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From 06/09/2015 to 07/08/2015

07/08/2015

08:31 PM Revision d37eb206 (taxeditor): Make cell text in ReferencingObjectsView selectable
Patrick Plitzner
08:31 PM Revision 24761 (edit-svn): Make cell text in ReferencingObjectsView selectable
Patrick Plitzner
08:27 PM Revision 24760 (edit-svn): Remove comments
Patrick Plitzner
08:27 PM Revision 7197e862 (taxeditor): Remove comments
Patrick Plitzner
07:44 PM Revision 33e35091 (cdmlib): Merge branch 'master' into abcd
Patrick Plitzner
04:17 PM feature request #3994: Select widget to choose the filter areas for the advanced search
ist womöglich noch/schon auf Eurer Agenda (da wir die Diskussion bereits vor ein paar Wochen hatten), aber für Zypern... Andreas Müller
08:49 AM feature request #3994: Select widget to choose the filter areas for the advanced search
Replying to [[comment16|a.kohlbecker]]:
> Replying to [[comment15|n.kilian]]:
>
> > (1) I see a problem for users...
Norbert Kilian
02:50 PM Revision 24759 (edit-svn): merge-update from trunk
Patrick Plitzner
02:50 PM Revision 28f22082 (taxeditor): merge-update from trunk
Patrick Plitzner
02:44 PM Revision 24757 (edit-svn): Catch exception instead of throwing them
Lets the methods return Patrick Plitzner
02:44 PM Revision 9f054d7a (cdmlib): Catch exception instead of throwing them
Lets the methods return Patrick Plitzner
02:44 PM Revision 24758 (edit-svn): Catch exception instead of throwing them
Lets the methods return Patrick Plitzner
02:44 PM Revision 01122d8b (cdmlib): Catch exception instead of throwing them
Lets the methods return Patrick Plitzner
02:24 PM Revision a74084cb (cdmlib): Error loggind during import
Patrick Plitzner
02:24 PM Revision 24756 (edit-svn): Error loggind during import
Patrick Plitzner
01:09 PM Revision 24754 (edit-svn): Merge branch 'master' into abcd
Patrick Plitzner
01:09 PM Revision 25fca88c (cdmlib): Merge branch 'master' into abcd
Patrick Plitzner
01:09 PM Revision 24755 (edit-svn): Branch '/trunk/cdmlib' replaced from /branches/cdmlib/abcd:24754
Patrick Plitzner
12:38 PM Revision 9f8447a6 (cdmlib): minor
Katja Luther
12:38 PM Revision 24753 (edit-svn): Add <IDENTIFIER> to clear DB script
Patrick Plitzner
12:38 PM Revision 24752 (edit-svn): minor
Katja Luther
11:38 AM Revision 63dd948f (cdmlib): Add <IDENTIFIER> to clear DB script
Patrick Plitzner
11:22 AM Revision bda7e646 (cdmlib): Clear Terms before starting test
Patrick Plitzner
11:22 AM Revision 24751 (edit-svn): Clear Terms before starting test
Patrick Plitzner
10:26 AM Revision 20b4ac50 (cdmlib): Remove countries and areas to avoid test failure
Patrick Plitzner
10:26 AM Revision 24750 (edit-svn): Remove countries and areas to avoid test failure
Patrick Plitzner
09:40 AM Revision 19b24dc9 (cdmlib): Add exception during import to report
Patrick Plitzner
09:40 AM Revision 24748 (edit-svn): Add exception during import to report
Patrick Plitzner
09:40 AM Revision 24749 (edit-svn): Branch '/trunk/cdmlib' replaced from /branches/cdmlib/abcd:24748
Patrick Plitzner
07:41 AM Revision 24746 (edit-svn): Externalize cdmViewer extension point parsing
Patrick Plitzner
07:41 AM Revision 24747 (edit-svn): Fix classification handling for new and exisiting taxa
Patrick Plitzner
07:41 AM Revision b933f37d (taxeditor): Externalize cdmViewer extension point parsing
Patrick Plitzner
07:34 AM Revision 33262f8c (cdmlib): Fix classification handling for new and exisiting taxa
Patrick Plitzner

07/07/2015

05:20 PM Revision 8623af42 (cdmlib): Add new test for classification handling
Patrick Plitzner
05:20 PM Revision 24745 (edit-svn): Add new test for classification handling
Patrick Plitzner
05:19 PM Revision 24744 (edit-svn): Exception handling
- moved report printing to finally clause to always have a report.
- fixed possible NPE
Patrick Plitzner
05:19 PM Revision 50103603 (cdmlib): Exception handling
- moved report printing to finally clause to always have a report.
- fixed possible NPE
Patrick Plitzner
04:58 PM Revision 243636c2 (taxeditor): Refactor ICdmViewer framework
Removed unnecessary ExecutionEvent Patrick Plitzner
04:58 PM Revision 24742 (edit-svn): Refactor ICdmViewer framework
Removed unnecessary ExecutionEvent Patrick Plitzner
04:58 PM Revision 0d17e9e1 (taxeditor): Add generic context menu for ICdmViewer framework
Patrick Plitzner
04:58 PM Revision 24743 (edit-svn): Add generic context menu for ICdmViewer framework
Patrick Plitzner
04:02 PM Revision 24741 (edit-svn): Merge branch 'master' into abcd
Patrick Plitzner
04:02 PM Revision bb9a8adf (cdmlib): Merge branch 'master' into abcd
Patrick Plitzner
03:38 PM Revision 6f2de612 (cdmlib): Test classification handling
Patrick Plitzner
03:38 PM Revision 24740 (edit-svn): Test classification handling
Patrick Plitzner
03:37 PM Revision 24739 (edit-svn): Handle default classification in state object
Patrick Plitzner
03:37 PM Revision 1d413cc8 (cdmlib): Handle default classification in state object
Patrick Plitzner
03:31 PM feature request #3994: Select widget to choose the filter areas for the advanced search
Replying to [[comment15|n.kilian]]:
> (1) I see a problem for users with the two lists of WaterbodyOrCountry and TD...
Andreas Kohlbecker
02:02 PM feature request #3994: Select widget to choose the filter areas for the advanced search
Firefox: I tested the checklist function (taxon = *) as well assearch with genus name for several TDWG units with the... Norbert Kilian
01:09 PM feature request #3994: Select widget to choose the filter areas for the advanced search
Problems with the widget have been reported for the Internet Explorer
"_Anmerkung zum Portal im Internet Explorer: ...
Andreas Kohlbecker
03:05 PM Revision 7995f18c (taxeditor): Revert incorrect fix (r24331) for taxon titleCache #5018
Andreas Müller
03:05 PM Revision 24738 (edit-svn): Revert incorrect fix (r24331) for taxon titleCache #5018
Andreas Müller
02:57 PM Revision 24737 (edit-svn): Fix conversion of ShiftChanges to Shifts
Patrick Plitzner
02:57 PM Revision 483b8b8a (taxeditor): Fix conversion of ShiftChanges to Shifts
Patrick Plitzner
02:54 PM feature request #5071 (New): distribution filter widget - remove button to unselect areas
The advanced search offer a widget to choose distribution areas as filter criterion. It is too complicated to remove ... Andreas Kohlbecker
02:53 PM Revision c83c2349 (cdmlib): Fix missing protected evaluation for Taxon titleCache #5018
Andreas Müller
02:53 PM Revision 24736 (edit-svn): Fix missing protected evaluation for Taxon titleCache #5018
Andreas Müller
02:13 PM Revision 24735 (edit-svn): Make editor transient term service compatible with cdmlib term service
Cherian Mathew
02:13 PM Revision 4bf80c89 (taxeditor): Make editor transient term service compatible with cdmlib term ser...
Cherian Mathew
02:11 PM Revision 24734 (edit-svn): Use UUIDs instead of CDM objects in AlignmentEditorInput
This avoids session conflicts because the object will be loaded into the correct session when processing the editor i... Patrick Plitzner
02:11 PM Revision a72d93a2 (taxeditor): Use UUIDs instead of CDM objects in AlignmentEditorInput
This avoids session conflicts because the object will be loaded into the correct session when processing the editor i... Patrick Plitzner
02:10 PM Revision d984b9fb (cdmlib): #5054 Add delete method call with uuid
Cherian Mathew
02:10 PM Revision 24733 (edit-svn): #5054 Add delete method call with uuid
Cherian Mathew
02:02 PM Revision bd44d546 (taxeditor): #5067 Add remoting session to derivate search view
Cherian Mathew
01:53 PM Revision 596a7252 (taxeditor): Re-load sequence to avoid session conflicts.
Patrick Plitzner
01:53 PM Revision 24732 (edit-svn): Re-load sequence to avoid session conflicts.
Patrick Plitzner
12:55 PM Revision 3c2b35c5 (taxeditor): #5054 Add save to make sure term is refreshed
Cherian Mathew
12:55 PM Revision 24731 (edit-svn): #5054 Add save to make sure term is refreshed
Cherian Mathew
11:23 AM Revision f4e49b08 (taxeditor): #5054 Update test for checking terms update
Cherian Mathew
11:23 AM Revision 24730 (edit-svn): #5054 Update test for checking terms update
Cherian Mathew
11:11 AM Revision 24728 (edit-svn): #5066 Replace cdmlib persistence hibernate events listener with pre-[i...
Cherian Mathew
11:11 AM Revision 24729 (edit-svn): #5054 Update Term Editor to be remoting compatible
Cherian Mathew
11:11 AM Revision 90070603 (cdmlib): #5066 Replace cdmlib persistence hibernate events listener with pre-[...
Cherian Mathew
09:18 AM Revision 24727 (edit-svn): Stash updated for bkp
Cherian Mathew
09:18 AM Revision 0a545670 (cdmlib): Add tests for classification handling
Patrick Plitzner
09:18 AM Revision 24726 (edit-svn): Add tests for classification handling
Patrick Plitzner
09:18 AM Revision 07692ea3 (cdmlib): Fix classification handling in ABCD import
Patrick Plitzner
09:18 AM Revision 24725 (edit-svn): Fix classification handling in ABCD import
Patrick Plitzner
07:44 AM Revision b679c9a5 (cdmlib): Check ignoreAuthorship flag with different authors in test data
Patrick Plitzner
07:44 AM Revision 24724 (edit-svn): Check ignoreAuthorship flag with different authors in test data
Patrick Plitzner

07/06/2015

08:56 PM Revision 24722 (edit-svn): cacheUpdater Caryophyllales
Katja Luther
08:56 PM Revision 24723 (edit-svn): Remove unneccessary check
Patrick Plitzner
08:56 PM Revision 6bcf4c7f (cdmlib-apps): cacheUpdater Caryophyllales
Katja Luther
08:54 PM Revision ff722416 (cdmlib): minor
Katja Luther
08:54 PM Revision 24721 (edit-svn): minor
Katja Luther
06:34 PM Revision 7a4d764d (cdmlib): cacheUpdater Caryophyllales
Katja Luther
06:34 PM Revision 24720 (edit-svn): cacheUpdater Caryophyllales
Katja Luther
05:48 PM Revision c239e0b3 (cdmlib): cacheUpdater for caryophyllales
Katja Luther
05:48 PM Revision 24719 (edit-svn): cacheUpdater for caryophyllales
Katja Luther
05:17 PM Revision 24718 (edit-svn): restoring white space which was lost due to an edit before.
Andreas Kohlbecker
05:17 PM Revision 09ded97c (cdm-dataportal): restoring white space which was lost due to an edit before.
Andreas Kohlbecker
05:14 PM Revision 7011a46f (cdm-dataportal): adapting test to changes which must have happened in cdmlib
Cannot really reconstruct but the data shown in portal looks ok. More foonotes are magically shown. This must be a si... Andreas Kohlbecker
05:14 PM Revision 24717 (edit-svn): adapting test to changes which must have happened in cdmlib
Cannot really reconstruct but the data shown in portal looks ok. More foonotes are magically shown. This must be a si... Andreas Kohlbecker
04:51 PM Revision a38682a7 (cdmlib): Stash updated for bkp
Cherian Mathew
03:59 PM bug #5063: Fix CoL import (split in parts++)
Some first implementation handling DB based mapping and configurator for splitted import (not yet ready): [24713:24714]
Andreas Müller
03:51 PM bug #5063 (Closed): Fix CoL import (split in parts++)
Currently the import is failing to import the hierarchy. Also performance is very bad, so we may want to improve the ... Andreas Müller
03:59 PM Revision e5c282bc (cdmlib): Remove unneccessary check
Patrick Plitzner
03:49 PM Revision 24716 (edit-svn): Log exceptions during import in the report file
Patrick Plitzner
03:49 PM Revision d823746c (cdmlib): Log exceptions during import in the report file
Patrick Plitzner
03:46 PM Revision 24714 (edit-svn): Adapt ColDwcaImportActivator to latest import changes
Andreas Müller
03:46 PM Revision 24715 (edit-svn): Extend tests for GGBN import.
Checking field unit data. Patrick Plitzner
03:46 PM Revision 72f1cc5a (cdmlib-apps): Adapt ColDwcaImportActivator to latest import changes
Andreas Müller
03:45 PM Revision 24713 (edit-svn): Improve DwC-A import for large datasets
Andreas Müller
03:45 PM Revision 9236bfec (cdmlib): Improve DwC-A import for large datasets
Andreas Müller
03:11 PM Revision 24712 (edit-svn): Display URI parsing errors
Patrick Plitzner
03:11 PM Revision 3156d799 (taxeditor): Display URI parsing errors
Patrick Plitzner
03:10 PM Revision 9f089935 (taxeditor): Remove comments
Patrick Plitzner
03:10 PM Revision 24711 (edit-svn): Remove comments
Patrick Plitzner
03:10 PM Revision 24710 (edit-svn): now really cleaning the target folder for selenium tests run via the h...
- this avoids accumulation of screnshots as jenkins artifacts Andreas Kohlbecker
03:10 PM Revision d68a10c6 (cdm-dataportal): now really cleaning the target folder for selenium tests run ...
- this avoids accumulation of screnshots as jenkins artifacts Andreas Kohlbecker
03:01 PM Revision 24709 (edit-svn): cleaning the target folder for selenium tests run by maven
- this avoids accumulation of screnshots as jenkins artifacts Andreas Kohlbecker
03:01 PM Revision 7b15b2e1 (cdm-dataportal): cleaning the target folder for selenium tests run by maven
- this avoids accumulation of screnshots as jenkins artifacts Andreas Kohlbecker
01:39 PM Revision d3746fc4 (cdmlib): Extend tests for GGBN import.
Checking field unit data. Patrick Plitzner
11:21 AM Revision 2b771a30 (cdm-dataportal): fixing layout issue with extra whitespace added by distributi...
Andreas Kohlbecker
11:21 AM Revision 24708 (edit-svn): fixing layout issue with extra whitespace added by distributions status
Andreas Kohlbecker
10:25 AM Revision 24707 (edit-svn): Adapt to changed 'save' call in services layer
Cherian Mathew
10:25 AM Revision 881919d2 (cdm-vaadin): Adapt to changed 'save' call in services layer
Cherian Mathew
10:04 AM Revision 24706 (edit-svn): Merge branch 'master' into abcd
Patrick Plitzner
10:04 AM Revision ff2ef28d (cdmlib): Merge branch 'master' into abcd
Patrick Plitzner

07/05/2015

10:55 PM Revision 24705 (edit-svn): Adjustments to recent module changes in bioinfweb.commons.
Ben Stöver
10:55 PM Revision c2daa6e9 (taxeditor): Adjustments to recent module changes in bioinfweb.commons.
Ben Stöver

07/04/2015

02:21 AM Revision 91593c59 (cdmlib-apps): minor
Katja Luther
02:21 AM Revision 24704 (edit-svn): minor
Katja Luther
02:06 AM Revision 24703 (edit-svn): minor
Katja Luther
02:06 AM Revision 26868685 (cdmlib): minor
Katja Luther

07/03/2015

10:29 PM Revision 24702 (edit-svn): Caryophyllales stuff
Katja Luther
10:29 PM Revision 6ebbd650 (cdmlib): Caryophyllales stuff
Katja Luther
10:10 PM Revision 24701 (edit-svn): Caryophyllales stuff
Katja Luther
10:10 PM Revision 29f605f3 (cdmlib-apps): Caryophyllales stuff
Katja Luther
06:25 PM Revision 1175f901 (taxeditor): #5054 Update Term Editor to be remoting compatible
Cherian Mathew
04:26 PM Revision b4a380dc (taxeditor): AlignmentEditor.createTestContents() marked as deprecated.
Ben Stöver
04:26 PM Revision 24700 (edit-svn): AlignmentEditor.createTestContents() marked as deprecated.
Ben Stöver
01:23 PM Revision 24699 (edit-svn): Try to fix compile/merge error
Andreas Müller
01:23 PM Revision b5df9df2 (cdmlib-apps): Try to fix compile/merge error
Andreas Müller
01:21 PM Revision 24698 (edit-svn): Fix compiling error
Andreas Müller
01:21 PM Revision d182b05e (cdmlib-apps): Fix compiling error
Andreas Müller
01:16 PM Revision 24697 (edit-svn): Merge remote-tracking branch 'origin/master'
Conflicts:
cdm-pesi/src/main/java/eu/etaxonomy/cdm/io/pesi/faunaEuropaea/FaunaEuropaeaDistributionImport.java
Andreas Müller
01:16 PM Revision c5a20308 (cdmlib-apps): Merge remote-tracking branch 'origin/master'
Conflicts:
cdm-pesi/src/main/java/eu/etaxonomy/cdm/io/pesi/faunaEuropaea/FaunaEuropaeaDistributionImport.java
Andreas Müller
01:08 PM Revision f84594b1 (cdmlib-apps): Clean FE Distribution Import
Andreas Müller
01:08 PM Revision 24696 (edit-svn): Clean FE Distribution Import
Andreas Müller
01:02 PM Revision 194e3888 (cdmlib-apps): Adapt FEimport to new save return type.
Andreas Müller
01:02 PM Revision 24695 (edit-svn): Adapt FEimport to new save return type.
Andreas Müller
12:56 PM Revision 24694 (edit-svn): Adapt FEimport to new save return type.
Andreas Müller
12:56 PM Revision cc12702e (cdmlib-apps): Adapt FEimport to new save return type.
Andreas Müller
12:52 PM Revision 24693 (edit-svn): Allow to split DwCA imports in parts (first steps)
Andreas Müller
12:52 PM Revision 53eff720 (cdmlib): Allow to split DwCA imports in parts (first steps)
Andreas Müller
12:48 PM Revision 6546f8b2 (cdmlib-apps): Split Col Activator in parts
Andreas Müller
12:48 PM Revision 24692 (edit-svn): Split Col Activator in parts
Andreas Müller
12:48 PM Revision 6f9a99a3 (cdmlib-apps): Add new destinations
Andreas Müller
12:48 PM Revision 24691 (edit-svn): Add new destinations
Andreas Müller
12:28 PM Revision 24690 (edit-svn): InternalError thrown, if a single read alignment shall be saved that c...
Ben Stöver
12:28 PM Revision 24adf92d (taxeditor): InternalError thrown, if a single read alignment shall be saved th...
Ben Stöver
12:20 PM Revision eaa4e421 (taxeditor): Error message added, if a pherogram URL loaded from CDM cannot be ...
Ben Stöver
12:20 PM Revision 24689 (edit-svn): Error message added, if a pherogram URL loaded from CDM cannot be proc...
Ben Stöver
12:09 PM Revision 85cfbf6f (taxeditor): Merge branch 'develop' of wp5.e-taxonomy.eu:/var/git/taxeditor int...
Conflicts:
eu.etaxonomy.taxeditor.editor/src/main/java/eu/etaxonomy/taxeditor/editor/TaxonEditorInput.java
Cherian Mathew
12:09 PM Revision 24688 (edit-svn): Merge branch 'develop' of wp5.e-taxonomy.eu:/var/git/taxeditor into re...
Conflicts:
eu.etaxonomy.taxeditor.editor/src/main/java/eu/etaxonomy/taxeditor/editor/TaxonEditorInput.java
Cherian Mathew
12:09 PM Revision 24687 (edit-svn): #5054 Integrate remoting session in Term Editor
This commit also fixes a loading bug in the CdmServiceCacher, adds a test for creating term vocabulary and adapts to ... Cherian Mathew
12:09 PM Revision eacfe31f (taxeditor): Fixed NPE, if a single read has a pherogram object without URI.
Ben Stöver
12:09 PM Revision 24686 (edit-svn): Fixed NPE, if a single read has a pherogram object without URI.
Ben Stöver
12:04 PM Revision 2c5de69d (taxeditor): #5056 Adapt editor to service layer 'save' method refactoring in c...
Cherian Mathew
12:04 PM Revision 24685 (edit-svn): #5056 Adapt editor to service layer 'save' method refactoring in cdmlib
Cherian Mathew
12:01 PM Revision 24684 (edit-svn): #5056 Refactored 'save' call to return saved entity
Cherian Mathew
12:01 PM Revision 26b857a9 (cdmlib): #5056 Refactored 'save' call to return saved entity
Cherian Mathew
11:44 AM Revision bb1997d0 (taxeditor): #5054 Integrate remoting session in Term Editor
This commit also fixes a loading bug in the CdmServiceCacher, adds a test for creating term vocabulary and adapts to ... Cherian Mathew

07/02/2015

03:57 PM Revision 24683 (edit-svn): Improve BfnXmlImportActivator
Andreas Müller
03:57 PM Revision 5060cf7d (cdmlib-apps): Improve BfnXmlImportActivator
Andreas Müller
03:51 PM Revision 24682 (edit-svn): New or changed destination
Andreas Müller
03:51 PM Revision b5e25778 (cdmlib-apps): New or changed destination
Andreas Müller
01:15 PM feature request #5055 (Closed): Integrate Luna installation instruction into standard installatio...
Standard instruction for installing the Editor Deverloper environment can be found at http://cybertaxonomy.eu/taxedit... Andreas Müller
01:11 PM Revision 24679 (edit-svn): Change redlist local logins
Andreas Müller
01:11 PM Revision 24680 (edit-svn): Add rl_animalis datasource
Andreas Müller
01:11 PM Revision 24681 (edit-svn): latest changes to BfN Import
Andreas Müller
01:11 PM Revision 1f2cc436 (taxeditor): Adjustments to recent changes in LibrAlign.
(The additional project https://secure.bioinfweb.info/Code/svn/LibrAlign / trunk / main / info.bioinfweb.libralign.bi... Ben Stöver
01:11 PM Revision 24675 (edit-svn): Adjustments to recent changes in LibrAlign.
(The additional project https://secure.bioinfweb.info/Code/svn/LibrAlign / trunk / main / info.bioinfweb.libralign.bi... Ben Stöver
01:11 PM Revision 24677 (edit-svn): Remove local diptera db from destinations
Andreas Müller
01:11 PM Revision 24676 (edit-svn): Minor improve E+M import
Andreas Müller
01:11 PM Revision 24678 (edit-svn): Add redlist animalia datasource
Andreas Müller
11:39 AM Revision 487e442c (taxeditor): Merge branch 'develop' of wp5.e-taxonomy.eu:/var/git/taxeditor int...
Conflicts:
eu.etaxonomy.taxeditor.editor/src/main/java/eu/etaxonomy/taxeditor/editor/view/dataimport/transientServic...
Cherian Mathew
11:39 AM Revision 24674 (edit-svn): Merge branch 'develop' of wp5.e-taxonomy.eu:/var/git/taxeditor into re...
Conflicts:
eu.etaxonomy.taxeditor.editor/src/main/java/eu/etaxonomy/taxeditor/editor/view/dataimport/transientServic...
Cherian Mathew
11:21 AM Revision 24673 (edit-svn): Make editor compatible with latest cdmlib service layer updates
Cherian Mathew
11:21 AM Revision 3c4d1aba (taxeditor): Make editor compatible with latest cdmlib service layer updates
Cherian Mathew
11:01 AM Revision 233a8fe2 (taxeditor): #5012 Adding remoting session and updating save methods for Bulk E...
Replace properties file with xml file
#5012 updates for making Bulk Editor remoting capable
Cherian Mathew
11:01 AM Revision 24672 (edit-svn): #5012 Adding remoting session and updating save methods for Bulk Editor
Replace properties file with xml file
#5012 updates for making Bulk Editor remoting capable
Cherian Mathew
10:58 AM Revision 24671 (edit-svn): Add check to display statistice only when cache is alive
Cherian Mathew
10:58 AM Revision 24670 (edit-svn): #5012 Add service layer updates for remoting calls from the Bulk Editor
Cherian Mathew
10:58 AM Revision ddf0581b (cdmlib): #5012 Add service layer updates for remoting calls from the Bulk Editor
Cherian Mathew
10:16 AM Revision 24669 (edit-svn): removed named areas to avoid test failure
Patrick Plitzner
10:16 AM Revision 21938046 (cdmlib): removed named areas to avoid test failure
Patrick Plitzner
09:50 AM Revision 578ebc1e (cdmlib): Reset prefix after importing associated units
Patrick Plitzner
09:50 AM Revision 24668 (edit-svn): Add test for importing two dna units with associated units
Patrick Plitzner
09:50 AM Revision 9950252b (cdmlib): Add test for importing two dna units with associated units
Patrick Plitzner
09:50 AM Revision 32512895 (cdmlib): Do not close system.out
Patrick Plitzner
09:50 AM Revision 24667 (edit-svn): Reset prefix after importing associated units
Patrick Plitzner
09:50 AM Revision 24666 (edit-svn): Do not close system.out
Patrick Plitzner
09:49 AM Revision 3494aea3 (cdmlib): Add test for importing two dna units with associated units
Patrick Plitzner
09:49 AM Revision 24665 (edit-svn): Add test for importing two dna units with associated units
Patrick Plitzner
09:47 AM Revision 24664 (edit-svn): Reset prefix after importing associated units
Patrick Plitzner
09:47 AM Revision 1b4d595b (cdmlib): Reset prefix after importing associated units
Patrick Plitzner
09:46 AM Revision 24663 (edit-svn): Do not close system.out
Patrick Plitzner
09:46 AM Revision 46713e68 (cdmlib): Do not close system.out
Patrick Plitzner

07/01/2015

06:06 PM Revision 36f17651 (taxeditor): Minor changes in implementation of AlignmentEditor.
Ben Stöver
06:06 PM Revision 24662 (edit-svn): Minor changes in implementation of AlignmentEditor.
Ben Stöver
06:03 PM Revision 24661 (edit-svn): ShowPherogramHandler now also handles single reads without attached ph...
Ben Stöver
06:03 PM Revision 70ab6696 (taxeditor): ShowPherogramHandler now also handles single reads without attache...
Ben Stöver
05:44 PM Revision 24660 (edit-svn): Fix compile error in FeatureDistributionDetailElement
Andreas Müller
05:44 PM Revision 93e9b94f (taxeditor): Fix compile error in FeatureDistributionDetailElement
Andreas Müller
05:34 PM Revision 1ef6ef7a (taxeditor): Support for empty alignments and single reads without pherograms a...
DerivateLabelProvider now used to label single read sequences. Ben Stöver
05:34 PM Revision 24659 (edit-svn): Support for empty alignments and single reads without pherograms added...
DerivateLabelProvider now used to label single read sequences. Ben Stöver
03:45 PM Revision 1d706311 (cdmlib): test for fallbackArea rule in DescriptionUtility.filterDistrubution f...
Andreas Kohlbecker
03:45 PM Revision 24658 (edit-svn): test for fallbackArea rule in DescriptionUtility.filterDistrubution fo...
Andreas Kohlbecker
03:01 PM Revision 24656 (edit-svn): adapting tests to changes in EuroPlusMedCondensedDistributionComposer ...
- testGetWebServiceUrlCountry() : removing restriction on specific order of area status parameters
- testGetConde...
Andreas Kohlbecker
03:01 PM Revision 24657 (edit-svn): implementing fallbackArea rule into DescriptionUtility.filterDistrubut...
Andreas Kohlbecker
03:01 PM Revision 3f10973b (cdmlib): implementing fallbackArea rule into DescriptionUtility.filterDistrubu...
Andreas Kohlbecker
03:01 PM Revision a0d252eb (cdmlib): adapting tests to changes in EuroPlusMedCondensedDistributionComposer...
- testGetWebServiceUrlCountry() : removing restriction on specific order of area status parameters
- testGetConde...
Andreas Kohlbecker
02:57 PM Revision 24652 (edit-svn): Extend step-by-step deletion test
- Used correct single read deletion method.
- Created test file
Patrick Plitzner
02:57 PM Revision 24653 (edit-svn): Add accidentally removed test file
Patrick Plitzner
02:57 PM Revision 24654 (edit-svn): Ignore createTestData()
Patrick Plitzner
02:57 PM Revision 24655 (edit-svn): Branch '/branches/cdmlib/abcd' replaced from /trunk/cdmlib:24648
Patrick Plitzner
12:28 PM Revision 24651 (edit-svn): implementing a new hook to alter the merged taxon profile feature tree
Andreas Kohlbecker
12:28 PM Revision 7508605c (cdm-dataportal): implementing a new hook to alter the merged taxon profile fea...
Andreas Kohlbecker
11:52 AM Revision 18727898 (cdm-dataportal): distributions now with status information
- status hidden per css
- status label on area active on mouse hover
Andreas Kohlbecker
11:52 AM Revision 24650 (edit-svn): distributions now with status information
- status hidden per css
- status label on area active on mouse hover
Andreas Kohlbecker
11:50 AM Revision f78fda81 (cdm-dataportal): code documentation cosmetics
Andreas Kohlbecker
11:50 AM Revision 24649 (edit-svn): code documentation cosmetics
Andreas Kohlbecker
11:42 AM Revision cb1e8099 (cdmlib): Ignore createTestData()
Patrick Plitzner
11:42 AM Revision 24648 (edit-svn): Ignore createTestData()
Patrick Plitzner
11:38 AM Revision 4e838f9b (cdmlib): Add accidentally removed test file
Patrick Plitzner
11:38 AM Revision 24647 (edit-svn): Add accidentally removed test file
Patrick Plitzner
11:34 AM Revision 5e20d614 (taxeditor): Class path edited to include new modules from LibrAlign and TIC.
Ben Stöver
11:34 AM Revision 24646 (edit-svn): Class path edited to include new modules from LibrAlign and TIC.
Ben Stöver
11:31 AM Revision fa849b89 (taxeditor): Adjustments to recent architecture changes in TIC and LibrAlign. (...
The following projects need to be checked out into the workspace from now on:
- https://secure.bioinfweb.info/Code/sv...
Ben Stöver
11:31 AM Revision 24645 (edit-svn): Adjustments to recent architecture changes in TIC and LibrAlign. (TIC ...
The following projects need to be checked out into the workspace from now on:
- https://secure.bioinfweb.info/Code/sv...
Ben Stöver
11:09 AM Revision 24644 (edit-svn): merge-update from trunk
Patrick Plitzner
11:09 AM Revision 136811ac (taxeditor): merge-update from trunk
Patrick Plitzner
11:04 AM Revision 24642 (edit-svn): Extend step-by-step deletion test
- Used correct single read deletion method.
- Created test file
Patrick Plitzner
11:04 AM Revision 24643 (edit-svn): Shelf '/shelves/cdmlib/p.plitzner' deleted
Patrick Plitzner
11:04 AM Revision 84ab49d7 (cdmlib): Extend step-by-step deletion test
- Used correct single read deletion method.
- Created test file
Patrick Plitzner
10:55 AM Revision eeb06b41 (cdmlib): Soften association type matching.
Patrick Plitzner
10:55 AM Revision 24638 (edit-svn): Fix potential NPE
Patrick Plitzner
10:55 AM Revision 24637 (edit-svn): Add method for single read deletion
Patrick Plitzner
10:55 AM Revision 24636 (edit-svn): Fix singleton constructor with specimen types
Patrick Plitzner
10:55 AM Revision 24639 (edit-svn): Test import of sparse ABCD file
Patrick Plitzner
10:55 AM Revision a1d53662 (cdmlib): Fix singleton constructor with specimen types
Patrick Plitzner
10:55 AM Revision 5aa71050 (cdmlib): Add method for single read deletion
Patrick Plitzner
10:55 AM Revision 2d73d2e2 (cdmlib): Fix potential NPE
Patrick Plitzner
10:55 AM Revision 9577e96c (cdmlib): Test import of sparse ABCD file
Patrick Plitzner
10:55 AM Revision 24640 (edit-svn): Map preparation material to derivation event description
Patrick Plitzner
10:55 AM Revision 8d1e4195 (cdmlib): Map preparation material to derivation event description
Patrick Plitzner
10:55 AM Revision 24641 (edit-svn): Soften association type matching.
Patrick Plitzner
10:42 AM Revision 24635 (edit-svn): Use correct single read deletion method
Patrick Plitzner
10:19 AM Revision 24634 (edit-svn): Disabled test data creation method
Patrick Plitzner
09:47 AM Revision 24633 (edit-svn): Branch '/branches/cdmlib/abcd' replaced from /trunk/cdmlib:24621
Patrick Plitzner
09:47 AM Revision 24632 (edit-svn): Add method for single read deletion
Patrick Plitzner
09:47 AM Revision 24627 (edit-svn): Remove comments
Patrick Plitzner
09:47 AM Revision 24629 (edit-svn): Do not set consensus sequence of single read alignment to null when
deleting the alignment Patrick Plitzner
09:47 AM Revision 24630 (edit-svn): Add test for deleting a derivative hierarchy step-by-step
Patrick Plitzner
09:47 AM Revision 24631 (edit-svn): Fix singleton constructor with specimen types
Patrick Plitzner
09:47 AM Revision 24626 (edit-svn): correcting the cleanup of sub areas labes in condensed distributions
Andreas Kohlbecker
09:47 AM Revision 24624 (edit-svn): subAreaPreference Rule can be run completely separately
- also reoving old unused code
- removing documentation on osoltete rule
- removing all missleading errors on...
Andreas Kohlbecker
09:47 AM Revision 24625 (edit-svn): applying subAreaPreference exclusively for maps
Andreas Kohlbecker
09:47 AM Revision 24628 (edit-svn): Add delete method for SingleReads
Patrick Plitzner
09:44 AM Revision 94465d21 (taxeditor): Fix deletion of single reads in Derivative Editor
Patrick Plitzner
09:44 AM Revision 1bdc3970 (taxeditor): Add missing transient method
Patrick Plitzner
09:44 AM Revision 24623 (edit-svn): Fix deletion of single reads in Derivative Editor
Patrick Plitzner
09:44 AM Revision 24622 (edit-svn): Add missing transient method
Patrick Plitzner
09:39 AM Revision 24621 (edit-svn): Soften association type matching.
Patrick Plitzner
09:39 AM Revision 24618 (edit-svn): Fix potential NPE
Patrick Plitzner
09:39 AM Revision 24620 (edit-svn): Map preparation material to derivation event description
Patrick Plitzner
09:39 AM Revision 24619 (edit-svn): Test import of sparse ABCD file
Patrick Plitzner
09:28 AM Revision 24616 (edit-svn): Add method for single read deletion
Patrick Plitzner
09:28 AM Revision 24617 (edit-svn): Branch '/branches/cdmlib/abcd' replaced from /branches/cdmlib/abcd:24603
Patrick Plitzner
09:28 AM Revision 24615 (edit-svn): Fix singleton constructor with specimen types
Patrick Plitzner
09:28 AM Revision 24614 (edit-svn): Add test for deleting a derivative hierarchy step-by-step
Patrick Plitzner
09:28 AM Revision ca363adb (cdmlib): Do not set consensus sequence of single read alignment to null when
deleting the alignment Patrick Plitzner
09:28 AM Revision 24613 (edit-svn): Do not set consensus sequence of single read alignment to null when
deleting the alignment Patrick Plitzner
09:27 AM Revision 24612 (edit-svn): Add delete method for SingleReads
Patrick Plitzner
09:27 AM Revision 50cb78ae (cdmlib): Add delete method for SingleReads
Patrick Plitzner
09:27 AM Revision 24611 (edit-svn): Remove comments
Patrick Plitzner
09:27 AM Revision 24422e7d (cdmlib): Remove comments
Patrick Plitzner
09:25 AM Revision 24610 (edit-svn): Add method for single read deletion
Patrick Plitzner
09:25 AM Revision 24606 (edit-svn): Add delete method for SingleReads
Patrick Plitzner
09:25 AM Revision 24607 (edit-svn): Do not set consensus sequence of single read alignment to null when
deleting the alignment Patrick Plitzner
09:25 AM Revision 24608 (edit-svn): Add test for deleting a derivative hierarchy step-by-step
Patrick Plitzner
09:25 AM Revision 24605 (edit-svn): Remove comments
Patrick Plitzner
09:25 AM Revision 24609 (edit-svn): Fix singleton constructor with specimen types
Patrick Plitzner
09:23 AM Revision 24604 (edit-svn): Map preparation materials to derivation event description
Patrick Plitzner
09:23 AM Revision 6747184a (taxeditor): Map preparation materials to derivation event description
Patrick Plitzner
09:22 AM Revision 24603 (edit-svn): Soften association type matching.
Patrick Plitzner
09:22 AM Revision 24602 (edit-svn): Map preparation material to derivation event description
Patrick Plitzner

06/30/2015

04:09 PM feature request #5050 (Resolved): revise the subAreaPreference rule for filtering Distributions
fixing all issues mentioned in this ticket:
* [r24598 applying subAreaPreference rule exclusively for maps|* r24597]...
Andreas Kohlbecker
10:50 AM feature request #5050 (In Progress): revise the subAreaPreference rule for filtering Distributions
Andreas Kohlbecker
10:33 AM feature request #5050 (In Progress): revise the subAreaPreference rule for filtering Distributions
The _subAreaPreference_ rule for filtering Distributions is implemented in the `DescriptionUtility.filterDistribution... Andreas Kohlbecker
04:04 PM Revision 8690cfe6 (cdmlib): correcting the cleanup of sub areas labes in condensed distributions
Andreas Kohlbecker
04:04 PM Revision 24601 (edit-svn): correcting the cleanup of sub areas labes in condensed distributions
Andreas Kohlbecker
03:49 PM Revision 24600 (edit-svn): Test import of sparse ABCD file
Patrick Plitzner
03:40 PM Revision 4a983d6e (cdmlib): applying subAreaPreference exclusively for maps
Andreas Kohlbecker
03:40 PM Revision 24598 (edit-svn): applying subAreaPreference exclusively for maps
Andreas Kohlbecker
03:40 PM Revision 24599 (edit-svn): Fix potential NPE
Patrick Plitzner
03:40 PM Revision eb4c21f9 (cdmlib): subAreaPreference Rule can be run completely separately
- also reoving old unused code
- removing documentation on osoltete rule
- removing all missleading errors on...
Andreas Kohlbecker
03:40 PM Revision 24597 (edit-svn): subAreaPreference Rule can be run completely separately
- also reoving old unused code
- removing documentation on osoltete rule
- removing all missleading errors on...
Andreas Kohlbecker
03:17 PM Revision 24596 (edit-svn): Fix potential NPE
Patrick Plitzner
03:17 PM Revision bdc49784 (cdmlib): Fix potential NPE
Patrick Plitzner
03:04 PM Revision 24595 (edit-svn): merge-update from trunk
Patrick Plitzner
03:04 PM Revision 9efdbc29 (taxeditor): merge-update from trunk
Patrick Plitzner
02:34 PM Revision d6feff56 (taxeditor): Add check to display statistice only when cache is alive
Cherian Mathew
01:47 PM Revision 24594 (edit-svn): Make background of icon transparent
Patrick Plitzner
01:47 PM Revision 23a2223a (taxeditor): Make background of icon transparent
Patrick Plitzner
01:21 PM Revision 24593 (edit-svn): Evaluate unit association type in ABCD import
- added test
- correctly set derivative hierarchy
Patrick Plitzner
01:21 PM Revision 18c0b932 (cdmlib): Evaluate unit association type in ABCD import
- added test
- correctly set derivative hierarchy
Patrick Plitzner
11:27 AM feature request #4366 (In Progress): Transmissionengine Distribution: implement rules for source ...
Andreas Kohlbecker
11:27 AM bug #4134 (In Progress): Transmissionengine Distribution seems to miss distributions for higher Taxa
Andreas Kohlbecker
09:49 AM Revision 87460b5e (cdmlib): Move prefix parsing to utility method and import state
Patrick Plitzner
09:49 AM Revision 24576 (edit-svn): Adapt to method parameter change
Patrick Plitzner
09:49 AM Revision 24577 (edit-svn): ??
Patrick Plitzner
09:49 AM Revision 24578 (edit-svn): - added missing columns for derivative import
Patrick Plitzner
09:49 AM Revision e0084606 (cdmlib): Check if primer or amplification already exist
Patrick Plitzner
09:49 AM Revision adab4473 (cdmlib): Evaluate UnitAssociationType during import
Current rule for the relation between the imported unit and its
associated units:
- "same population" => sibling rel...
Patrick Plitzner
09:49 AM Revision 921e3d54 (cdmlib): Add find- and countByTitle() methods to primer and amplification service
Patrick Plitzner
09:49 AM Revision 3a97226d (cdmlib): Split up test for unit associations
Patrick Plitzner
09:49 AM Revision cc19179c (cdmlib): Fix potential NPE
Patrick Plitzner
09:49 AM Revision e8255db1 (cdmlib): Parse sample designation in ABCD GGBN import
Patrick Plitzner
09:49 AM Revision 7920002e (cdmlib): Move up name parsing
Patrick Plitzner
09:49 AM Revision ed743b53 (cdmlib): Import associated units
- Set derivation event correctly
- adapted test
Patrick Plitzner
09:49 AM Revision 7b3adf28 (cdmlib): Import associated units via BioCase query
Patrick Plitzner
09:49 AM Revision 24579 (edit-svn): Import associated units in ABCD import
Worked on the order of importing units especially when associated units
are present.
Adapted test.
Patrick Plitzner
09:49 AM Revision c95e3daf (cdmlib): Move unit parsing to utility class
Patrick Plitzner
09:49 AM Revision 2574e41b (cdmlib): Import associated units in ABCD import
Worked on the order of importing units especially when associated units
are present.
Adapted test.
Patrick Plitzner
09:49 AM Revision bbf54111 (cdmlib): - added missing columns for derivative import
Patrick Plitzner
09:49 AM Revision 891ced88 (cdmlib): ??
Patrick Plitzner
09:49 AM Revision 47f461b2 (cdmlib): Adapt to method parameter change
Patrick Plitzner
09:49 AM Revision 24592 (edit-svn): Branch '/branches/cdmlib/abcd_dna_import' deleted
Patrick Plitzner
09:49 AM Revision 24591 (edit-svn): Branch '/branches/cdmlib/abcd' deleted
Patrick Plitzner
09:49 AM Revision 24590 (edit-svn): Check if primer or amplification already exist
Patrick Plitzner
09:49 AM Revision 24589 (edit-svn): Evaluate UnitAssociationType during import
Current rule for the relation between the imported unit and its
associated units:
- "same population" => sibling rel...
Patrick Plitzner
09:49 AM Revision 24588 (edit-svn): Add find- and countByTitle() methods to primer and amplification service
Patrick Plitzner
09:49 AM Revision 24587 (edit-svn): Split up test for unit associations
Patrick Plitzner
09:49 AM Revision 24586 (edit-svn): Fix potential NPE
Patrick Plitzner
09:49 AM Revision 24585 (edit-svn): Parse sample designation in ABCD GGBN import
Patrick Plitzner
09:49 AM Revision 24584 (edit-svn): Move up name parsing
Patrick Plitzner
09:49 AM Revision 24580 (edit-svn): Move unit parsing to utility class
Patrick Plitzner
09:49 AM Revision 24582 (edit-svn): Import associated units via BioCase query
Patrick Plitzner
09:49 AM Revision 24581 (edit-svn): Move prefix parsing to utility method and import state
Patrick Plitzner
09:49 AM Revision 24583 (edit-svn): Import associated units
- Set derivation event correctly
- adapted test
Patrick Plitzner
09:49 AM Revision 24571 (edit-svn): - correctly connected primer, amplification, single reads and sequences
- parsed UnitAssociation to correctly set specimen data
- added UnitAssociationParser
Patrick Plitzner
09:49 AM Revision 24570 (edit-svn): - refactored dna parsing
- added utility classes and person parser
- adapted test
- added parsing of more molecular parameters
Patrick Plitzner
09:49 AM Revision 24572 (edit-svn): - added preservation/preparation parameters
- fixed parsing of unitID Patrick Plitzner
09:49 AM Revision 24573 (edit-svn): - fixed date parsing
- fixed primer saving
- added new parameters to test
Patrick Plitzner
09:49 AM Revision 631a9c22 (cdmlib): Import associated units in ABCD import
First changes Patrick Plitzner
09:49 AM Revision 64260466 (cdmlib): Refactor ABCD import
Moved class variables to import state Patrick Plitzner
09:49 AM Revision 3f1d496b (cdmlib): - fixed date parsing
- fixed primer saving
- added new parameters to test
Patrick Plitzner
09:49 AM Revision 24574 (edit-svn): Refactor ABCD import
Moved class variables to import state Patrick Plitzner
09:49 AM Revision 25cbf231 (cdmlib): - correctly connected primer, amplification, single reads and sequences
- parsed UnitAssociation to correctly set specimen data
- added UnitAssociationParser
Patrick Plitzner
09:49 AM Revision 2bc696d1 (cdmlib): - refactored dna parsing
- added utility classes and person parser
- adapted test
- added parsing of more molecular parameters
Patrick Plitzner
09:49 AM Revision 24575 (edit-svn): Import associated units in ABCD import
First changes Patrick Plitzner
09:49 AM Revision 0fff86a8 (cdmlib): - added preservation/preparation parameters
- fixed parsing of unitID Patrick Plitzner
09:33 AM bug #5048 (Closed): cdm-server causes unusual high native memory consumption for jvm
Our cdm-server are suffering from memory problems! Evidence for this can bee seen st least since the middle of last w... Andreas Kohlbecker
08:27 AM feature request #5047 (Duplicate): option to show empty distribution maps
Hallo
es sollte die Karte auch angezeigt werden, wenn keine Distributionsdaten vorhanden sind. Hintergrund: ich ...
Andreas Kohlbecker
07:54 AM Revision 24569 (edit-svn): Check if primer or amplification already exist
Patrick Plitzner
07:52 AM Revision 24568 (edit-svn): Evaluate UnitAssociationType during import
Current rule for the relation between the imported unit and its
associated units:
- "same population" => sibling rel...
Patrick Plitzner

06/29/2015

11:31 PM Revision 006a8952 (cdmlib-apps): latest changes to BfN Import
Andreas Müller
09:06 PM Revision ee91f8de (cdmlib): correctly assigning INTRODUCED_NATURALIZED to n=naturalizes for conde...
Andreas Kohlbecker
09:06 PM Revision 24565 (edit-svn): Fix potential NPE
Patrick Plitzner
09:06 PM Revision 24564 (edit-svn): correctly assigning INTRODUCED_NATURALIZED to n=naturalizes for conden...
Andreas Kohlbecker
09:06 PM Revision 24567 (edit-svn): Add find- and countByTitle() methods to primer and amplification service
Patrick Plitzner
09:06 PM Revision 24566 (edit-svn): Split up test for unit associations
Patrick Plitzner
06:49 PM Revision 3eacaedc (cdmlib-apps): Add rl_animalis datasource
Andreas Müller
06:46 PM Revision 24563 (edit-svn): Add missing file from last commit
Cherian Mathew
06:46 PM Revision d58180a5 (taxeditor): Add missing file from last commit
Cherian Mathew
06:44 PM Revision e9c96f29 (taxeditor): #5010, #5046 Integrate remoting in polytomous key editor
Cherian Mathew
06:44 PM Revision 24562 (edit-svn): #5010, #5046 Integrate remoting in polytomous key editor
Cherian Mathew
05:58 PM Revision a06a017b (taxeditor): Move test file to correct location
Cherian Mathew
05:58 PM Revision 24561 (edit-svn): Move test file to correct location
Cherian Mathew
05:44 PM Revision e8cfab4d (cdmlib): removing obsolete warning from log - #3907
Andreas Kohlbecker
05:44 PM Revision 24559 (edit-svn): removing obsolete warning from log - #3907
Andreas Kohlbecker
05:44 PM Revision 24560 (edit-svn): fixing sort order in condensed distribution - #3907
Andreas Kohlbecker
05:44 PM Revision e962bf9d (cdmlib): fixing sort order in condensed distribution - #3907
Andreas Kohlbecker
05:12 PM Revision 24558 (edit-svn): Parse sample designation in ABCD GGBN import
Patrick Plitzner
05:12 PM Revision 24557 (edit-svn): Move up name parsing
Patrick Plitzner
05:11 PM Revision 24556 (edit-svn): Import associated units
- Set derivation event correctly
- adapted test
Patrick Plitzner
05:11 PM Revision 24555 (edit-svn): Import associated units via BioCase query
Patrick Plitzner
05:11 PM Revision 24554 (edit-svn): Move prefix parsing to utility method and import state
Patrick Plitzner
05:11 PM Revision 24553 (edit-svn): Move unit parsing to utility class
Patrick Plitzner
05:11 PM Revision 24552 (edit-svn): Import associated units in ABCD import
Worked on the order of importing units especially when associated units
are present.
Adapted test.
Patrick Plitzner
05:10 PM Revision 24551 (edit-svn): - added missing columns for derivative import
Patrick Plitzner
05:10 PM Revision 24550 (edit-svn): ??
Patrick Plitzner
05:10 PM Revision 24549 (edit-svn): Adapt to method parameter change
Patrick Plitzner
05:10 PM Revision 24548 (edit-svn): Import associated units in ABCD import
First changes Patrick Plitzner
05:10 PM Revision 24547 (edit-svn): Refactor ABCD import
Moved class variables to import state Patrick Plitzner
05:09 PM Revision 24546 (edit-svn): - fixed date parsing
- fixed primer saving
- added new parameters to test
Patrick Plitzner
05:09 PM Revision 24545 (edit-svn): - added preservation/preparation parameters
- fixed parsing of unitID Patrick Plitzner
05:09 PM Revision 24544 (edit-svn): - correctly connected primer, amplification, single reads and sequences
- parsed UnitAssociation to correctly set specimen data
- added UnitAssociationParser
Patrick Plitzner
05:09 PM Revision 24543 (edit-svn): - refactored dna parsing
- added utility classes and person parser
- adapted test
- added parsing of more molecular parameters
Patrick Plitzner
04:59 PM Revision 24539 (edit-svn): Further fix DistributionTree.matchesLevels #5041
Andreas Müller
04:59 PM Revision 24526 (edit-svn): minor
Andreas Müller
04:59 PM Revision 24542 (edit-svn): Parse sample designation in ABCD GGBN import
Patrick Plitzner
04:59 PM Revision 24541 (edit-svn): Move up name parsing
Patrick Plitzner
04:59 PM Revision 24540 (edit-svn): Add default delete method for uuid collections and implement update no...
Cherian Mathew
04:59 PM Revision 24525 (edit-svn): Fix sortindex computation in TaxonNode
After commit from 2015-06-18 the sortindex was computed slightly
different. In some cases the parent was not deproxie...
Andreas Müller
04:59 PM Revision 24538 (edit-svn): Fix DistributionTree.matchesLevels #5041
Andreas Müller
04:59 PM Revision 24537 (edit-svn): Fix label order marker types in imports
Andreas Müller
04:59 PM Revision 24536 (edit-svn): Fix ClassCastException in call to distributionInfo service #5041
Andreas Müller
04:59 PM Revision 24535 (edit-svn): Add getTermByIdInVoc method to vocabularies
Andreas Müller
04:59 PM Revision 24534 (edit-svn): Improve transmission engine parameters for web service (#5040)
Andreas Müller
04:59 PM Revision 24533 (edit-svn): Fix umlaut bug in parser test
Andreas Müller
04:59 PM Revision 24532 (edit-svn): Fix unparsed sections and subsections #4764
Andreas Müller
04:59 PM Revision 24531 (edit-svn): #5034 Add methods for testing handler / operations architecture
Cherian Mathew
04:59 PM Revision 24530 (edit-svn): Fix updateSortindex test for TaxonNode javassist objects
Andreas Müller
04:59 PM Revision 24529 (edit-svn): #5032 Add new test service for remoting clients
Cherian Mathew
04:59 PM Revision 24528 (edit-svn): Fix possible but in FeatureNode sortindex creation
See similar issue in TaxonNode sortindex creation. Andreas Müller
04:59 PM Revision 24527 (edit-svn): minor
Andreas Müller
04:59 PM Revision 24507 (edit-svn): Solve merge conflict for CdmTransactionalIntegrationTest
Andreas Müller
04:59 PM Revision 24508 (edit-svn): #5025 : Add CdmBase id+Class objects to UpdateResult
Cherian Mathew
04:59 PM Revision 24524 (edit-svn): some bugfixes in CondensedDistribution composition code - #3907
Andreas Kohlbecker
04:59 PM Revision 24523 (edit-svn): minor documentation cleaning
Andreas Kohlbecker
04:59 PM Revision 24522 (edit-svn): composition of condensed distribution fully implemented - #3907
Andreas Kohlbecker
04:59 PM Revision 24521 (edit-svn): base framework for condensedDistributions implemented - #4911
Andreas Kohlbecker
04:59 PM Revision 24520 (edit-svn): performance: avoiding second distribution filtering when creating the ...
Andreas Kohlbecker
04:59 PM Revision 24519 (edit-svn): replacing 'non-java-doc by {@inheritDoc}
Andreas Kohlbecker
04:59 PM Revision 24518 (edit-svn): Clean up transmission engine and BerlinModelTransformer
Andreas Müller
04:59 PM Revision 24517 (edit-svn): #5031 Corrected common service / dao collection methods to use uuid + ...
Cherian Mathew
04:59 PM Revision 24516 (edit-svn): Fix classloading priority of patched hibernate class
Cherian Mathew
04:59 PM Revision 24515 (edit-svn): #5025 : Add new cdm entity identifier object and use case in taxon nod...
Cherian Mathew
04:59 PM Revision 24514 (edit-svn): Improve E+M post import methods #3979
Andreas Müller
04:59 PM Revision 24513 (edit-svn): Improve distribution transmission engine for E+M import #3979
Andreas Müller
04:59 PM Revision 24512 (edit-svn): Add publisher role uuid and clean up FirstDataInserter #3979
Andreas Müller
04:59 PM Revision 24511 (edit-svn): Add hidden area related UUIDs to BerlinModelImport #3979 .5
Andreas Müller
04:59 PM Revision 24510 (edit-svn): Add E+M vocabulary uuid to E+M-Transformer
Andreas Müller
04:59 PM Revision 24509 (edit-svn): Add isImport request to import configurator
Andreas Müller
04:59 PM Revision 24500 (edit-svn): Fix ignored test in DescriptionElementDao #2815
Remaining tasks Andreas Müller
04:59 PM Revision 24499 (edit-svn): Cleanup Identifiable service
Andreas Müller
04:59 PM Revision 24506 (edit-svn): Cleanup dao test classes
Andreas Müller
04:59 PM Revision 24501 (edit-svn): #5007 : Correct setting of updated objects when deleting taxon
Cherian Mathew
04:59 PM Revision 24504 (edit-svn): Rename NonViralName.xxxAuthorTeam to xxxAuthorship #4968
Andreas Müller
04:59 PM Revision 24503 (edit-svn): 3.6.2 has just been released, setting version to 3.6.3-SNAPSHOT
Andreas Kohlbecker
04:59 PM Revision 24502 (edit-svn): Fix ignored test in TaxonDaoHibernateImplTest #2815
Andreas Müller
04:59 PM Revision 24505 (edit-svn): Rename remaining occurrences of xxxAuthorTeam #4968
Rename remaining occurrences of combinationAuthorTeam and
basionymAuthorTeam in code and other files
Andreas Müller
04:49 PM Revision 24498 (edit-svn): #5009 Add service method to update all nodes
Cherian Mathew
04:49 PM Revision 9a23effa (cdmlib): #5009 Add service method to update all nodes
Cherian Mathew
04:32 PM Revision 6018d7fe (cdmlib): fixing bug that occurred with empty distributions- #5041
Andreas Kohlbecker
04:32 PM Revision 24497 (edit-svn): fixing bug that occurred with empty distributions- #5041
Andreas Kohlbecker
04:09 PM Revision 0a72efb6 (taxeditor): #5009 Update plugin to use remoting handlers
Cherian Mathew
04:09 PM Revision 24496 (edit-svn): #5009 Update plugin to use remoting handlers
Cherian Mathew
04:02 PM Revision 24494 (edit-svn): #5009 : Add handler for update all nodes operation
Cherian Mathew
04:02 PM Revision 24493 (edit-svn): Add icon for switching to advanced media view
Patrick Plitzner
04:02 PM Revision 12f71b09 (taxeditor): Add icon for switching to advanced media view
Patrick Plitzner
04:02 PM Revision 24495 (edit-svn): Rename classes according to convention
Cherian Mathew
03:25 PM Revision 3419670f (taxeditor): merge-update from trunk
Patrick Plitzner
03:25 PM Revision 24492 (edit-svn): merge-update from trunk
Patrick Plitzner
03:21 PM Revision 75291bc4 (taxeditor): Rename classes according to convention
Cherian Mathew
03:21 PM Revision 5fe42cdd (taxeditor): #5009 : Add handler for update all nodes operation
Cherian Mathew
03:20 PM Revision 410227bb (taxeditor): Merge branch 'develop' of wp5.e-taxonomy.eu:/var/git/taxeditor int...
Conflicts:
eu.etaxonomy.taxeditor.cdmlib/src/main/java/eu/etaxonomy/cdm/api/lazyloading/CdmLazyLoader.java
eu.etaxo...
Cherian Mathew
03:20 PM Revision 24491 (edit-svn): Merge branch 'develop' of wp5.e-taxonomy.eu:/var/git/taxeditor into re...
Conflicts:
eu.etaxonomy.taxeditor.cdmlib/src/main/java/eu/etaxonomy/cdm/api/lazyloading/CdmLazyLoader.java
eu.etaxo...
Cherian Mathew
03:20 PM Revision 510d3be7 (cdm-dataportal): fixing position of name relationships for the accepted taxon...
Andreas Kohlbecker
03:20 PM Revision 24490 (edit-svn): fixing position of name relationships for the accepted taxon - #5038
Andreas Kohlbecker
02:54 PM Revision 41b4bfc9 (cdm-dataportal): implementing display of name relationships for the accepted t...
Andreas Kohlbecker
02:54 PM Revision 24489 (edit-svn): implementing display of name relationships for the accepted taxon - #5038
Andreas Kohlbecker
02:53 PM Revision 24488 (edit-svn): Update transient services with new delete method
Cherian Mathew
02:53 PM Revision 3e1ed38c (taxeditor): Update transient services with new delete method
Cherian Mathew
02:39 PM Revision 24487 (edit-svn): merge-update from trunk
Patrick Plitzner
02:39 PM Revision 501725be (taxeditor): merge-update from trunk
Patrick Plitzner
02:31 PM Revision 24484 (edit-svn): #5009 Add delete handler / operation for polytomous key view with corr...
Cherian Mathew
02:31 PM Revision 24485 (edit-svn): #5009 Correct test and test data
Cherian Mathew
02:31 PM Revision 24486 (edit-svn): #5009 Add operations and corresponding tests for delete / update nodes...
#5009 : missed in last commit Cherian Mathew
02:31 PM Revision fc14119f (taxeditor): #5009 Correct test and test data
Cherian Mathew
02:31 PM Revision 986bf16c (taxeditor): #5009 Add delete handler / operation for polytomous key view with ...
Cherian Mathew
02:31 PM Revision 91a8d98c (taxeditor): #5009 Add operations and corresponding tests for delete / update n...
#5009 : missed in last commit Cherian Mathew
02:30 PM Revision c4756086 (cdmlib-apps): Change redlist local logins
Andreas Müller
02:29 PM Revision 8783a193 (cdmlib-apps): Add redlist animalia datasource
Andreas Müller
02:28 PM Revision 5901681d (cdmlib): Add default delete method for uuid collections and implement update n...
Cherian Mathew
02:28 PM Revision 24483 (edit-svn): Add default delete method for uuid collections and implement update no...
Cherian Mathew
02:26 PM Revision 275ada95 (cdmlib-apps): Remove local diptera db from destinations
Andreas Müller
02:26 PM Revision 72060b99 (taxeditor): Show abbreviated title cache for authors and refernce in taxon det...
view Patrick Plitzner
02:26 PM Revision 24482 (edit-svn): Show abbreviated title cache for authors and refernce in taxon details
view Patrick Plitzner
01:48 PM Revision a0b6521f (cdmlib-apps): Minor improve E+M import
Andreas Müller
01:47 PM Revision 191f2328 (taxeditor): Show URI parsing exceptions below URI text field (fixes #5055, #50...
Patrick Plitzner
01:47 PM Revision 24481 (edit-svn): Show URI parsing exceptions below URI text field (fixes #5055, #5003, ...
Patrick Plitzner
01:45 PM Revision 24480 (edit-svn): Avoid duplication of edited team member (#4997)
Patrick Plitzner
01:45 PM Revision 7cb50f58 (taxeditor): Avoid duplication of edited team member (#4997)
Patrick Plitzner
01:43 PM Revision d04de77a (taxeditor): Add no marker without a markerType (#4588)
Patrick Plitzner
01:43 PM Revision 24479 (edit-svn): Add no marker without a markerType (#4588)
Patrick Plitzner
01:41 PM Revision 6296db4b (taxeditor): Add ticket number to TODO
Patrick Plitzner
01:41 PM Revision 24478 (edit-svn): Add ticket number to TODO
Patrick Plitzner
01:35 PM Revision 0409a9a0 (taxeditor): Refresh view after media view has been switched
Patrick Plitzner
01:35 PM Revision 24477 (edit-svn): Refresh view after media view has been switched
Patrick Plitzner
01:35 PM Revision 24475 (edit-svn): Add button for advanced media view to media attached to desccriptions
Patrick Plitzner
01:35 PM Revision 91eae82f (taxeditor): Add MediaViewSwitch to media collection elements
Refactored code to use a static method that creates the IAction object.
This can be added by the GUI element itself.
Patrick Plitzner
01:35 PM Revision da32e3d6 (taxeditor): Add button for advanced media view to media attached to desccriptions
Patrick Plitzner
01:35 PM Revision 24476 (edit-svn): Add MediaViewSwitch to media collection elements
Refactored code to use a static method that creates the IAction object.
This can be added by the GUI element itself.
Patrick Plitzner
01:35 PM Revision 24473 (edit-svn): Remove comments
Patrick Plitzner
01:35 PM Revision a77acb74 (taxeditor): Remove comments
Patrick Plitzner
01:35 PM Revision 025f1554 (taxeditor): Remove duplicate code for advanced media view (#4862)
Refactored code and added interface and abstract class to avoid
duplicate code.
Patrick Plitzner
01:35 PM Revision 24474 (edit-svn): Remove duplicate code for advanced media view (#4862)
Refactored code and added interface and abstract class to avoid
duplicate code.
Patrick Plitzner
01:14 PM Revision 24472 (edit-svn): Remove comments
Patrick Plitzner
01:14 PM Revision 24471 (edit-svn): Fix typo
Patrick Plitzner
01:14 PM Revision b99ec95c (taxeditor): Remove comments
Patrick Plitzner
01:14 PM Revision 2b7c8786 (taxeditor): Fix typo
Patrick Plitzner
01:13 PM Revision 24470 (edit-svn): Further fix DistributionTree.matchesLevels #5041
Andreas Müller
01:13 PM Revision c685c176 (cdmlib): Further fix DistributionTree.matchesLevels #5041
Andreas Müller
12:47 PM Revision 24469 (edit-svn): Move xml validation to base test class
Cherian Mathew
12:47 PM Revision bb2ee826 (taxeditor): Move xml validation to base test class
Cherian Mathew
11:24 AM Revision 971b7c3a (taxeditor): Remove manual session creation and re-enable failing tests
Cherian Mathew
11:24 AM Revision 24468 (edit-svn): Remove manual session creation and re-enable failing tests
Cherian Mathew
11:14 AM Revision 43854311 (taxeditor): Ignore failing tests to check if other tests fail
Cherian Mathew
11:14 AM Revision 24467 (edit-svn): Ignore failing tests to check if other tests fail
Cherian Mathew
10:40 AM Revision 24466 (edit-svn): Add logs to debug test issue on integration jenkins
Cherian Mathew
10:40 AM Revision 90dae518 (taxeditor): Add logs to debug test issue on integration jenkins
Cherian Mathew

06/28/2015

04:51 PM Revision 24464 (edit-svn): Fix DistributionTree.matchesLevels #5041
Andreas Müller
04:51 PM Revision 24465 (edit-svn): Fix test by making sure that all entities are loaded in sessions
Cherian Mathew
04:51 PM Revision 7d53a990 (cdmlib): Fix DistributionTree.matchesLevels #5041
Andreas Müller
02:32 PM Revision 24463 (edit-svn): Fix label order marker types in imports
Andreas Müller
02:32 PM Revision 1eece533 (cdmlib): Fix label order marker types in imports
Andreas Müller

06/27/2015

03:13 PM Revision be19c04e (cdmlib): Fix ClassCastException in call to distributionInfo service #5041
Andreas Müller
03:13 PM Revision 24462 (edit-svn): Fix ClassCastException in call to distributionInfo service #5041
Andreas Müller

06/26/2015

10:41 PM Revision 0cf0b572 (taxeditor): Fix test by making sure that all entities are loaded in sessions
Cherian Mathew
09:26 PM Revision 4a5ee6fe (cdmlib-apps): Adapt EM area hierarchy to filtering rules #3904
Also moving hidden area functionality from activator to occurrence
import class.
Andreas Müller
09:26 PM Revision 24461 (edit-svn): Adapt EM area hierarchy to filtering rules #3904
Also moving hidden area functionality from activator to occurrence
import class.
Andreas Müller
09:25 PM Revision 24459 (edit-svn): Add getTermByIdInVoc method to vocabularies
Andreas Müller
09:25 PM Revision 24460 (edit-svn): Improve transmissionengine parameters in E+M import activator #3979
Andreas Müller
09:25 PM Revision 57df1e7e (cdmlib): Add getTermByIdInVoc method to vocabularies
Andreas Müller
08:04 PM Revision bad845a9 (cdmlib): Improve transmission engine parameters for web service (#5040)
Andreas Müller
08:04 PM Revision 24458 (edit-svn): Improve transmission engine parameters for web service (#5040)
Andreas Müller
08:03 PM Revision 52f172cb (cdmlib-apps): Improve transmissionengine parameters in E+M import activator #3979
Andreas Müller
08:01 PM bug #5040 (Closed): Allow transmission engine webservice to define area level
Currently the namedAreaLevel to be used for transmission engine is hardcoded to TDWGLevel3 in DescriptionListControll... Andreas Müller
07:46 PM Revision 7dadeb2b (cdmlib-apps): Update hidden area list #3979
Andreas Müller
07:46 PM Revision 24457 (edit-svn): Update hidden area list #3979
Andreas Müller
07:27 PM Revision 24456 (edit-svn): Cleanup Flora Malesiana configurator
Andreas Müller
07:27 PM Revision a34899e5 (cdmlib-apps): Cleanup Flora Malesiana configurator
Andreas Müller
07:24 PM Revision 24454 (edit-svn): Fix umlaut bug in parser test
Andreas Müller
07:24 PM Revision 3b077794 (cdmlib): Fix umlaut bug in parser test
Andreas Müller
07:24 PM Revision 24455 (edit-svn): Add error handling to Euro+Med Activator #3979
Andreas Müller
07:00 PM Revision c16ec678 (cdmlib): Fix unparsed sections and subsections #4764
Andreas Müller
07:00 PM Revision 24453 (edit-svn): Fix unparsed sections and subsections #4764
Andreas Müller
06:57 PM bug #5039 (New): Update script for section.idInVoc to include (bot.)/zool.
Section and Subsection idInVoc has been taken from abbrev label. Those databases which switched abbrevLabel to purely... Andreas Müller
06:04 PM Revision 24452 (edit-svn): Remove unnecessary call to session debugger
Cherian Mathew
06:04 PM Revision 8a0d251d (taxeditor): Remove unnecessary call to session debugger
Cherian Mathew
05:49 PM Revision 24451 (edit-svn): #5036 Add missing command for polytomous key delete
Cherian Mathew
05:49 PM Revision 000c4b35 (taxeditor): #5036 Add missing command for polytomous key delete
Cherian Mathew
05:09 PM Revision 24450 (edit-svn): #5034 Add tests for handler / operations architecture
Fix test Cherian Mathew
05:09 PM Revision 0a7bd050 (taxeditor): #5034 Add tests for handler / operations architecture
Fix test Cherian Mathew
05:02 PM Revision 42358e6e (taxeditor): Adjustments to recent changes in TIC. (EDITor Code from now on wri...
Ben Stöver
05:02 PM Revision 24449 (edit-svn): Adjustments to recent changes in TIC. (EDITor Code from now on written...
Ben Stöver
04:38 PM Revision 24448 (edit-svn): #5034 Add methods for testing handler / operations architecture
Cherian Mathew
04:38 PM Revision 610855da (cdmlib): #5034 Add methods for testing handler / operations architecture
Cherian Mathew
03:28 PM Revision 0f7684f6 (cdm-dataportal): avoiding extra spacing added by legends below map - #4166
Andreas Kohlbecker
03:28 PM Revision 24447 (edit-svn): avoiding extra spacing added by legends below map - #4166
Andreas Kohlbecker
03:12 PM Revision 112716b9 (taxeditor): Fix LanguageString issue with test data
Cherian Mathew
03:12 PM Revision 24446 (edit-svn): Fix LanguageString issue with test data
Cherian Mathew
03:11 PM Revision bb3317c0 (taxeditor): Add log4j extras to apply expression filters
Cherian Mathew
03:11 PM Revision 24445 (edit-svn): Add log4j extras to apply expression filters
Cherian Mathew
01:45 PM Revision 1f36c510 (cdm-dataportal): avoiding extra spacing added by legends below map - #4166
Andreas Kohlbecker
01:45 PM Revision 24444 (edit-svn): avoiding extra spacing added by legends below map - #4166
Andreas Kohlbecker
12:19 PM Revision 24443 (edit-svn): documentation on the condensed distribution - #3907
- help page
- info icon next of the condensed distribution sting on the taxon page
Andreas Kohlbecker
12:19 PM Revision 423486b0 (cdm-dataportal): documentation on the condensed distribution - #3907
- help page
- info icon next of the condensed distribution sting on the taxon page
Andreas Kohlbecker
12:02 PM Revision 24442 (edit-svn): Fix updateSortindex test for TaxonNode javassist objects
Andreas Müller
12:02 PM Revision 79b2f591 (cdmlib): Fix updateSortindex test for TaxonNode javassist objects
Andreas Müller
11:37 AM Revision 24441 (edit-svn): Move test data to be compatible with last commit
Cherian Mathew
11:37 AM Revision 721dde11 (taxeditor): Move test data to be compatible with last commit
Cherian Mathew
11:34 AM Revision bdde50e7 (taxeditor): Move test classes to right packages
Cherian Mathew
11:34 AM Revision 24440 (edit-svn): Move test classes to right packages
Cherian Mathew
11:24 AM Revision 24439 (edit-svn): #5032 Add new test service for remoting clients
Cherian Mathew
11:24 AM Revision 933331e0 (cdmlib): #5032 Add new test service for remoting clients
Cherian Mathew
11:20 AM Revision 44acc7e5 (taxeditor): #5028,#5032 Add implementation and use of new test service and Set...
Cherian Mathew
11:20 AM Revision 24438 (edit-svn): #5028,#5032 Add implementation and use of new test service and Set htt...
Cherian Mathew
09:58 AM Revision 24437 (edit-svn): aligning test data with changed field names *AuthorTeam -> *Authorship...
Andreas Kohlbecker
09:58 AM Revision a5d56f1e (cdm-dataportal): aligning test data with changed field names *AuthorTeam -> *A...
Andreas Kohlbecker
09:56 AM Revision b85d5cc1 (cdm-dataportal): aligning test data with changed field names *AuthorTeam -> *A...
Andreas Kohlbecker
09:56 AM Revision 24436 (edit-svn): aligning test data with changed field names *AuthorTeam -> *Authorship...
Andreas Kohlbecker

06/25/2015

11:56 PM Revision 24435 (edit-svn): Fix possible but in FeatureNode sortindex creation
See similar issue in TaxonNode sortindex creation. Andreas Müller
11:56 PM Revision 6a6ae886 (cdmlib): Fix possible but in FeatureNode sortindex creation
See similar issue in TaxonNode sortindex creation. Andreas Müller
11:47 PM Revision f37d249f (cdmlib): minor
Andreas Müller
11:47 PM Revision 24434 (edit-svn): minor
Andreas Müller
11:40 PM Revision 24433 (edit-svn): minor
Andreas Müller
11:40 PM Revision 2fb0b459 (cdmlib): minor
Andreas Müller
11:40 PM Revision 24432 (edit-svn): Fix sortindex computation in TaxonNode
After commit from 2015-06-18 the sortindex was computed slightly
different. In some cases the parent was not deproxie...
Andreas Müller
11:40 PM Revision 3a35f0e6 (cdmlib): Fix sortindex computation in TaxonNode
After commit from 2015-06-18 the sortindex was computed slightly
different. In some cases the parent was not deproxie...
Andreas Müller
11:00 PM Revision 0d2c9bab (cdm-dataportal): fixing #4977: advanced search with distribution filter is broken
Andreas Kohlbecker
11:00 PM Revision 24431 (edit-svn): condensed distribution implemented - #3907
- option in taxon page settings to enable the condensed distribution string
- native areas in bold by css
Andreas Kohlbecker
11:00 PM Revision bda17f32 (cdm-dataportal): condensed distribution implemented - #3907
- option in taxon page settings to enable the condensed distribution string
- native areas in bold by css
Andreas Kohlbecker
11:00 PM Revision 24430 (edit-svn): fixing #4977: advanced search with distribution filter is broken
Andreas Kohlbecker
10:20 PM Revision f90b297d (cdmlib-apps): Add error handling to Euro+Med Activator #3979
Andreas Müller
09:50 PM Revision 24429 (edit-svn): fixing location and content of a settings decription
Andreas Kohlbecker
09:50 PM Revision dec0b265 (cdm-dataportal): fixing location and content of a settings decription
Andreas Kohlbecker
06:39 PM Revision c59da264 (cdmlib): some bugfixes in CondensedDistribution composition code - #3907
Andreas Kohlbecker
06:39 PM Revision 24428 (edit-svn): some bugfixes in CondensedDistribution composition code - #3907
Andreas Kohlbecker
05:21 PM Revision 24427 (edit-svn): Fix remoting code compilation errors
Cherian Mathew
05:21 PM Revision c8d37de7 (taxeditor): Fix remoting code compilation errors
Cherian Mathew
05:02 PM Revision 24425 (edit-svn): Remove remoting code from develop
Cherian Mathew
05:02 PM Revision 24426 (edit-svn): Branch '/branches/taxeditor/develop' replaced from /branches/taxeditor...
Patrick Plitzner
04:30 PM Revision 24422 (edit-svn): base framework for condensedDistributions implemented - #4911
Andreas Kohlbecker
04:30 PM Revision ae5c7985 (cdmlib): composition of condensed distribution fully implemented - #3907
Andreas Kohlbecker
04:30 PM Revision 0570a827 (cdmlib): base framework for condensedDistributions implemented - #4911
Andreas Kohlbecker
04:30 PM Revision 24424 (edit-svn): minor documentation cleaning
Andreas Kohlbecker
04:30 PM Revision 24423 (edit-svn): composition of condensed distribution fully implemented - #3907
Andreas Kohlbecker
04:30 PM Revision 8a2faa05 (cdmlib): minor documentation cleaning
Andreas Kohlbecker
04:30 PM Revision 24420 (edit-svn): replacing 'non-java-doc by {@inheritDoc}
Andreas Kohlbecker
04:30 PM Revision 85976c83 (cdmlib): replacing 'non-java-doc by {@inheritDoc}
Andreas Kohlbecker
04:30 PM Revision 24421 (edit-svn): performance: avoiding second distribution filtering when creating the ...
Andreas Kohlbecker
04:30 PM Revision 03c4eee9 (cdmlib): performance: avoiding second distribution filtering when creating the...
Andreas Kohlbecker
04:20 PM Revision 7115f486 (cdmlib-apps): Cleanup BfnXmlImport
Andreas Müller
04:20 PM Revision 24419 (edit-svn): Cleanup BfnXmlImport
Andreas Müller
03:34 PM Revision 4cea6554 (taxeditor): Fix remaining test erros for collection call changes from #5031
Cherian Mathew
03:34 PM Revision 24418 (edit-svn): Fix remaining test erros for collection call changes from #5031
Cherian Mathew
03:12 PM Revision 9b7145e0 (cdmlib): Clean up transmission engine and BerlinModelTransformer
Andreas Müller
03:12 PM Revision 24417 (edit-svn): Improve E+M-Activator and E+M occurrence import
Andreas Müller
03:12 PM Revision 24416 (edit-svn): Clean up transmission engine and BerlinModelTransformer
Andreas Müller
03:11 PM Revision 9a6fb38b (cdmlib-apps): Improve E+M-Activator and E+M occurrence import
Andreas Müller
02:46 PM Revision e09f9c40 (taxeditor): #5031 Update remoting code to be compatible with new common servic...
Cherian Mathew
02:46 PM Revision 24415 (edit-svn): #5031 Corrected common service / dao collection methods to use uuid + ...
Cherian Mathew
02:46 PM Revision 24414 (edit-svn): #5031 Update remoting code to be compatible with new common service co...
Cherian Mathew
02:21 PM Revision 3e0da563 (cdmlib): #5031 Corrected common service / dao collection methods to use uuid +...
Cherian Mathew
12:34 PM feature request #5030 (Duplicate): Implement new dto object for TaxonNavigator
Since the performance of the taxon navigator is quite slow when remote loading taxon nodes, it is required to have a ... Cherian Mathew
10:31 AM Revision 24413 (edit-svn): Merge branch 'develop' of wp5.e-taxonomy.eu:/var/git/taxeditor into re...
Cherian Mathew
10:31 AM Revision e74b4be3 (taxeditor): Merge branch 'develop' of wp5.e-taxonomy.eu:/var/git/taxeditor int...
Cherian Mathew
09:36 AM Revision 24412 (edit-svn): #5025 : Implement load of UpdateResult using new cdm entity identifier
Cherian Mathew
09:36 AM Revision 24411 (edit-svn): Merge branch 'develop' of wp5.e-taxonomy.eu:/var/git/taxeditor into re...
Conflicts:
eu.etaxonomy.taxeditor.cdmlib/.classpath
eu.etaxonomy.taxeditor.cdmlib/META-INF/MANIFEST.MF
eu.etaxonom...
Cherian Mathew
09:36 AM Revision 06abbea1 (cdmlib): Fix classloading priority of patched hibernate class
Cherian Mathew
09:36 AM Revision 24410 (edit-svn): Enable tests again
Cherian Mathew
09:36 AM Revision 24409 (edit-svn): Fix classloading priority of patched hibernate class
Cherian Mathew
09:36 AM Revision 24408 (edit-svn): #5025 : Add new cdm entity identifier object and use case in taxon nod...
Cherian Mathew
09:36 AM Revision 61e836d6 (cdmlib): #5025 : Add new cdm entity identifier object and use case in taxon no...
Cherian Mathew

06/24/2015

01:14 AM Revision 24407 (edit-svn): Improve E+M import post methods #3979
Andreas Müller
01:14 AM Revision 89dc0db4 (cdmlib-apps): Improve E+M import post methods #3979
Andreas Müller
01:10 AM Revision 24404 (edit-svn): Add hidden areas to Euro+Med import #3979 .5
Andreas Müller
01:10 AM Revision 24405 (edit-svn): Add users and roles to E+M import #3979
Andreas Müller
01:10 AM Revision 24406 (edit-svn): Improve E+M import for transmission engine #3979
Andreas Müller
01:10 AM Revision b4027377 (cdmlib): Improve E+M post import methods #3979
Andreas Müller
01:10 AM Revision 24403 (edit-svn): Add E+M shapefile attributes import to E+M import #3979
Andreas Müller
01:10 AM Revision 24401 (edit-svn): Cleanup Euro+Med Activator
Andreas Müller
01:10 AM Revision 24400 (edit-svn): Improve E+M post import methods #3979
Andreas Müller
01:10 AM Revision 24402 (edit-svn): Add Distribution transmission engine to E+M import #3979
Andreas Müller
01:08 AM Revision 249ab8e3 (cdmlib-apps): Improve E+M import for transmission engine #3979
Andreas Müller
01:08 AM Revision 24399 (edit-svn): Improve distribution transmission engine for E+M import #3979
Andreas Müller
01:08 AM Revision e6e385c2 (cdmlib): Improve distribution transmission engine for E+M import #3979
Andreas Müller
06:53 PM Revision 7f777e9c (cdmlib-apps): Add users and roles to E+M import #3979
Andreas Müller
06:52 PM Revision 24398 (edit-svn): Add publisher role uuid and clean up FirstDataInserter #3979
Andreas Müller
06:52 PM Revision c31b52c2 (cdmlib): Add publisher role uuid and clean up FirstDataInserter #3979
Andreas Müller
05:42 PM Revision ea7b7584 (taxeditor): #5025 : Implement load of UpdateResult using new cdm entity identi...
Cherian Mathew
05:12 PM Revision a96b340e (cdmlib-apps): Add hidden areas to Euro+Med import #3979 .5
Andreas Müller
05:11 PM Revision 24397 (edit-svn): Add hidden area related UUIDs to BerlinModelImport #3979 .5
Andreas Müller
05:11 PM Revision 31e6213c (cdmlib): Add hidden area related UUIDs to BerlinModelImport #3979 .5
Andreas Müller
04:46 PM Revision 514f7053 (cdmlib-apps): Add E+M shapefile attributes import to E+M import #3979
Andreas Müller
04:39 PM Revision 86e3fef5 (cdmlib): Add E+M vocabulary uuid to E+M-Transformer
Andreas Müller
04:39 PM Revision 24396 (edit-svn): Add E+M vocabulary uuid to E+M-Transformer
Andreas Müller
03:30 PM Revision 5eb0a68d (cdmlib): Add isImport request to import configurator
Andreas Müller
03:30 PM Revision 24395 (edit-svn): Add isImport request to import configurator
Andreas Müller
03:28 PM Revision c4f9c344 (cdmlib-apps): Add Distribution transmission engine to E+M import #3979
Andreas Müller
03:25 PM Revision abc846c0 (cdmlib-apps): Cleanup Euro+Med Activator
Andreas Müller
02:57 PM task #4911: improve performance of distributionInfoFor service
this was not closed in Release 3.5.2
Applying another improvement which is only in git at the moment: d798947 (UPDA...
Andreas Kohlbecker
02:37 PM Revision 24394 (edit-svn): Import associated units
- Set derivation event correctly
- adapted test
Patrick Plitzner
02:19 PM Revision 5bf5b601 (taxeditor): Merge branch 'develop' of ssh://dev.e-taxonomy.eu/var/git/taxedito...
Patrick Plitzner
02:19 PM Revision 24393 (edit-svn): Merge branch 'develop' of ssh://dev.e-taxonomy.eu/var/git/taxeditor in...
Patrick Plitzner
02:19 PM Revision 297bf978 (taxeditor): Empty text fields return empty string and not null
Patrick Plitzner
02:19 PM Revision 24392 (edit-svn): Empty text fields return empty string and not null
Patrick Plitzner
02:17 PM Revision 8d268297 (cdmlib): #5025 : Add CdmBase id+Class objects to UpdateResult
Cherian Mathew
02:17 PM Revision 24391 (edit-svn): #5025 : Add CdmBase id+Class objects to UpdateResult
Cherian Mathew
01:08 PM Revision 24390 (edit-svn): Revert "index on develop: 6992bef Rename NonViralName authorteams to a...
This reverts commit 32cded397931ad359f7818fdfb91a113a074342e. Katja Luther
01:08 PM Revision b1f9db96 (taxeditor): Revert "index on develop: 6992bef Rename NonViralName authorteams ...
This reverts commit 32cded397931ad359f7818fdfb91a113a074342e. Katja Luther
11:38 AM Revision d1f86977 (cdm-vaadin): cdmlib.version updated to 3.6.3-SNAPSHOT making use of the new pr...
Andreas Kohlbecker
11:38 AM Revision 24389 (edit-svn): cdmlib.version updated to 3.6.3-SNAPSHOT making use of the new profile...
Andreas Kohlbecker
11:24 AM Revision 24388 (edit-svn): mvn profile 'align-cdmlib-version' with maven-replacer-plugin to updat...
- this profile can be activated by supplying -Dalign-cdmlib-version as argument to the mvn command
for example: mvn...
Andreas Kohlbecker
11:24 AM Revision ff4582ba (cdm-vaadin): mvn profile 'align-cdmlib-version' with maven-replacer-plugin to ...
- this profile can be activated by supplying -Dalign-cdmlib-version as argument to the mvn command
for example: mvn...
Andreas Kohlbecker
09:40 AM Revision 19a8bfe7 (taxeditor): Merge branch 'develop' of wp5.e-taxonomy.eu:/var/git/taxeditor int...
Conflicts:
eu.etaxonomy.taxeditor.cdmlib/.classpath
eu.etaxonomy.taxeditor.cdmlib/META-INF/MANIFEST.MF
eu.etaxonom...
Cherian Mathew
09:26 AM Revision 3237a360 (taxeditor): Enable tests again
Cherian Mathew
09:14 AM Revision 24387 (edit-svn): Import associated units via BioCase query
Patrick Plitzner
09:06 AM Revision 24385 (edit-svn): #4074 : Fix initialisation, use and disposal of mocke session owner
Cherian Mathew
09:06 AM Revision 24386 (edit-svn): Move prefix parsing to utility method and import state
Patrick Plitzner
09:06 AM Revision 698cfb0e (taxeditor): #4074 : Fix initialisation, use and disposal of mocke session owner
Cherian Mathew

06/23/2015

06:47 PM Revision 24384 (edit-svn): Adapt pom to new version in cdmlib-app
Andreas Müller
06:47 PM Revision 472bf5b2 (cdmlib-apps): Adapt pom to new version in cdmlib-app
Andreas Müller
06:39 PM Revision 24383 (edit-svn): Rename NonViralName authorteams to authorship #4968
Andreas Müller
06:39 PM Revision 48014773 (cdmlib-apps): Rename NonViralName authorteams to authorship #4968
Andreas Müller
06:34 PM Revision 24379 (edit-svn): Rename NonViralName.xxxAuthorTeam to xxxAuthorship #4968
Andreas Müller
06:34 PM Revision 24380 (edit-svn): Rename remaining occurrences of xxxAuthorTeam #4968
Rename remaining occurrences of combinationAuthorTeam and
basionymAuthorTeam in code and other files
Andreas Müller
06:34 PM Revision 24382 (edit-svn): Solve merge conflict for CdmTransactionalIntegrationTest
Andreas Müller
06:34 PM Revision 24378 (edit-svn): Rename NonViralName authorteams to authorship #4968
Andreas Müller
06:34 PM Revision 6992befa (taxeditor): Rename NonViralName authorteams to authorship #4968
Andreas Müller
06:34 PM Revision 24381 (edit-svn): Cleanup dao test classes
Andreas Müller
06:22 PM Revision 24377 (edit-svn): Update cdmlib version to 3.6.3-SNAPSHOT
Cherian Mathew
06:22 PM Revision 8b7b09a5 (taxeditor): Update cdmlib version to 3.6.3-SNAPSHOT
Cherian Mathew
06:13 PM Revision e62f0e9d (taxeditor): Fix initialisation of mock session owner
Cherian Mathew
06:13 PM Revision 24376 (edit-svn): Fix initialisation of mock session owner
Cherian Mathew
05:58 PM Revision 4851a3ca (taxeditor): Some actions for adjusting pherogram displaying added.
Ben Stöver
05:58 PM Revision 24375 (edit-svn): Some actions for adjusting pherogram displaying added.
Ben Stöver
05:56 PM Revision a067b731 (cdmlib): Solve merge conflict for CdmTransactionalIntegrationTest
Andreas Müller
05:56 PM Revision bd8e017a (cdmlib): Cleanup dao test classes
Andreas Müller
05:56 PM Revision 236ab161 (cdmlib): Rename remaining occurrences of xxxAuthorTeam #4968
Rename remaining occurrences of combinationAuthorTeam and
basionymAuthorTeam in code and other files
Andreas Müller
05:56 PM Revision ce7c7aa3 (cdmlib): Rename NonViralName.xxxAuthorTeam to xxxAuthorship #4968
Andreas Müller
04:56 PM Revision 24373 (edit-svn): Updating develop poms back to pre merge state
Andreas Kohlbecker
04:56 PM Revision 24372 (edit-svn): Merge branch 'master' into develop
Andreas Kohlbecker
04:56 PM Revision 7beeb84b (cdmlib): 3.6.2 has just been released, setting version to 3.6.3-SNAPSHOT
Andreas Kohlbecker
04:56 PM Revision 24374 (edit-svn): Shelf '/shelves/cdm-vaadin/a.kohlbecker' deleted
Andreas Kohlbecker
04:56 PM Revision 24369 (edit-svn): Merge branch 'release/3.6.2'
Andreas Kohlbecker
04:56 PM Revision 24368 (edit-svn): updating poms for branch'release/3.6.2' with non-snapshot versions
Andreas Kohlbecker
04:56 PM Revision 24367 (edit-svn): upgrading the cdmlib dependency to 3.6.2
Andreas Kohlbecker
04:56 PM Revision 24366 (edit-svn): disabling pushReleases true for testing
Andreas Kohlbecker
04:56 PM Revision 24365 (edit-svn): 3.6.2 has just been released, setting version to 3.6.3-SNAPSHOT
Andreas Kohlbecker
04:56 PM Revision 24371 (edit-svn): updating develop poms to master versions to avoid merge conflicts
Andreas Kohlbecker
04:56 PM Revision 24370 (edit-svn): updating poms for 3.6.3-SNAPSHOT development
Andreas Kohlbecker
04:53 PM Revision 10672e78 (cdmlib): Fix ignored test in TaxonDaoHibernateImplTest #2815
Andreas Müller
04:53 PM Revision 24364 (edit-svn): Fix ignored test in TaxonDaoHibernateImplTest #2815
Andreas Müller
04:40 PM Revision 24363 (edit-svn): Move unit parsing to utility class
Patrick Plitzner
03:38 PM Revision 24362 (edit-svn): Import associated units in ABCD import
Worked on the order of importing units especially when associated units
are present.
Adapted test.
Patrick Plitzner
03:25 PM Revision 24360 (edit-svn): #5007 : Correct setting of updated objects when deleting taxon
Cherian Mathew
03:25 PM Revision 76b05b1c (cdmlib): #5007 : Correct setting of updated objects when deleting taxon
Cherian Mathew
03:25 PM Revision 24361 (edit-svn): - added missing columns for derivative import
Patrick Plitzner
03:06 PM Revision 9632d60d (taxeditor): Merge branch 'develop' of wp5.e-taxonomy.eu:/var/git/taxeditor int...
Conflicts:
eu.etaxonomy.taxeditor.navigation/src/main/java/eu/etaxonomy/taxeditor/navigation/navigator/TaxonNodeComp...
Cherian Mathew
03:06 PM Revision 24359 (edit-svn): Merge branch 'develop' of wp5.e-taxonomy.eu:/var/git/taxeditor into re...
Conflicts:
eu.etaxonomy.taxeditor.navigation/src/main/java/eu/etaxonomy/taxeditor/navigation/navigator/TaxonNodeComp...
Cherian Mathew
02:45 PM Revision 24358 (edit-svn): Delete renamed file
Cherian Mathew
02:45 PM Revision c555b209 (taxeditor): Delete renamed file
Cherian Mathew
01:26 PM Revision 4cf77d2c (cdmlib): Fix ignored test in DescriptionElementDao #2815
Remaining tasks Andreas Müller
01:26 PM Revision 24357 (edit-svn): Fix ignored test in DescriptionElementDao #2815
Remaining tasks Andreas Müller
01:18 PM Revision 24355 (edit-svn): Fix remaining conflict
Cherian Mathew
01:18 PM Revision 530ba367 (taxeditor): Fix remaining conflict
Cherian Mathew
01:18 PM Revision 24356 (edit-svn): Cleanup Identifiable service
Andreas Müller
01:15 PM Revision d2fa54b8 (taxeditor): Merge branch 'develop' of wp5.e-taxonomy.eu:/var/git/taxeditor int...
Conflicts:
eu.etaxonomy.taxeditor.editor/src/main/java/eu/etaxonomy/taxeditor/editor/name/operation/DeleteTaxonOpera...
Cherian Mathew
01:15 PM Revision 24354 (edit-svn): Merge branch 'develop' of wp5.e-taxonomy.eu:/var/git/taxeditor into re...
Conflicts:
eu.etaxonomy.taxeditor.editor/src/main/java/eu/etaxonomy/taxeditor/editor/name/operation/DeleteTaxonOpera...
Cherian Mathew
01:11 PM Revision 24352 (edit-svn): PherogramViewPart that is started from within AlignmentEditor now use...
Ben Stöver
01:11 PM Revision 76456771 (taxeditor): PherogramViewPart that is started from within AlignmentEditor now...
Ben Stöver
01:11 PM Revision 24353 (edit-svn): #5007 : Rename move taxon node handler
Cherian Mathew
01:01 PM Revision ea8a5aa2 (taxeditor): Fix issues with merge conflicts
Cherian Mathew
01:01 PM Revision 24351 (edit-svn): Fix issues with merge conflicts
Cherian Mathew
11:48 AM Revision 24349 (edit-svn): Adapt to method parameter change
Patrick Plitzner
11:48 AM Revision 24350 (edit-svn): ??
Patrick Plitzner
11:41 AM Revision 24348 (edit-svn): Import associated units in ABCD import
First changes Patrick Plitzner
11:40 AM Revision 24347 (edit-svn): Refactor ABCD import
Moved class variables to import state Patrick Plitzner
11:09 AM Revision 24341 (edit-svn): Import associated units in ABCD import
First changes Patrick Plitzner
11:09 AM Revision 24346 (edit-svn): - fixed date parsing
- fixed primer saving
- added new parameters to test
Patrick Plitzner
11:09 AM Revision 24342 (edit-svn): Branch '/branches/cdmlib/abcd_dna_import' deleted
Patrick Plitzner
11:09 AM Revision 24344 (edit-svn): - correctly connected primer, amplification, single reads and sequences
- parsed UnitAssociation to correctly set specimen data
- added UnitAssociationParser
Patrick Plitzner
11:09 AM Revision 24345 (edit-svn): - added preservation/preparation parameters
- fixed parsing of unitID Patrick Plitzner
11:09 AM Revision 24343 (edit-svn): - refactored dna parsing
- added utility classes and person parser
- adapted test
- added parsing of more molecular parameters
Patrick Plitzner
10:46 AM Revision 24340 (edit-svn): Refactor ABCD import
Moved class variables to import state Patrick Plitzner
10:39 AM Revision 20b683b4 (cdm-webapp): notes on a possible solution to the auto-clean problem
Andreas Kohlbecker
10:31 AM feature request #5021 (Rejected): TreeNodeDropAdapterAssistant should use RemotingMoveTaxonNodeHa...
Currently the TreeNodeDropAdapterAssistant duplicates most of the functionality implemented in the RemotingMoveTaxonN... Cherian Mathew
10:28 AM Revision b090df35 (taxeditor): #5007 : Rename move taxon node handler
Cherian Mathew
10:27 AM Revision b42ce39a (cdm-webapp): bumping cdm dependencies to 3.6.3-SNAPSHOT
Andreas Kohlbecker
10:25 AM Revision a359b43b (cdm-webapp): solving conflict in cdmlib version
Andreas Kohlbecker
10:22 AM Revision 7a1c4784 (cdm-webapp): merging release/3.6.2
Andreas Kohlbecker
10:18 AM Revision a1056a0c (cdm-webapp): explanation why auto-clean is disabled
Andreas Kohlbecker
10:16 AM Revision eb2adc6c (cdm-server): [maven-release-plugin] prepare for next development iteration
edit-jenkins
10:16 AM Revision 24339 (edit-svn): [maven-release-plugin] prepare for next development iteration
edit-jenkins
10:16 AM Revision 24338 (edit-svn): [maven-release-plugin] copy for tag cdm-server-3.6.2
edit-jenkins
10:16 AM Revision 24337 (edit-svn): [maven-release-plugin] prepare release cdm-server-3.6.2
edit-jenkins
10:16 AM Revision 2263c567 (cdm-server): [maven-release-plugin] prepare release cdm-server-3.6.2
edit-jenkins
10:09 AM Revision 24334 (edit-svn): Fixes from Katja for commit issue
Cherian Mathew
10:09 AM Revision 24335 (edit-svn): #5007 : Add remoting handler / operations for the taxon navigator
Cherian Mathew
10:09 AM Revision 790395af (taxeditor): Fixes from Katja for commit issue
Cherian Mathew
10:09 AM Revision 24336 (edit-svn): #5007 : Integrated remoting handler / operations for taxon navigator ui
Cherian Mathew
09:40 AM Revision fd336918 (cdm-webapp): updating poms for branch'release/3.6.2' with non-snapshot versions
Andreas Kohlbecker
09:39 AM Revision f3d07c11 (cdm-webapp): disabling auto-clean, it otherwise deletes the artifact to be dep...
Andreas Kohlbecker
09:31 AM Revision 6c511765 (taxeditor): #5007 : Integrated remoting handler / operations for taxon navigat...
Cherian Mathew

06/22/2015

06:21 PM Revision 24333 (edit-svn): Position properties of LibrAlign pherogram models are now connected to...
Ben Stöver
06:21 PM Revision 6dbfba88 (taxeditor): Position properties of LibrAlign pherogram models are now connecte...
Ben Stöver
06:02 PM Revision 6fa9c9e0 (cdmlib): Cleanup Identifiable service
Andreas Müller
05:15 PM Revision 9be6a364 (cdm-webapp): setting dependencies to 3.6.2
Andreas Kohlbecker
05:12 PM Revision 196c706d (cdm-webapp): updating poms for 3.6.3-SNAPSHOT development
Andreas Kohlbecker
05:12 PM Revision c2dbd664 (cdm-webapp): updating poms for 3.6.2 branch with snapshot versions
Andreas Kohlbecker
05:03 PM Revision f2608024 (cdm-webapp): configuring project for jgitflow-maven-plugin
Andreas Kohlbecker
05:00 PM Revision 525b64ac (cdm-webapp): udating the versions to 3.6.2-SNAPTSHOT, since 3.6.1 has release ...
Andreas Kohlbecker
04:58 PM Revision b13da0b9 (taxeditor): #5007 : Add remoting handler / operations for the taxon navigator
Cherian Mathew
04:36 PM Revision 24331 (edit-svn): Fix problem with non persisted taxon titleCache change: #5018
Andreas Müller
04:36 PM Revision ae85a8ea (taxeditor): Fix problem with non persisted taxon titleCache change: #5018
Andreas Müller
04:36 PM Revision 24332 (edit-svn): Tag '/tags/cdmlib/cdmlib-parent-3.6.2' created from /branches/cdmlib/3...
Jenkins
03:57 PM Revision f41f0a13 (cdm-vaadin): Merge branch 'master' into develop
Andreas Kohlbecker
03:57 PM Revision 397817ea (cdm-vaadin): updating develop poms to master versions to avoid merge conflicts
Andreas Kohlbecker
03:57 PM Revision 496b2672 (cdm-vaadin): Updating develop poms back to pre merge state
Andreas Kohlbecker
03:57 PM Revision f3bd3381 (cdm-vaadin): Merge branch 'release/3.6.2'
Andreas Kohlbecker
03:50 PM Revision 24330 (edit-svn): adapt service call to model change
Patrick Plitzner
03:50 PM Revision 2f56c6db (taxeditor): adapt service call to model change
Patrick Plitzner
03:49 PM Revision 24329 (edit-svn): adapt transient service methods to cdmlib changes
Patrick Plitzner
03:49 PM Revision e1623027 (taxeditor): adapt transient service methods to cdmlib changes
Patrick Plitzner
03:48 PM Revision 4c33ecde (cdm-vaadin): updating poms for branch'release/3.6.2' with non-snapshot versions
Andreas Kohlbecker
03:33 PM Revision 24328 (edit-svn): updating version for release 3.6.2
Jenkins
03:33 PM Revision 3bf96cb2 (cdmlib): updating version for release 3.6.2
Jenkins
02:58 PM Revision 24326 (edit-svn): - removed initial expand of sections
Patrick Plitzner
02:58 PM Revision 3128f1e0 (taxeditor): - changed type of "Materials & Methods" to text instead of Defined...
- fixed label Patrick Plitzner
02:58 PM Revision c0c6e635 (taxeditor): - split off "Preparation/Preservation section" from dna sample gen...
section Patrick Plitzner
02:58 PM Revision 24327 (edit-svn): - update parent scroll form on property change (fixes #4881)
Patrick Plitzner
02:58 PM Revision 015a151c (taxeditor): - fixed potential NPE
Patrick Plitzner
02:58 PM Revision 24325 (edit-svn): - fixed potential NPE
Patrick Plitzner
02:58 PM Revision 24324 (edit-svn): - fixed potential NPE
Patrick Plitzner
02:58 PM Revision 24323 (edit-svn): - changed type of "Materials & Methods" to text instead of DefinedTerm
- fixed label Patrick Plitzner
02:58 PM Revision 24322 (edit-svn): - split off "Preparation/Preservation section" from dna sample general
section Patrick Plitzner
02:58 PM Revision b48bc2d5 (taxeditor): - fixed potential NPE
Patrick Plitzner
02:58 PM Revision 92e4b107 (taxeditor): - update parent scroll form on property change (fixes #4881)
Patrick Plitzner
02:58 PM Revision ff0e2f7c (taxeditor): - removed initial expand of sections
Patrick Plitzner
02:41 PM Revision 24321 (edit-svn): Copy DeterminationEvent data when moving derivates
Patrick Plitzner
02:41 PM Revision a4bd052f (cdmlib): Copy DeterminationEvent data when moving derivates
Patrick Plitzner
02:38 PM Revision 24320 (edit-svn): removing failed hotfix tag
Andreas Kohlbecker
02:18 PM Revision 24319 (edit-svn): [maven-release-plugin] prepare for next development iteration
edit-jenkins
02:18 PM Revision 24318 (edit-svn): [maven-release-plugin] copy for tag cdmlib-parent-3.6.4
edit-jenkins
02:15 PM Revision 24317 (edit-svn): [maven-release-plugin] prepare release cdmlib-parent-3.6.4
edit-jenkins
02:04 PM Revision 24316 (edit-svn): removing failed hotfix tag
Andreas Kohlbecker
01:56 PM Revision 24315 (edit-svn): fixing name of release tag
Andreas Kohlbecker
01:52 PM Revision 24314 (edit-svn): removing failed hotfix tag
Andreas Kohlbecker
01:16 PM Revision 24313 (edit-svn): Adjustments to recent changes in LibrAlign.
Ben Stöver
01:16 PM Revision c951d62c (taxeditor): Adjustments to recent changes in LibrAlign.
Ben Stöver
12:51 PM Revision 24312 (edit-svn): Merge branch 'develop' of wp5.e-taxonomy.eu:/var/git/taxeditor into re...
Conflicts:
eu.etaxonomy.taxeditor.bulkeditor/src/main/java/eu/etaxonomy/taxeditor/bulkeditor/referencingobjects/Refe...
Cherian Mathew
12:51 PM Revision c36e67ab (taxeditor): Merge branch 'develop' of wp5.e-taxonomy.eu:/var/git/taxeditor int...
Conflicts:
eu.etaxonomy.taxeditor.bulkeditor/src/main/java/eu/etaxonomy/taxeditor/bulkeditor/referencingobjects/Refe...
Cherian Mathew
11:55 AM Revision 24311 (edit-svn): [maven-release-plugin] prepare for next development iteration
edit-jenkins
11:55 AM Revision 24310 (edit-svn): [maven-release-plugin] copy for tag cdmlib-parent-3.6.3
edit-jenkins
11:53 AM Revision 24309 (edit-svn): [maven-release-plugin] prepare release cdmlib-parent-3.6.3
edit-jenkins
11:51 AM Revision 24308 (edit-svn): Fix pesi and app-imports pom version
Andreas Müller
11:51 AM Revision fc873cb0 (cdmlib-apps): Fix pesi and app-imports pom version
Andreas Müller
11:38 AM Revision 0f2408d8 (cdm-vaadin): upgrading the cdmlib dependency to 3.6.2
Andreas Kohlbecker
11:31 AM Revision 1706bc52 (taxeditor): fixed conflicts from last commit
Cherian Mathew
11:31 AM Revision 24307 (edit-svn): fixed conflicts from last commit
Cherian Mathew
11:30 AM Revision 24306 (edit-svn): all delete methods need an Uuid as argument
Conflicts:
eu.etaxonomy.taxeditor.editor/src/main/java/eu/etaxonomy/taxeditor/editor/view/dataimport/transientServic...
Katja Luther
11:30 AM Revision 562118a0 (taxeditor): all delete methods need an Uuid as argument
Conflicts:
eu.etaxonomy.taxeditor.editor/src/main/java/eu/etaxonomy/taxeditor/editor/view/dataimport/transientServic...
Katja Luther
11:27 AM Revision 45dcb303 (cdmlib-apps): Fix eflora pom version
Andreas Müller
11:27 AM Revision 24305 (edit-svn): Fix eflora pom version
Andreas Müller
11:25 AM Revision 812371a9 (cdm-vaadin): updating poms for 3.6.3-SNAPSHOT development
Andreas Kohlbecker
11:23 AM Revision e6ed7de3 (cdm-vaadin): disabling pushReleases true for testing
Andreas Kohlbecker
11:21 AM Revision 24304 (edit-svn): resetting project version to 3.6.2-SNAPSHOT
Andreas Kohlbecker
11:21 AM Revision faadd8d7 (cdm-vaadin): resetting project version to 3.6.2-SNAPSHOT
Andreas Kohlbecker
10:52 AM Revision 24303 (edit-svn): fixing bug with pushReleases
Andreas Kohlbecker
10:52 AM Revision 24302 (edit-svn): change delete argument to UUID
Katja Luther
10:52 AM Revision 6a0c3c1d (taxeditor): change delete argument to UUID
Katja Luther
10:33 AM Revision 24301 (edit-svn): bumping project version to 3.6.2-SNAPSHOT, 3.6.1 has already been rel...
Andreas Kohlbecker
10:33 AM Revision 32b21ed7 (cdmlib): bumping project version to 3.6.2-SNAPSHOT, 3.6.1 has already been re...
Andreas Kohlbecker
10:33 AM Revision 24300 (edit-svn): bumping project version to 3.6.2-SNAPSHOT, 3.6.1 has already been rel...
Andreas Kohlbecker
10:33 AM Revision 4cbd3451 (cdmlib): bumping project version to 3.6.2-SNAPSHOT, 3.6.1 has already been re...
Andreas Kohlbecker
10:32 AM Revision 44993ce4 (taxeditor): add empty test folder
Andreas Müller
10:32 AM Revision 24299 (edit-svn): add empty test folder
Andreas Müller

06/19/2015

04:19 PM task #4338 (New): [MASTER] Handle abbreviated title and protected cache correctly in TaxEditor
Andreas Müller
03:40 PM Revision 24298 (edit-svn): Branch '/branches/taxeditor/develop' replaced from /branches/taxeditor...
Andreas Müller
03:40 PM Revision 24297 (edit-svn): Branch '/branches/taxeditor/develop-fix' replaced from /branches/taxed...
Andreas Müller
03:40 PM Revision 24296 (edit-svn): Branch '/branches/taxeditor/develop-fix' created from /branches/taxedi...
Cherian Mathew
03:40 PM Revision 24295 (edit-svn): [maven-release-plugin] prepare for next development iteration
edit-jenkins
03:40 PM Revision 24294 (edit-svn): [maven-release-plugin] copy for tag cdmlib-parent-3.6.2
edit-jenkins
03:37 PM Revision 24293 (edit-svn): [maven-release-plugin] prepare release cdmlib-parent-3.6.2
edit-jenkins
03:20 PM Revision 24292 (edit-svn): TaxonNavigator : added refresh of navigator on data change
TaxonNavigatorLabels : new interface with label strings used by taxon navigator handlers
RemotingChangeAcceptedTaxonT...
Cherian Mathew
03:20 PM Revision 83a1a479 (taxeditor): TaxonNavigator : added refresh of navigator on data change
TaxonNavigatorLabels : new interface with label strings used by taxon navigator handlers
RemotingChangeAcceptedTaxonT...
Cherian Mathew
03:15 PM Revision 24290 (edit-svn): add empty test folder
Andreas Müller
03:15 PM Revision 61fc1843 (taxeditor): add empty test folder
Andreas Müller
03:15 PM Revision 24291 (edit-svn): Branch '/branches/cdmlib/3.6.2' created from /branches/cdmlib/3.6.2:24267
Andreas Kohlbecker
03:06 PM Revision 24289 (edit-svn): fix 2 of the merge issues
Andreas Müller
03:06 PM Revision 1643e04c (taxeditor): fix 2 of the merge issues
Andreas Müller
02:51 PM Revision 92e55e8b (cdmlib): fix titleCache for et al. teams #4967
Andreas Müller
02:51 PM Revision 24288 (edit-svn): fix titleCache for et al. teams #4967
Andreas Müller
02:45 PM Revision a52587ac (cdm-vaadin): fixing bug with pushReleases
Andreas Kohlbecker
02:34 PM Revision 842b5671 (cdm-vaadin): Updated cdmlib version in pom of develop branch to 3.6.2-SNAPSHOT
Jenkins
02:34 PM Revision 24287 (edit-svn): Updated cdmlib version in pom of develop branch to 3.6.2-SNAPSHOT
Jenkins
02:34 PM Revision 7ba31d29 (cdm-vaadin): updating poms for 3.6.3-SNAPSHOT development
jenkins
02:34 PM Revision 24286 (edit-svn): updating poms for 3.6.3-SNAPSHOT development
jenkins
02:34 PM Revision 9893a3ce (cdm-vaadin): Changed project version to 3.6.2-SNAPSHOT
Jenkins
02:34 PM Revision 24285 (edit-svn): Changed project version to 3.6.2-SNAPSHOT
Jenkins
01:46 PM Revision 348a9e4c (cdmlib): add non-absolute test to isServiceAvailable #4587
Andreas Müller
01:46 PM Revision 24284 (edit-svn): add non-absolute test to isServiceAvailable #4587
Andreas Müller
01:06 PM Revision 80607d26 (cdm-vaadin): upgrading dependency jsch.agent.version of jgit-flow plugin to 0....
Andreas Kohlbecker
01:06 PM Revision 24283 (edit-svn): upgrading dependency jsch.agent.version of jgit-flow plugin to 0.1.53 ...
Andreas Kohlbecker
12:42 PM Revision 24281 (edit-svn): Actions for creating and updating the consensus sequence in AlignmentE...
Ben Stöver
12:42 PM Revision ecce3492 (taxeditor): Actions for creating and updating the consensus sequence in Alignm...
Ben Stöver
12:42 PM Revision 24282 (edit-svn): setting mavn prerequisites
Andreas Kohlbecker
12:30 PM Revision eb522fd8 (cdm-vaadin): setting mavn prerequisites
Andreas Kohlbecker
12:02 PM Revision f4f0f913 (cdmlib): fix parsing of names with teams in name and reference #2223
Andreas Müller
12:02 PM Revision 24280 (edit-svn): fix parsing of names with teams in name and reference #2223
Andreas Müller
11:11 AM Revision d8c84690 (taxeditor): AbstractAlignmentEditorHandler added.
Ben Stöver
11:11 AM Revision 24279 (edit-svn): AbstractAlignmentEditorHandler added.
Ben Stöver
10:43 AM Revision 24278 (edit-svn): ICdmDataChangeService, CdmUIDataChangeService, CdmDataChangeService : ...
CdmApplicationState, CdmStore : added data change service to app state
CdmChangeEvent, ICdmChangeListener : added cha...
Cherian Mathew
10:43 AM Revision ae7e2680 (taxeditor): ICdmDataChangeService, CdmUIDataChangeService, CdmDataChangeServic...
CdmApplicationState, CdmStore : added data change service to app state
CdmChangeEvent, ICdmChangeListener : added cha...
Cherian Mathew
10:43 AM Revision 24277 (edit-svn): RemotingCdmUpdateOperation : corrected exception handling
RemotingChangeAcceptedTaxonToSynonymOperation : new remoting operation class
server.properties : server properties fo...
Cherian Mathew
10:43 AM Revision 5904a60f (taxeditor): RemotingCdmUpdateOperation : corrected exception handling
RemotingChangeAcceptedTaxonToSynonymOperation : new remoting operation class
server.properties : server properties fo...
Cherian Mathew
10:42 AM Revision 24276 (edit-svn): rebase from remoting-4.0 branch
Cherian Mathew
10:42 AM Revision 323a4942 (taxeditor): rebase from remoting-4.0 branch
Cherian Mathew
10:41 AM Revision 24275 (edit-svn): plugin.xml : updated plugin for new remoting handlers
RemotingCdmHandler, RemotingCdmOperation, RemotingCdmUpdateOperation : new handler / operation architecture
RemotingC...
Cherian Mathew
10:41 AM Revision 6c610cc5 (taxeditor): plugin.xml : updated plugin for new remoting handlers
RemotingCdmHandler, RemotingCdmOperation, RemotingCdmUpdateOperation : new handler / operation architecture
RemotingC...
Cherian Mathew
09:49 AM Revision ae586e95 (cdm-vaadin): bumping jgit-flow plugin to 1.0-m5.1
Andreas Kohlbecker
09:49 AM Revision 24274 (edit-svn): bumping jgit-flow plugin to 1.0-m5.1
Andreas Kohlbecker
09:00 AM Revision 5d8a1bb8 (taxeditor): made compatible with cdmlib superclass
Cherian Mathew
09:00 AM Revision 24273 (edit-svn): made compatible with cdmlib superclass
Cherian Mathew

06/18/2015

05:54 PM Revision 24272 (edit-svn): [maven-release-plugin] prepare for next development iteration
edit-jenkins
05:54 PM Revision 24271 (edit-svn): [maven-release-plugin] copy for tag cdmlib-parent-3.6.1
edit-jenkins
05:51 PM Revision 24270 (edit-svn): [maven-release-plugin] prepare release cdmlib-parent-3.6.1
edit-jenkins
03:59 PM Revision 24265 (edit-svn): Tag '/tags/cdmlib/3.6.2' deleted
Andreas Kohlbecker
03:59 PM Revision 24266 (edit-svn): fix #4976 Titlecache for new vocabularies not filled correctly
Andreas Müller
03:59 PM Revision 24264 (edit-svn): Merge branch 'develop' of ssh://dev.e-taxonomy.eu/var/git/taxeditor in...
Conflicts:
eu.etaxonomy.taxeditor.editor/src/main/java/eu/etaxonomy/taxeditor/editor/view/dataimport/transientServic...
Katja Luther
03:59 PM Revision 24267 (edit-svn): adding support for https in UriUtils
Andreas Kohlbecker
03:59 PM Revision a42b3f42 (taxeditor): Merge branch 'develop' of ssh://dev.e-taxonomy.eu/var/git/taxedito...
Conflicts:
eu.etaxonomy.taxeditor.editor/src/main/java/eu/etaxonomy/taxeditor/editor/view/dataimport/transientServic...
Katja Luther
03:59 PM Revision 24268 (edit-svn): Branch '/branches/cdmlib/3.6.2' deleted
Andreas Kohlbecker
03:59 PM Revision 24269 (edit-svn): Tag '/tags/cdmlib/3.6.2' created from /branches/cdmlib/3.6.2:24267
Andreas Kohlbecker
03:33 PM Revision 24262 (edit-svn): change delete argument to UUID
Katja Luther
03:33 PM Revision 24261 (edit-svn): Merge branch 'develop' of wp5.e-taxonomy.eu:/var/git/taxeditor into re...
Cherian Mathew
03:33 PM Revision 24263 (edit-svn): all delete methods need an Uuid as argument
Katja Luther
03:33 PM Revision acc28c93 (taxeditor): Merge branch 'develop' of wp5.e-taxonomy.eu:/var/git/taxeditor int...
Cherian Mathew
03:28 PM Revision b275ef1e (taxeditor): all delete methods need an Uuid as argument
Katja Luther
03:24 PM Revision a153e34f (taxeditor): corrected pom merge
Cherian Mathew
03:24 PM Revision 24260 (edit-svn): corrected pom merge
Cherian Mathew
03:22 PM Revision 16016d51 (taxeditor): Merge remote-tracking branch 'origin/develop' into develop
Andreas Müller
03:22 PM Revision 24259 (edit-svn): Merge remote-tracking branch 'origin/develop' into develop
Andreas Müller
03:17 PM Revision 24258 (edit-svn): minor
Andreas Müller
03:17 PM Revision 24257 (edit-svn): Merge branch 'develop' of wp5.e-taxonomy.eu:/var/git/taxeditor into re...
Conflicts:
eu.etaxonomy.taxeditor.cdmlib/.classpath
eu.etaxonomy.taxeditor.cdmlib/.gitignore
eu.etaxonomy.taxedito...
Cherian Mathew
03:17 PM Revision dde2b107 (taxeditor): Merge branch 'develop' of wp5.e-taxonomy.eu:/var/git/taxeditor int...
Conflicts:
eu.etaxonomy.taxeditor.cdmlib/.classpath
eu.etaxonomy.taxeditor.cdmlib/.gitignore
eu.etaxonomy.taxedito...
Cherian Mathew
03:15 PM Revision 36ce3c34 (taxeditor): change delete argument to UUID
Katja Luther
03:04 PM Revision 64528d1a (taxeditor): minor
Andreas Müller
02:59 PM Revision 817fbd3d (cdmlib): minor
Katja Luther
02:59 PM Revision 24256 (edit-svn): minor
Katja Luther
02:50 PM Revision e064cc19 (cdmlib): forgot to check in the changes
Katja Luther
02:50 PM Revision 24255 (edit-svn): forgot to check in the changes
Katja Luther
02:46 PM Revision 0a32c706 (cdmlib): - add @Audited to all type properties
- add taxonNodeComparator for rank and alphabetical orderedVocabularyDao
- change delete() methods arguments to UUIDs
Katja Luther
02:46 PM Revision 24254 (edit-svn): - add @Audited to all type properties
- add taxonNodeComparator for rank and alphabetical orderedVocabularyDao
- change delete() methods arguments to UUIDs
Katja Luther
02:29 PM Revision 24253 (edit-svn): Branch '/branches/cdmlib/RankSpecificRootNodes-1' deleted
Andreas Müller
02:29 PM Revision e1c012ef (taxeditor): setting root logger setting to WARN
Cherian Mathew
02:29 PM Revision 24252 (edit-svn): setting root logger setting to WARN
Cherian Mathew
02:08 PM Revision 24251 (edit-svn): removed programmatic log level setting
Cherian Mathew
02:08 PM Revision c6ee1b2a (taxeditor): removed programmatic log level setting
Cherian Mathew
02:05 PM bug #4884: Update Reference_AUD.refType to allow NULL
update script does not exist yet!
Andreas Müller
11:56 AM bug #4884: Update Reference_AUD.refType to allow NULL
in the update script the Reference_AUD.reftype allows NULL, but that creates a new column reftype. We need to allow N... Katja Luther
01:55 PM Revision 24250 (edit-svn): corrected remote source to use initialzed cdm server
Cherian Mathew
01:55 PM Revision a622e4c0 (taxeditor): corrected remote source to use initialzed cdm server
Cherian Mathew
01:18 PM Revision 8b391072 (cdmlib): Merge branch 'RankSpecificRootNodes-1'
Andreas Müller
01:18 PM Revision 24249 (edit-svn): Merge branch 'RankSpecificRootNodes-1'
Andreas Müller
01:11 PM Revision c570e284 (cdmlib): Fixing test for listRankSpecificRootNodes
Andreas Müller
01:11 PM Revision 24248 (edit-svn): Fixing test for listRankSpecificRootNodes
Andreas Müller
12:58 PM Revision 24246 (edit-svn): setting root loffer level to warn
Cherian Mathew
12:58 PM Revision 24247 (edit-svn): fix listRankSpecificRootNodes behavior for ranks in between and some
additional tests Andreas Müller
12:58 PM Revision f0909be0 (taxeditor): setting root loffer level to warn
Cherian Mathew
11:58 AM Revision 24245 (edit-svn): add @Audited to the argument type
Katja Luther
11:58 AM Revision 844234ce (cdmlib): add @Audited to the argument type
Katja Luther
11:48 AM Revision b03505f7 (cdmlib): fix listRankSpecificRootNodes behavior for ranks in between and some
additional tests Andreas Müller
11:28 AM Revision 24244 (edit-svn): CdmRemoteSourceBase : using user service for db checks
httpInvokerServiceClients.xml : updated database service config
HttpInvokerServicesTest : added polytomous key servic...
Cherian Mathew
11:28 AM Revision 0fd7ff08 (taxeditor): CdmRemoteSourceBase : using user service for db checks
httpInvokerServiceClients.xml : updated database service config
HttpInvokerServicesTest : added polytomous key servic...
Cherian Mathew
11:22 AM Revision bbd51e1c (cdmlib): Merge branch 'master' of wp5.e-taxonomy.eu:/var/git/cdmlib
Cherian Mathew
11:22 AM Revision 24243 (edit-svn): Merge branch 'master' of wp5.e-taxonomy.eu:/var/git/cdmlib
Cherian Mathew
11:14 AM Revision a743d2da (cdmlib): IUserService, UserService : added db check methods
remoting-services : moved database service to be included in security filter Cherian Mathew
11:14 AM Revision 24242 (edit-svn): IUserService, UserService : added db check methods
remoting-services : moved database service to be included in security filter Cherian Mathew
10:31 AM Revision 24241 (edit-svn): Merge branch 'RankSpecificRootNodes-1'
Andreas Müller
10:31 AM Revision 9b9184c5 (cdmlib): Merge branch 'RankSpecificRootNodes-1'
Andreas Müller
09:45 AM Revision 24238 (edit-svn): CdmApplicationState:New class to handle application state
CdmStore, BaseRemotingTest : using new application state class
TaxonNavigatorTest : ignoring test for now
TaxonNaviga...
Cherian Mathew
09:45 AM Revision 04f2494e (taxeditor): CdmApplicationState:New class to handle application state
CdmStore, BaseRemotingTest : using new application state class
TaxonNavigatorTest : ignoring test for now
TaxonNaviga...
Cherian Mathew
09:45 AM Revision 24240 (edit-svn): Merge branch 'master' of ssh://dev.e-taxonomy.eu/var/git/cdmlib
Andreas Müller
09:45 AM Revision 24239 (edit-svn): cleanup dataset
Andreas Müller

06/17/2015

07:31 PM Revision 5ae3fb8d (cdmlib): Merge branch 'master' of ssh://dev.e-taxonomy.eu/var/git/cdmlib
Andreas Müller
06:38 PM Revision 24234 (edit-svn): removed reference to cdm-server
Cherian Mathew
06:38 PM Revision 24235 (edit-svn): eu.etaxonomy.taxeditor.cdmlib/.classpath,MANIFEST.MF : removed cdm-ser...
OperationTestBase, TaxonNameEditorTest, : refactoring
MockConversationEnabled : class to mock interface IConversatio...
Cherian Mathew
06:38 PM Revision 24236 (edit-svn): removing properties file from repo
Cherian Mathew
06:38 PM Revision 24237 (edit-svn): ignoring bin folder
Cherian Mathew
06:38 PM Revision d2decaca (cdmlib): some additional test for #2778
Andreas Müller
06:38 PM Revision 24233 (edit-svn): some additional test for #2778
Andreas Müller
06:29 PM Revision 24232 (edit-svn): add some tests for rankSpecificRootNodes, related to #2778
Andreas Müller
06:29 PM Revision c92c5c63 (cdmlib): add some tests for rankSpecificRootNodes, related to #2778
Andreas Müller
06:27 PM Revision 4ad1d8de (taxeditor): ignoring bin folder
Cherian Mathew
05:04 PM Revision 24231 (edit-svn): Merge branch 'RankSpecificRootNodes-1' of https://dev.e-taxonomy.eu/gi...
Andreas Müller
05:04 PM Revision b9fda8f7 (cdmlib): Merge branch 'RankSpecificRootNodes-1' of https://dev.e-taxonomy.eu/g...
Andreas Müller
04:55 PM Revision f989e265 (cdmlib): avoiding LEFT OUTER JOIN by splitting query in two
Andreas Kohlbecker
04:55 PM Revision 24230 (edit-svn): avoiding LEFT OUTER JOIN by splitting query in two
Andreas Kohlbecker
04:29 PM Revision 58d848ab (cdmlib): adding support for https in UriUtils
Andreas Kohlbecker
04:29 PM Revision 24229 (edit-svn): adding support for https in UriUtils
Andreas Kohlbecker
04:23 PM Revision 4794624d (cdmlib): adding support for https in UriUtils
Andreas Kohlbecker
04:06 PM Revision 24228 (edit-svn): - fixed date parsing
- fixed primer saving
- added new parameters to test
Patrick Plitzner
03:52 PM Revision 24226 (edit-svn): - correctly connected primer, amplification, single reads and sequences
- parsed UnitAssociation to correctly set specimen data
- added UnitAssociationParser
Patrick Plitzner
03:52 PM Revision 24224 (edit-svn): merge-update from trunk
Patrick Plitzner
03:52 PM Revision 24225 (edit-svn): - refactored dna parsing
- added utility classes and person parser
- adapted test
- added parsing of more molecular parameters
Patrick Plitzner
03:52 PM Revision 24227 (edit-svn): - added preservation/preparation parameters
- fixed parsing of unitID Patrick Plitzner
03:52 PM Revision 61ec9fa7 (taxeditor): merge-update from trunk
Patrick Plitzner
03:34 PM Revision d39efa8a (cdmlib): avoiding LEFT OUTER JOIN by splitting query in two
Andreas Kohlbecker
03:34 PM Revision 24223 (edit-svn): avoiding LEFT OUTER JOIN by splitting query in two
Andreas Kohlbecker
03:31 PM Revision 24222 (edit-svn): ToggleInsertOverwriteHandler now also triggers enabling and disabling ...
Actions for cutting pherograms on the left and right ends added.
Action for reverse complementing single reads added....
Ben Stöver
03:31 PM Revision c31e35b4 (taxeditor): ToggleInsertOverwriteHandler now also triggers enabling and disabl...
Actions for cutting pherograms on the left and right ends added.
Action for reverse complementing single reads added....
Ben Stöver
03:07 PM Revision cc6163c2 (cdmlib): cleanup dataset
Andreas Müller
02:42 PM Revision b464e37e (cdmlib): fix testdata for #2778
Andreas Müller
02:42 PM Revision 24221 (edit-svn): fix testdata for #2778
Andreas Müller
02:34 PM Revision 24220 (edit-svn): fixing missing LanguageString in test dataset for #2778. However, test
still fails. Andreas Müller
02:34 PM Revision 3a36d17c (cdmlib): fixing missing LanguageString in test dataset for #2778. However, test
still fails. Andreas Müller
01:07 PM Revision 5262dcd6 (cdmlib): test commit
Patrick Plitzner
01:07 PM Revision 24219 (edit-svn): test commit
Patrick Plitzner
12:30 PM Revision 957c3a5f (cdmlib): fix #4976 Titlecache for new vocabularies not filled correctly
Andreas Müller
09:04 AM Revision 24218 (edit-svn): typo
Andreas Kohlbecker

06/16/2015

06:05 PM Revision 24217 (edit-svn): only a test
Andreas Kohlbecker
06:05 PM Revision dbaef697 (cdmlib): only a test
Andreas Kohlbecker
06:05 PM Revision 4a226647 (cdmlib): only a test
Andreas Kohlbecker
06:05 PM Revision 24216 (edit-svn): only a test
Andreas Kohlbecker
06:00 PM Revision 24215 (edit-svn): only a test
Andreas Kohlbecker
06:00 PM Revision 57e02195 (cdm-server): only a test
Andreas Kohlbecker
06:00 PM Revision 24214 (edit-svn): only a test
Andreas Kohlbecker
06:00 PM Revision 2e0a922e (cdm-server): only a test
Andreas Kohlbecker
05:58 PM Revision 24213 (edit-svn): test file
Andreas Kohlbecker
05:57 PM Revision 24212 (edit-svn): test file
Andreas Kohlbecker
04:20 PM Revision 24211 (edit-svn): fix #4976 Titlecache for new vocabularies not filled correctly
Andreas Müller
04:20 PM Revision 53ec4369 (cdmlib): fix #4976 Titlecache for new vocabularies not filled correctly
Andreas Müller
04:16 PM Revision 24210 (edit-svn): minor cleanup
Andreas Müller
04:16 PM Revision 97ecfa0d (cdmlib): minor cleanup
Andreas Müller
04:14 PM Revision 92b1e8d1 (cdmlib): minor cleanup
Andreas Müller
04:14 PM Revision 24209 (edit-svn): minor cleanup
Andreas Müller
02:04 PM Revision d24b444b (taxeditor): Merge branch 'develop' of ssh://dev.e-taxonomy.eu/var/git/taxedito...
Patrick Plitzner
02:04 PM Revision 24208 (edit-svn): Merge branch 'develop' of ssh://dev.e-taxonomy.eu/var/git/taxeditor in...
Patrick Plitzner
01:53 PM Revision 24207 (edit-svn): - added transient service methods
Patrick Plitzner
01:53 PM Revision 24206 (edit-svn): fixing for compatibility with merged cdmlib
Cherian Mathew
01:53 PM Revision d84f59dd (taxeditor): fixing for compatibility with merged cdmlib
Cherian Mathew
10:24 AM Revision 35bff1e0 (taxeditor): removing properties file from repo
Cherian Mathew
10:18 AM Revision e70b1617 (taxeditor): eu.etaxonomy.taxeditor.cdmlib/.classpath,MANIFEST.MF : removed cdm...
OperationTestBase, TaxonNameEditorTest, : refactoring
MockConversationEnabled : class to mock interface IConversatio...
Cherian Mathew

06/15/2015

04:21 PM Revision 63c9393a (taxeditor): removed reference to cdm-server
Cherian Mathew
04:11 PM Revision 79e8baa5 (taxeditor): - added transient service methods
Patrick Plitzner
03:47 PM Revision 24205 (edit-svn): add empty folder
Andreas Müller
03:47 PM Revision 122836c3 (taxeditor): add empty folder
Andreas Müller
03:44 PM Revision 24204 (edit-svn): merging test file from remote master
Cherian Mathew
03:44 PM Revision 6210ec4b (cdmlib): merging test file from remote master
Cherian Mathew
03:08 PM Revision 19333d7c (taxeditor): - fixed order of team members #4936
Patrick Plitzner
03:08 PM Revision 24202 (edit-svn): correcting wrong merge
Cherian Mathew
03:08 PM Revision 24200 (edit-svn): Merge branch 'master' of wp5.e-taxonomy.eu:/var/git/cdmlib
Cherian Mathew
03:08 PM Revision 24199 (edit-svn): - fixed order of team members #4936
Patrick Plitzner
03:08 PM Revision 24201 (edit-svn): pushing delete to end of method to fix problem with merge
Cherian Mathew
03:08 PM Revision 24203 (edit-svn): DescriptionServiceImpl : added dao delete of description
OccurrenceServiceDeepDeleteTest : removed extra delete call
TaxonServiceImplTest : added testing of taxon.removeDescr...
Cherian Mathew
02:57 PM Revision c2235141 (cdmlib): pushing delete to end of method to fix problem with merge
Cherian Mathew
02:57 PM Revision 645129f4 (cdmlib): DescriptionServiceImpl : added dao delete of description
OccurrenceServiceDeepDeleteTest : removed extra delete call
TaxonServiceImplTest : added testing of taxon.removeDescr...
Cherian Mathew
02:57 PM Revision 95d79544 (cdmlib): correcting wrong merge
Cherian Mathew
02:47 PM Revision 0849a0f4 (cdmlib): Merge branch 'master' of wp5.e-taxonomy.eu:/var/git/cdmlib
Cherian Mathew
02:31 PM Revision 2d308c81 (taxeditor): - fixed NPE (#4937)
Patrick Plitzner
02:31 PM Revision 24198 (edit-svn): - fixed NPE (#4937)
Patrick Plitzner
02:09 PM Revision 24197 (edit-svn): implementing modifications requested in #2880
Andreas Kohlbecker
02:09 PM Revision 3191afdc (cdmlib): implementing modifications requested in #2880
Andreas Kohlbecker
02:03 PM Revision 24196 (edit-svn): removing unused web service url constant
Andreas Kohlbecker
02:03 PM Revision 91029fdf (cdm-dataportal): removing unused web service url constant
Andreas Kohlbecker
01:36 PM Revision 9df1cbb4 (cdmlib): - correctly cleaned up between test invocations
Patrick Plitzner
01:36 PM Revision 24195 (edit-svn): - removed inBetween target for Derivative Editor (fixes #4966)
Patrick Plitzner
01:36 PM Revision 24194 (edit-svn): - correctly cleaned up between test invocations
Patrick Plitzner
01:33 PM Revision fe2289e3 (cdmlib): - added missing table column to test DB
Patrick Plitzner
01:33 PM Revision 24193 (edit-svn): - added missing table column to test DB
Patrick Plitzner
12:46 PM Revision d4770c1f (taxeditor): - removed inBetween target for Derivative Editor (fixes #4966)
Patrick Plitzner
12:23 PM Revision 6dca0c72 (cdmlib): implementing test to reproduce issue #2778 - the test runs succesfull...
Andreas Kohlbecker
12:23 PM Revision 24192 (edit-svn): implementing test to reproduce issue #2778 - the test runs succesfully...
Andreas Kohlbecker
12:20 PM Revision b390d5fb (cdmlib): providing a example implementation of createTestDataSet()
Andreas Kohlbecker
12:20 PM Revision 24191 (edit-svn): providing a example implementation of createTestDataSet()
Andreas Kohlbecker
10:52 AM Revision 24190 (edit-svn): Icons added for insert/overwrite button in AlignmentEditor tool bar.
Insert left/right in pherogram disabled when switching to overwrite mode. Ben Stöver
10:52 AM Revision 169640eb (taxeditor): Icons added for insert/overwrite button in AlignmentEditor tool bar.
Insert left/right in pherogram disabled when switching to overwrite mode. Ben Stöver
09:56 AM Revision 70f4317c (taxeditor): - removed test folder
Patrick Plitzner
09:56 AM Revision 24189 (edit-svn): - removed test folder
Patrick Plitzner
09:49 AM Revision 24188 (edit-svn): Merge branch 'develop' of https://dev.e-taxonomy.eu/git/taxeditor into...
Patrick Plitzner
09:49 AM Revision 697258f0 (taxeditor): Merge branch 'develop' of https://dev.e-taxonomy.eu/git/taxeditor ...
Patrick Plitzner
09:46 AM Revision 66710185 (taxeditor): - removed test folder from classpatch
pplitzner
09:46 AM Revision 24187 (edit-svn): - removed test folder from classpatch
pplitzner
09:05 AM Revision 24186 (edit-svn): - added test for "ignoreAuthorship" option
Patrick Plitzner
09:05 AM Revision e5154356 (cdmlib): - added test for "ignoreAuthorship" option
Patrick Plitzner
09:05 AM Revision 24185 (edit-svn): - text formatting
Patrick Plitzner
09:05 AM Revision beba0b4b (cdmlib): - text formatting
Patrick Plitzner
09:04 AM Revision 45b5cb33 (cdmlib): - re-enabled dna quality parsing
Patrick Plitzner
09:04 AM Revision 24184 (edit-svn): - re-enabled dna quality parsing
Patrick Plitzner

06/14/2015

03:17 PM Revision 24183 (edit-svn): Adjustments to recent changes in LibrAlign.
Ben Stöver
03:17 PM Revision dda239c0 (taxeditor): Adjustments to recent changes in LibrAlign.
Ben Stöver

06/12/2015

06:36 PM Revision 24182 (edit-svn): Option to switch on/off Taxon profile picture placeholder - #3470
Andreas Kohlbecker
06:36 PM Revision ca47ea76 (cdm-dataportal): Option to switch on/off Taxon profile picture placeholder - #...
Andreas Kohlbecker
05:39 PM Revision 24180 (edit-svn): pushing delete to end of method to fix problem with merge
Cherian Mathew
05:39 PM Revision 24181 (edit-svn): fix umlaute in key menus and add gitignore for rcp.target
Andreas Müller
05:39 PM Revision 5975c6e4 (cdmlib): pushing delete to end of method to fix problem with merge
Cherian Mathew
05:37 PM Revision 6f838c04 (taxeditor): fix umlaute in key menus and add gitignore for rcp.target
Andreas Müller
03:01 PM Revision 24179 (edit-svn): Tag '/tags/cdmlib/3.6.2' created from /trunk/cdmlib:24167
Andreas Kohlbecker
03:01 PM Revision 5c781bd3 (taxeditor): BaseRemotingTest, RemotingSessionAwareTest : made abstract since t...
CdmEntitySessionManagerTest (.xml) : fixed test data Cherian Mathew
03:01 PM Revision 24178 (edit-svn): BaseRemotingTest, RemotingSessionAwareTest : made abstract since there...
CdmEntitySessionManagerTest (.xml) : fixed test data Cherian Mathew
02:29 PM Revision df390232 (taxeditor): RemotingSessionAwareTest : added new class which handles pre-confi...
*Test.java : set super class to RemotingSessionAwareTest
*.xml : removed DefinedTermBase entites from datasets so tha...
Cherian Mathew
02:29 PM Revision 24177 (edit-svn): RemotingSessionAwareTest : added new class which handles pre-config of...
*Test.java : set super class to RemotingSessionAwareTest
*.xml : removed DefinedTermBase entites from datasets so tha...
Cherian Mathew
12:50 PM Revision 73ec4722 (cdmlib): Merge branch 'master' of wp5.e-taxonomy.eu:/var/git/cdmlib into remot...
Conflicts:
cdmlib-services/src/main/java/eu/etaxonomy/cdm/api/service/TaxonNodeServiceImpl.java
Cherian Mathew
12:50 PM Revision 24176 (edit-svn): fixed issues with resource loading for maven int tests
Cherian Mathew
12:50 PM Revision 24174 (edit-svn): Merge branch 'master' of wp5.e-taxonomy.eu:/var/git/cdmlib into remoti...
Conflicts:
cdmlib-services/src/main/java/eu/etaxonomy/cdm/api/service/TaxonNodeServiceImpl.java
Cherian Mathew
12:50 PM Revision 24175 (edit-svn): corrected merge to latest snapshot version
updated hibernate config file and test db
setup testing framework with jetty and maven
Cherian Mathew
12:48 PM Revision 52c1b80c (cdmlib): reverting back last change
Cherian Mathew
12:48 PM Revision 24173 (edit-svn): reverting back last change
Cherian Mathew
12:26 PM Revision 24172 (edit-svn): CdmCacher : corrected initializing of default cache
defaultApplicationContext : replaced component scan of cache with specific bean initialization Cherian Mathew
12:26 PM Revision 6f79ba7b (cdmlib): CdmCacher : corrected initializing of default cache
defaultApplicationContext : replaced component scan of cache with specific bean initialization Cherian Mathew
10:36 AM Revision 24171 (edit-svn): fixing uuid for Achilla - #4983
Andreas Kohlbecker
10:36 AM Revision 76bbeb60 (cdm-dataportal): fixing uuid for Achilla - #4983
Andreas Kohlbecker

06/11/2015

05:50 PM Revision 115e458f (taxeditor): fixed issues with resource loading for maven int tests
Cherian Mathew
03:39 PM Revision 55a1a227 (taxeditor): Further adjustments to recent changes in LibrAlign.
Ben Stöver
03:39 PM Revision 24170 (edit-svn): implemented selenium test for PolytomousKeys #4983
Andreas Kohlbecker
03:39 PM Revision 24168 (edit-svn): Further adjustments to recent changes in LibrAlign.
Ben Stöver
03:39 PM Revision 24169 (edit-svn): Merge tag '3.6.0' into develop
tag for relase 3.6.0 Andreas Kohlbecker
03:38 PM Revision 3f140bb9 (cdm-dataportal): implemented selenium test for PolytomousKeys #4983
Andreas Kohlbecker
02:33 PM Revision f5a93446 (cdmlib): fixing bug in last commit regarding #4974 (AdvancedBeanInitializer ca...
Andreas Kohlbecker
02:33 PM Revision 24167 (edit-svn): fixing bug in last commit regarding #4974 (AdvancedBeanInitializer cau...
Andreas Kohlbecker
01:17 PM Revision 24166 (edit-svn): minor
Andreas Müller
01:17 PM Revision eea4ad97 (cdmlib-apps): minor
Andreas Müller
01:16 PM Revision 256d7534 (cdmlib): fixing #4974 (AdvancedBeanInitializer causes error with eu.etaxonomy....
Andreas Kohlbecker
01:16 PM Revision 24165 (edit-svn): fixing #4974 (AdvancedBeanInitializer causes error with eu.etaxonomy.c...
Andreas Kohlbecker
11:31 AM Revision 24164 (edit-svn): adapt csv export for caryophyllales
Katja Luther
11:31 AM Revision e147bff0 (cdmlib): adapt csv export for caryophyllales
Katja Luther
10:50 AM Revision 608f7100 (taxeditor): corrected merge to latest snapshot version
updated hibernate config file and test db
setup testing framework with jetty and maven
Cherian Mathew

06/10/2015

05:04 PM Revision b3842d63 (cdm-server): Merge branch 'master' into develop
Andreas Kohlbecker
05:04 PM Revision c94e798b (cdm-server): updating develop poms to master versions to avoid merge conflicts
Andreas Kohlbecker
05:04 PM Revision b75202ab (cdm-server): Updating develop poms back to pre merge state
Andreas Kohlbecker
05:04 PM Revision 3b0e0aee (cdm-server): Merge branch 'release/3.6.1'
Andreas Kohlbecker
05:03 PM Revision cb75150e (cdm-server): no deploy since this is only a test
Andreas Kohlbecker
02:55 PM Revision 0a974916 (cdm-server): pinning cdm-webapp version to 3.6.0 for testing only
Andreas Kohlbecker
02:00 PM Revision d6a1dad2 (cdm-server): updating poms for branch'release/3.6.1' with non-snapshot versions
Andreas Kohlbecker
01:59 PM feature request #4766: Repair Methods for the cdm instance
we may also integrate this as a validation rule -> #4981
Andreas Müller
01:57 PM Revision aa2c0090 (cdm-server): cleaning up the pom.xml
Andreas Kohlbecker
01:57 PM Revision c7a06725 (cdm-server): updating poms for 3.6.2-SNAPSHOT development
Andreas Kohlbecker
01:47 PM Revision 096415c0 (cdm-server): replacing maven-release plugin with jgitflow-maven-plugin
Andreas Kohlbecker

06/09/2015

04:46 PM Revision 24163 (edit-svn): minor
Andreas Müller
04:46 PM Revision 6837a06b (cdmlib): minor
Andreas Müller
04:13 PM Revision 24162 (edit-svn): - added test to ignore because data base conflicts for later tests
Patrick Plitzner
04:13 PM Revision e42918a8 (cdmlib): - added test to ignore because data base conflicts for later tests
Patrick Plitzner
04:06 PM Revision 1f0572cb (cdmlib-apps): updated BgmbInstancesUpdater
Andreas Müller
04:06 PM Revision 24161 (edit-svn): updated BgmbInstancesUpdater
Andreas Müller
03:59 PM Revision a72ff755 (cdmlib): - added test to ignore because data base conflicts for later tests
Patrick Plitzner
03:59 PM Revision 24160 (edit-svn): - added test to ignore because data base conflicts for later tests
Patrick Plitzner
02:34 PM feature request #2711: Proper handling of cdm webservice HTTP status codes
see also [#4977#note-4]
in case of errors in the search web service the result says "No matching entries found". It ...
Andreas Kohlbecker
02:23 PM Revision 24159 (edit-svn): - cleanup DB after test run
Patrick Plitzner
02:23 PM Revision fe646ea5 (cdmlib): - cleanup DB after test run
Patrick Plitzner
02:04 PM Revision 24158 (edit-svn): in preparation for ticket #4950
Katja Luther
02:04 PM Revision 29dfb224 (cdmlib-apps): in preparation for ticket #4950
Katja Luther
01:55 PM Revision 58696fe1 (cdmlib-apps): latest FM activator changes
Andreas Müller
01:55 PM Revision 24157 (edit-svn): latest FM activator changes
Andreas Müller
01:54 PM Revision 24156 (edit-svn): latest FotG activator changes
Andreas Müller
01:54 PM Revision 0a4c0a67 (cdmlib-apps): latest FotG activator changes
Andreas Müller
01:36 PM Revision 24155 (edit-svn): hotfix
Andreas Kohlbecker
01:20 PM Revision d2ca4afe (cdm-dataportal): fixing #4977: advanced search with distribution filter is broken
Andreas Kohlbecker
01:20 PM Revision 24154 (edit-svn): fixing #4977: advanced search with distribution filter is broken
Andreas Kohlbecker
12:57 PM bug #4965 (In Progress): unsupported method getDatabase() in WrappedCdmDataSource breaks forceSch...
This solution probably works only with [[MySQL]] but we should support at least all supported database types.
I jus...
Andreas Müller
12:22 PM bug #4965 (Resolved): unsupported method getDatabase() in WrappedCdmDataSource breaks forceSchema...
r24150 : implementing getDatabase() in WrappedCdmDataSource for `ComboPooledDataSource`
this allows us to use the ...
Andreas Kohlbecker
12:52 PM Revision 56e63c4b (cdmlib): minor
Andreas Müller
12:52 PM Revision 24153 (edit-svn): minor
Andreas Müller
12:51 PM Revision 8e4c4d7c (cdmlib): add override
Andreas Müller
12:51 PM Revision 24152 (edit-svn): add override
Andreas Müller
12:19 PM Revision 7fa91bbc (cdmlib): disabling sql tracing in logs
Andreas Kohlbecker
12:19 PM Revision 24151 (edit-svn): disabling sql tracing in logs
Andreas Kohlbecker
12:18 PM Revision 0357b240 (cdmlib): fixing #4965 unsupported method getDatabase() in WrappedCdmDataSource...
Andreas Kohlbecker
12:18 PM Revision 24150 (edit-svn): fixing #4965 unsupported method getDatabase() in WrappedCdmDataSource ...
Andreas Kohlbecker
09:40 AM Revision 24149 (edit-svn): - added more ggbn ABCD parameters to import and test
Patrick Plitzner
09:40 AM Revision db49def5 (cdmlib): - added more ggbn ABCD parameters to import and test
Patrick Plitzner
09:32 AM Revision c5485129 (taxeditor): fixed classpath issues and issues from last merge
Cherian Mathew
09:32 AM Revision 24148 (edit-svn): fixed classpath issues and issues from last merge
Cherian Mathew
09:22 AM Revision 902d7875 (taxeditor): changed output dir to classes
Cherian Mathew
 

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