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From 08/16/2015 to 09/14/2015

09/14/2015

02:36 PM task #5244 (Closed): [DISCUSS] How should specimens be created and edited?
- ~~What happens when clicking @New->Specimen@?~~ => does not exist anymore, but see open issues
- ~~How/where a...
Patrick Plitzner

09/11/2015

01:57 PM feature request #5232: use TaxonBase.getTaggedTitle to get the sec reference in theme_cdm_taxonRelationships()
moving unresolved tickets to next milestone after release of 3.8.0
Andreas Kohlbecker
01:57 PM bug #5191: TransmissionEngineDistribution stops before it is 100% done
moving unresolved tickets to next milestone after release of 3.8.0
Andreas Kohlbecker
01:57 PM feature request #5177: improve perfomance of TransmissionEngineDistribution
moving unresolved tickets to next milestone after release of 3.8.0
Andreas Kohlbecker
01:57 PM feature request #5176: TransmissionEngineDistribution can run on selected taxa
moving unresolved tickets to next milestone after release of 3.8.0
Andreas Kohlbecker
01:57 PM bug #5095: Fix failing dozer related tests
moving unresolved tickets to next milestone after release of 3.8.0
Andreas Kohlbecker
01:57 PM bug #5063: Fix CoL import (split in parts++)
moving unresolved tickets to next milestone after release of 3.8.0
Andreas Kohlbecker
01:57 PM feature request #5055: Integrate Luna installation instruction into standard installation instructions
moving unresolved tickets to next milestone after release of 3.8.0
Andreas Kohlbecker
01:57 PM bug #5048: cdm-server causes unusual high native memory consumption for jvm
moving unresolved tickets to next milestone after release of 3.8.0
Andreas Kohlbecker
01:57 PM feature request #5047: option to show empty distribution maps
moving unresolved tickets to next milestone after release of 3.8.0
Andreas Kohlbecker
01:57 PM task #5022: Check for dependencies from codehaus.org
moving unresolved tickets to next milestone after release of 3.8.0
Andreas Kohlbecker
01:57 PM bug #4944: "Protected" indication for references needs to be improved
moving unresolved tickets to next milestone after release of 3.8.0
Andreas Kohlbecker
01:57 PM bug #4915: Abbrev title for person should never be orange
moving unresolved tickets to next milestone after release of 3.8.0
Andreas Kohlbecker
01:57 PM task #4564: [Post 3.4] Check if originalLabelInfo is handled correctly in CdmDataPortal
moving unresolved tickets to next milestone after release of 3.8.0
Andreas Kohlbecker
01:57 PM feature request #3740: Allow recursively setting the publish bit for TaxonBase
moving unresolved tickets to next milestone after release of 3.8.0
Andreas Kohlbecker
01:57 PM bug #2850: Error message on empty distribution
moving unresolved tickets to next milestone after release of 3.8.0
Andreas Kohlbecker
01:57 PM task #4911: improve performance of distributionInfoFor service
moving unresolved tickets to next milestone after release of 3.8.0
Andreas Kohlbecker
01:57 PM feature request #4366: Transmissionengine Distribution: implement rules for source references
moving unresolved tickets to next milestone after release of 3.8.0
Andreas Kohlbecker
01:57 PM task #3749: Check if all molecular data is shown correctly in data portal [also DISCUSS]
moving unresolved tickets to next milestone after release of 3.8.0
Andreas Kohlbecker

09/10/2015

04:15 PM bug #5211: Error when creating new taxon /problem with sortindex in taxon tree
Should we just close this ticket and wait if the sortindex issue comes up again. I currently can't reproduce.
Or sh...
Andreas Müller
09:05 AM feature request #5232 (New): use TaxonBase.getTaggedTitle to get the sec reference in theme_cdm_taxonRelationships()
requires #5229 to be fixed, related to #5182
code to be changed:
~~~
// Collect all autho...
Andreas Kohlbecker

09/09/2015

01:22 PM bug #5211 (Resolved): Error when creating new taxon /problem with sortindex in taxon tree
Cherian Mathew
08:31 AM bug #4409: fallback areas are not adressable in the shape file
Hallo Eckhard,
die Anzeige und Verarbeitung der Verbreitungsangaben für Euro+Med ist ein recht komplexes Thema, das...
Andreas Kohlbecker

09/08/2015

04:19 PM feature request #4294 (In Progress): order of map legend entries conforms to term order
Andreas Kohlbecker
01:21 PM feature request #4294: order of map legend entries conforms to term order
This is a minor issue, still not fixed. Can be postponed.
Eckhard von Raab-Straube
02:04 PM bug #5216: Changing the CRUD flags of an existing GrantedAuthority in the CdmAuthorityEditorInput causes an MySQLIntegrityConstraintViolationException
not sure if this is related to the remote editor
Andreas Kohlbecker
02:03 PM bug #5216 (Closed): Changing the CRUD flags of an existing GrantedAuthority in the CdmAuthorityEditorInput causes an MySQLIntegrityConstraintViolationException

~~~
login : admin
editor version : 3.8.0.201509071700
server : test.e-taxonomy.eu / edit-test
schema version ...
Andreas Kohlbecker
01:20 PM bug #4409: fallback areas are not adressable in the shape file
It is ok now for Ju and for Cz, but still not fixed for Tcs and Bt! See:
http://test.e-taxonomy.eu/dataportal/previ...
Eckhard von Raab-Straube
12:43 PM feature request #3907: EuroMed: implement condensed "status" string of distribution information
Kommentar zu [Symbols as used in condensed status strings]()
1.) ●Lu endemic (U+25CF BLACK CIRCLE)
endemi...
Eckhard von Raab-Straube
08:25 AM feature request #3907: EuroMed: implement condensed "status" string of distribution information
Replying to [[comment27|a.kohlbecker]]:
> 1. Bitte teste die condensed distribution strings im TestPortal
ERS...
Andreas Kohlbecker
12:34 PM bug #5211: Error when creating new taxon /problem with sortindex in taxon tree
The actual reason for this error is that one of the taxon nodes to be loaded in the navigator has sortIndex -1.
No...
Cherian Mathew
12:20 PM bug #5211 (In Progress): Error when creating new taxon /problem with sortindex in taxon tree
Following error occurs sometimes when creating a taxon.
~~~
java.lang.Exception: login : admin
editor version ...
Cherian Mathew
11:41 AM feature request #5209 (New): Improve server availability check
Currently if the service is not available (because server restarts or anything else you get the unexpected error mess... Andreas Müller
11:27 AM feature request #5208 (New): Change user sets focus to empty login textfield
When using "File"->"Switch User" the login dialog which has empty login and pwd information should put the focus to l... Andreas Müller
08:28 AM bug #5206 (Closed): Status symbols in condensed distribution string repeated for subareas
see parent ticket for the description [#3907#note-17]
see also #5779
Andreas Kohlbecker

09/07/2015

05:43 PM task #5203 (New): Adapt layout for login
Some ideas:
* Connect button should be on bottom
* Cancel button is missing
* Connect button should have ...
Andreas Müller
11:08 AM bug #3866: Link Taxon Editor name to the taxon in the taxon navigator
I agree
Andreas Müller
10:51 AM bug #3866: Link Taxon Editor name to the taxon in the taxon navigator
this is as really annoying bug, so I am voting for solving this bug quite soon.
Andreas Kohlbecker

09/06/2015

03:23 PM bug #5193: Changing the name of a taxon does not refresh the taxon navigator
I forgot to mention that the taxon was a reused taxon, so it was used by 2 taxon nodes. Maybe this is important for t... Andreas Müller
03:17 PM bug #5193 (Worksforme): Changing the name of a taxon does not refresh the taxon navigator
What I did:
* Open an existing taxon (1 of 3 root taxa of a classification)
* Change the name of the taxon via ...
Andreas Müller

09/03/2015

10:12 AM bug #5191 (Worksforme): TransmissionEngineDistribution stops before it is 100% done

This occurred when running the TransmissionEngineDistribution on the Cichorieae database from Rank _Genus_ to _King...
Andreas Kohlbecker
09:56 AM bug #4134: Transmissionengine Distribution seems to miss distributions for higher Taxa
Hi Norbert,
< das verstehe ich nicht ganz: OK, hat keine eigene Distribution, aber die Transmission-Engine-Distribu...
Andreas Kohlbecker
08:33 AM bug #4134 (Feedback): Transmissionengine Distribution seems to miss distributions for higher Taxa
Hallo Andreas,
das verstehe ich nicht ganz: OK, http://cichorieae.e-taxonomy.net/portal/cdm_dataportal/taxon/c34eb6...
Andreas Kohlbecker

09/02/2015

03:25 PM bug #4134 (Worksforme): Transmissionengine Distribution seems to miss distributions for higher Taxa
> wie kommt es eigentlich, dass für das Taxon "Cichorieae" die Transmission Engine Distribution nur so extrem fragmen... Andreas Kohlbecker
02:52 PM feature request #5185 (Worksforme): drag & drop for descriptions and descriptionElements
Drag&Drop does not work anymore (or never worked ?). We should either fix this or completely switch of D&D functional... Katja Luther
12:30 PM feature request #4896: Bulkeditor: deduplication of objects of different type
r25423 for more information why the convertion was aborted, but I think this is only a workaround. the ismergeable Me... Katja Luther
11:54 AM feature request #4896: Bulkeditor: deduplication of objects of different type
the merge of team and person are now possible with r25416 and isMergeable is called before.
Katja Luther

09/01/2015

03:02 PM feature request #5177: improve perfomance of TransmissionEngineDistribution
b63ae2e out-commented code snipped to enable sql logging for performance debugging
Andreas Kohlbecker
01:00 PM feature request #5177: improve perfomance of TransmissionEngineDistribution
Duration of the test in TransmissionEngineDistributionTest run on my T400:
* eu.etaxonomy.cdm.api.service.Transmiss...
Andreas Kohlbecker
12:21 PM feature request #5177 (Closed): improve perfomance of TransmissionEngineDistribution
improve perfomance of TransmissionEngineDistribution
Andreas Kohlbecker
12:08 PM bug #4134: Transmissionengine Distribution seems to miss distributions for higher Taxa
waiting for #5176 to be solved before starting with this issue.
Andreas Kohlbecker
12:07 PM feature request #5176 (Closed): TransmissionEngineDistribution can run on selected taxa
currently the TransmissionEngineDistribution can only be limited to run on a chosen Classification. So it must alway ... Andreas Kohlbecker
11:26 AM bug #5040 (Closed): Allow transmission engine webservice to define area level
done in dc3fd42 r25402 by adding parameters to transmission engine webservice to set targetAreaLevel, lowerRank & upp... Andreas Kohlbecker

08/31/2015

12:09 PM feature request #5174 (Closed): web services for experts implemented
this is a prerequisite for all experts related data portal activities.
Andreas Kohlbecker

08/28/2015

12:13 PM feature request #5172 (New): TaxonInteraction - add ";" and space between records and change order
TaxonInteraction is currently used in the Corvids portal for "Brood parasite" and "Ectoparasite". The latter one havi... Gabriele Dröge

08/27/2015

01:33 PM bug #5163: Converting persons to team members may result in "-empty team-"
maybe we should not use a merge for convertPerson2team because the new created team should have the person as a teamm... Katja Luther

08/25/2015

01:40 PM bug #5163: Converting persons to team members may result in "-empty team-"
in the merge strategy the adding of the person(s) to the new created team is missing.
we need:
* parsing the title ...
Katja Luther
12:52 PM bug #5159: Polytomous key list view needs right click enabling
this seems to be a problem only on windows. on cherians machine the selection also changes with a right-click. if we ... Katja Luther

08/21/2015

08:58 PM bug #5163 (Closed): Converting persons to team members may result in "-empty team-"
A tried to convert a person to a team, but there was no member added to the team and the title cache is only "-empty ... Andreas Müller
05:36 PM bug #5104: prevent MarkerTypes from being deleted when there are Marker entities using that type
This should be handled for ALL term types, not only marker types.
I wonder why hibernate is not aware of the term b...
Andreas Müller
03:37 PM bug #5159 (New): Polytomous key list view needs right click enabling
Right click on the PK list does not enable the underlying PK but it should (and it does e.g. in the Taxon Navigator f... Andreas Müller

08/17/2015

01:29 PM bug #5149: Remove UNIQUE index on Sequence_Reference.citations_id column
citations was @OneToMany before refactoring the molecular package. Seems like I forgot to add the remove index comma... Andreas Müller
11:39 AM bug #5149 (Closed): Remove UNIQUE index on Sequence_Reference.citations_id column
Summary was: "some Sequence_Reference tables have UNIQUE index on citations_id column"
I already deleted this on...
Patrick Plitzner
 

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