Activity
From 05/10/2015 to 06/08/2015
06/08/2015
- 04:50 PM Revision 76543dac (taxeditor): Adjustments to recent changes in LibrAlign.
- 03:04 PM feature request #4257 (In Progress): specimen map should zoom to area of distribution
- 01:57 PM Revision 45ab0adb (taxeditor): merge-update from trunk
- 01:52 PM Revision e479cceb (cdm-server): Merge branch 'master' of wp5.e-taxonomy.eu:/var/git/cdm-server into ticket-4963
- 01:46 PM Revision 91a93eb2 (taxeditor): merge-update from trunk
- 01:18 PM Revision e7c0aec6 (cdmlib): corrected duplicate methods and unimplemented method issue
- 01:08 PM Revision 1f478638 (cdmlib): Merge branch 'master' of wp5.e-taxonomy.eu:/var/git/cdmlib into remoting-4.0
- Conflicts:
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/common/DefinedTerm.java
cdmlib-model/src/main/java/eu/... - 01:00 PM Revision efedd195 (taxeditor): fixed manifest versions
- 12:22 PM Revision 439d94c3 (taxeditor): new .gitignore file
- 12:20 PM Revision 7b2caa7b (taxeditor): removed test source from classpath
- 12:13 PM Revision 9ee1c500 (taxeditor): fixed update to snapshot
- 12:06 PM bug #4583 (In Progress): zoological names with book as nomref shown with undesirable comma
- 10:28 AM Revision f407988d (cdmlib): - added more parameters to GGBN parser and test
- 10:26 AM Revision 36ea2506 (taxeditor): corrected cdmlib version to snapshot
06/05/2015
- 07:02 PM Revision b5e6cf2c (taxeditor): fixed manifest problems
- 06:41 PM Revision 29ca3039 (taxeditor): Updated version in pom / project files to taxeditor version : 3.6.1 and cdmlib version : 3.6.1
- 06:41 PM Revision 3179bf34 (taxeditor): Updated version in pom / project files to taxeditor version : 3.6.2-SNAPSHOT and cdmlib version : 3.6.1
- 06:16 PM Revision e8458b29 (taxeditor): Updating develop poms back to pre merge state
- 06:16 PM Revision 6ae694db (taxeditor): Merge branch 'master' into develop
- 06:16 PM Revision c91fa0aa (taxeditor): Updating develop poms to hotfix version to avoid merge conflicts
- 06:16 PM Revision 7e5b1513 (taxeditor): Merge branch 'hotfix/3.6.1'
- 06:16 PM Revision 0c924c07 (taxeditor): updating poms for branch'hotfix/3.6.1' with non-snapshot versions
- 06:15 PM Revision e51599a4 (taxeditor): version updates for 3.6.1
- 05:55 PM Revision dba3d0c2 (taxeditor): updating poms for branch '3.6.1' with snapshot versions
- 05:53 PM Revision 491389ea (taxeditor): fixing classpath config
- 05:51 PM Revision 1925ef97 (taxeditor): fixing classpath config
- 05:14 PM Revision 6b8f90ae (cdmlib): - added more ggbn parameters
- 04:42 PM Revision 5b9d4ad5 (taxeditor): Release 3.6.0 merge
- 04:31 PM Revision bf33700a (taxeditor): merged jgitfow plugin
- 04:12 PM Revision 77e0343c (taxeditor): merged for gitflow plugin
- 04:07 PM Revision ea69c633 (taxeditor): added jgitflow plugin
- 03:20 PM bug #4821: Changing order of terms not possible
- When moving a term the predecessor term is completely removed from the vocabulary on my machine (windows using releas...
- 02:54 PM Revision 005c8e49 (cdmlib): define default sort mode #4226
- 02:38 PM bug #4965: unsupported method getDatabase() in WrappedCdmDataSource breaks forceSchemaUpdate
- you can use
~~~
((ComboPooledDataSource)dataSource).getJdbcUrl();
~~~
to get the jdbc url from which you can read t... - 02:36 PM Revision 15c13570 (cdmlib): Adapt enum names for NodeSortMode #4226
- 02:35 PM Revision e7ad3f52 (cdmlib): minor
- 02:30 PM Revision 729b01b5 (cdmlib-apps): remove obsolet import source
- 02:28 PM Revision a1f20d24 (cdmlib-apps): update BgbmInstancesUpdater
- 02:22 PM Revision b3a6b8c4 (cdm-dataportal): Merge tag '3.6.0' into develop
- tag for relase 3.6.0
- 02:21 PM Revision 9eb2aad2 (cdm-dataportal): Merge branch 'release/3.6.0'
- 01:23 PM Revision 43c0aada (taxeditor): Merge branch 'master' of wp5.e-taxonomy.eu:/var/git/taxeditor into remoting-4.0
- Conflicts:
.gitattributes
eu.etaxonomy.taxeditor.cdmlib/.classpath
eu.etaxonomy.taxeditor.cdmlib/META-INF/MANIFEST... - 12:13 PM Revision 39c0adc4 (cdm-webapp): added clean up before anything is done
- 09:52 AM Revision f56be808 (cdm-webapp): added dependencies for cdmlib-remote-webapp and cdm-vaadin wars
- 09:17 AM Revision 26ac0eb0 (cdm-webapp): updated version to snapshot
06/04/2015
- 06:43 PM Revision 208b2a3b (taxeditor): - updating versions due to release
- 05:44 PM Revision bee3aaa1 (cdm-server): corrected to add all depdendent modules
- 05:14 PM Revision 6eb43476 (cdm-server): correction for last commit
- 05:12 PM Revision 7d491f72 (cdm-server): pom.xml, base-assembly.xml : added assembly execution and install config for cdm-server-base jar
- Bootloader : allowing option for server to not join thread pool
- 04:30 PM Revision 73e6db00 (cdmlib): minor
- 04:26 PM Revision dbdcbbba (cdmlib): hotfix for MN_Table_Remover
- 04:25 PM Revision 2222043f (cdmlib): improve handling of substeps in update scripts (immediately stop updating if one step fails)
- 04:24 PM Revision 5515800d (cdmlib): hotfix for SchemaUpdater_35_36
- 03:55 PM Revision 5f02ad3e (taxeditor): updated to snapshot version
- Merge branch 'master' of wp5.e-taxonomy.eu:/var/git/taxeditor into develop
Conflicts:
eu.etaxonomy.taxeditor.cdmlib... - 03:49 PM Revision 86d2e9c2 (taxeditor): Snapshot branch for version 3.6.1-SNAPSHOT
- 03:49 PM Revision 02176688 (taxeditor): Updated version in config files to 3.6.1-SNAPSHOT
- 03:30 PM Revision afd232b8 (taxeditor): Merge branch 'move-to-luna' of wp5.e-taxonomy.eu:/var/git/taxeditor into develop
- Conflicts:
eu.etaxonomy.taxeditor.cdmlib/.classpath - 03:12 PM Revision e92eba73 (cdm-server): [maven-release-plugin] prepare for next development iteration
- 03:12 PM Revision 96a16894 (cdm-server): [maven-release-plugin] prepare release cdm-server-3.6.0
- 03:10 PM Revision 4fda59c0 (cdm-webapp): Merge tag '3.6.0' into develop
- release 3.6.0
- 03:09 PM Revision 30129cf6 (cdm-webapp): Merge branch 'release/3.6.0'
- 03:09 PM Revision 198f58f3 (cdm-webapp): Merge branch 'master' of wp5.e-taxonomy.eu:/var/git/cdm-webapp
- 03:08 PM Revision 9f8b9ba4 (cdm-webapp): updated versions to 3.6.0
- 03:07 PM Revision 9cd0b469 (cdm-webapp): Merge branch 'develop' of wp5.e-taxonomy.eu:/var/git/cdm-webapp into develop
- 02:58 PM Revision ebd5e5e5 (taxeditor): Updated version in config files to 3.6.0
- 02:49 PM Revision 50dbb584 (cdm-webapp): Merge tag '3.6.0' into develop
- merging pom with release version
- 02:48 PM Revision 074d3eb3 (cdm-webapp): Merge branch 'release/3.6.0'
- 02:47 PM Revision 96599cfa (cdm-webapp): updated cdmlib-webapp / vaadin versions to 3.6.0
- 02:47 PM Revision 9a6436df (cdmlib-apps): adapt eFlora and pesi pom to new version
- 02:44 PM Revision 5c12e29b (cdmlib-apps): adapt app-import pom to new version
- 02:42 PM Revision f3ef4498 (cdm-vaadin): set version to 3.6.1-SNAPSHOT
- 02:41 PM Revision d9ccb543 (cdm-vaadin): updating develop poms to master versions to avoid merge conflicts
- 02:41 PM Revision 18658a51 (cdm-vaadin): Merge branch 'release/3.6.0'
- 02:39 PM Revision e48b83e2 (cdm-vaadin): updating poms for branch'release/3.6.0' with non-snapshot versions
- 02:36 PM Revision 327f153f (cdm-vaadin): set cdmlib version to 3.6.0
- 02:25 PM Revision d820c505 (cdm-vaadin): Updated cdmlib version in pom of develop branch to 3.5.3-SNAPSHOT
- 02:25 PM Revision 057cb03c (cdm-vaadin): updating poms for branch '3.6.0' with snapshot versions
- 02:25 PM Revision 98545c49 (cdm-vaadin): updating poms for 3.6.1-SNAPSHOT development
- 02:25 PM Revision 635a28bf (cdm-vaadin): Changed project version to 3.6.0-SNAPSHOT
- 02:20 PM Revision 37c5915e (cdm-vaadin): updated test db for new model changes and updated test data accordingly
- 02:03 PM Revision 62fe983b (cdmlib): merge trunk to model 3.7
- 01:42 PM Revision fe8e39ef (cdmlib): [maven-release-plugin] prepare for next development iteration
- 01:42 PM Revision 4265a136 (cdmlib): [maven-release-plugin] prepare release cdmlib-parent-3.6.0
- 01:42 PM Revision b58ee1b1 (cdmlib): Create cdm 3.7 branch
- 01:23 PM Revision a7821cf5 (taxeditor): - added wizard page listener to react on ENTER key #4853
- 01:04 PM Revision 67a0eae3 (cdm-vaadin): merged from master
- 12:57 PM Revision 750c0b1b (taxeditor): - added wizard page listener to react on ENTER key #4853
- 12:54 PM Revision e382ff8f (taxeditor): - added context menu entry for editing classifications
- - used generic extension point for cdmViewer in navigation project (#4865)
- 12:52 PM Revision a903bbc0 (taxeditor): - code conventions
- 12:50 PM Revision e36729b8 (taxeditor): - code conventions
- 12:45 PM Revision ccebc97c (cdmlib): change order of update steps
- 11:42 AM Revision 7b864eca (cdm-vaadin): updated to latest model changes
- 11:39 AM Revision 39edebc5 (taxeditor): minor
- 11:33 AM Revision d3d5a408 (cdmlib): fix team cache strategy, add et al. if hasMoreMembers is set
- 11:09 AM Revision cc1489e6 (taxeditor): add checkbox for additional team members
- 12:33 AM bug #4965: unsupported method getDatabase() in WrappedCdmDataSource breaks forceSchemaUpdate
- Replying to [[comment1|a.kohlbecker]]:
> databases are broken after an update failed like this.
yes, it is a known...
06/03/2015
- 07:44 PM Revision 0aa17553 (cdmlib): fix caseType bug for IndexDropper #4843
- 07:26 PM bug #4965: unsupported method getDatabase() in WrappedCdmDataSource breaks forceSchemaUpdate
- the problem is that java.util.Datasource does not bring any information about the database schema/catalog it connects...
- 05:29 PM bug #4965: unsupported method getDatabase() in WrappedCdmDataSource breaks forceSchemaUpdate
- databases are broken after an update failed like this.
- 05:27 PM bug #4965 (Closed): unsupported method getDatabase() in WrappedCdmDataSource breaks forceSchemaUpdate
- ~~~
java.lang.UnsupportedOperationException: getDatabase() not supported by WrappedCdmDataSource
at eu.etaxonomy.c... - 06:56 PM Revision f965a55a (cdmlib): update cdmlib-remote-webapp test h2 to model 3.6
- 05:20 PM Revision 39525551 (cdmlib): fixing broken image in swagger-ui
- 04:32 PM Revision ec3d0059 (cdm-server): fixing bug for situation when CONTEXT_PATH_PREFIX = / contributes to #4842
- 03:30 PM bug #4964 (Duplicate): footnotes for taxonRelationship sources and annotations should be rendered together
- the ordering of the footnotes on http://dev.e-taxonomy.eu/dataportal/rotelisten_flora_deutschland/cdm_dataportal/taxo...
- 03:22 PM Revision abb420f6 (taxeditor): change synonym to accepted taxon message when taxon could not be deleted
- 03:19 PM Revision 2a1140d9 (taxeditor): delete taxonnode if taxon is used somewhere else fixed
- 03:19 PM Revision 8fa95f69 (cdmlib): delete taxonnode if taxon is used somewhere else fixed
- 03:00 PM Revision e4977e33 (cdmlib): merge model changes 36 into trunk
- 02:56 PM Revision 623bebd7 (cdmlib): minor
- 02:56 PM Revision d0ed9d76 (cdmlib): merge trunk into branch 36
- 02:50 PM Revision 8827537f (taxeditor): removed unused config and added comments
- 02:48 PM Revision 4c3c3386 (cdmlib): merge trunk into 36 branch
- 02:38 PM Revision f6827fd7 (taxeditor): reset swtbot dependencies and set all swtbot tests to ignore for the moment
- 02:00 PM bug #4962 (Resolved): improve portal/classification/{taxon_uuid}/childNodesAt/{rank_uuid} web service
- the @portal/classification/{taxon_uuid}/childNodesAt/{rank_uuid} @-service is one of the slowest service endpoints.
... - 01:59 PM Revision b3523e34 (taxeditor): forgot to add in last commit
- 01:56 PM Revision 93b0eb6b (taxeditor): eu.etaxonomy.taxeditor.cdmlib/.classpath, eu.etaxonomy.taxeditor.cdmlib/META-INF/MANIFEST.MF, eu.etaxonomy.taxeditor.test/META-INF/MANIFEST.MF : moved test jars to test project
- eu.etaxonomy.taxeditor.cdmlib/META-INF/MANIFEST.MF : added packages required by test project to exported package list...
- 01:52 PM task #4009: consider using jackson as json library
- increasing severity and priority as this issue has shown to be last big culprit for bad performance in #4925
- 01:42 PM Revision 79444489 (taxeditor): moved reseources from src/main/resources to src/test/resources to be maven compliant
- 01:00 PM Revision 4b8eaa80 (cdmlib): jaxb annotation fixed for agentRelations #3583
- 01:00 PM Revision 840abdb1 (cdmlib): rename authorTeam -> authorship #4332 for name authors
- 11:36 AM Revision 8eaf6be2 (cdm-server): reporting the number of cores in the management gui - #4958
- 10:15 AM Revision 8cc7cc9a (cdm-dataportal): adapting the description to the new classification filter option - #4872
- 09:55 AM Revision 6eb13237 (taxeditor): #4725
- 12:30 AM Revision da2aed69 (cdmlib): Fix UniqueIndexDropper for PostGreSQL #4843
06/02/2015
- 02:51 PM Revision e2a62747 (taxeditor): minor
- 02:47 PM Revision 3124450d (cdmlib): merge trunk into 3.6 branch
- 02:43 PM Revision bb7cf1c5 (cdmlib): merge trunk into 3.6 branch
- 02:41 PM Revision 10f37905 (cdmlib): minor
- 02:39 PM Revision cbc56078 (cdmlib): minor
- 02:36 PM Revision 971c0943 (cdmlib): minor
- 02:33 PM Revision 442c5a7f (cdmlib): minor
- 02:32 PM Revision 5a57d0d6 (cdmlib): minor
- 02:32 PM Revision 7a3e3d56 (cdmlib): minor
- 02:25 PM Revision 9fa59539 (cdmlib): minor
- 02:24 PM Revision 815a9caa (cdmlib): Move FullCoverageDataGenerator from test to real, to avoid dependency problems.
- 02:14 PM Revision 02364271 (cdmlib): last changes for #4869
- 01:44 PM Revision 95b07aa3 (cdmlib): add SortMode enum and change the param for sorting of loadChildNodesOfTaxonNode from boolean to SortMode enum see #4226
- 01:07 PM Revision 54700bcb (cdmlib): performance improvement in AbstractBeanProcessor.getMergedExcludes(), avoids the merging of the collection each time the processBean() method is called, this can take place several 10 thousand times for one request - contributes to #4925
- 01:07 PM Revision 862d1cda (cdmlib): missing @Override
- 11:43 AM Revision 12df9e0e (taxeditor): fix for #3998
- 11:43 AM Revision 108dbf1a (cdmlib): changes for #3998
06/01/2015
- 06:25 PM bug #4957 (Closed): MS SQL Server not functional as it does not allow more than 2100 parameters
- ... for an SQL statement.
But e.g. the term loading uses >2100 parameters (all uuids) to load all managed data.
... - 05:57 PM Revision 6c478cf9 (taxeditor): updated version numbers
- 05:21 PM Revision 03c5ea3e (cdmlib): remove dependeny to test (FullDataCoverage...)
- 05:07 PM Revision abce4859 (taxeditor): CdmApplicationRemoteController : moved cdm model caching to start before application context init
- CdmApplicationRemoteConfiguration : moved bean initialization from autowiring to getBean in getters for better perfor...
- 04:54 PM Revision faf857ce (cdmlib): adapt FullCoverageData method
- 04:54 PM Revision d0f12c0a (cdmlib): fix setStatisticalValue method
- 04:53 PM Revision faa3e550 (cdmlib): minor
- 04:51 PM Revision b7f5730a (cdm-webapp): setting maven updatePolicy for snapshots to always and ignoring IDE project files
- 12:45 PM Revision ca3e00f4 (cdmlib): adding c3p0 as test dependency - contibution to #4955
- 12:06 PM Revision cbaa793a (cdmlib): excluding all jdbc drivers from the webapp - contribution to #4955
- 10:05 AM Revision d62b4abe (taxeditor): - fixed compile error and possible NPE #4810
- 10:05 AM Revision 2453e3d8 (cdmlib): - fixed compile error and possible NPE #4810
05/29/2015
- 06:33 PM Revision e138e599 (taxeditor): MANIFEST.MF : added apache commons exception package for use in messaging utils
- MessagingUtils : updated to add all causes in the child statuses
- 06:04 PM task #4303: [MASTER] Fauna Europaea Taxonomic Experts in the CDM [DISCUSS]
- we do now have TaxonNode-Agent Relation implemented in CDM (#3583), so we can now use them for Taxonomic specialists ...
- 05:59 PM Revision 3c4607e9 (cdmlib): fix test and add factory method #3583
- 05:43 PM Revision 1cf17f11 (cdmlib): some cleanup, renaming and a test for TaxonNodeAgentRelation #3583
- 05:13 PM Revision 63228380 (cdmlib): more getters/adders, update script, vocabulary and test vocabulary for TaxonNodeAgentRelation #3583
- 04:24 PM bug #4821 (Resolved): Changing order of terms not possible
- Added possibility to change order for ordered terms, disabled insert feedback for non ordered terms and added sorting...
- 04:21 PM Revision 13afddfb (taxeditor): Merge branch 'master' of wp5.e-taxonomy.eu:/var/git/taxeditor
- 04:16 PM Revision 872d7328 (taxeditor): DefinedTermDropAdapter : added selection of source objects after drop and disabled insert feedback for non OrderedTermBase objects
- DefinedTermEditor : added custom sorter for OrderedTermBase (descending)
MoveDefinedTermOperation : added possibility... - 02:50 PM Revision 2b296096 (cdmlib): first implementation of TaxonNodeAgentRelation #3583
- 02:49 PM Revision b25b282d (cdmlib): fix naming of ClassificationServiceDeepTest
- 02:23 PM Revision ab85ded9 (cdmlib): minor
- 02:22 PM Revision be4cf91a (cdmlib): minor cleanup
- 12:45 PM Revision 0d4ac2d3 (cdmlib): merge trunk to model 36
- 12:43 PM Revision b30997b8 (cdmlib): minor
- 11:23 AM Revision 7b121d03 (cdmlib): merging trunk into 3.6 branche
- 11:09 AM Revision 003b56d6 (cdmlib): minor
05/28/2015
- 03:43 PM bug #4945 (In Progress): Right click menu for polytomous key node list view needs correct enabling
- In the polytomous key node list view the following right click menu items are offered:
* New key number
* New A... - 03:05 PM bug #4944 (Closed): "Protected" indication for references needs to be improved
- There are some issues with the orange coloring which indicates that a cache is protected in the reference details vie...
- 02:08 PM Revision cfd56be9 (taxeditor): new session for every search in bulk editor
- 01:58 PM Revision 3f8ecdf1 (taxeditor): Improve error message
- 01:14 PM Revision 7509c9f3 (taxeditor): Merge branch 'master' of wp5.e-taxonomy.eu:/var/git/taxeditor
- 01:13 PM Revision 5eaf7c89 (taxeditor): replaced simple editor-datasource compatibility check with version comparison check
- 11:09 AM Revision c56aa276 (taxeditor): fixing the disabling of the ToggleableTextElement when the titlecache is protected.
- 11:07 AM Revision 3f76302e (cdmlib): delete method returns DeleteResult
- 10:45 AM Revision 961d67ac (taxeditor): added comment for sync get method call
- 10:41 AM Revision ef839dbf (cdmlib): fix for #4869
- 10:28 AM Revision e8d2f9e3 (taxeditor): fix potential NPE
- 10:20 AM Revision 8619530a (cdmlib): minor
- 10:20 AM Revision 0c1869fa (cdmlib): remove ExcelImportMapping.properties
05/27/2015
- 06:34 PM feature request #4908: adding convert Team to Person and Person to Team to the bulk editor
- If a person is to be transformed into a team but this is not possible the error dialog title says "Can not convert Te...
- 06:31 PM feature request #4908: adding convert Team to Person and Person to Team to the bulk editor
- I think it is enough to label the menu items "Convert to team" and "Convert to person". As we show the type in grey i...
- 06:25 PM feature request #4908: adding convert Team to Person and Person to Team to the bulk editor
- If an error occurs during convert only a popup appears saying that there was an error but even no stacktrace. We shou...
- 06:18 PM Revision 2296f512 (taxeditor): cleanup
- 06:10 PM Revision 50a7c607 (taxeditor): minor
- 06:09 PM Revision a77bbcb7 (taxeditor): clean up
- 05:54 PM Revision f4142aa7 (taxeditor): cdmlib-ehcache : removed disk based cache manager since the hb config is now cached in memory
- CdmApplicationRemoteController, CdmModelCacher, CdmRemoteCacheManager, CdmModelGetMethodCacherTest : running the hibe...
- 05:52 PM Revision a4f5eec1 (taxeditor): Renaming menu labels for new team and person
- 05:16 PM Revision 24236e79 (cdmlib): preliminary fix for not compiling UpdateResult
- 05:14 PM Revision c9e09d90 (cdmlib): minor
- 05:11 PM Revision 3965dc55 (taxeditor): use plural for bulk editor labels
- 05:00 PM Revision aa0e5426 (taxeditor): minor
- 04:53 PM Revision 2d1fb6dc (cdmlib): cleanup code
- 04:39 PM Revision c1b3fb1c (cdmlib): try to fix ignored test #3279
- 04:19 PM Revision e67e2853 (cdmlib): set failing test to ignore
- 04:14 PM feature request #4896: Bulkeditor: deduplication of objects of different type
- Mail Walter:
~~~
java.lang.IllegalArgumentException: Object can not be merged into new object as it is referenced i... - 02:10 PM Revision 168eb7b0 (cdmlib): - limited the amount of exceptions stored in a delete result #4810
- 02:09 PM Revision 1e37c04d (taxeditor): - fixed preferences for adding vocabulary name to term label #4448
- 02:07 PM Revision 95b6f6f5 (taxeditor): CdmApplicationRemoteController : refactoring code to simplify application context loading and making it performant
- CdmModelCacher : removed unused method
CdmRemoteCacheManager : moved cache from disk to memory
httpInvokerServiceClie... - 12:58 PM Revision 5ab41d0f (cdmlib): javadoc
- 12:51 PM Revision 7af4bdbe (cdmlib): clean up old AbcdImport test #3279
- 10:20 AM Revision a80117c1 (cdmlib): rename ABCD import tests
- 10:12 AM Revision eaf1e9fa (cdmlib): minor
- 09:12 AM Revision 64cd2572 (taxeditor): - added preferences for vocabulary names in term labels #4448
- 08:54 AM Revision 5a52b8a4 (taxeditor): - combo dropdowns intitially show an empty field which is now removed when selecting any other entry
- - added vocabulary information to term label #4448
05/26/2015
- 06:23 PM Revision b0b380aa (taxeditor): corrected app context generation
- 06:18 PM Revision 6548ea8a (taxeditor): - corrected recursive autowiring
- - changed application context loading to be more performant
- 06:03 PM Revision a82fe35b (cdmlib): minor cleanup
- 06:02 PM Revision 210c6921 (cdmlib): minor changes, renaming, code formatting, javadoc
- 05:57 PM Revision 305419d7 (cdmlib): adding test for term titleCache creation #3148
- 05:07 PM Revision b0d7867b (taxeditor): - removed empty element from combo dropdown #4448
- 04:06 PM Revision 6a60981e (cdmlib): minor
- 03:46 PM Revision 479c80d3 (cdmlib): improve handling of titlecache in terms #3148
- 03:07 PM Revision 3227e0ee (cdmlib): improve handling of titlecache in terms #3148
- 01:42 PM Revision 48d1a460 (taxeditor): moving UuidAndTitleCache from model to persistence (changes in Editor). #4799
- 01:40 PM Revision d26d6619 (cdmlib): moving UuidAndTitleCache from model to persistence. #4799
- 01:13 PM feature request #4935 (New): Enhance "Change Type" button for feature detail view
- currently it is possible to choose both "supports categorical data" and "supports quantitative data" for a feature, w...
- 12:52 PM Revision 7765e60d (taxeditor): - initially expand modifier section if modifiers exist #4448
- 12:40 PM Revision aeb557b1 (taxeditor): - moved OriginalLabel above sources #4776
- 12:38 PM Revision b433159f (taxeditor): - fixed copy&paste error #4799
- 11:40 AM Revision 8e4118ad (taxeditor): - refactored naming of modifier section #4448
- 11:30 AM Revision 360810ab (taxeditor): - fixed NPE (#4448)
- 11:19 AM Revision 51a53af5 (cdmlib): minor
- 11:17 AM Revision 6d60bf7f (cdmlib): change method name
- 10:59 AM Revision 4a5c5357 (taxeditor): - fixed NPE (#4883)
- 10:54 AM feature request #4931 (New): [Master] Fix Performance Issues
- This master ticket deals with all performance issues related with the move to remoting.
- 10:52 AM Revision f3d13ac5 (taxeditor): - added identifier section to specimen details view
- 10:51 AM feature request #4930 (New): Implement Tests for Bulk Editor
- This tickets deals with tests of operations (and combination of operations) related to the Bulk Editor
- 10:50 AM feature request #4929 (New): Implement Tests for Polytomous Key Node Editor
- This tickets deals with tests of operations (and combination of operations) related to the Polytomous Key Node Editor
- 10:28 AM Revision b856ff9a (taxeditor): - moved OriginalLabelData to specimen details section (#4776)
- 09:04 AM Revision 22cb6038 (taxeditor): - added id to entity selection dialogs (#4799)
- 08:41 AM Revision cd227aa4 (taxeditor): - adding of empty persons to teams via DetailsView is not possible anymore (#4913)
05/24/2015
- 11:20 PM Revision 02d9659c (cdmlib): option to skip json processing for debugging purposes, see #4925
- 10:51 PM Revision 099504b7 (cdmlib): reverting c3p0 version to 0.9.2, v 0.9.5 was causing problems in the server, so we better stay on the save side in the cdmlib
- 10:51 PM Revision b97885b2 (cdmlib): doumentation
- 10:51 PM Revision b1908a7b (cdmlib): upgrading c3p0 from 0.9.2 to 0.9.5
05/23/2015
- 10:59 PM Revision 0e83d3c3 (cdm-server): new launcher to start the cdmserver for profiling with yourkit
- 10:58 PM Revision d04845f5 (cdm-server): solving problem with duplicate c3p0 management beans after instance start and correctly destroying the c3p0 datasources after instance shutdown
- 10:56 PM Revision 33600f7c (cdm-server): suggesting furher investigation of problems with c3p0 0.9.5
05/22/2015
- 09:56 PM Revision a375171e (cdm-server): applying more config changes according to recommendations in the official c3p0 doc
- 09:38 PM Revision 87f6f730 (cdmlib): Simplify table structure for CategoricalData-StateData and and QuantitativeData_StatisticalMeasurementValue #4841 - fixing update script for MySQL
- 08:17 PM Revision 30e73f2c (cdm-server): further improvement by setting testConnectionOnCheckin = false, minPoolSize = 1 - effect verified by benchmarking on my laptop
- 07:10 PM Revision 9d61d919 (taxeditor): CacheLoader : added strict check in recurive loop for same (not only equal) objects
- EntityCacherDebugResult : removed deproxy of objects
ProxyUtils : refactoring
httpInvokerServiceClients.xml : correct... - 06:13 PM Revision affa144b (cdmlib): Simplify table structure for CategoricalData-StateData and and QuantitativeData_StatisticalMeasurementValue #4841
- 06:11 PM Revision c20d5dff (cdmlib): Simplify table structure for CategoricalData-StateData and and QuantitativeData_StatisticalMeasurementValue #4841
- 05:29 PM Revision 37c6a233 (cdmlib): fix tests for model 3.6
- 05:08 PM Revision 5cd0f64f (cdmlib): fix RegEx dot bugs in NonViralName RegExs
- 04:19 PM Revision 714acf5d (cdm-server): switching back to c3p0 0.9.2 and removing the explicit log4j setting to solve probelms with lost connetions in jndi
- 03:12 PM Revision 2d2992b8 (cdm-server): using the log4j.properties in user.home/.cdmLibrary/log4j.properties in the launcher
- 02:48 PM Revision 0e262da1 (cdmlib): minor
- 02:24 PM Revision 62f7f3cb (cdmlib): merge trunk into model change 3.6
- 02:21 PM Revision 9a1e9d18 (cdm-server): trying to avoid excessive connection testing and to quickly reduce the number of connections in the pools
- 02:00 PM Revision 677b2f78 (cdmlib): cleanup
- 01:53 PM Revision 69b690c4 (cdmlib): adapt nonViralNameParser to model changes
- 01:51 PM Revision 1e1f192e (cdmlib): updated NonViralNameParserImplTest
- 01:50 PM Revision b76356eb (cdmlib): update schemaUpdater35_36
- 01:49 PM Revision 4944449a (cdmlib): add MnTableRemover
- 01:49 PM Revision a5f70cef (cdmlib): cleanup
- 01:49 PM Revision d2b68476 (cdmlib): cleanup
- 01:48 PM Revision 3f2f14db (cdmlib): adapt ModelUpdate tester
- 12:54 PM Revision 1690288d (cdm-server): following 'Simple advice on Connection testing' : testConnectionOnCheckout = true
- 12:54 PM Revision a1cc2b28 (cdm-server): upgrading c3p0 from 0.9.2 to 0.9.5
- 12:54 PM Revision 3452f94a (cdm-server): modifications to the eclipse launcher
- 11:37 AM Revision 8ab62f50 (taxeditor): fixed problems with new classes in merge
- 11:25 AM Revision d61bbb8b (taxeditor): fixed problems with merge
- 10:54 AM Revision 4b94c9cf (taxeditor): Merge branch 'move-to-luna' into remoting-4.0
- Conflicts:
eu.etaxonomy.taxeditor.cdmlib/.classpath
eu.etaxonomy.taxeditor.cdmlib/META-INF/MANIFEST.MF
eu.etaxonom...
05/21/2015
- 06:51 PM Revision 64993970 (taxeditor): removed test dir as source dir
- 06:45 PM Revision eb582aa5 (taxeditor): Adjustments to recent changes in LibrAlign.
- 05:00 PM Revision 8ee01de1 (cdmlib): Merge branch 'master' of wp5.e-taxonomy.eu:/var/git/cdmlib into remoting-4.0
- Conflicts:
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/common/DefinedTerm.java
cdmlib-model/src/main/java/eu/... - 04:36 PM Revision 7d7355ba (cdmlib): integrate parameters into constructor for updaters
- 04:23 PM Revision 192738d6 (cdmlib): added dirs and files to ignore
- 03:16 PM Revision a0971723 (taxeditor): Merge branch 'master' of wp5.e-taxonomy.eu:/var/git/taxeditor
- 03:16 PM Revision 4db8d201 (taxeditor): corrected visibility check for edit authorities editor
- 03:07 PM Revision 010eb02b (taxeditor): corrected visibility check for edit authorities editor
- 02:44 PM Revision 6934abd6 (taxeditor): fix UTF-8 issue in menu label
- 01:50 PM bug #3098 (Resolved): CdmPermissionEvaluator can test for multiple permissions
- is this still an open issue?
- 01:50 PM Revision a41fa7f7 (taxeditor): MANIFEST.MF, feature.xml : removed dependency on specific versions
- rcp.target : added vm arguments
- 01:36 PM feature request #4922 (New): GrantedAuthorities not reusable anymore
- Currently granted authorities are reusable. We want to make them group/user specific. Whenever a GA is removed from i...
- 11:59 AM Revision cd488e9d (taxeditor): corrected target definition
- 11:33 AM Revision 0fe7b5fe (taxeditor): Merge remote-tracking branch 'origin/master' into move-to-luna
05/20/2015
- 07:35 PM Revision 33523106 (taxeditor): added id to uuidAndTitleCache fixes in TaxEditor #4799
- 07:17 PM Revision 551dd959 (taxeditor): changed nebula update site to the stable release url
- 07:16 PM Revision e1f2a065 (taxeditor): dependency changes to move to e4
- 05:39 PM Revision ccb3c146 (cdmlib): added id to uuidAndTitleCache #4799 (bugfix)
- 05:23 PM Revision a15c158c (cdmlib): added id to uuidAndTitleCache
- 04:42 PM bug #4919: improve AdvancedBeanInitializer
- fixing problem with missing autoinitialization of titleCaches: r23866
- 01:12 PM bug #4919: improve AdvancedBeanInitializer
- improvements by solving 1. autoinitialization of Collection items :
* 72b0ad09b r23851
related bugfixes:
* git:... - 11:41 AM bug #4919 (New): improve AdvancedBeanInitializer
- The AdvancedBeanInitializer needs improvements:
1. autoinitialization of Collection items in case of `bean.colle... - 04:38 PM Revision ff8a5e4a (cdmlib): increasing the permGenSpace in the eclipse launcher
- 04:38 PM Revision 2e592aaa (cdmlib): fixing problem with missing autinitialization of titleCaches, contributes to #4919
- 04:26 PM Revision 3fa7e3fe (taxeditor)
- 04:05 PM Revision 1cd65199 (taxeditor): .classpath, MANIFEST.MF, build.properties, pom.xml : added cdm-server jar to lib dir and project classpath
- /lib : added ignore for cdm-server jar
CacheLoader : reverted update of cached entity field
cdmlib-remote-webapp.war ... - 03:45 PM bug #4915: Abbrev title for person should never be orange
- It is true, that if long and abbreviated forms exist these 2 forms always are the fallback if no real atomized data e...
- 02:39 PM bug #4915: Abbrev title for person should never be orange
- the abbrev title is used for the titleCache if no lastname is available so if the cachestrategy is correct the orange...
- 02:46 PM Revision d14dd820 (cdmlib): AnnotatableEntity : removed dynamic generation of marker set
- Taxon : reverted
TaxonServiceImpl : added affected object on delete - 02:31 PM Revision d81d2ff3 (taxeditor): corrected usage of service calls returning update/delete result objects
- 02:24 PM Revision c9285745 (taxeditor): InspectSessionsDialog : added filtering
- CdmStore : clearing caches and session before connecting
ParseHandler : using NonViralName instead of TaxonNameBase
A... - 02:16 PM Revision f399aa02 (taxeditor): corrected / moved existing tests
- 02:12 PM Revision d175d20f (taxeditor): added cdm entitysession enabled objects to operations
- 02:03 PM Revision 207d5d50 (cdmlib): - implemented importing of DNA ABCD units
- - DNA sampled will be attached to already existing specimens
- re-enabled tests - 02:00 PM Revision 56200bd1 (taxeditor): CdmTransientEntityCacher : adding cache to default cache manager
- EntityCacherDebugResult : corrections
cdmlib-remote-webapp.war : new version - 01:23 PM task #4911: improve performance of distributionInfoFor service
- improvments implemented:
* r23851, r23844, r23840,
See also the related improvements made at the AdvancedBeanIni... - 11:28 AM task #4911 (In Progress): improve performance of distributionInfoFor service
- 01:11 PM Revision d220174c (cdm-server): changed references of cdmlib-remote-webapp to cdm-webapp
- 01:05 PM Revision c9b5f651 (cdmlib): sloving NPE in AdvancedBeanInitializer
- 12:59 PM Revision 0ef168b6 (taxeditor): #4907 create in agent bulkeditor has no effect
- 11:27 AM Revision 824e1221 (cdmlib): fixing bug related to generic types
05/19/2015
- 05:05 PM Revision 7d3d8eab (taxeditor): remove syso
- 05:00 PM bug #4915 (Closed): Abbrev title for person should never be orange
- the abbreviated title of a person should never become orange as it is not a cache field. However it sometimes becomes...
- 04:54 PM Revision 72b0ad09 (cdmlib): further performance improvements: - better autoinitialization of collection items, - fixing bug in AdvancedBeanInitializer: adding missing LEFT to JOIN FETCH
- 02:37 PM Revision fabf7027 (cdmlib): fixing bug in matchesLevel method
- 02:37 PM Revision 89d58417 (cdmlib): adding missing sources
- 12:17 PM Revision a21bc8ed (cdm-webapp): initial commit
- 12:05 PM Revision ea4f846b (cdmlib): removed vaadin dependency
05/18/2015
- 05:59 PM feature request #4908: adding convert Team to Person and Person to Team to the bulk editor
- German translation for both converters is still missing.
- 12:14 PM feature request #4908 (Resolved): adding convert Team to Person and Person to Team to the bulk editor
- implemented in r23831
- 12:14 PM feature request #4908 (Closed): adding convert Team to Person and Person to Team to the bulk editor
- the functionality convert team to person and person to team should be available in the agent bulk editor.
relate... - 05:48 PM task #4911 (In Progress): improve performance of distributionInfoFor service
- currently the distributionInfoFor service call is the slowest request for a lot of portals to build up the taxon gene...
- 05:18 PM Revision b7830280 (taxeditor): minor
- 05:10 PM Revision e7e7198b (cdmlib): - added tests to ignore because other tests fail :-/
- 04:44 PM Revision 4738c160 (cdmlib): speed up of DistributionTree.orderAsTree() by factor 1.6
- 04:44 PM Revision f5051775 (cdmlib): setting source dependencies for m2e enviromnent
- 04:44 PM Revision e309a2b8 (cdmlib): adding method to get the intentifier from hibernate proxies
- 04:44 PM Revision f74ce766 (cdmlib): increasing the permGenSpace for profiling sessions
- 04:44 PM Revision e36ff7fd (cdmlib): performance improvement by 42% by using default initstrategy for composeDistributionInfoFor()
- 04:40 PM Revision 33463936 (cdmlib): - re-enabled and fixed ABCD import tests(#4910)
- 04:35 PM Revision 0200c616 (cdmlib): - added null check
- 04:34 PM Revision d56f5219 (cdmlib-apps): rename EuroMedVibrant activator
- 04:33 PM Revision 7662bd52 (cdmlib-apps): rename EuroMedVibrant activator
- 04:09 PM Revision 06ca4e16 (cdmlib): - improved name matching for NamedAreas (continents) in ABCD import (#4910)
- - added null check
- fixed ggbn extension check - 03:04 PM Revision a3182ec6 (taxeditor): - deproxy CDM entities to get correct class as part title of DetailsView
- 02:45 PM Revision 9ab081a8 (taxeditor): - show recordBasis for specimens as part title of DetailsView
- 01:03 PM Revision 40a272d6 (taxeditor): - simplified part title of DetailsView
- 12:16 PM feature request #4896 (Resolved): Bulkeditor: deduplication of objects of different type
- is implemented in r23831
- 11:59 AM Revision 635b598e (taxeditor): bulkeditor: merge of teams and persons and convert team to person and person to team
- 08:51 AM Revision 5174bd4c (cdmlib): - optimized name matching for terms in ABCD import
05/14/2015
05/13/2015
- 04:32 PM Revision 35619936 (cdm-dataportal): abrviated childlabel can be hidden, contribution to #4906: cyprus: Areas missing in advanced search distribution filter widget
- 04:24 PM Revision a783afbc (cdm-dataportal): sorting areas in natual order, contribution to #4906: cyprus: Areas missing in advanced search distribution filter widget
- 03:08 PM Revision d9a8f632 (taxeditor): - unified section headers for derivative details view
- - show selected element in part title of DetailsView
- 02:40 PM Revision 41c6dd13 (cdm-dataportal): better handling of area terms in case of mixed vocabularies
- 12:31 PM Revision 52371202 (cdm-dataportal): using recommended getTitle method
- 11:37 AM Revision b61dbf03 (taxeditor): - fixed filtering by specimen type (UNKNOWN = wild card)
- 11:16 AM Revision df751fbd (cdmlib): fixing further bean field property mapping probelm, contributes to #3841: resolve bean inconsistencies
- 11:15 AM Revision ad3b1993 (cdmlib): adding missing @Transient
- 11:07 AM Revision 2cc2ab44 (taxeditor): - added transient service methods
- 10:56 AM Revision 49e0f229 (cdmlib): - made service methods public
- - added java doc
- fixed typo - 10:07 AM Revision 62fa22eb (taxeditor): - when searching for a taxon also the indirectly associated specimens of the derivative hierarchy are shown
- 10:06 AM Revision 0898a368 (cdmlib): - added option to retrieve indirectly associated specimen
- - added service method to retrieve the completete derivative hierarchy for a given specimen
- added test
05/12/2015
- 05:18 PM Revision 6ace3b29 (cdmlib): fixing #4179 (improve performance of portal/taxon/{uuid}/media)
- 05:01 PM Revision b62d5268 (cdmlib): adding log4j.properties in user home to launcher
- 11:58 AM Revision 648bb157 (cdmlib): fixing #4903 (SQLGrammarException exception in description/namedAreasInUse)
- 11:07 AM Revision 1c45408b (cdmlib): adding forceSchemaUpdate to the cdmlib-remote-webapp launcher
- 10:47 AM Revision 742aad84 (cdmlib): - added config option to ignore already existing specimens during import
- - for ggbn import already existing specimens are searched and attached if associated to the dna unit
- refactored Ab... - 10:44 AM Revision efb18337 (cdmlib): - added significantIdentifer as search parameter to occurrenceService.findByTitle()
05/11/2015
- 05:59 PM Revision 86558972 (cdm-dataportal): setting new text for classification filter, solves #4872
- 03:08 PM Revision e494ec0c (cdm-dataportal): applying the fix for #4887 also to the zen SUBTHEME
- 02:57 PM Revision 7440e8d9 (cdm-vaadin): aligning with master branch
- Merge remote-tracking branch 'origin' into develop
- 02:46 PM Revision 17c8425f (taxeditor): - missing @Override
- 02:37 PM Revision 3042fbba (cdm-vaadin): reverted back to current version
- 02:33 PM Revision efb89126 (cdm-vaadin): reverted version to current
- 02:03 PM Revision b09c1f76 (cdmlib): - added modifying text to factual data label #4883
- 01:49 PM Revision 6be69f79 (taxeditor): minor
- 01:48 PM Revision dbde6b75 (taxeditor): natural order preferences
- 01:47 PM Revision f144593a (taxeditor): add dialog for the natural order preference
- 01:39 PM Revision 4633f830 (taxeditor): make the order of the taxon nodes editable
- 01:37 PM Revision a37e74f6 (cdmlib): make the taxonomic tree editable in natural order (see #3771), adding comparator
- 12:16 PM Revision 0fa9e660 (cdmlib): delete the embedded class UuidAndTitleCacheOfAcceptedTaxon
- 12:06 PM Revision a3395766 (cdmlib): privates for uuidAndTitleCache
- 11:04 AM Revision dcec2a45 (taxeditor): #4855 add MoveSynonymToAnotherAcceptedTaxonHandler and some clean up of the plugin.xml especially the delete
- 10:10 AM Revision 2ffe898f (cdm-vaadin): updating poms for 3.5.3-SNAPSHOT development
- 09:43 AM Revision 104a2316 (taxeditor): - added missing dependencies to feature
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