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From 08/16/2015 to 09/14/2015

09/14/2015

06:56 PM Revision c51a943c (cdm-server): Merge branch 'release/3.9.0'
jenkins
06:56 PM Revision 3ecaed22 (cdm-server): Updating develop poms back to pre merge state
jenkins
06:56 PM Revision d70cd18d (cdm-server): Merge branch 'master' into develop
jenkins
06:56 PM Revision 9669e490 (cdm-server): updating develop poms to master versions to avoid merge conflicts
jenkins
06:55 PM Revision 5a0f06ea (cdm-server): updating poms for branch'release/3.9.0' with non-snapshot versions
jenkins
06:44 PM Revision 16279e66 (cdm-webapp): Merge branch 'release/3.9.0'
jenkins
06:44 PM Revision 9b80d6bb (cdm-webapp): Updating develop poms back to pre merge state
jenkins
06:44 PM Revision 095c5efb (cdm-webapp): Merge branch 'master' into develop
jenkins
06:44 PM Revision 11844611 (cdm-webapp): updating develop poms to master versions to avoid merge conflicts
jenkins
06:44 PM Revision 53678ef7 (cdm-webapp): updating poms for branch'release/3.9.0' with non-snapshot versions
jenkins
06:44 PM Revision c107da4d (cdm-webapp): jenkins bumping cdmlib.remote.webapp.version and cdm.vaadin.version to 3.9.0
jenkins
06:32 PM Revision 5b3727a7 (cdm-vaadin): Updating develop poms back to pre merge state
jenkins
06:32 PM Revision 65ebaa7f (cdm-vaadin): Merge branch 'master' into develop
jenkins
06:32 PM Revision c1c14325 (cdm-vaadin): Merge branch 'release/3.9.0'
jenkins
06:32 PM Revision 1949af7d (cdm-vaadin): updating develop poms to master versions to avoid merge conflicts
jenkins
06:30 PM Revision 30698324 (cdm-vaadin): updating poms for branch'release/3.9.0' with non-snapshot versions
jenkins
06:29 PM Revision 0559d46f (cdmlib): Updating develop poms back to pre merge state
jenkins
06:29 PM Revision ac9a88fe (cdmlib): Merge branch 'master' into develop
jenkins
06:29 PM Revision 1faebd77 (cdmlib): updating develop poms to master versions to avoid merge conflicts
jenkins
06:29 PM Revision 4a06fb9b (cdmlib): Merge branch 'release/3.9.0'
jenkins
06:08 PM Revision 23be44a9 (cdmlib): updating poms for branch'release/3.9.0' with non-snapshot versions
jenkins
06:07 PM Revision fdff7002 (cdm-webapp): jenkins bumping cdmlib.remote.webapp.version and cdm.vaadin.version to 3.9.0-SNAPSHOT
jenkins
06:07 PM Revision f6600b03 (cdm-webapp): updating poms for 3.10.0-SNAPSHOT development
jenkins
06:07 PM Revision 37d2a2fb (cdm-webapp): jenkins bumping cdmlib.remote.webapp.version and cdm.vaadin.version to 3.10.0-SNAPSHOT
jenkins
06:02 PM Revision 1b8d0e4d (taxeditor): updating poms for 3.10.0-SNAPSHOT development
jenkins
06:01 PM Revision 8c9356dc (taxeditor): Revert project versions to 3.9.0-SNAPSHOT
jenkins
06:00 PM Revision 129e2ea3 (taxeditor): Updated version in pom / project files to taxeditor version : 3.10.0-SNAPSHOT and cdmlib version : 3.10.0-SNAPSHOT
jenkins
06:00 PM Revision 242020c0 (taxeditor): re-initialise group object in input constructor
Cherian Mathew
06:00 PM Revision bbce7a69 (cdm-vaadin): jenkins bumping cdmlib.version to 3.9.0-SNAPSHOT
jenkins
06:00 PM Revision 6e23d11d (cdm-vaadin): updating poms for 3.10.0-SNAPSHOT development
jenkins
06:00 PM Revision 0e504592 (cdm-server): updating poms for 3.10.0-SNAPSHOT development
jenkins
06:00 PM Revision 44b69d7a (cdm-vaadin): jenkins bumping cdmlib.version to 3.10.0-SNAPSHOT
jenkins
05:57 PM Revision 59a7d976 (cdmlib): updating poms for 3.10.0-SNAPSHOT development
jenkins
05:01 PM Revision f62928e4 (taxeditor): #5202 Added alphabetical sort for cdm instances list
Cherian Mathew
04:37 PM Revision 667025a5 (taxeditor): Merge branch 'develop' into remoting-4.0
Conflicts:
eu.etaxonomy.taxeditor.editor/src/main/java/eu/etaxonomy/taxeditor/editor/handler/create/NewSpecimenHandl...
Cherian Mathew
04:21 PM Revision c9f13bde (taxeditor): #5242, #5223 Improve performance of derivate loading and editing
Cherian Mathew
02:50 PM Revision 17653afc (taxeditor): Use wizard to create new specimen
Patrick Plitzner
02:38 PM Revision f57943c9 (taxeditor): Trim code
Patrick Plitzner
02:36 PM task #5244 (Closed): [DISCUSS] How should specimens be created and edited?
- ~~What happens when clicking @New->Specimen@?~~ => does not exist anymore, but see open issues
- ~~How/where a...
Patrick Plitzner
01:51 PM Revision 445950fe (cdmlib): Preliminary ignore IPNI test
Andreas Müller
11:13 AM Revision 342606ca (taxeditor): Keep media view and factual data view enabled when no significant
selection occurs (#5195) Patrick Plitzner
11:04 AM Revision 2579f2ed (taxeditor): Trim code
Patrick Plitzner
11:03 AM Revision b2b9e057 (cdm-dataportal): Option to view the diff of default and user settings of the name render templates and part definitions
Andreas Kohlbecker
11:01 AM Revision 9498e850 (cdm-dataportal): Updating jquery-ui to 1.8.24
Andreas Kohlbecker

09/11/2015

05:36 PM Revision 32d99982 (taxeditor): #5223 Replace service methods with similar entity calls
Cherian Mathew
05:35 PM Revision 207c35e6 (cdmlib): #5223 Copy utility method from service to derived unit
Cherian Mathew
05:11 PM Revision 45546a91 (cdmlib): Deprecate getCharacterData method in service layer
Andreas Müller
05:11 PM Revision e9829ef9 (cdmlib): Implement hasCharacterData and isCharacterData.
And fix characterData semantics. Andreas Müller
05:11 PM Revision 887126ca (cdmlib): move specimen.getCharacterData to model
Andreas Müller
03:37 PM Revision d1e3ac25 (cdm-dataportal): Changing the text that hints to the Debug block
Andreas Kohlbecker
03:29 PM Revision 253716a1 (taxeditor): Fix incorrect merge
Cherian Mathew
02:42 PM Revision c70f9111 (taxeditor): Fix incorrect merge
Cherian Mathew
02:15 PM Revision 98060576 (taxeditor): Merge branch 'release/3.8.0'
Conflicts:
eu.etaxonomy.taxeditor.application/META-INF/MANIFEST.MF
eu.etaxonomy.taxeditor.application/pom.xml
eu.e...
jenkins
01:57 PM feature request #5232: use TaxonBase.getTaggedTitle to get the sec reference in theme_cdm_taxonRelationships()
moving unresolved tickets to next milestone after release of 3.8.0
Andreas Kohlbecker
01:57 PM bug #5191: TransmissionEngineDistribution stops before it is 100% done
moving unresolved tickets to next milestone after release of 3.8.0
Andreas Kohlbecker
01:57 PM feature request #5177: improve perfomance of TransmissionEngineDistribution
moving unresolved tickets to next milestone after release of 3.8.0
Andreas Kohlbecker
01:57 PM feature request #5176: TransmissionEngineDistribution can run on selected taxa
moving unresolved tickets to next milestone after release of 3.8.0
Andreas Kohlbecker
01:57 PM bug #5095: Fix failing dozer related tests
moving unresolved tickets to next milestone after release of 3.8.0
Andreas Kohlbecker
01:57 PM bug #5063: Fix CoL import (split in parts++)
moving unresolved tickets to next milestone after release of 3.8.0
Andreas Kohlbecker
01:57 PM feature request #5055: Integrate Luna installation instruction into standard installation instructions
moving unresolved tickets to next milestone after release of 3.8.0
Andreas Kohlbecker
01:57 PM bug #5048: cdm-server causes unusual high native memory consumption for jvm
moving unresolved tickets to next milestone after release of 3.8.0
Andreas Kohlbecker
01:57 PM feature request #5047: option to show empty distribution maps
moving unresolved tickets to next milestone after release of 3.8.0
Andreas Kohlbecker
01:57 PM task #5022: Check for dependencies from codehaus.org
moving unresolved tickets to next milestone after release of 3.8.0
Andreas Kohlbecker
01:57 PM bug #4944: "Protected" indication for references needs to be improved
moving unresolved tickets to next milestone after release of 3.8.0
Andreas Kohlbecker
01:57 PM bug #4915: Abbrev title for person should never be orange
moving unresolved tickets to next milestone after release of 3.8.0
Andreas Kohlbecker
01:57 PM task #4564: [Post 3.4] Check if originalLabelInfo is handled correctly in CdmDataPortal
moving unresolved tickets to next milestone after release of 3.8.0
Andreas Kohlbecker
01:57 PM feature request #3740: Allow recursively setting the publish bit for TaxonBase
moving unresolved tickets to next milestone after release of 3.8.0
Andreas Kohlbecker
01:57 PM bug #2850: Error message on empty distribution
moving unresolved tickets to next milestone after release of 3.8.0
Andreas Kohlbecker
01:57 PM task #4911: improve performance of distributionInfoFor service
moving unresolved tickets to next milestone after release of 3.8.0
Andreas Kohlbecker
01:57 PM feature request #4366: Transmissionengine Distribution: implement rules for source references
moving unresolved tickets to next milestone after release of 3.8.0
Andreas Kohlbecker
01:57 PM task #3749: Check if all molecular data is shown correctly in data portal [also DISCUSS]
moving unresolved tickets to next milestone after release of 3.8.0
Andreas Kohlbecker
01:45 PM Revision 7ebed46b (taxeditor): Revert osgi versions
jenkins
12:52 PM Revision 03f4f6f7 (cdm-dataportal): #5182 fixing bug in name render template processing
Andreas Kohlbecker
10:46 AM Revision c6e78558 (cdm-dataportal): #5182 fixing bug related to hybrid names
- cloning object to avoid modification of the original Andreas Kohlbecker
10:36 AM Revision 993c5743 (taxeditor): Correct version
Cherian Mathew
10:35 AM Revision dbe1e57d (taxeditor): Correct version
Cherian Mathew
10:11 AM Revision b3a806e8 (cdm-dataportal): #5182 name render part definition accepted_taxon.taxon_page_synonymy
- this allows styling the accepted taxon in the synonymy differently Andreas Kohlbecker
09:46 AM Revision 0b7bbf68 (cdm-dataportal): moving more functions to name.inc
Andreas Kohlbecker
09:42 AM Revision 2e31ea9e (cdm-dataportal): Register the new file name.inc
Andreas Kohlbecker
09:40 AM Revision 2fd6da0b (cdm-dataportal): moving non theme functions to include files and module
- name render related functions to new file name.inc
- other functions to the module file
Andreas Kohlbecker

09/10/2015

09:37 PM Revision b03f7ec6 (taxeditor): Correct osgi version
Cherian Mathew
06:48 PM Revision 8555b14b (taxeditor): Update snapshot version
Cherian Mathew
06:39 PM Revision bd67d764 (cdmlib): Add taxon to updated objects when taxon is not to be deleted
Cherian Mathew
06:25 PM Revision b94b6f2a (taxeditor): #5237 Add changes from stand alone handler
Cherian Mathew
06:19 PM Revision 2eaa13b4 (cdm-dataportal): #5182 litte bugfix for last commit : providing feedback on the version of name render part definition and templates
Andreas Kohlbecker
06:18 PM Revision 09cfbd9d (cdm-server): Updating develop poms back to pre merge state
jenkins
06:18 PM Revision 3560acad (cdm-server): Merge branch 'master' into develop
jenkins
06:18 PM Revision b37e303e (cdm-server): Merge branch 'release/3.8.0'
jenkins
06:18 PM Revision 677e3597 (cdm-server): updating develop poms to master versions to avoid merge conflicts
jenkins
06:17 PM Revision d4687311 (cdm-server): updating poms for branch'release/3.8.0' with non-snapshot versions
jenkins
06:11 PM Revision 1a01f6dd (cdm-dataportal): #5182 providing feedback on the version of name render part definition and templates
Andreas Kohlbecker
06:06 PM Revision 91d744f0 (cdm-webapp): Updating develop poms back to pre merge state
jenkins
06:06 PM Revision fd6f8b27 (cdm-webapp): Merge branch 'master' into develop
jenkins
06:06 PM Revision f7836b8d (cdm-webapp): updating develop poms to master versions to avoid merge conflicts
jenkins
06:06 PM Revision aa7323c9 (cdm-webapp): Merge branch 'release/3.8.0'
jenkins
06:06 PM Revision 2ad1aa92 (cdm-webapp): updating poms for branch'release/3.8.0' with non-snapshot versions
jenkins
06:06 PM Revision e5e4515a (cdm-webapp): jenkins bumping cdmlib.remote.webapp.version and cdm.vaadin.version to 3.8.0
jenkins
06:04 PM Revision 97fb2a23 (cdm-vaadin): Updating develop poms back to pre merge state
jenkins
06:04 PM Revision 489f01dd (cdm-vaadin): Merge branch 'master' into develop
jenkins
06:04 PM Revision ccab0dd5 (cdm-vaadin): updating develop poms to master versions to avoid merge conflicts
jenkins
06:04 PM Revision f9abd070 (cdm-vaadin): Merge branch 'release/3.8.0'
jenkins
06:01 PM Revision 5a626bb1 (cdm-vaadin): updating poms for branch'release/3.8.0' with non-snapshot versions
jenkins
05:59 PM Revision ad5fbba2 (taxeditor): updating poms for branch'release/3.8.0' with non-snapshot versions
jenkins
05:58 PM Revision 3dba2cab (taxeditor): Revert project versions to 3.8.0-SNAPSHOT
jenkins
05:58 PM Revision 18358a52 (taxeditor): Merge branch 'develop' into remoting-4.0
Conflicts:
eu.etaxonomy.taxeditor.cdmlib/.classpath
eu.etaxonomy.taxeditor.cdmlib/META-INF/MANIFEST.MF
eu.etaxonom...
Cherian Mathew
05:57 PM Revision aeb50964 (taxeditor): Updated version in pom / project files to taxeditor version : 3.8.0 and cdmlib version : 3.8.0
jenkins
05:55 PM Revision 7dac0ba4 (cdmlib): Updating develop poms back to pre merge state
jenkins
05:55 PM Revision d8812195 (cdmlib): Merge branch 'master' into develop
jenkins
05:55 PM Revision 1f957550 (cdmlib): updating develop poms to master versions to avoid merge conflicts
jenkins
05:55 PM Revision d00a3071 (cdmlib): Merge branch 'release/3.8.0'
jenkins
05:42 PM Revision 467d468b (taxeditor): Merge branch 'develop' into remoting-4.0
Conflicts:
eu.etaxonomy.taxeditor.editor/src/main/java/eu/etaxonomy/taxeditor/editor/view/dataimport/transientServic...
Cherian Mathew
05:39 PM Revision c8c879d8 (cdm-dataportal): #5182 some usages of theme_cdm_taxonName have been not adapded to the new function render_taxon_or_name - fixing this
Andreas Kohlbecker
05:37 PM Revision 07883b40 (cdmlib): updating poms for branch'release/3.8.0' with non-snapshot versions
jenkins
05:18 PM Revision 509ba977 (cdm-vaadin): Adapt to tagged text methods change to protected
Cherian Mathew
05:17 PM Revision fb2c5dc3 (cdm-webapp): jenkins bumping cdmlib.remote.webapp.version and cdm.vaadin.version to 3.8.0-SNAPSHOT
jenkins
05:17 PM Revision bbd0e677 (cdm-webapp): updating poms for 3.9.0-SNAPSHOT development
jenkins
05:16 PM Revision 5fb66b0e (cdm-webapp): jenkins bumping cdmlib.remote.webapp.version and cdm.vaadin.version to 3.9.0-SNAPSHOT
jenkins
05:09 PM Revision 084507a8 (cdm-vaadin): Adapt to tagged text methods change to protected
Cherian Mathew
05:01 PM Revision cecbda47 (taxeditor): Updated version in pom / project files to taxeditor version : 3.8.0-SNAPSHOT and cdmlib version : 3.8.0-SNAPSHOT
jenkins
05:00 PM Revision f27dd202 (taxeditor): updating poms for 3.9.0-SNAPSHOT development
jenkins
05:00 PM Revision 7a0c52f3 (taxeditor): updating poms for 3.8.0 branch with snapshot versions
jenkins
04:59 PM Revision d14cdfb8 (taxeditor): Revert project versions to 3.8.0-SNAPSHOT
jenkins
04:57 PM Revision 4991d5fa (taxeditor): Updated version in pom / project files to taxeditor version : 3.9.0-SNAPSHOT and cdmlib version : 3.9.0-SNAPSHOT
jenkins
04:56 PM Revision 03eeb27b (cdm-server): updating poms for 3.9.0-SNAPSHOT development
jenkins
04:55 PM Revision c6366d49 (cdm-vaadin): jenkins bumping cdmlib.version to 3.8.0-SNAPSHOT
jenkins
04:55 PM Revision dcd0919e (cdm-vaadin): updating poms for 3.9.0-SNAPSHOT development
jenkins
04:55 PM Revision 05744d69 (cdm-vaadin): jenkins bumping cdmlib.version to 3.9.0-SNAPSHOT
jenkins
04:52 PM Revision 5f339b7e (cdmlib): updating poms for 3.9.0-SNAPSHOT development
jenkins
04:48 PM Revision 44069fdc (cdmlib): minor
Andreas Müller
04:22 PM Revision 627fcabe (taxeditor): Revert "Updated version in pom / project files to taxeditor version : 3.9.0-SNAPSHOT and cdmlib version : 3.9.0-SNAPSHOT"
This reverts commit 7ed2ce1e9eca6a9dd72c740e72efdcd6ef1135c9. Andreas Kohlbecker
04:22 PM Revision 69040a4b (taxeditor): Revert "Revert project versions to 3.8.0-SNAPSHOT"
This reverts commit e8268306693f047beef36ce53524adc00946cf74. Andreas Kohlbecker
04:19 PM Revision 42da45e2 (cdm-server): Revert "updating poms for 3.9.0-SNAPSHOT development"
This reverts commit 8645b5a1bcf647d6d1ea7eb649fc611a432b997c. Andreas Kohlbecker
04:18 PM Revision f2eb05a0 (cdm-webapp): Revert "jenkins bumping cdmlib.remote.webapp.version and cdm.vaadin.version to 3.9.0-SNAPSHOT"
This reverts commit 9c36ea09e7c66fe685944814c8beb30f4c1bcf40. Andreas Kohlbecker
04:17 PM Revision 36a011b4 (cdm-vaadin): Revert "jenkins bumping cdmlib.version to 3.9.0-SNAPSHOT"
This reverts commit 11e5718ac1ddbd7f9efc9d989e6d9147cdb28347. Andreas Kohlbecker
04:15 PM Revision 6b8d3592 (cdmlib): Revert "updating poms for 3.9.0-SNAPSHOT development"
This reverts commit 1a052a9893afe93249cf81603f410a4e454c305a. Andreas Kohlbecker
04:15 PM bug #5211: Error when creating new taxon /problem with sortindex in taxon tree
Should we just close this ticket and wait if the sortindex issue comes up again. I currently can't reproduce.
Or sh...
Andreas Müller
03:54 PM Revision e8268306 (taxeditor): Revert project versions to 3.8.0-SNAPSHOT
jenkins
03:53 PM Revision 7ed2ce1e (taxeditor): Updated version in pom / project files to taxeditor version : 3.9.0-SNAPSHOT and cdmlib version : 3.9.0-SNAPSHOT
jenkins
03:52 PM Revision 9c36ea09 (cdm-webapp): jenkins bumping cdmlib.remote.webapp.version and cdm.vaadin.version to 3.9.0-SNAPSHOT
jenkins
03:51 PM Revision 8645b5a1 (cdm-server): updating poms for 3.9.0-SNAPSHOT development
jenkins
03:51 PM Revision 11e5718a (cdm-vaadin): jenkins bumping cdmlib.version to 3.9.0-SNAPSHOT
jenkins
03:51 PM Revision 1a052a98 (cdmlib): updating poms for 3.9.0-SNAPSHOT development
jenkins
03:43 PM Revision 1e3d56bb (cdmlib): fixing move Accepted taxon to synonym
U-BGBM\k.luther
03:20 PM Revision 63c3ac73 (cdm-dataportal): #5182 using the taggedTitle which is now provided for TaxonBase instances
- turing theme_cdm_taxonName into normal function render_taxon_or_name wich now can take taxa and names
- hamoniz...
Andreas Kohlbecker
03:07 PM Revision e75cf4e4 (cdmlib): clean up taxon cache strategy
Andreas Müller
03:07 PM Revision a9bde125 (cdmlib): Document new initListener method (#5161)
Andreas Müller
02:05 PM Revision feb6d41a (taxeditor): #5234 Add correct updated objects to change event
Cherian Mathew
02:03 PM Revision 804215c3 (cdmlib): #5234 Add required updated taxon nodes
Cherian Mathew
12:58 PM Revision f63cb922 (cdmlib): Simplify getNameTags in Taxon cache strategy (#5229)
Andreas Müller
12:26 PM Revision c4de108d (cdmlib): Create new tag type for secundum reference (#5229)
Andreas Müller
11:42 AM Revision c5e1782d (cdmlib): Allow retrieving objects via ICommonService and UUID (#5160)
Andreas Müller
11:40 AM Revision 57c49a93 (cdmlib): #3991 hiding the delegeate boolean properties in TaggedText by making them protected
Andreas Kohlbecker
11:26 AM Revision f0eef945 (taxeditor): #5233 Correct login / password persistence
Cherian Mathew
11:24 AM Revision 72412928 (cdmlib): #5229 avoiding LIE by autoinitializing the taggedTitle for TaxonBase
Andreas Kohlbecker
10:59 AM Revision 3b9c3a92 (taxeditor): Disable persisting login preferences when connecting to dev server
Cherian Mathew
10:47 AM Revision d26d8c57 (cdmlib): #5229 implementing output of TaxonBase.getTaggedTitle in web services
- turning the TaxonBeanProcessor into TaxonBaseBeanProcessor
- adding taggedTitle to the taxon instances returned...
Andreas Kohlbecker
10:42 AM Revision 48f63837 (taxeditor): Add initModel call to constructor since it requires the type to be set beforehand
Cherian Mathew
09:35 AM Revision cce928f3 (cdmlib): bug fixes regarding performacne measuring
Andreas Kohlbecker
09:35 AM Revision 2a7668fb (cdmlib): more detailed measuring time of accumulation in TransmissionEngineDistribution for performance testing
Andreas Kohlbecker
09:35 AM Revision 46800822 (cdmlib): measuring time of accumulation in TransmissionEngineDistribution for performance testing
Andreas Kohlbecker
09:35 AM Revision a12582ff (cdmlib): adding more test cases for ClassificationService
- testTaxonNodeByNameComparator now with hybrid name
- testlistRankSpecificRootNodes better testing of pager
Andreas Kohlbecker
09:35 AM Revision 7a6c28bb (cdmlib): using UNKNOWN_RANK as default lowerRank in transmission engine
Andreas Kohlbecker
09:35 AM Revision 70082ec7 (cdmlib): simplifying test code
Andreas Kohlbecker
09:05 AM feature request #5232 (New): use TaxonBase.getTaggedTitle to get the sec reference in theme_cdm_taxonRelationships()
requires #5229 to be fixed, related to #5182
code to be changed:
~~~
// Collect all autho...
Andreas Kohlbecker
08:35 AM Revision c59e35c4 (cdmlib): Deproxy name in taxon cache strategy.
Andreas Müller
08:33 AM Revision a81ba5dc (cdm-dataportal): #5182 removing dead code and fixing unrelated bug
Andreas Kohlbecker

09/09/2015

10:17 PM Revision 3b2bbc66 (cdmlib): Fix tagged title generation for taxa
Andreas Müller
10:16 PM Revision d28cf137 (cdmlib-apps): Remove use of deprecated methods
Andreas Müller
05:47 PM Revision 2e93b829 (taxeditor): #5225 Replace saveOrUpdate with merge for new entity wizards
Cherian Mathew
05:45 PM Revision fe43cd3b (cdmlib): Implement taggedTitle for taxon base #5229
Andreas Müller
04:15 PM Revision 43998144 (cdm-dataportal): #5182 implementing flexible configuration for displaying sec references in the portal
- configuration of the secReference display via name render templates
- replacing almost all old secReference rende...
Andreas Kohlbecker
04:03 PM Revision 8e5de2f8 (taxeditor): Moved "Original Name" field to subclass (#5133)
Patrick Plitzner
03:32 PM Revision e387912f (taxeditor): Trim code
Patrick Plitzner
03:17 PM Revision 8347a92f (taxeditor): Disable media view for taxon bulk editor with no selection (#5162)
Patrick Plitzner
02:42 PM Revision 89000ff8 (taxeditor): Fixed potnetial NPE
Patrick Plitzner
02:16 PM Revision e87238ec (taxeditor): #5228 Remove unnecessary model init on refresh
Cherian Mathew
01:53 PM Revision 2f590a3e (taxeditor): Cleanup unused code
Cherian Mathew
01:48 PM Revision b7291099 (cdmlib): #5220 Enable transactional write to delete method
Cherian Mathew
01:43 PM Revision a9108118 (taxeditor): Optimize Code #5103
Patrick Plitzner
01:22 PM Revision 34530272 (taxeditor): I18n for derivative module
Patrick Plitzner
01:22 PM Revision e630b8f8 (taxeditor): I18n for Specimen Editor
Patrick Plitzner
01:22 PM Revision 02a589cc (taxeditor): Replace URL with URI in exception message
Patrick Plitzner
01:22 PM bug #5211 (Resolved): Error when creating new taxon /problem with sortindex in taxon tree
Cherian Mathew
01:19 PM Revision 4c431dcb (cdmlib): #5224 Add new change synonym to acc. taxon method
Cherian Mathew
01:18 PM Revision 8bd80bc8 (taxeditor): Add new service call
Cherian Mathew
01:15 PM Revision dfb08879 (taxeditor): #5224 Using new cdmlib call for changing synonym to accepted taxon
Cherian Mathew
11:08 AM Revision 5f6be575 (taxeditor): Correct german translation (#5062, #5199)
Patrick Plitzner
08:31 AM bug #4409: fallback areas are not adressable in the shape file
Hallo Eckhard,
die Anzeige und Verarbeitung der Verbreitungsangaben für Euro+Med ist ein recht komplexes Thema, das...
Andreas Kohlbecker

09/08/2015

08:49 PM Revision 9f1df71f (taxeditor): Merge branch 'develop' into remoting-4.0
Conflicts:
eu.etaxonomy.taxeditor.editor/src/main/java/eu/etaxonomy/taxeditor/editor/view/dataimport/transientServic...
Cherian Mathew
07:09 PM Revision d9848a0c (taxeditor): Add unimplemented methods
Cherian Mathew
05:55 PM Revision bcc5b52f (taxeditor): #5213 Use method to move descriptions using uuids
Cherian Mathew
05:54 PM Revision c0d58a8f (cdmlib): #5213 Add method to move descriptions using uuids as args
Cherian Mathew
05:54 PM Revision c592b0aa (cdmlib): Add annotation service to application config
Cherian Mathew
05:54 PM Revision 67cad510 (taxeditor): Add annotation service to config
Cherian Mathew
05:31 PM Revision f0002d12 (cdmlib): Update test database schema to allow null for consensus sequence
Andreas Müller
04:19 PM feature request #4294 (In Progress): order of map legend entries conforms to term order
Andreas Kohlbecker
01:21 PM feature request #4294: order of map legend entries conforms to term order
This is a minor issue, still not fixed. Can be postponed.
Eckhard von Raab-Straube
04:04 PM Revision f9eec95e (cdmlib): Update test database schema to allow null for consensus sequence
Andreas Müller
04:00 PM Revision 0ed26a71 (taxeditor): Merge branch 'develop' into LibrAlign
Patrick Plitzner
03:34 PM Revision 33ec4d77 (taxeditor): Trim code
Patrick Plitzner
02:08 PM Revision 331b2aa6 (cdmlib): Set sequence to null when removing a single read #5200
Patrick Plitzner
02:04 PM bug #5216: Changing the CRUD flags of an existing GrantedAuthority in the CdmAuthorityEditorInput causes an MySQLIntegrityConstraintViolationException
not sure if this is related to the remote editor
Andreas Kohlbecker
02:03 PM bug #5216 (Closed): Changing the CRUD flags of an existing GrantedAuthority in the CdmAuthorityEditorInput causes an MySQLIntegrityConstraintViolationException

~~~
login : admin
editor version : 3.8.0.201509071700
server : test.e-taxonomy.eu / edit-test
schema version ...
Andreas Kohlbecker
02:03 PM Revision 42ea3f73 (taxeditor): #5214 Fix initialization of remoting session
Cherian Mathew
01:20 PM bug #4409: fallback areas are not adressable in the shape file
It is ok now for Ju and for Cz, but still not fixed for Tcs and Bt! See:
http://test.e-taxonomy.eu/dataportal/previ...
Eckhard von Raab-Straube
12:43 PM feature request #3907: EuroMed: implement condensed "status" string of distribution information
Kommentar zu [Symbols as used in condensed status strings]()
1.) ●Lu endemic (U+25CF BLACK CIRCLE)
endemi...
Eckhard von Raab-Straube
08:25 AM feature request #3907: EuroMed: implement condensed "status" string of distribution information
Replying to [[comment27|a.kohlbecker]]:
> 1. Bitte teste die condensed distribution strings im TestPortal
ERS...
Andreas Kohlbecker
12:34 PM bug #5211: Error when creating new taxon /problem with sortindex in taxon tree
The actual reason for this error is that one of the taxon nodes to be loaded in the navigator has sortIndex -1.
No...
Cherian Mathew
12:20 PM bug #5211 (In Progress): Error when creating new taxon /problem with sortindex in taxon tree
Following error occurs sometimes when creating a taxon.
~~~
java.lang.Exception: login : admin
editor version ...
Cherian Mathew
11:41 AM feature request #5209 (New): Improve server availability check
Currently if the service is not available (because server restarts or anything else you get the unexpected error mess... Andreas Müller
08:28 AM bug #5206 (Closed): Status symbols in condensed distribution string repeated for subareas
see parent ticket for the description [#3907#note-17]
see also #5779
Andreas Kohlbecker

09/07/2015

06:35 PM Revision 5535769b (taxeditor): Replace saveOrUpdate with merge
Cherian Mathew
06:14 PM Revision c0444628 (cdmlib): Add primer / amplification service to remoting
Cherian Mathew
05:43 PM task #5203 (New): Adapt layout for login
Some ideas:
* Connect button should be on bottom
* Cancel button is missing
* Connect button should have ...
Andreas Müller
05:39 PM Revision 937cc32d (taxeditor): Ignore test server ping tests
Cherian Mathew
05:17 PM Revision 96cf550a (taxeditor): Ignore edit test server ping test
Cherian Mathew
05:05 PM Revision e1ab27da (taxeditor): Ignore unauthenticated user test for now
Cherian Mathew
03:29 PM Revision 4a34b657 (taxeditor): #5052 Integrate remoting in granted authorites editor
Cherian Mathew
03:29 PM Revision 17e4c925 (taxeditor): Disable login preferences in case of dev server
Cherian Mathew
03:28 PM Revision cb9e95fa (taxeditor): Add test for unathenticated user
Cherian Mathew
03:28 PM Revision caba41c4 (cdmlib): Allow authenticated access for users with all roles
Cherian Mathew
02:45 PM Revision ec683ee1 (taxeditor): Enhance handling of simple and advanced media view
- Buffer URI string in case of parsing errors
- disable toggling when media conists of more than one representation
...
Patrick Plitzner
01:21 PM Revision f343b1b5 (taxeditor): Close conversation when closing DerivateSearchView
Patrick Plitzner
01:21 PM Revision 0320f89e (taxeditor): Fix NPE for advanced media view
Patrick Plitzner
12:28 PM Revision ec050fef (cdmlib): #5019 Set correct updated objects
Cherian Mathew
12:27 PM Revision bc7c5cb9 (cdmlib): #5138, #5102 Fix cascade delete orphan error for address list in contact entity
Cherian Mathew
12:26 PM Revision e6613683 (taxeditor): Enable test for taxon nodes deletion
Cherian Mathew
12:25 PM Revision bde20ac8 (taxeditor): Check if updated objects are null
Cherian Mathew
12:25 PM Revision c237492d (taxeditor): Set read timeout for services to infinite
Cherian Mathew
11:38 AM Revision 61a149da (cdm-server): commenting unimplemented action
Andreas Kohlbecker
11:08 AM bug #3866: Link Taxon Editor name to the taxon in the taxon navigator
I agree
Andreas Müller
10:51 AM bug #3866: Link Taxon Editor name to the taxon in the taxon navigator
this is as really annoying bug, so I am voting for solving this bug quite soon.
Andreas Kohlbecker
10:58 AM Revision 390328ab (taxeditor): Replace spring application context loading with programmatic loading
Cherian Mathew
10:09 AM Revision 12f13ee5 (cdmlib): Make default constructor public for bean loading
Cherian Mathew

09/06/2015

03:23 PM bug #5193: Changing the name of a taxon does not refresh the taxon navigator
I forgot to mention that the taxon was a reused taxon, so it was used by 2 taxon nodes. Maybe this is important for t... Andreas Müller
03:17 PM bug #5193 (Worksforme): Changing the name of a taxon does not refresh the taxon navigator
What I did:
* Open an existing taxon (1 of 3 root taxa of a classification)
* Change the name of the taxon via ...
Andreas Müller

09/04/2015

12:09 PM Revision 1128808d (cdmlib): Correct delete behaviour
Cherian Mathew
11:42 AM Revision 6ac1f1fd (taxeditor): Correct test to use uuids
Cherian Mathew
10:37 AM Revision 23d85b17 (taxeditor): Fix new occurrence / sequence move method calls
Cherian Mathew
10:33 AM Revision 1baeb336 (taxeditor): Correct transient service method
Cherian Mathew
12:22 AM Revision 9bfdad13 (cdmlib-apps): use listRankSpecificRootNodes instead of deprecated methods
Andreas Müller

09/03/2015

07:07 PM Revision 94b8c8af (taxeditor): #5187 Use new move methods with uuids as args
Cherian Mathew
07:06 PM Revision 77c22958 (cdmlib): #5187 Add move methods with uuids as args
Cherian Mathew
06:42 PM Revision cad55660 (cdmlib): Correct setting of status when moving derivates
Cherian Mathew
06:31 PM Revision 025f3eb9 (taxeditor): Update operation for move taxon nodes
Cherian Mathew
06:23 PM Revision 2a868994 (cdmlib): Make new move method write on commit
Cherian Mathew
05:54 PM Revision 41736211 (taxeditor): Add unimplemented methods
Cherian Mathew
05:54 PM Revision 44ba1ad7 (cdmlib): Revert back move method with entities as arguments
Cherian Mathew
05:42 PM Revision 4b242b1d (taxeditor): Correct merge
Cherian Mathew
05:11 PM Revision d637e4ba (taxeditor): Merge branch 'develop' into remoting-4.0
Conflicts:
eu.etaxonomy.taxeditor.cdmlib/.classpath
eu.etaxonomy.taxeditor.editor/plugin.xml
eu.etaxonomy.taxedito...
Cherian Mathew
03:38 PM Revision 392048d6 (taxeditor): #5188 Add special for deleting sequence
Cherian Mathew
03:38 PM Revision cd49ec22 (taxeditor): #5186 Fix erros in sequence merge and creating new specimen
Cherian Mathew
03:37 PM Revision 09c7e4e6 (cdmlib): #5188 Fix issues with deleting specimens , sequences, single reads
Cherian Mathew
12:49 PM Revision 6b630b5f (taxeditor): minor
U-BGBM\k.luther
12:35 PM Revision 98c7c2f1 (taxeditor): moving taxonnode with drag & drop as predecessor fixed
U-BGBM\k.luther
12:09 PM Revision a9afeb56 (taxeditor): #5138 Add test for normal Person load case
Cherian Mathew
11:57 AM Revision 31d3e34d (taxeditor): change preferences page for taxonnode sort
U-BGBM\k.luther
10:12 AM bug #5191 (Worksforme): TransmissionEngineDistribution stops before it is 100% done

This occurred when running the TransmissionEngineDistribution on the Cichorieae database from Rank _Genus_ to _King...
Andreas Kohlbecker
09:56 AM bug #4134: Transmissionengine Distribution seems to miss distributions for higher Taxa
Hi Norbert,
< das verstehe ich nicht ganz: OK, hat keine eigene Distribution, aber die Transmission-Engine-Distribu...
Andreas Kohlbecker
08:33 AM bug #4134 (Feedback): Transmissionengine Distribution seems to miss distributions for higher Taxa
Hallo Andreas,
das verstehe ich nicht ganz: OK, http://cichorieae.e-taxonomy.net/portal/cdm_dataportal/taxon/c34eb6...
Andreas Kohlbecker
07:57 AM Revision f5e182d4 (taxeditor): adapting transient service implementation to changes in cdmlib
- deprecated method removed Andreas Kohlbecker

09/02/2015

03:49 PM Revision 59592442 (cdmlib): adapting test to modified test data
Andreas Kohlbecker
03:27 PM Revision 7ff16b32 (cdmlib): fixing broken pager mechanism for listRankSpecificRootNodes() and improving test coverage
Andreas Kohlbecker
03:27 PM Revision 64787652 (cdmlib): removing System.out.println
Andreas Kohlbecker
03:27 PM Revision db637fb3 (cdmlib): #5177 out-commented code snipped to enable sql logging for performance debugging
Andreas Kohlbecker
03:27 PM Revision ff24ddbd (cdmlib): typo in comment
Andreas Kohlbecker
03:25 PM bug #4134 (Worksforme): Transmissionengine Distribution seems to miss distributions for higher Taxa
> wie kommt es eigentlich, dass für das Taxon "Cichorieae" die Transmission Engine Distribution nur so extrem fragmen... Andreas Kohlbecker
02:54 PM Revision 84a43ef0 (taxeditor): fixing #5150
U-BGBM\k.luther
02:52 PM feature request #5185 (Worksforme): drag & drop for descriptions and descriptionElements
Drag&Drop does not work anymore (or never worked ?). We should either fix this or completely switch of D&D functional... Katja Luther
01:49 PM Revision 281f389b (taxeditor): error handling in deleteHandler/operation of navigator
U-BGBM\k.luther
12:30 PM feature request #4896: Bulkeditor: deduplication of objects of different type
r25423 for more information why the convertion was aborted, but I think this is only a workaround. the ismergeable Me... Katja Luther
11:54 AM feature request #4896: Bulkeditor: deduplication of objects of different type
the merge of team and person are now possible with r25416 and isMergeable is called before.
Katja Luther
12:27 PM Revision 36b5f7a3 (taxeditor): better messaging when convert person to team does not work
U-BGBM\k.luther
12:02 PM Revision 73be66a0 (cdmlib): set the test to ignore, because the funcionality is not implemented yet.
Katja Luther
12:02 PM Revision b95fcee4 (cdmlib): revert the local changes
Katja Luther
12:02 PM Revision 28f177b1 (cdmlib): minor
Katja Luther
11:38 AM Revision fbd92259 (taxeditor): Implementation of AlignmentEditorPasteHandler changed.
Ben Stöver
11:34 AM Revision 812f4a8d (taxeditor): Merge branch 'develop' of https://dev.e-taxonomy.eu/git/taxeditor into actualBranch
U-BGBM\k.luther
11:33 AM Revision 95ee1b51 (taxeditor): moving more than one taxon node, merge of team and person, reusing name for new taxon
U-BGBM\k.luther
11:29 AM Revision ab9f98b3 (taxeditor): Paste action for AlignmentEditor added.
Ben Stöver
11:29 AM Revision 0e24f823 (taxeditor): Add space to message
Patrick Plitzner
11:08 AM Revision 73bc3754 (cdmlib): Enhance ABCD import report
Patrick Plitzner
11:03 AM Revision f4f5cd63 (taxeditor): #5181 Fix incorrect load of CdmServiceCacher when connecting via Datasource view
Cherian Mathew
10:48 AM Revision 30df1c38 (cdmlib): adding a convertmergeStrategy because of a different handling of merge and convert
Katja Luther
10:48 AM Revision 6ae5ca99 (cdmlib): changes for tcs import, fixing taxonnodecomparator, polytomouskey deletion and converting from person to team and team to person
Katja Luther
10:48 AM Revision 6d62d023 (cdmlib): adding a ConvertMergeStrategy
Katja Luther

09/01/2015

05:45 PM Revision 4df2d57c (taxeditor): Ignoring test until #5138 is fixed
Cherian Mathew
05:27 PM Revision 4ca1afec (taxeditor): Merge remote-tracking branch 'origin' into remoting-4.0
Conflicts:
eu.etaxonomy.taxeditor.application/META-INF/MANIFEST.MF
eu.etaxonomy.taxeditor.application/pom.xml
eu.e...
Cherian Mathew
05:23 PM Revision 5e6e427a (taxeditor): #5138 Add test for cascade error
Cherian Mathew
03:02 PM feature request #5177: improve perfomance of TransmissionEngineDistribution
b63ae2e out-commented code snipped to enable sql logging for performance debugging
Andreas Kohlbecker
01:00 PM feature request #5177: improve perfomance of TransmissionEngineDistribution
Duration of the test in TransmissionEngineDistributionTest run on my T400:
* eu.etaxonomy.cdm.api.service.Transmiss...
Andreas Kohlbecker
12:21 PM feature request #5177 (Closed): improve perfomance of TransmissionEngineDistribution
improve perfomance of TransmissionEngineDistribution
Andreas Kohlbecker
01:42 PM Revision 97fd3d96 (taxeditor): Fix NPE
Patrick Plitzner
12:08 PM bug #4134: Transmissionengine Distribution seems to miss distributions for higher Taxa
waiting for #5176 to be solved before starting with this issue.
Andreas Kohlbecker
12:07 PM feature request #5176 (Closed): TransmissionEngineDistribution can run on selected taxa
currently the TransmissionEngineDistribution can only be limited to run on a chosen Classification. So it must alway ... Andreas Kohlbecker
11:53 AM Revision 57831463 (cdmlib): Merge branch 'develop' into abcd
Patrick Plitzner
11:26 AM bug #5040 (Closed): Allow transmission engine webservice to define area level
done in dc3fd42 r25402 by adding parameters to transmission engine webservice to set targetAreaLevel, lowerRank & upp... Andreas Kohlbecker
11:25 AM Revision dc3fd428 (cdmlib): #5040 - adding parameters to transmission engine webservice to set targetAreaLevel, lowerRank & upperRank
Andreas Kohlbecker
11:17 AM Revision 48584197 (taxeditor): Avoid exception loop when taxon name is null (#4996)
Patrick Plitzner
10:24 AM Revision 7f8351e8 (taxeditor): Do not show taxon navigator menu entries when nothing is selected
Patrick Plitzner
10:23 AM Revision c514b54e (taxeditor): Trim code
Patrick Plitzner
08:24 AM Revision a6e724f8 (cdmlib): Add test for non-parsabel taxon name
Patrick Plitzner
08:24 AM Revision 94fe584f (cdmlib): Refine rank parsing
- if rank cannot be parsed the taxon will be created as is with a
single taxon node without any parent taxon node but...
Patrick Plitzner

08/31/2015

11:35 PM Revision 0eef1621 (cdm-dataportal): #5112 - documentation in the admin settings regarding the marked area filter and its effect on the distribution area hierarchy.
Andreas Kohlbecker
11:08 PM Revision f22bf4ad (cdmlib): #5112 - hiding fall back areas from the hierachchic distribution representation
Andreas Kohlbecker
03:50 PM Revision 04a445b3 (cdmlib): Add new test for name parsing
Patrick Plitzner
03:50 PM Revision a4964af7 (cdmlib): Increase reference titlecache in test DBs
Patrick Plitzner
12:09 PM feature request #5174 (Closed): web services for experts implemented
this is a prerequisite for all experts related data portal activities.
Andreas Kohlbecker
11:45 AM Revision 4b57e9fb (cdmlib): #5070 - adding missing part in init stategy for second level derivatives
Andreas Kohlbecker

08/30/2015

12:21 AM Revision 7afe1704 (cdmlib-apps): Add new sources for FotG (cont)
Andreas Müller

08/29/2015

11:55 PM Revision 3701c53f (cdmlib-apps): Add new FotG sources (3, 11, 14,15,16,20)
Andreas Müller

08/28/2015

12:38 PM Revision 37d7dfe9 (cdm-server): adding option to allow forcably updating the database schema version
Andreas Kohlbecker
12:16 PM Revision 2561020a (cdm-server): minor change in text written to log
Andreas Kohlbecker
12:13 PM feature request #5172 (New): TaxonInteraction - add ";" and space between records and change order
TaxonInteraction is currently used in the Corvids portal for "Brood parasite" and "Ectoparasite". The latter one havi... Gabriele Dröge
12:04 PM Revision bdb3dded (cdm-server): updating links to http://cybertaxonomy.eu/
Andreas Kohlbecker
11:22 AM Revision 5647aaea (cdm-server): running all cdm-webapp instances from unpackes webapplication
- the war file is unzipped by the bootloader before starting the instances Andreas Kohlbecker
11:19 AM Revision 6254fafb (cdm-server): restoring StartupQueue which was removed before
Andreas Kohlbecker

08/27/2015

06:11 PM Revision da1d3851 (taxeditor): #5009 Fix post polytomous key delete operation event handling
Cherian Mathew
06:07 PM Revision fb109faa (cdmlib): Replace load with findByUuid for delete with uuid(s) as argument.
Cherian Mathew
06:05 PM Revision 49a9d8f8 (cdm-server): #4958 - code refacoring preserverd after reverting change sets
Andreas Kohlbecker
06:03 PM Revision 3a193852 (cdm-server): new eclipse launcher
Andreas Kohlbecker
05:06 PM Revision 5eff05c8 (cdm-server): Revert "Revert "Revert "#4958 parallel starting of instances to speed up the initial start up"""
This reverts commit caccde4bf7f795adcce8e0967df6690f3ef9638e. Andreas Kohlbecker
04:30 PM Revision caccde4b (cdm-server): Revert "Revert "#4958 parallel starting of instances to speed up the initial start up""
This reverts commit eb676073dbb9cd9fad245a3fc91a7e3e604627cc. Andreas Kohlbecker
04:14 PM Revision 6c9b7962 (cdmlib): #5161 Add initListener method to CdmBase object
Cherian Mathew
04:12 PM Revision b4d31af3 (taxeditor): #5161 Initialize listeners on cdm entities before put in cache
Cherian Mathew
04:12 PM Revision 76fe3732 (taxeditor): #5161 Fix problem of new entity not refreshed
Cherian Mathew
01:33 PM bug #5163: Converting persons to team members may result in "-empty team-"
maybe we should not use a merge for convertPerson2team because the new created team should have the person as a teamm... Katja Luther
01:04 PM Revision 123de1cc (taxeditor): Merge branch 'develop' of https://dev.e-taxonomy.eu/git/taxeditor into actualBranch
U-BGBM\k.luther
01:01 PM Revision 01effd90 (taxeditor): fix #5171
U-BGBM\k.luther

08/26/2015

06:39 PM Revision 14bbe452 (taxeditor): Shared functionality moved from AlignmentEditorCopyHandler to AlignmentModelUtils in LibrAlign.
Ben Stöver
04:14 PM Revision 1afe3ed2 (taxeditor): JavaDoc extended.
Different LibrAlign model action used in AlignmentEditorCutHandler. Ben Stöver
04:07 PM Revision 65fe133d (taxeditor): Cut action for AlignmentEditor implemented.
Ben Stöver
02:55 PM Revision 0d8019de (taxeditor): Check for disposed widget
Cherian Mathew
02:55 PM Revision 1226f24c (taxeditor): #5143, #5144 Improve load performance for name editor
Cherian Mathew
02:55 PM Revision 6e2297e3 (taxeditor): Move Base operations test class to right package
Cherian Mathew
01:23 PM Revision 4bef5400 (taxeditor): Add PDE runtime environment to target platform (provides Plug-In Spy)
Patrick Plitzner
01:13 PM Revision 1878ece9 (taxeditor): Shared clipboard added to AlignmentEditor. (Should be moved to a global EDITor class in the future.)
Ben Stöver
12:36 PM Revision 1400c5b2 (cdmlib): add @Audited to startNumber
U-BGBM\k.luther
12:30 PM Revision 48f67449 (taxeditor): Merge branch 'develop' of https://dev.e-taxonomy.eu/git/taxeditor into actualBranch
U-BGBM\k.luther
12:29 PM Revision e82bceda (taxeditor): close the polytomouskey-editor if the key is deleted
U-BGBM\k.luther
11:52 AM Revision 4e400041 (taxeditor): AbstractFocusedAlignmentAreaHandler added.
Ben Stöver
11:03 AM Revision 317a1bcb (taxeditor): Merge branch 'develop' into remoting-4.0
Conflicts:
eu.etaxonomy.taxeditor.bulkeditor/src/main/java/eu/etaxonomy/taxeditor/bulkeditor/input/AgentEditorInput....
Cherian Mathew
08:15 AM Revision 02679036 (taxeditor): Disable MediaView for bulk editor (#5162)
- bulk editor does only activate media view when showing taxa
- code trimming
Patrick Plitzner

08/25/2015

08:32 PM Revision 4ec9f3b6 (taxeditor): Some general methods moved from AlignmentEditor to SWTUtils in bioinfweb.commons.
Ben Stöver
08:13 PM Revision 479060ec (taxeditor): AlignmentEditorCopyHandler now sets current action status.
Ben Stöver
05:42 PM Revision 94d3e32a (taxeditor): Move property tester to editor plugin
Patrick Plitzner
05:38 PM Revision a0f46df5 (taxeditor): AlignmentEditorCopyHandler now offers copying functionality as a static method.
Copying not performed, if no nucleotides are selected. Ben Stöver
05:28 PM Revision c0e388f7 (taxeditor): Moved functionality to be shared from AlignmentEditorCopyHandler to AlignmentEditor.
AlignmentEditorCopyHandler refactored. Ben Stöver
05:17 PM Revision afa09948 (taxeditor): Initial implementation of AlignmentCopyHandler finished.
Minor changes. Ben Stöver
05:10 PM Revision acb315d9 (taxeditor): Replace deprecated method
Patrick Plitzner
03:04 PM Revision 7929348c (taxeditor): Add Copy functionality to AlignmentEditor
Patrick Plitzner
01:56 PM Revision 4293f24c (cdmlib): changes for deleting polytomous key nodes
U-BGBM\k.luther
01:52 PM Revision 8bd9a808 (taxeditor): Merge branch 'develop' into LibrAlign
Patrick Plitzner
01:40 PM bug #5163: Converting persons to team members may result in "-empty team-"
in the merge strategy the adding of the person(s) to the new created team is missing.
we need:
* parsing the title ...
Katja Luther
01:28 PM Revision 0bb254ee (taxeditor): #5160 Use new merge method with ids as arguments
Conflicts:
eu.etaxonomy.taxeditor.bulkeditor/src/main/java/eu/etaxonomy/taxeditor/bulkeditor/input/AgentEditorInput....
Cherian Mathew
01:09 PM Revision 3a8e076a (taxeditor): #5160 Use new merge method with ids as arguments
Cherian Mathew
01:03 PM Revision 0d5ac546 (cdmlib): #5160 Add new merge method with id's as arguments
Cherian Mathew
12:52 PM bug #5159: Polytomous key list view needs right click enabling
this seems to be a problem only on windows. on cherians machine the selection also changes with a right-click. if we ... Katja Luther
10:21 AM Revision 4d36bf6f (taxeditor): Merge branch 'develop' of ssh://dev.e-taxonomy.eu/var/git/taxeditor into develop
Patrick Plitzner
10:18 AM Revision 6f727089 (taxeditor): fix #5153
U-BGBM\k.luther
09:50 AM Revision 97c86758 (taxeditor): fix #5153
U-BGBM\k.luther
08:36 AM Revision 221a1f2e (taxeditor): Externalize Strings
Patrick Plitzner
08:22 AM Revision 75ebabd0 (taxeditor): Merge develop into branch
Patrick Plitzner
08:15 AM Revision 59aac23b (taxeditor): Change order of controls
Patrick Plitzner
08:06 AM Revision b13d085b (taxeditor): Use web icon for URL button
Patrick Plitzner
08:06 AM Revision 98fbf545 (taxeditor): Create constant for default column number in detail sections
Patrick Plitzner
08:05 AM Revision 1fbf88c8 (taxeditor): Split up control creation of TextWithLabelElement
- this fixes layout problems when inserting a separate button for
opening links
Patrick Plitzner

08/24/2015

07:44 PM Revision 1fd12570 (taxeditor): Trim code
Patrick Plitzner
07:43 PM Revision e96340a6 (taxeditor): Remove equal width from columns
Patrick Plitzner
06:57 PM Revision 09152959 (taxeditor): Test implementation of Copy action added to AlignmentEditor.
Ben Stöver
05:17 PM Revision da3cc7e3 (taxeditor): Correct properties file load and server info test
Cherian Mathew
02:33 PM Revision c69c2dcd (taxeditor): Add entity type to CdmChangeEvent and fixes #5139
Cherian Mathew
01:02 PM Revision 2743a292 (taxeditor): Externalize strings
Patrick Plitzner
11:58 AM Revision 15a62a24 (taxeditor): #4073 Initial implementation of local cdm-server
Cherian Mathew
11:34 AM Revision 7d7c5562 (taxeditor): Merge branch 'develop' into remoting-4.0
Conflicts:
eu.etaxonomy.taxeditor.editor/src/main/java/eu/etaxonomy/taxeditor/editor/view/dataimport/transientServic...
Cherian Mathew
11:11 AM Revision 6560d987 (taxeditor): Warn user that URL will not be saved in bold and red (#5065, #5141)
Patrick Plitzner
10:44 AM Revision c5273839 (taxeditor): Add OS and java info to MessagingUtils stacktrace
Patrick Plitzner
10:43 AM Revision c269a745 (taxeditor): Change order parameters in DetailsView for sources (#5133)
Patrick Plitzner
10:39 AM Revision c8938223 (taxeditor): Support UUID search in bulk editors (#5103)
Patrick Plitzner
10:39 AM Revision caddd4f3 (taxeditor): Trim code
Patrick Plitzner
10:39 AM Revision 3c258b8a (taxeditor): Remove comments
Patrick Plitzner
10:39 AM Revision 9e0f8df5 (taxeditor): Handle ampersand correctly in section titles (#5142)
Patrick Plitzner
10:35 AM Revision 4219586b (taxeditor): Fix application ID
Patrick Plitzner

08/21/2015

08:58 PM bug #5163 (Closed): Converting persons to team members may result in "-empty team-"
A tried to convert a person to a team, but there was no member added to the team and the title cache is only "-empty ... Andreas Müller
05:36 PM bug #5104: prevent MarkerTypes from being deleted when there are Marker entities using that type
This should be handled for ALL term types, not only marker types.
I wonder why hibernate is not aware of the term b...
Andreas Müller
03:37 PM bug #5159 (New): Polytomous key list view needs right click enabling
Right click on the PK list does not enable the underlying PK but it should (and it does e.g. in the Taxon Navigator f... Andreas Müller
10:50 AM Revision 4d5d904c (cdmlib-apps): Add annual CoL source
Andreas Müller
10:48 AM Revision e7c60aae (cdmlib): minor
Andreas Müller
10:15 AM Revision 2a0f3d06 (taxeditor): #4717 Correct java exec called for macosx
Cherian Mathew
08:46 AM Revision 42a0c5ab (taxeditor): #4717 Correct macosx dir structure
Cherian Mathew

08/20/2015

08:54 PM Revision 15a394a5 (cdmlib): Adapt rank split for CoL to higher>species
Andreas Müller
08:47 PM Revision 73406d40 (cdmlib-apps): Adapt CoL import Activator to latest changes
Andreas Müller
08:47 PM Revision 2271bdb0 (cdmlib-apps): Adapt BM datasources to new SQL Server
Andreas Müller
06:59 PM Revision 47def4dd (taxeditor): #4717 Correct macosx java path
Cherian Mathew
06:27 PM Revision 5fce47c0 (taxeditor): #4717 Correct dir relative path to java exec for mac osx
Cherian Mathew
05:52 PM Revision 5a7b73b8 (taxeditor): #4717 Correct dir for changing permissions
Cherian Mathew
05:48 PM Revision 07598008 (taxeditor): #4717 Add seperate product file for jre bundle
Cherian Mathew
05:08 PM Revision 11adbf4d (cdmlib): Fix CoL import (taxon relationship split)
Andreas Müller
12:55 PM Revision 4b0488d0 (taxeditor): fix for #5114
U-BGBM\k.luther
10:37 AM Revision 757b1a9f (taxeditor): fix #5153
U-BGBM\k.luther

08/19/2015

08:44 AM Revision 93276717 (cdmlib): Enhance ignored import due to already existing specimens
Patrick Plitzner

08/18/2015

04:17 PM Revision 99d52dfc (taxeditor): Merge branch 'hotfix/3.7.1'
jenkins
04:14 PM Revision 02d55e51 (taxeditor): updating poms for branch'hotfix/3.7.1' with non-snapshot versions
jenkins
04:13 PM Revision 0ae514f3 (taxeditor): Revert project versions to 3.7.1-SNAPSHOT
jenkins
04:12 PM Revision ba3a1a0f (taxeditor): Updated version in pom / project files to taxeditor version : 3.7.1 and cdmlib version :
jenkins
04:11 PM Revision d03c44e0 (taxeditor): changes for move descriptions and description elements
U-BGBM\k.luther
04:10 PM Revision 83819bfb (taxeditor): Updated version in pom / project files to taxeditor version : 3.7.1-SNAPSHOT and cdmlib version :
jenkins
04:09 PM Revision 77202a8d (taxeditor): updating poms for 3.7.1 branch with snapshot versions
jenkins
02:56 PM Revision b7c9ffee (taxeditor): Merge branch 'develop' into LibrAlign
Patrick Plitzner
02:45 PM Revision 6950e783 (taxeditor): Merge branch 'develop' of ssh://dev.e-taxonomy.eu/var/git/taxeditor into develop
U-BGBM\k.luther
02:26 PM Revision e8f9b86d (taxeditor): small changes for ideas for better drag and drop in taxonnavigator
U-BGBM\k.luther
02:09 PM Revision 8f6ecf94 (taxeditor): white spaces
U-BGBM\k.luther
01:47 PM Revision 40243bd5 (taxeditor): Correct config for molecular plugin
Cherian Mathew
01:40 PM Revision 69373790 (taxeditor): changes for move descriptions and description elements
U-BGBM\k.luther
01:35 PM Revision ab499326 (taxeditor): minor
Katja Luther
07:51 AM Revision 926fd5b3 (taxeditor): Remove comments
Patrick Plitzner

08/17/2015

06:00 PM Revision 3650a540 (cdmlib): Check capabilites of BioCase provider for supported ABCD schemas
Patrick Plitzner
02:56 PM Revision 7f0642d4 (taxeditor): Rename Derivative View to Derivative Editor
Patrick Plitzner
01:29 PM bug #5149: Remove UNIQUE index on Sequence_Reference.citations_id column
citations was @OneToMany before refactoring the molecular package. Seems like I forgot to add the remove index comma... Andreas Müller
11:39 AM bug #5149 (Closed): Remove UNIQUE index on Sequence_Reference.citations_id column
Summary was: "some Sequence_Reference tables have UNIQUE index on citations_id column"
I already deleted this on...
Patrick Plitzner
12:59 PM Revision 3141e8b0 (taxeditor): Minor changes.
Ben Stöver
12:56 PM Revision f2218c81 (taxeditor): Fixed NPE when loading single reads without attached pherogram.
Ben Stöver
12:52 PM Revision 1bb3e750 (taxeditor): test commit
Patrick Plitzner
10:38 AM Revision 5d4927e5 (taxeditor): Added missing molecular plugin projects
Patrick Plitzner
10:19 AM Revision af5377be (taxeditor): white space changes
Patrick Plitzner
09:38 AM Revision 1d767e3d (taxeditor): Renamed branch
Patrick Plitzner
 

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