-apps): minor
- 12:27 PM Revision 50818ab7 (cdmlib-apps): adapt the import classes to the new return type ImportResult
- 11:19 AM Revision 05048d47 (taxeditor): Merge branch 'develop' of https://dev.e-taxonomy.eu/git/taxeditor into develop
- 11:17 AM Revision 4bdefadf (taxeditor): fix #5221
- 10:50 AM Revision 599261fd (taxeditor): Add scope restrictions to PolytomousKey details view #5280
- 08:59 AM Revision 1d716a84 (taxeditor): Generalize term service method listByTermType()
- 08:59 AM Revision 740b2830 (cdmlib): Generalize term service method listByTermType()
12/08/2015
- 06:37 PM Revision ec8e146e (taxeditor): Remove colon from EntitySelectionElement label #5265
- 05:08 PM task #5244 (Closed): [DISCUSS] How should specimens be created and edited?
- This is fixed with the implementation of the unified derivative editor
- 10:36 AM Revision e214b66c (taxeditor): Set all meta data to null/zero when uri is not resolvable #5312
- 08:05 AM Revision 530a7656 (taxeditor): Add status bar info for hierarchies found
12/07/2015
- 06:19 PM Revision 95f14149 (taxeditor): Set image meta data in simple media view
- 06:03 PM Revision a0af0095 (taxeditor): Move getService to CdmStore
- 04:56 PM Revision 70baf07a (taxeditor): Add type specimen icon
- 04:19 PM Revision b9c5a9df (taxeditor): Refactored image loading
- - fix some NPEs
- 03:25 PM Revision 98886159 (taxeditor): Add type specimen icon to derivate editor
- 03:25 PM Revision 0fc5c09c (taxeditor): Fix possible NPE
- 02:31 PM Revision 9e56f862 (taxeditor): Merge branch 'develop' of ssh://dev.e-taxonomy.eu/var/git/taxeditor into develop
- 02:30 PM Revision 78839371 (taxeditor): Avoid persisting data when hitting cancel in EditFromSelectionWizard
- #2645
- create new entitySession for every wizard
- merge for OK, dispose for Cancel - 02:23 PM Revision 7bc3c044 (taxeditor): Remove AuthorHelper which used to automatically convert Persons to Teams
- 01:31 PM Revision 4f31577f (cdmlib): #4761 performance improvent of massindexer by using new hibernate 5 massindexer, speedup by 3x
- 01:31 PM Revision 3adfa9a9 (cdmlib): #4761 performance improvent of massindexer by using new hibernate 5 massindexer, speedup by 3x
- 09:40 AM Revision 8d35d957 (cdmlib): #4761 removing @Indexed from abstract base classes since hibernate now fully supports polymorph class hierarchies
12/04/2015
- 06:01 PM Revision 46829a91 (cdmlib): #4761 avoiding deprecations in highlighter api
- 06:01 PM Revision 96d3c40f (cdmlib): #4761 updating means to obtain the IndexManager to new hibernate search api and extending according test
- 06:01 PM Revision 1d2c42b2 (cdmlib): #4761 TopDocs adapting to removed IndexSearcher.setDefaultFieldSortScoring(boolean, boolean) method
- 06:01 PM Revision 57ea8a3a (cdmlib): #4761 TopDocs now supports maxScore, so TopGroupsWithMaxScore has become obsolete
- 06:01 PM Revision 1432e66e (cdmlib): #4761 removing @Field annotation from CdmBase.id which has become obsolete
- 06:00 PM Revision c9aa51a1 (cdmlib): #4761 correcting usage of new paramaters joinQuery parameters ScoreMode and multipleValuesPerDocument
- 05:59 PM Revision a636f1e2 (cdmlib): adding note with link to the cdmlib-remote-webapp configuration and bootstrapping wiki page
- 05:59 PM Revision 00bea758 (cdmlib): #4761 fixing broken area filter join query, by circumventing a bug in lucene LUCENE-4824 (numeric fields not supported in join queries)
- 04:38 PM Revision 997a1522 (cdmlib-apps): Update cdmlib-app poms to latest version
- 04:33 PM Revision f22020bf (cdmlib-apps): Revert "Minor"
- This reverts commit 0698ba772c2436c50ee7a27d147d3842fb6aa7e7.
- 04:30 PM Revision 0698ba77 (cdmlib-apps): Minor
- 12:14 PM Revision 406e50c6 (cdmlib): adding note with link to the cdmlib-remote-webapp configuration and bootstrapping wiki page
- 12:08 PM Revision a74e40b8 (cdmlib): #5423 fixing broken area filter join query, by circumventing a bug in lucene LUCENE-4824 (numeric fields not supported in join queries)
12/03/2015
- 11:36 AM Revision 74cf0246 (taxeditor): Fix product version for jre product definition
- 10:48 AM Revision 928db13c (cdmlib): #4716 fixing proplems with testdata by making use of the CleanSweepInsertLoadStrategy.class
- 10:31 AM Revision e04d3588 (taxeditor): fix not ordered terms #4821
- 10:25 AM bug #4821: Changing order of terms not possible
- the removing of the term in ordered vocabularies are now fixed. r26743
and for the not ordered terms r26744
- 10:24 AM Revision 9f402ddf (taxeditor): fix #4821
- 09:47 AM Revision 9550f4b4 (cdmlib): #4716 using BooelanQuery added with Occur.FILTER instead of deprecated search method
12/02/2015
- 07:27 PM bug #5430: P2 update of Taxonomic Editor bundled with JRE does not work
- A possible solution could be a new feature plugin in the editor (let's say eu.etaxonomy.taxeditor.feature.jre) and i...
- 07:21 PM bug #5430: P2 update of Taxonomic Editor bundled with JRE does not work
- The initial problem was due to the fact that the jre product was not uploaded to the update site. But after adding th...
- 07:15 PM bug #5430 (New): P2 update of Taxonomic Editor bundled with JRE does not work
- Trying to update the JRE bundled fails with no updates found.
Related tickets: #4452, #5061
When finished upd... - 06:04 PM Revision f6b282fc (cdmlib): #4716 removing deprecated usage of new BooleanQuery, using BooleanQuery.Builder instead
- 05:40 PM Revision 37f997b9 (taxeditor): Remove unused entity cloning
- 04:43 PM Revision 2a5361d0 (cdmlib): index creation without errors, most lucene search test working again
- - using TextField instead of StringField to enable tokenization for some fields
- @IndexedEmbedded(includeEmbeddedO... - 04:14 PM Revision 1124c268 (cdm-vaadin): Correct launch config
- 01:01 PM Revision bf2387cc (cdm-dataportal): #5423 fixing wrongly formatted taxon url
- 11:57 AM Revision 7f0e1f4e (cdm-dataportal): #5426 updating GBIF service Uri
- 11:53 AM task #3603: Remove creation of dummy DefinedTerm when creating new Term related entities
- Patrick, could you have a look on this.
- 11:50 AM bug #4821: Changing order of terms not possible
- As Cherian won't have time to work on this I switch owner
- 11:42 AM bug #5428 (New): Error handling for local managed server needs to be improved
- Currently the error messages are not giving any useful information.
Jetty API offers a Callback which allows acc... - 11:40 AM bug #5250: Derivate search is slow
- To improve the performance the following has been done:
- I implemented the new formatter framework that provides ... - 11:20 AM Revision 7b9bf97d (cdmlib-apps): delete no data term creation and referencing code
- 11:19 AM task #5427 (New): implement automatic tests for all external links in the ext_links module
- This could be implemented as phpUnit test
- 11:09 AM Revision a41bd5e3 (taxeditor): Fix session problem when creating field unit for a taxon
- 11:09 AM Revision 8bdc4275 (taxeditor): Refactoring type designation gathering according to model change
- 11:09 AM Revision 0847fd74 (taxeditor): Tweak performance for typeDesignation cache in label provider
- 11:09 AM Revision ddd2da06 (taxeditor): Fix refresh problem when creating a FieldUnit with no previous viewer
- content
- 11:09 AM Revision b310b0b0 (taxeditor): Fix possible NPE
- 11:09 AM Revision 7d3bda1d (taxeditor): Remove/Refactor System.out statements
- 11:09 AM Revision 86346121 (taxeditor): Set format for DerivateLabelProvider
- 11:09 AM Revision c06ca2f5 (taxeditor): Refresh only label of the element that has changed
- 11:09 AM Revision a7e3d431 (taxeditor): Use formatter framework in DerivateLabelProvider
- 11:08 AM Revision d496803d (cdmlib): Add uuid based method for getAllChildDerivatives()
- 11:08 AM Revision 95964a96 (cdmlib): Specified method signature as type designations are only available for
- DerivedUnits
- 11:08 AM Revision 6fd1aa50 (cdmlib): Add missing formatter to factory method
- - Fix possible NPEs
- 11:08 AM Revision 0b0a8928 (cdmlib): Implement FormatKeys for all currently used occurrences parameters
- 11:08 AM Revision 64f24974 (cdmlib): Implement first take on formatter framework
- A formatter provides a string representation of an object based on the
selected FormatKeys - 10:46 AM Revision 0c8759ce (cdmlib-apps): minor Fauna Eu changes
12/01/2015
- 05:20 PM Revision e3970b49 (taxeditor): #5420 Add check to dispose input if duplicate editor is already open
- 04:03 PM Revision b6d5d6a6 (taxeditor): #5277 Correct session intialisation and default feature tree caching
- 03:30 PM task #5418 (New): optimize lucene index if possible
- we potentially can optimize the size of the lucene index which also would effect indexing time and resource consumpti...
- 02:40 PM Revision fed20661 (cdmlib): split test for moveDescriptionElements into two tests, on or the correct deletion and the other one for resaving the taxonDescription
- 01:54 PM Revision 6757ea6d (cdmlib): changes for #4960 and #4959
- 12:54 PM Revision 112b48ef (cdmlib): #5415 additional hibernate config file for specific integration test phases
- 11:47 AM bug #5417 (Worksforme): Search not working correctly in Bulk Editor
- From A.Mueller #5267
When I edit a specimen it often does not show up in the bulk editor search anymore afterwor...
11/30/2015
- 02:48 PM Revision 3e01d1be (cdmlib): Show complete stacktrace in import report
- 02:25 PM Revision b00a67e8 (cdmlib): Fix counting of specimens created in ABCD import report
- 02:18 PM bug #5250: Derivate search is slow
- Replying to [[comment9|p.plitzner]]:
> Replying to [[comment7|c.mathew]]:
> Concerning the search performance: Sear... - 02:12 PM bug #5250: Derivate search is slow
- Replying to [[comment9|p.plitzner]]:
> Replying to [[comment7|c.mathew]]:
> The type designations are only retrieve... - 11:55 AM bug #5250: Derivate search is slow
- Replying to [[comment7|c.mathew]]:
> Another main cause of performance issues is the
>
> ... - 01:11 PM Revision 889c74b7 (cdm-dataportal): #5412 updating block content
- 01:06 PM Revision 11c36658 (cdm-dataportal): #5412 adding powered_by_edit icon
- 12:39 PM Revision 79997ad8 (cdmlib-apps): Fauna Europaea import changes
- 10:32 AM Revision 9447b618 (taxeditor): Fix incorrect merge
- 10:29 AM Revision 78d55600 (taxeditor): Removed unused list
- 10:27 AM Revision fc82bdef (taxeditor): Merge branch 'develop' of ssh://dev.e-taxonomy.eu/var/git/taxeditor into
- develop
- 10:25 AM Revision 40b943c7 (cdmlib): Add convenience service methods to occurrence service
- 10:23 AM Revision 44ffca34 (cdmlib): Parse spatial data for gathering event in ABCD import #5169
- 07:01 AM Revision fa9bf282 (taxeditor): list specimen-taxon associations separately in specimen details view
- - remove determination info from derivative label
- 07:00 AM Revision 56a58ffb (taxeditor): Add missing transient services
11/29/2015
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